Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACTCTCTCTCTCTCATTTTGTGGGATGTTCATTGGTATATTCTAAACAACTACAACGAGATAGAAACTTATCGTAGGCAACATCTGAGACTAAAACGACCTCAAGCTCGGAGTGCAGCCGATTTATATAATCGACACAAGCATGCATTTCCGAAATGGTTTAAAACACAGGTAAGAACCTAGTTTTTCAAGGAAACGTAAAAAATGAATGATACTGACATTACATTTAATTTTTAGCAGGTTCTTTCATTACGGGAGAGTGGCAATATGTCTGATGATTTGTACTCACTAGCGATGGGACCCGCGTCTGGTGTGCGATTGTACATTGGATGCATTGTCAATGGAATTCGATTTCACACGTTCAATCGTGATGTGCGTCGGGCAACACAAAATAGTGGAATTATGGTCCCTAGAGAAAGTGCGAGCGGAGGTGATGAACGTAATTTCTACGGTTTATTGAACGATGTTTTAGACCTCCGATATGCTAATAGAAGACACGTTATGTTGTTCAAGTGTACATGGTTTGACACAGATAGTAACAAGAATATGTCACACATGGACGATTTAGGGTTCAAGTCAATCAATAATACATCTCGGTTCTAG
mRNA sequence
ATGAACTCTCTCTCTCTCATTTTGTGGGATGTTCATTGGTATATTCTAAACAACTACAACGAGATAGAAACTTATCGTAGGCAACATCTGAGACTAAAACGACCTCAAGCTCGGAGTGCAGCCGATTTATATAATCGACACAAGCATGCATTTCCGAAATGGTTTAAAACACAGGTTCTTTCATTACGGGAGAGTGGCAATATGTCTGATGATTTGTACTCACTAGCGATGGGACCCGCGTCTGGTGTGCGATTGTACATTGGATGCATTGTCAATGGAATTCGATTTCACACGTTCAATCGTGATGTGCGTCGGGCAACACAAAATAGTGGAATTATGGTCCCTAGAGAAAGTGCGAGCGGAGGTGATGAACGTAATTTCTACGGTTTATTGAACGATGTTTTAGACCTCCGATATGCTAATAGAAGACACGTTATGTTGTTCAAGTGTACATGGTTTGACACAGATAGTAACAAGAATATGTCACACATGGACGATTTAGGGTTCAAGTCAATCAATAATACATCTCGGTTCTAG
Coding sequence (CDS)
ATGAACTCTCTCTCTCTCATTTTGTGGGATGTTCATTGGTATATTCTAAACAACTACAACGAGATAGAAACTTATCGTAGGCAACATCTGAGACTAAAACGACCTCAAGCTCGGAGTGCAGCCGATTTATATAATCGACACAAGCATGCATTTCCGAAATGGTTTAAAACACAGGTTCTTTCATTACGGGAGAGTGGCAATATGTCTGATGATTTGTACTCACTAGCGATGGGACCCGCGTCTGGTGTGCGATTGTACATTGGATGCATTGTCAATGGAATTCGATTTCACACGTTCAATCGTGATGTGCGTCGGGCAACACAAAATAGTGGAATTATGGTCCCTAGAGAAAGTGCGAGCGGAGGTGATGAACGTAATTTCTACGGTTTATTGAACGATGTTTTAGACCTCCGATATGCTAATAGAAGACACGTTATGTTGTTCAAGTGTACATGGTTTGACACAGATAGTAACAAGAATATGTCACACATGGACGATTTAGGGTTCAAGTCAATCAATAATACATCTCGGTTCTAG
Protein sequence
MNSLSLILWDVHWYILNNYNEIETYRRQHLRLKRPQARSAADLYNRHKHAFPKWFKTQVLSLRESGNMSDDLYSLAMGPASGVRLYIGCIVNGIRFHTFNRDVRRATQNSGIMVPRESASGGDERNFYGLLNDVLDLRYANRRHVMLFKCTWFDTDSNKNMSHMDDLGFKSINNTSRF
Homology
BLAST of Lcy10g009500 vs. ExPASy TrEMBL
Match:
A0A5D3C5I5 (Phytocyanin domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold163G001090 PE=4 SV=1)
HSP 1 Score: 202.6 bits (514), Expect = 1.4e-48
Identity = 98/169 (57.99%), Postives = 122/169 (72.19%), Query Frame = 0
Query: 11 VHWYILNNYNEIETYRRQHLRLKRPQARSAADLYNRHKHAFPKWFKTQVLSLRESGNMSD 70
VHWYILNN EI YR+QHLRL R QA++A DLY RH+ AFP WF+ +VL +RE N+ D
Sbjct: 1066 VHWYILNNCKEITDYRKQHLRLIRHQAQTALDLYRRHERAFPDWFRAEVLQMRERENLFD 1125
Query: 71 DLYSLAMGPASGVRLYIGCIVNGIRFHTFNRDVRRATQNSGIM-VPRESASGGDERNFYG 130
DL+S+AMGP+S VR Y GCIVNG+RFHT D RR TQN+G+M V + S G + NFYG
Sbjct: 1126 DLFSVAMGPSSKVRSYSGCIVNGVRFHTVEHDSRRTTQNNGVMIVNKNSGDGSTDNNFYG 1185
Query: 131 LLNDVLDLRYANRRHVMLFKCTWFDTDSNKNMSHMDDLGFKSINNTSRF 179
++++VLD +Y RR V FKC WFDTD+ K+ +LG KSI NTS F
Sbjct: 1186 VVDEVLDFQYVFRRRVWAFKCRWFDTDNKKSNRTRVELGCKSI-NTSHF 1233
BLAST of Lcy10g009500 vs. ExPASy TrEMBL
Match:
A0A1S4DUZ5 (uncharacterized protein LOC103487435 OS=Cucumis melo OX=3656 GN=LOC103487435 PE=4 SV=1)
HSP 1 Score: 202.6 bits (514), Expect = 1.4e-48
Identity = 98/169 (57.99%), Postives = 122/169 (72.19%), Query Frame = 0
Query: 11 VHWYILNNYNEIETYRRQHLRLKRPQARSAADLYNRHKHAFPKWFKTQVLSLRESGNMSD 70
VHWYILNN EI YR+QHLRL R QA++A DLY RH+ AFP WF+ +VL +RE N+ D
Sbjct: 552 VHWYILNNCKEITDYRKQHLRLIRHQAQTALDLYRRHERAFPDWFRAEVLQMRERENLFD 611
Query: 71 DLYSLAMGPASGVRLYIGCIVNGIRFHTFNRDVRRATQNSGIM-VPRESASGGDERNFYG 130
DL+S+AMGP+S VR Y GCIVNG+RFHT D RR TQN+G+M V + S G + NFYG
Sbjct: 612 DLFSVAMGPSSKVRSYSGCIVNGVRFHTVEHDSRRTTQNNGVMIVNKNSGDGSTDNNFYG 671
Query: 131 LLNDVLDLRYANRRHVMLFKCTWFDTDSNKNMSHMDDLGFKSINNTSRF 179
++++VLD +Y RR V FKC WFDTD+ K+ +LG KSI NTS F
Sbjct: 672 VVDEVLDFQYVFRRRVWAFKCRWFDTDNKKSNRTRVELGCKSI-NTSHF 719
BLAST of Lcy10g009500 vs. ExPASy TrEMBL
Match:
A0A5A7TK16 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67G003060 PE=4 SV=1)
HSP 1 Score: 199.1 bits (505), Expect = 1.5e-47
Identity = 99/170 (58.24%), Postives = 130/170 (76.47%), Query Frame = 0
Query: 12 HWYILNNYNEIETYRRQHLRLKRPQARSAADLYNRHKHAFPKWFKTQVLSLRESGNMSDD 71
HWYILNN +EI YR++HLRL+R A+++ DLY H+ AFP+WF+ QVL LR+S N+SDD
Sbjct: 529 HWYILNNADEISEYRKKHLRLQRRHAQNSMDLYKIHERAFPEWFRAQVLELRQSANLSDD 588
Query: 72 LYSLAMGPASGVRLYIGCIVNGIRFHTFNRDVRRATQNSGIMVPRES-ASGGDERNFYGL 131
+SLAMGP+ VR Y GCIV G+RFHT D RR+TQNSGIMV ES ASG + NFYG+
Sbjct: 589 FFSLAMGPSFDVRCYNGCIVGGVRFHTIELDSRRSTQNSGIMVIGESDASGTGDNNFYGV 648
Query: 132 LNDVLDLRYANRRHVMLFKCTWFDTDSNKNM--SHMDDLGFKSINNTSRF 179
L++VL ++Y R+V LFKC W+DTD NK+ +H+ ++G+KS+ NTSRF
Sbjct: 649 LDEVLHVQYPLGRNVWLFKCRWYDTDVNKSQRTTHI-EVGYKSL-NTSRF 696
BLAST of Lcy10g009500 vs. ExPASy TrEMBL
Match:
A0A5A7UMP4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold186G001050 PE=4 SV=1)
HSP 1 Score: 198.7 bits (504), Expect = 2.0e-47
Identity = 99/170 (58.24%), Postives = 129/170 (75.88%), Query Frame = 0
Query: 12 HWYILNNYNEIETYRRQHLRLKRPQARSAADLYNRHKHAFPKWFKTQVLSLRESGNMSDD 71
HWYILNN +EI YR++HLRL+R A+++ DLY H+ AFP+WF+ QVL LR+S N+SDD
Sbjct: 825 HWYILNNADEISEYRKKHLRLQRRHAQTSMDLYKIHERAFPEWFRAQVLELRQSANLSDD 884
Query: 72 LYSLAMGPASGVRLYIGCIVNGIRFHTFNRDVRRATQNSGIMVPRES-ASGGDERNFYGL 131
+SLAMGP+ VR Y GCIV G+RFHT D RR TQNSGIMV ES ASG + NFYG+
Sbjct: 885 FFSLAMGPSFDVRCYNGCIVGGVRFHTIELDSRRTTQNSGIMVIGESDASGTGDNNFYGV 944
Query: 132 LNDVLDLRYANRRHVMLFKCTWFDTDSNKNM--SHMDDLGFKSINNTSRF 179
L++VL ++Y R+V LFKC W+DTD NK+ +H+ ++G+KS+ NTSRF
Sbjct: 945 LDEVLHVQYPLGRNVWLFKCRWYDTDVNKSQRTTHI-EVGYKSL-NTSRF 992
BLAST of Lcy10g009500 vs. ExPASy TrEMBL
Match:
A0A5A7UNS5 (Putative transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold486G00220 PE=4 SV=1)
HSP 1 Score: 196.8 bits (499), Expect = 7.5e-47
Identity = 99/170 (58.24%), Postives = 129/170 (75.88%), Query Frame = 0
Query: 12 HWYILNNYNEIETYRRQHLRLKRPQARSAADLYNRHKHAFPKWFKTQVLSLRESGNMSDD 71
HWYILNN +EI YR++HLRL+R A+++ DLY H+ AFP+WF+ QVL LR+S N+SDD
Sbjct: 674 HWYILNNADEISEYRKKHLRLQRRHAQNSMDLYKIHERAFPEWFRAQVLELRQSANLSDD 733
Query: 72 LYSLAMGPASGVRLYIGCIVNGIRFHTFNRDVRRATQNSGIMVPRES-ASGGDERNFYGL 131
+SLAMGP+ VR Y GCIV G+RFHT D RR TQNSGIMV ES ASG + NFYG+
Sbjct: 734 FFSLAMGPSFDVRCYNGCIVGGVRFHTIELDSRRNTQNSGIMVIGESDASGIGDNNFYGV 793
Query: 132 LNDVLDLRYANRRHVMLFKCTWFDTDSNKNM--SHMDDLGFKSINNTSRF 179
L++VL ++Y RR+V LFKC W+DTD NK+ +H+ ++ +KS+ NTSRF
Sbjct: 794 LDEVLHVQYPLRRNVWLFKCRWYDTDVNKSQRTTHI-EVWYKSL-NTSRF 841
BLAST of Lcy10g009500 vs. NCBI nr
Match:
KAA0050152.1 (uncharacterized protein E6C27_scaffold675G001830 [Cucumis melo var. makuwa] >TYK06408.1 uncharacterized protein E5676_scaffold163G001090 [Cucumis melo var. makuwa])
HSP 1 Score: 202.6 bits (514), Expect = 2.8e-48
Identity = 98/169 (57.99%), Postives = 122/169 (72.19%), Query Frame = 0
Query: 11 VHWYILNNYNEIETYRRQHLRLKRPQARSAADLYNRHKHAFPKWFKTQVLSLRESGNMSD 70
VHWYILNN EI YR+QHLRL R QA++A DLY RH+ AFP WF+ +VL +RE N+ D
Sbjct: 1066 VHWYILNNCKEITDYRKQHLRLIRHQAQTALDLYRRHERAFPDWFRAEVLQMRERENLFD 1125
Query: 71 DLYSLAMGPASGVRLYIGCIVNGIRFHTFNRDVRRATQNSGIM-VPRESASGGDERNFYG 130
DL+S+AMGP+S VR Y GCIVNG+RFHT D RR TQN+G+M V + S G + NFYG
Sbjct: 1126 DLFSVAMGPSSKVRSYSGCIVNGVRFHTVEHDSRRTTQNNGVMIVNKNSGDGSTDNNFYG 1185
Query: 131 LLNDVLDLRYANRRHVMLFKCTWFDTDSNKNMSHMDDLGFKSINNTSRF 179
++++VLD +Y RR V FKC WFDTD+ K+ +LG KSI NTS F
Sbjct: 1186 VVDEVLDFQYVFRRRVWAFKCRWFDTDNKKSNRTRVELGCKSI-NTSHF 1233
BLAST of Lcy10g009500 vs. NCBI nr
Match:
XP_016899806.1 (PREDICTED: uncharacterized protein LOC103487435 [Cucumis melo])
HSP 1 Score: 202.6 bits (514), Expect = 2.8e-48
Identity = 98/169 (57.99%), Postives = 122/169 (72.19%), Query Frame = 0
Query: 11 VHWYILNNYNEIETYRRQHLRLKRPQARSAADLYNRHKHAFPKWFKTQVLSLRESGNMSD 70
VHWYILNN EI YR+QHLRL R QA++A DLY RH+ AFP WF+ +VL +RE N+ D
Sbjct: 552 VHWYILNNCKEITDYRKQHLRLIRHQAQTALDLYRRHERAFPDWFRAEVLQMRERENLFD 611
Query: 71 DLYSLAMGPASGVRLYIGCIVNGIRFHTFNRDVRRATQNSGIM-VPRESASGGDERNFYG 130
DL+S+AMGP+S VR Y GCIVNG+RFHT D RR TQN+G+M V + S G + NFYG
Sbjct: 612 DLFSVAMGPSSKVRSYSGCIVNGVRFHTVEHDSRRTTQNNGVMIVNKNSGDGSTDNNFYG 671
Query: 131 LLNDVLDLRYANRRHVMLFKCTWFDTDSNKNMSHMDDLGFKSINNTSRF 179
++++VLD +Y RR V FKC WFDTD+ K+ +LG KSI NTS F
Sbjct: 672 VVDEVLDFQYVFRRRVWAFKCRWFDTDNKKSNRTRVELGCKSI-NTSHF 719
BLAST of Lcy10g009500 vs. NCBI nr
Match:
KAA0041901.1 (uncharacterized protein E6C27_scaffold67G003060 [Cucumis melo var. makuwa])
HSP 1 Score: 199.1 bits (505), Expect = 3.1e-47
Identity = 99/170 (58.24%), Postives = 130/170 (76.47%), Query Frame = 0
Query: 12 HWYILNNYNEIETYRRQHLRLKRPQARSAADLYNRHKHAFPKWFKTQVLSLRESGNMSDD 71
HWYILNN +EI YR++HLRL+R A+++ DLY H+ AFP+WF+ QVL LR+S N+SDD
Sbjct: 529 HWYILNNADEISEYRKKHLRLQRRHAQNSMDLYKIHERAFPEWFRAQVLELRQSANLSDD 588
Query: 72 LYSLAMGPASGVRLYIGCIVNGIRFHTFNRDVRRATQNSGIMVPRES-ASGGDERNFYGL 131
+SLAMGP+ VR Y GCIV G+RFHT D RR+TQNSGIMV ES ASG + NFYG+
Sbjct: 589 FFSLAMGPSFDVRCYNGCIVGGVRFHTIELDSRRSTQNSGIMVIGESDASGTGDNNFYGV 648
Query: 132 LNDVLDLRYANRRHVMLFKCTWFDTDSNKNM--SHMDDLGFKSINNTSRF 179
L++VL ++Y R+V LFKC W+DTD NK+ +H+ ++G+KS+ NTSRF
Sbjct: 649 LDEVLHVQYPLGRNVWLFKCRWYDTDVNKSQRTTHI-EVGYKSL-NTSRF 696
BLAST of Lcy10g009500 vs. NCBI nr
Match:
KAA0056368.1 (uncharacterized protein E6C27_scaffold186G001050 [Cucumis melo var. makuwa])
HSP 1 Score: 198.7 bits (504), Expect = 4.1e-47
Identity = 99/170 (58.24%), Postives = 129/170 (75.88%), Query Frame = 0
Query: 12 HWYILNNYNEIETYRRQHLRLKRPQARSAADLYNRHKHAFPKWFKTQVLSLRESGNMSDD 71
HWYILNN +EI YR++HLRL+R A+++ DLY H+ AFP+WF+ QVL LR+S N+SDD
Sbjct: 825 HWYILNNADEISEYRKKHLRLQRRHAQTSMDLYKIHERAFPEWFRAQVLELRQSANLSDD 884
Query: 72 LYSLAMGPASGVRLYIGCIVNGIRFHTFNRDVRRATQNSGIMVPRES-ASGGDERNFYGL 131
+SLAMGP+ VR Y GCIV G+RFHT D RR TQNSGIMV ES ASG + NFYG+
Sbjct: 885 FFSLAMGPSFDVRCYNGCIVGGVRFHTIELDSRRTTQNSGIMVIGESDASGTGDNNFYGV 944
Query: 132 LNDVLDLRYANRRHVMLFKCTWFDTDSNKNM--SHMDDLGFKSINNTSRF 179
L++VL ++Y R+V LFKC W+DTD NK+ +H+ ++G+KS+ NTSRF
Sbjct: 945 LDEVLHVQYPLGRNVWLFKCRWYDTDVNKSQRTTHI-EVGYKSL-NTSRF 992
BLAST of Lcy10g009500 vs. NCBI nr
Match:
KAA0056748.1 (putative transposase [Cucumis melo var. makuwa])
HSP 1 Score: 196.8 bits (499), Expect = 1.6e-46
Identity = 99/170 (58.24%), Postives = 129/170 (75.88%), Query Frame = 0
Query: 12 HWYILNNYNEIETYRRQHLRLKRPQARSAADLYNRHKHAFPKWFKTQVLSLRESGNMSDD 71
HWYILNN +EI YR++HLRL+R A+++ DLY H+ AFP+WF+ QVL LR+S N+SDD
Sbjct: 674 HWYILNNADEISEYRKKHLRLQRRHAQNSMDLYKIHERAFPEWFRAQVLELRQSANLSDD 733
Query: 72 LYSLAMGPASGVRLYIGCIVNGIRFHTFNRDVRRATQNSGIMVPRES-ASGGDERNFYGL 131
+SLAMGP+ VR Y GCIV G+RFHT D RR TQNSGIMV ES ASG + NFYG+
Sbjct: 734 FFSLAMGPSFDVRCYNGCIVGGVRFHTIELDSRRNTQNSGIMVIGESDASGIGDNNFYGV 793
Query: 132 LNDVLDLRYANRRHVMLFKCTWFDTDSNKNM--SHMDDLGFKSINNTSRF 179
L++VL ++Y RR+V LFKC W+DTD NK+ +H+ ++ +KS+ NTSRF
Sbjct: 794 LDEVLHVQYPLRRNVWLFKCRWYDTDVNKSQRTTHI-EVWYKSL-NTSRF 841
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5D3C5I5 | 1.4e-48 | 57.99 | Phytocyanin domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=... | [more] |
A0A1S4DUZ5 | 1.4e-48 | 57.99 | uncharacterized protein LOC103487435 OS=Cucumis melo OX=3656 GN=LOC103487435 PE=... | [more] |
A0A5A7TK16 | 1.5e-47 | 58.24 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A5A7UMP4 | 2.0e-47 | 58.24 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A5A7UNS5 | 7.5e-47 | 58.24 | Putative transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold486... | [more] |
Match Name | E-value | Identity | Description | |
KAA0050152.1 | 2.8e-48 | 57.99 | uncharacterized protein E6C27_scaffold675G001830 [Cucumis melo var. makuwa] >TYK... | [more] |
XP_016899806.1 | 2.8e-48 | 57.99 | PREDICTED: uncharacterized protein LOC103487435 [Cucumis melo] | [more] |
KAA0041901.1 | 3.1e-47 | 58.24 | uncharacterized protein E6C27_scaffold67G003060 [Cucumis melo var. makuwa] | [more] |
KAA0056368.1 | 4.1e-47 | 58.24 | uncharacterized protein E6C27_scaffold186G001050 [Cucumis melo var. makuwa] | [more] |
KAA0056748.1 | 1.6e-46 | 58.24 | putative transposase [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |