Lcy10g009500 (gene) Sponge gourd (P93075) v1

Overview
NameLcy10g009500
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionDUF4216 domain-containing protein
LocationChr10: 36299925 .. 36300530 (-)
RNA-Seq ExpressionLcy10g009500
SyntenyLcy10g009500
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACTCTCTCTCTCTCATTTTGTGGGATGTTCATTGGTATATTCTAAACAACTACAACGAGATAGAAACTTATCGTAGGCAACATCTGAGACTAAAACGACCTCAAGCTCGGAGTGCAGCCGATTTATATAATCGACACAAGCATGCATTTCCGAAATGGTTTAAAACACAGGTAAGAACCTAGTTTTTCAAGGAAACGTAAAAAATGAATGATACTGACATTACATTTAATTTTTAGCAGGTTCTTTCATTACGGGAGAGTGGCAATATGTCTGATGATTTGTACTCACTAGCGATGGGACCCGCGTCTGGTGTGCGATTGTACATTGGATGCATTGTCAATGGAATTCGATTTCACACGTTCAATCGTGATGTGCGTCGGGCAACACAAAATAGTGGAATTATGGTCCCTAGAGAAAGTGCGAGCGGAGGTGATGAACGTAATTTCTACGGTTTATTGAACGATGTTTTAGACCTCCGATATGCTAATAGAAGACACGTTATGTTGTTCAAGTGTACATGGTTTGACACAGATAGTAACAAGAATATGTCACACATGGACGATTTAGGGTTCAAGTCAATCAATAATACATCTCGGTTCTAG

mRNA sequence

ATGAACTCTCTCTCTCTCATTTTGTGGGATGTTCATTGGTATATTCTAAACAACTACAACGAGATAGAAACTTATCGTAGGCAACATCTGAGACTAAAACGACCTCAAGCTCGGAGTGCAGCCGATTTATATAATCGACACAAGCATGCATTTCCGAAATGGTTTAAAACACAGGTTCTTTCATTACGGGAGAGTGGCAATATGTCTGATGATTTGTACTCACTAGCGATGGGACCCGCGTCTGGTGTGCGATTGTACATTGGATGCATTGTCAATGGAATTCGATTTCACACGTTCAATCGTGATGTGCGTCGGGCAACACAAAATAGTGGAATTATGGTCCCTAGAGAAAGTGCGAGCGGAGGTGATGAACGTAATTTCTACGGTTTATTGAACGATGTTTTAGACCTCCGATATGCTAATAGAAGACACGTTATGTTGTTCAAGTGTACATGGTTTGACACAGATAGTAACAAGAATATGTCACACATGGACGATTTAGGGTTCAAGTCAATCAATAATACATCTCGGTTCTAG

Coding sequence (CDS)

ATGAACTCTCTCTCTCTCATTTTGTGGGATGTTCATTGGTATATTCTAAACAACTACAACGAGATAGAAACTTATCGTAGGCAACATCTGAGACTAAAACGACCTCAAGCTCGGAGTGCAGCCGATTTATATAATCGACACAAGCATGCATTTCCGAAATGGTTTAAAACACAGGTTCTTTCATTACGGGAGAGTGGCAATATGTCTGATGATTTGTACTCACTAGCGATGGGACCCGCGTCTGGTGTGCGATTGTACATTGGATGCATTGTCAATGGAATTCGATTTCACACGTTCAATCGTGATGTGCGTCGGGCAACACAAAATAGTGGAATTATGGTCCCTAGAGAAAGTGCGAGCGGAGGTGATGAACGTAATTTCTACGGTTTATTGAACGATGTTTTAGACCTCCGATATGCTAATAGAAGACACGTTATGTTGTTCAAGTGTACATGGTTTGACACAGATAGTAACAAGAATATGTCACACATGGACGATTTAGGGTTCAAGTCAATCAATAATACATCTCGGTTCTAG

Protein sequence

MNSLSLILWDVHWYILNNYNEIETYRRQHLRLKRPQARSAADLYNRHKHAFPKWFKTQVLSLRESGNMSDDLYSLAMGPASGVRLYIGCIVNGIRFHTFNRDVRRATQNSGIMVPRESASGGDERNFYGLLNDVLDLRYANRRHVMLFKCTWFDTDSNKNMSHMDDLGFKSINNTSRF
Homology
BLAST of Lcy10g009500 vs. ExPASy TrEMBL
Match: A0A5D3C5I5 (Phytocyanin domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold163G001090 PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 1.4e-48
Identity = 98/169 (57.99%), Postives = 122/169 (72.19%), Query Frame = 0

Query: 11   VHWYILNNYNEIETYRRQHLRLKRPQARSAADLYNRHKHAFPKWFKTQVLSLRESGNMSD 70
            VHWYILNN  EI  YR+QHLRL R QA++A DLY RH+ AFP WF+ +VL +RE  N+ D
Sbjct: 1066 VHWYILNNCKEITDYRKQHLRLIRHQAQTALDLYRRHERAFPDWFRAEVLQMRERENLFD 1125

Query: 71   DLYSLAMGPASGVRLYIGCIVNGIRFHTFNRDVRRATQNSGIM-VPRESASGGDERNFYG 130
            DL+S+AMGP+S VR Y GCIVNG+RFHT   D RR TQN+G+M V + S  G  + NFYG
Sbjct: 1126 DLFSVAMGPSSKVRSYSGCIVNGVRFHTVEHDSRRTTQNNGVMIVNKNSGDGSTDNNFYG 1185

Query: 131  LLNDVLDLRYANRRHVMLFKCTWFDTDSNKNMSHMDDLGFKSINNTSRF 179
            ++++VLD +Y  RR V  FKC WFDTD+ K+     +LG KSI NTS F
Sbjct: 1186 VVDEVLDFQYVFRRRVWAFKCRWFDTDNKKSNRTRVELGCKSI-NTSHF 1233

BLAST of Lcy10g009500 vs. ExPASy TrEMBL
Match: A0A1S4DUZ5 (uncharacterized protein LOC103487435 OS=Cucumis melo OX=3656 GN=LOC103487435 PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 1.4e-48
Identity = 98/169 (57.99%), Postives = 122/169 (72.19%), Query Frame = 0

Query: 11  VHWYILNNYNEIETYRRQHLRLKRPQARSAADLYNRHKHAFPKWFKTQVLSLRESGNMSD 70
           VHWYILNN  EI  YR+QHLRL R QA++A DLY RH+ AFP WF+ +VL +RE  N+ D
Sbjct: 552 VHWYILNNCKEITDYRKQHLRLIRHQAQTALDLYRRHERAFPDWFRAEVLQMRERENLFD 611

Query: 71  DLYSLAMGPASGVRLYIGCIVNGIRFHTFNRDVRRATQNSGIM-VPRESASGGDERNFYG 130
           DL+S+AMGP+S VR Y GCIVNG+RFHT   D RR TQN+G+M V + S  G  + NFYG
Sbjct: 612 DLFSVAMGPSSKVRSYSGCIVNGVRFHTVEHDSRRTTQNNGVMIVNKNSGDGSTDNNFYG 671

Query: 131 LLNDVLDLRYANRRHVMLFKCTWFDTDSNKNMSHMDDLGFKSINNTSRF 179
           ++++VLD +Y  RR V  FKC WFDTD+ K+     +LG KSI NTS F
Sbjct: 672 VVDEVLDFQYVFRRRVWAFKCRWFDTDNKKSNRTRVELGCKSI-NTSHF 719

BLAST of Lcy10g009500 vs. ExPASy TrEMBL
Match: A0A5A7TK16 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67G003060 PE=4 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 1.5e-47
Identity = 99/170 (58.24%), Postives = 130/170 (76.47%), Query Frame = 0

Query: 12  HWYILNNYNEIETYRRQHLRLKRPQARSAADLYNRHKHAFPKWFKTQVLSLRESGNMSDD 71
           HWYILNN +EI  YR++HLRL+R  A+++ DLY  H+ AFP+WF+ QVL LR+S N+SDD
Sbjct: 529 HWYILNNADEISEYRKKHLRLQRRHAQNSMDLYKIHERAFPEWFRAQVLELRQSANLSDD 588

Query: 72  LYSLAMGPASGVRLYIGCIVNGIRFHTFNRDVRRATQNSGIMVPRES-ASGGDERNFYGL 131
            +SLAMGP+  VR Y GCIV G+RFHT   D RR+TQNSGIMV  ES ASG  + NFYG+
Sbjct: 589 FFSLAMGPSFDVRCYNGCIVGGVRFHTIELDSRRSTQNSGIMVIGESDASGTGDNNFYGV 648

Query: 132 LNDVLDLRYANRRHVMLFKCTWFDTDSNKNM--SHMDDLGFKSINNTSRF 179
           L++VL ++Y   R+V LFKC W+DTD NK+   +H+ ++G+KS+ NTSRF
Sbjct: 649 LDEVLHVQYPLGRNVWLFKCRWYDTDVNKSQRTTHI-EVGYKSL-NTSRF 696

BLAST of Lcy10g009500 vs. ExPASy TrEMBL
Match: A0A5A7UMP4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold186G001050 PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 2.0e-47
Identity = 99/170 (58.24%), Postives = 129/170 (75.88%), Query Frame = 0

Query: 12  HWYILNNYNEIETYRRQHLRLKRPQARSAADLYNRHKHAFPKWFKTQVLSLRESGNMSDD 71
           HWYILNN +EI  YR++HLRL+R  A+++ DLY  H+ AFP+WF+ QVL LR+S N+SDD
Sbjct: 825 HWYILNNADEISEYRKKHLRLQRRHAQTSMDLYKIHERAFPEWFRAQVLELRQSANLSDD 884

Query: 72  LYSLAMGPASGVRLYIGCIVNGIRFHTFNRDVRRATQNSGIMVPRES-ASGGDERNFYGL 131
            +SLAMGP+  VR Y GCIV G+RFHT   D RR TQNSGIMV  ES ASG  + NFYG+
Sbjct: 885 FFSLAMGPSFDVRCYNGCIVGGVRFHTIELDSRRTTQNSGIMVIGESDASGTGDNNFYGV 944

Query: 132 LNDVLDLRYANRRHVMLFKCTWFDTDSNKNM--SHMDDLGFKSINNTSRF 179
           L++VL ++Y   R+V LFKC W+DTD NK+   +H+ ++G+KS+ NTSRF
Sbjct: 945 LDEVLHVQYPLGRNVWLFKCRWYDTDVNKSQRTTHI-EVGYKSL-NTSRF 992

BLAST of Lcy10g009500 vs. ExPASy TrEMBL
Match: A0A5A7UNS5 (Putative transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold486G00220 PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 7.5e-47
Identity = 99/170 (58.24%), Postives = 129/170 (75.88%), Query Frame = 0

Query: 12  HWYILNNYNEIETYRRQHLRLKRPQARSAADLYNRHKHAFPKWFKTQVLSLRESGNMSDD 71
           HWYILNN +EI  YR++HLRL+R  A+++ DLY  H+ AFP+WF+ QVL LR+S N+SDD
Sbjct: 674 HWYILNNADEISEYRKKHLRLQRRHAQNSMDLYKIHERAFPEWFRAQVLELRQSANLSDD 733

Query: 72  LYSLAMGPASGVRLYIGCIVNGIRFHTFNRDVRRATQNSGIMVPRES-ASGGDERNFYGL 131
            +SLAMGP+  VR Y GCIV G+RFHT   D RR TQNSGIMV  ES ASG  + NFYG+
Sbjct: 734 FFSLAMGPSFDVRCYNGCIVGGVRFHTIELDSRRNTQNSGIMVIGESDASGIGDNNFYGV 793

Query: 132 LNDVLDLRYANRRHVMLFKCTWFDTDSNKNM--SHMDDLGFKSINNTSRF 179
           L++VL ++Y  RR+V LFKC W+DTD NK+   +H+ ++ +KS+ NTSRF
Sbjct: 794 LDEVLHVQYPLRRNVWLFKCRWYDTDVNKSQRTTHI-EVWYKSL-NTSRF 841

BLAST of Lcy10g009500 vs. NCBI nr
Match: KAA0050152.1 (uncharacterized protein E6C27_scaffold675G001830 [Cucumis melo var. makuwa] >TYK06408.1 uncharacterized protein E5676_scaffold163G001090 [Cucumis melo var. makuwa])

HSP 1 Score: 202.6 bits (514), Expect = 2.8e-48
Identity = 98/169 (57.99%), Postives = 122/169 (72.19%), Query Frame = 0

Query: 11   VHWYILNNYNEIETYRRQHLRLKRPQARSAADLYNRHKHAFPKWFKTQVLSLRESGNMSD 70
            VHWYILNN  EI  YR+QHLRL R QA++A DLY RH+ AFP WF+ +VL +RE  N+ D
Sbjct: 1066 VHWYILNNCKEITDYRKQHLRLIRHQAQTALDLYRRHERAFPDWFRAEVLQMRERENLFD 1125

Query: 71   DLYSLAMGPASGVRLYIGCIVNGIRFHTFNRDVRRATQNSGIM-VPRESASGGDERNFYG 130
            DL+S+AMGP+S VR Y GCIVNG+RFHT   D RR TQN+G+M V + S  G  + NFYG
Sbjct: 1126 DLFSVAMGPSSKVRSYSGCIVNGVRFHTVEHDSRRTTQNNGVMIVNKNSGDGSTDNNFYG 1185

Query: 131  LLNDVLDLRYANRRHVMLFKCTWFDTDSNKNMSHMDDLGFKSINNTSRF 179
            ++++VLD +Y  RR V  FKC WFDTD+ K+     +LG KSI NTS F
Sbjct: 1186 VVDEVLDFQYVFRRRVWAFKCRWFDTDNKKSNRTRVELGCKSI-NTSHF 1233

BLAST of Lcy10g009500 vs. NCBI nr
Match: XP_016899806.1 (PREDICTED: uncharacterized protein LOC103487435 [Cucumis melo])

HSP 1 Score: 202.6 bits (514), Expect = 2.8e-48
Identity = 98/169 (57.99%), Postives = 122/169 (72.19%), Query Frame = 0

Query: 11  VHWYILNNYNEIETYRRQHLRLKRPQARSAADLYNRHKHAFPKWFKTQVLSLRESGNMSD 70
           VHWYILNN  EI  YR+QHLRL R QA++A DLY RH+ AFP WF+ +VL +RE  N+ D
Sbjct: 552 VHWYILNNCKEITDYRKQHLRLIRHQAQTALDLYRRHERAFPDWFRAEVLQMRERENLFD 611

Query: 71  DLYSLAMGPASGVRLYIGCIVNGIRFHTFNRDVRRATQNSGIM-VPRESASGGDERNFYG 130
           DL+S+AMGP+S VR Y GCIVNG+RFHT   D RR TQN+G+M V + S  G  + NFYG
Sbjct: 612 DLFSVAMGPSSKVRSYSGCIVNGVRFHTVEHDSRRTTQNNGVMIVNKNSGDGSTDNNFYG 671

Query: 131 LLNDVLDLRYANRRHVMLFKCTWFDTDSNKNMSHMDDLGFKSINNTSRF 179
           ++++VLD +Y  RR V  FKC WFDTD+ K+     +LG KSI NTS F
Sbjct: 672 VVDEVLDFQYVFRRRVWAFKCRWFDTDNKKSNRTRVELGCKSI-NTSHF 719

BLAST of Lcy10g009500 vs. NCBI nr
Match: KAA0041901.1 (uncharacterized protein E6C27_scaffold67G003060 [Cucumis melo var. makuwa])

HSP 1 Score: 199.1 bits (505), Expect = 3.1e-47
Identity = 99/170 (58.24%), Postives = 130/170 (76.47%), Query Frame = 0

Query: 12  HWYILNNYNEIETYRRQHLRLKRPQARSAADLYNRHKHAFPKWFKTQVLSLRESGNMSDD 71
           HWYILNN +EI  YR++HLRL+R  A+++ DLY  H+ AFP+WF+ QVL LR+S N+SDD
Sbjct: 529 HWYILNNADEISEYRKKHLRLQRRHAQNSMDLYKIHERAFPEWFRAQVLELRQSANLSDD 588

Query: 72  LYSLAMGPASGVRLYIGCIVNGIRFHTFNRDVRRATQNSGIMVPRES-ASGGDERNFYGL 131
            +SLAMGP+  VR Y GCIV G+RFHT   D RR+TQNSGIMV  ES ASG  + NFYG+
Sbjct: 589 FFSLAMGPSFDVRCYNGCIVGGVRFHTIELDSRRSTQNSGIMVIGESDASGTGDNNFYGV 648

Query: 132 LNDVLDLRYANRRHVMLFKCTWFDTDSNKNM--SHMDDLGFKSINNTSRF 179
           L++VL ++Y   R+V LFKC W+DTD NK+   +H+ ++G+KS+ NTSRF
Sbjct: 649 LDEVLHVQYPLGRNVWLFKCRWYDTDVNKSQRTTHI-EVGYKSL-NTSRF 696

BLAST of Lcy10g009500 vs. NCBI nr
Match: KAA0056368.1 (uncharacterized protein E6C27_scaffold186G001050 [Cucumis melo var. makuwa])

HSP 1 Score: 198.7 bits (504), Expect = 4.1e-47
Identity = 99/170 (58.24%), Postives = 129/170 (75.88%), Query Frame = 0

Query: 12  HWYILNNYNEIETYRRQHLRLKRPQARSAADLYNRHKHAFPKWFKTQVLSLRESGNMSDD 71
           HWYILNN +EI  YR++HLRL+R  A+++ DLY  H+ AFP+WF+ QVL LR+S N+SDD
Sbjct: 825 HWYILNNADEISEYRKKHLRLQRRHAQTSMDLYKIHERAFPEWFRAQVLELRQSANLSDD 884

Query: 72  LYSLAMGPASGVRLYIGCIVNGIRFHTFNRDVRRATQNSGIMVPRES-ASGGDERNFYGL 131
            +SLAMGP+  VR Y GCIV G+RFHT   D RR TQNSGIMV  ES ASG  + NFYG+
Sbjct: 885 FFSLAMGPSFDVRCYNGCIVGGVRFHTIELDSRRTTQNSGIMVIGESDASGTGDNNFYGV 944

Query: 132 LNDVLDLRYANRRHVMLFKCTWFDTDSNKNM--SHMDDLGFKSINNTSRF 179
           L++VL ++Y   R+V LFKC W+DTD NK+   +H+ ++G+KS+ NTSRF
Sbjct: 945 LDEVLHVQYPLGRNVWLFKCRWYDTDVNKSQRTTHI-EVGYKSL-NTSRF 992

BLAST of Lcy10g009500 vs. NCBI nr
Match: KAA0056748.1 (putative transposase [Cucumis melo var. makuwa])

HSP 1 Score: 196.8 bits (499), Expect = 1.6e-46
Identity = 99/170 (58.24%), Postives = 129/170 (75.88%), Query Frame = 0

Query: 12  HWYILNNYNEIETYRRQHLRLKRPQARSAADLYNRHKHAFPKWFKTQVLSLRESGNMSDD 71
           HWYILNN +EI  YR++HLRL+R  A+++ DLY  H+ AFP+WF+ QVL LR+S N+SDD
Sbjct: 674 HWYILNNADEISEYRKKHLRLQRRHAQNSMDLYKIHERAFPEWFRAQVLELRQSANLSDD 733

Query: 72  LYSLAMGPASGVRLYIGCIVNGIRFHTFNRDVRRATQNSGIMVPRES-ASGGDERNFYGL 131
            +SLAMGP+  VR Y GCIV G+RFHT   D RR TQNSGIMV  ES ASG  + NFYG+
Sbjct: 734 FFSLAMGPSFDVRCYNGCIVGGVRFHTIELDSRRNTQNSGIMVIGESDASGIGDNNFYGV 793

Query: 132 LNDVLDLRYANRRHVMLFKCTWFDTDSNKNM--SHMDDLGFKSINNTSRF 179
           L++VL ++Y  RR+V LFKC W+DTD NK+   +H+ ++ +KS+ NTSRF
Sbjct: 794 LDEVLHVQYPLRRNVWLFKCRWYDTDVNKSQRTTHI-EVWYKSL-NTSRF 841

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3C5I51.4e-4857.99Phytocyanin domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=... [more]
A0A1S4DUZ51.4e-4857.99uncharacterized protein LOC103487435 OS=Cucumis melo OX=3656 GN=LOC103487435 PE=... [more]
A0A5A7TK161.5e-4758.24Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7UMP42.0e-4758.24Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7UNS57.5e-4758.24Putative transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold486... [more]
Match NameE-valueIdentityDescription
KAA0050152.12.8e-4857.99uncharacterized protein E6C27_scaffold675G001830 [Cucumis melo var. makuwa] >TYK... [more]
XP_016899806.12.8e-4857.99PREDICTED: uncharacterized protein LOC103487435 [Cucumis melo][more]
KAA0041901.13.1e-4758.24uncharacterized protein E6C27_scaffold67G003060 [Cucumis melo var. makuwa][more]
KAA0056368.14.1e-4758.24uncharacterized protein E6C27_scaffold186G001050 [Cucumis melo var. makuwa][more]
KAA0056748.11.6e-4658.24putative transposase [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025312Domain of unknown function DUF4216PFAMPF13952DUF4216coord: 136..177
e-value: 1.9E-8
score: 34.5

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy10g009500.1Lcy10g009500.1mRNA