Lcy10g009040 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy10g009040
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	transcription factor DIVARICATA-like
Location	Chr10: 35493424 .. 35495460 (-)
RNA-Seq Expression	Lcy10g009040
Synteny	Lcy10g009040

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACCAAAATCAAAACAACTTCGATCCGTCTTCATCTGTTCCTCCTCATTGGTCGATCATTCAGCATCCCAATCACGATCCGGAGCAGCCGATGATGCCAACAGATCAGATGCCGCAGTTCGATCAATCCTCGTCATTCCCTTCCTATTCTCAGACCGATAATGTGGCGGTGTTTCAGCAGTCGCCGATGACAATAATGCCGCCACCGCCGCCGCAAAATCAACCGATTAGAATTGAGAGTAATGATAATGGTTCTAGGCCTCGGGGTTACAAAACGGAGGCGGAGATGATGGCGGAGAATTACCTGGAGGAATATTCGAGGTCTATTGATCCTCAGGATGAGTCAGATCTCCTGAACTTCGATCCGGTTCCGATGAATTTCTTGAACTTCGAGAATACTGCGATCACAGGCAATTCTAATTCTAATAATGATACGACGCAGTTTTTTACTCCTTCCGTTCACAGTAACTTTTCTGCTCCGGCTCCGATCGAGTGTACTGGTTGCCTTTCCGACGTCGTCAATTGTTGCTTCGGTAGGATGCGTCCTGCGCCCGTGAATTCTCTGCCGAGAGAACCGCCGCCGCGACGCGGTGGAGCTGCGACTAAGGGCGGAGCCAGCTCATCGCGGACCGCCAAGAATTGGAGCGAAAACGAGCACAAGTACGTGACAACGCAATACTCTTTTCTTTTTATTAAATAACCTATTTTTTTTTTGTTGGGTTTTAATGGAAAAGAAAAATTGAACGTTTATAAGTAAGACAAAATAAGAAAATAATTGTTTATTTCTTTATTTTCTTTACTCTCTTTCATTATTTGAGACTCACTCCTGAATATTAACCTATGATACTTCTGGTTTTTATTTTTATTATATATTTAAAAAAATTATGAGTAAATTTTCTTTTTTCTTCCTTGACACAACATTATGAGTAAGTTTTGAAAGCTATTCTAAATTGAAAATAGTTATTTGTGCTCATTAGATAGTGATTTGATTTTTTTTTCTTTTTGGTTTTTGAAATTATAATTAAGCTTATAAATCTTAATTACTCCCACTTATGAGATTTTTTTTTTTTTTTTTTGTGTTGTTATCTATTTTTTTACAAATGTTATCAAAATTATTCAAGTTAAATTTTGAAAACTAAAACAAGCAGGGTTTCTTGTTTGATTATCATTTGGGTTTTGAAAATTAAACTTATAAACACTATACTTTCACCTGTGAGATTTTTTTTTGTTTTCTTATCTACCTTTTATAAATGTTTTCAATATGTAAACCATATTTTGAAAACTAAAAATAAAAAAACAGTTTTTAAAACTCGTTTTGTTTTTTAAATTTGGTTAAGAATTCAAATGTTTTTTTGTAAGAAAGATGAAGATTATCGCAAAGTAATTGTGAGCGAAAACCAGCCCAAGTTTCAAAAACCAAAAAACTAAACATGAAAAACCAAGACCATAATAAAGAATTTGGGAAGAAACCATCATAAATTTGAAAAACAGAAAACTATAAAATGATTTTCATCTTTCTTAAAGATAATATTTAAATTGTTAGTCAAATCCCAAAAGTAATAAAAATAAAAATAAAAATAAGAATGACTTCTTCCTTTTTTTGAATCATACATACAATATTTGACTTATTTTCTTTGAATATTAATTCATGTAAATAGCTATTTTTTAAGAGTTGAAAAAATAAATAGACATTACTAACATTCAAAAACTAAATTTATATATAATTTGTGGGCACAGTTTATTTCTGGTGGGGATGGAGATATTTGGCAAGGGTGATTGGAAAAACATCGCAGGCAAAGTAGTGATTACAAAAACACACACACAAGTTGCAAGCCATGCCCAAAAGTACTTTGGTCGCCAGCAGTCATCACGAAAAGATCGGAAGAGATCGAGCATTCACGATATCAACACCGTCGATCCTATGTTATTGTTGCAGGTGTGTAACCGTCTAGGACGATCACTGGCAACGACAACGATGAACTATCCTCCACTGCTGCAACATTTTAGGCCTACAGATCACGAAGGGTTACCTTGA

mRNA sequence

ATGGACCAAAATCAAAACAACTTCGATCCGTCTTCATCTGTTCCTCCTCATTGGTCGATCATTCAGCATCCCAATCACGATCCGGAGCAGCCGATGATGCCAACAGATCAGATGCCGCAGTTCGATCAATCCTCGTCATTCCCTTCCTATTCTCAGACCGATAATGTGGCGGTGTTTCAGCAGTCGCCGATGACAATAATGCCGCCACCGCCGCCGCAAAATCAACCGATTAGAATTGAGAGTAATGATAATGGTTCTAGGCCTCGGGGTTACAAAACGGAGGCGGAGATGATGGCGGAGAATTACCTGGAGGAATATTCGAGGTCTATTGATCCTCAGGATGAGTCAGATCTCCTGAACTTCGATCCGGTTCCGATGAATTTCTTGAACTTCGAGAATACTGCGATCACAGGCAATTCTAATTCTAATAATGATACGACGCAGTTTTTTACTCCTTCCGTTCACAGTAACTTTTCTGCTCCGGCTCCGATCGAGTGTACTGGTTGCCTTTCCGACGTCGTCAATTGTTGCTTCGGTAGGATGCGTCCTGCGCCCGTGAATTCTCTGCCGAGAGAACCGCCGCCGCGACGCGGTGGAGCTGCGACTAAGGGCGGAGCCAGCTCATCGCGGACCGCCAAGAATTGGAGCGAAAACGAGCACAATTTATTTCTGGTGGGGATGGAGATATTTGGCAAGGGTGATTGGAAAAACATCGCAGGCAAAGTAGTGATTACAAAAACACACACACAAGTTGCAAGCCATGCCCAAAAGTACTTTGGTCGCCAGCAGTCATCACGAAAAGATCGGAAGAGATCGAGCATTCACGATATCAACACCGTCGATCCTATGTTATTGTTGCAGGTGTGTAACCGTCTAGGACGATCACTGGCAACGACAACGATGAACTATCCTCCACTGCTGCAACATTTTAGGCCTACAGATCACGAAGGGTTACCTTGA

Coding sequence (CDS)

ATGGACCAAAATCAAAACAACTTCGATCCGTCTTCATCTGTTCCTCCTCATTGGTCGATCATTCAGCATCCCAATCACGATCCGGAGCAGCCGATGATGCCAACAGATCAGATGCCGCAGTTCGATCAATCCTCGTCATTCCCTTCCTATTCTCAGACCGATAATGTGGCGGTGTTTCAGCAGTCGCCGATGACAATAATGCCGCCACCGCCGCCGCAAAATCAACCGATTAGAATTGAGAGTAATGATAATGGTTCTAGGCCTCGGGGTTACAAAACGGAGGCGGAGATGATGGCGGAGAATTACCTGGAGGAATATTCGAGGTCTATTGATCCTCAGGATGAGTCAGATCTCCTGAACTTCGATCCGGTTCCGATGAATTTCTTGAACTTCGAGAATACTGCGATCACAGGCAATTCTAATTCTAATAATGATACGACGCAGTTTTTTACTCCTTCCGTTCACAGTAACTTTTCTGCTCCGGCTCCGATCGAGTGTACTGGTTGCCTTTCCGACGTCGTCAATTGTTGCTTCGGTAGGATGCGTCCTGCGCCCGTGAATTCTCTGCCGAGAGAACCGCCGCCGCGACGCGGTGGAGCTGCGACTAAGGGCGGAGCCAGCTCATCGCGGACCGCCAAGAATTGGAGCGAAAACGAGCACAATTTATTTCTGGTGGGGATGGAGATATTTGGCAAGGGTGATTGGAAAAACATCGCAGGCAAAGTAGTGATTACAAAAACACACACACAAGTTGCAAGCCATGCCCAAAAGTACTTTGGTCGCCAGCAGTCATCACGAAAAGATCGGAAGAGATCGAGCATTCACGATATCAACACCGTCGATCCTATGTTATTGTTGCAGGTGTGTAACCGTCTAGGACGATCACTGGCAACGACAACGATGAACTATCCTCCACTGCTGCAACATTTTAGGCCTACAGATCACGAAGGGTTACCTTGA

Protein sequence

MDQNQNNFDPSSSVPPHWSIIQHPNHDPEQPMMPTDQMPQFDQSSSFPSYSQTDNVAVFQQSPMTIMPPPPPQNQPIRIESNDNGSRPRGYKTEAEMMAENYLEEYSRSIDPQDESDLLNFDPVPMNFLNFENTAITGNSNSNNDTTQFFTPSVHSNFSAPAPIECTGCLSDVVNCCFGRMRPAPVNSLPREPPPRRGGAATKGGASSSRTAKNWSENEHNLFLVGMEIFGKGDWKNIAGKVVITKTHTQVASHAQKYFGRQQSSRKDRKRSSIHDINTVDPMLLLQVCNRLGRSLATTTMNYPPLLQHFRPTDHEGLP

Homology

[Close]

BLAST of Lcy10g009040 vs. ExPASy Swiss-Prot
Match: Q8S9H7 (Transcription factor DIVARICATA OS=Antirrhinum majus OX=4151 GN=DIVARICATA PE=2 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 5.2e-19
Identity = 48/87 (55.17%), Postives = 62/87 (71.26%), Query Frame = 0


Query: 198 GGAATKGGASSSRTAKN---WSENEHNLFLVGMEIFGKGDWKNIAGKVVITKTHTQVASH 257
           GG  +  G  S +  K    W+E EH LFL+G++ +GKGDW+NI+   VIT+T TQVASH
Sbjct: 114 GGRKSSSGRPSEQERKKGVPWTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASH 173

Query: 258 AQKYFGRQQSSRKDRKRSSIHDINTVD 282
           AQKYF RQ S  KD++R+SIHDI TV+
Sbjct: 174 AQKYFIRQLSGGKDKRRASIHDITTVN 200

[Close]

BLAST of Lcy10g009040 vs. ExPASy Swiss-Prot
Match: B8A9B2 (Transcription factor MYBS1 OS=Oryza sativa subsp. indica OX=39946 GN=MYBS1 PE=3 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 7.4e-18
Identity = 48/96 (50.00%), Postives = 63/96 (65.62%), Query Frame = 0


Query: 191 REPPPRRGGAATKGGASSSRTAKN------WSENEHNLFLVGMEIFGKGDWKNIAGKVVI 250
           R    + GG    GG S S+  +       W+E EH LFL+G++ FGKGDW++I+   VI
Sbjct: 114 RRDERKGGGGGYDGGKSCSKAEQERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVI 173

Query: 251 TKTHTQVASHAQKYFGRQQSSRKDRKRSSIHDINTV 281
           ++T TQVASHAQKYF R  S  +DR+RSSIHDI +V
Sbjct: 174 SRTPTQVASHAQKYFIRLNSMNRDRRRSSIHDITSV 209

[Close]

BLAST of Lcy10g009040 vs. ExPASy Swiss-Prot
Match: Q8LH59 (Transcription factor MYBS1 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBS1 PE=1 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 7.4e-18
Identity = 48/96 (50.00%), Postives = 63/96 (65.62%), Query Frame = 0


Query: 191 REPPPRRGGAATKGGASSSRTAKN------WSENEHNLFLVGMEIFGKGDWKNIAGKVVI 250
           R    + GG    GG S S+  +       W+E EH LFL+G++ FGKGDW++I+   VI
Sbjct: 114 RRDERKGGGGGYDGGKSCSKAEQERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVI 173

Query: 251 TKTHTQVASHAQKYFGRQQSSRKDRKRSSIHDINTV 281
           ++T TQVASHAQKYF R  S  +DR+RSSIHDI +V
Sbjct: 174 SRTPTQVASHAQKYFIRLNSMNRDRRRSSIHDITSV 209

[Close]

BLAST of Lcy10g009040 vs. ExPASy Swiss-Prot
Match: Q9FNN6 (Transcription factor SRM1 OS=Arabidopsis thaliana OX=3702 GN=SRM1 PE=1 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 9.7e-18
Identity = 46/86 (53.49%), Postives = 61/86 (70.93%), Query Frame = 0


Query: 199 GAATKGGASSS----RTAKNWSENEHNLFLVGMEIFGKGDWKNIAGKVVITKTHTQVASH 258
           G + + G S S    R    W+E+EH LFL+G++ +GKGDW++I+   V+T+T TQVASH
Sbjct: 100 GESNQAGKSKSDQERRKGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASH 159

Query: 259 AQKYFGRQQSSRKDRKRSSIHDINTV 281
           AQKYF R  S  KDR+RSSIHDI +V
Sbjct: 160 AQKYFIRLNSMNKDRRRSSIHDITSV 185

[Close]

BLAST of Lcy10g009040 vs. ExPASy Swiss-Prot
Match: Q9LVS0 (Transcription factor KUA1 OS=Arabidopsis thaliana OX=3702 GN=KUA1 PE=1 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 5.0e-14
Identity = 39/76 (51.32%), Postives = 54/76 (71.05%), Query Frame = 0


Query: 205 GASSSRTAKN---WSENEHNLFLVGMEIFGKGDWKNIAGKVVITKTHTQVASHAQKYFGR 264
           G+SSSR  K    W+E EH +FL+G++  GKGDW+ I+   V T+T TQVASHAQKYF R
Sbjct: 85  GSSSSRERKKGTPWTEEEHRMFLLGLQKLGKGDWRGISRNYVTTRTPTQVASHAQKYFIR 144

Query: 265 QQSSRKDRKRSSIHDI 278
           Q +  + ++RSS+ D+
Sbjct: 145 QSNVSRRKRRSSLFDM 160

[Close]

BLAST of Lcy10g009040 vs. ExPASy TrEMBL
Match: V4U9T9 (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10016071mg PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 1.5e-21
Identity = 60/113 (53.10%), Postives = 75/113 (66.37%), Query Frame = 0


Query: 201 ATKGGASSSRTAKNWSENEHNLFLVGMEIFGKGDWKNIAGKVVITKTHTQVASHAQKYFG 260
           +TK G    +    W+E EH LFL+G++ FGKGDW++I+  VV+T+T TQVASHAQKYF 
Sbjct: 171 STKHGDPERKKGTPWTEEEHKLFLIGLKKFGKGDWRSISRNVVVTRTPTQVASHAQKYFL 230

Query: 261 RQQSSRKDRKRSSIHDINTVD-PMLLLQVCNRLGRSLATTTMNYPPLLQHFRP 313
           RQ S +K+RKRSSIHDI TVD P + L V      S   T    PP+LQ F P
Sbjct: 231 RQTSVKKERKRSSIHDITTVDNPSVGLPVDQNWISSPGGTGPQQPPVLQQFHP 283

[Close]

BLAST of Lcy10g009040 vs. ExPASy TrEMBL
Match: A0A2H5PNP1 (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_153140 PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 1.5e-21
Identity = 60/113 (53.10%), Postives = 75/113 (66.37%), Query Frame = 0


Query: 201 ATKGGASSSRTAKNWSENEHNLFLVGMEIFGKGDWKNIAGKVVITKTHTQVASHAQKYFG 260
           +TK G    +    W+E EH LFL+G++ FGKGDW++I+  VV+T+T TQVASHAQKYF 
Sbjct: 171 STKHGDPERKKGTPWTEEEHKLFLIGLKKFGKGDWRSISRNVVVTRTPTQVASHAQKYFL 230

Query: 261 RQQSSRKDRKRSSIHDINTVD-PMLLLQVCNRLGRSLATTTMNYPPLLQHFRP 313
           RQ S +K+RKRSSIHDI TVD P + L V      S   T    PP+LQ F P
Sbjct: 231 RQTSVKKERKRSSIHDITTVDNPSVGLPVDQNWISSPGGTGPQQPPVLQQFHP 283

[Close]

BLAST of Lcy10g009040 vs. ExPASy TrEMBL
Match: A0A6J1KMG9 (transcription factor DIVARICATA-like OS=Cucurbita maxima OX=3661 GN=LOC111497033 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 3.4e-21
Identity = 65/151 (43.05%), Postives = 88/151 (58.28%), Query Frame = 0


Query: 170 LSDVVNCCFGRMR-PAPVNSLPREPPPRRGGAATKGGASSSRTAKNWSENEHNLFLVGME 229
           +SDV N   GR+  P   +      P R         AS  +  K W++ EH LFL+G++
Sbjct: 73  VSDVQNIDSGRVELPNYADESLLSSPERESPGQLPEKASERKKGKPWTKKEHQLFLLGLK 132

Query: 230 IFGKGDWKNIAGKVVITKTHTQVASHAQKYFGRQQSSRKDRKRSSIHDINTVDPMLLLQV 289
            FGKGDW++I+  VVIT+T TQVASHAQKYF RQ+S++KDRKRSSIHDI TV+  L+  V
Sbjct: 133 KFGKGDWRSISRNVVITRTPTQVASHAQKYFLRQESAKKDRKRSSIHDITTVECNLVTAV 192

Query: 290 CNRLGRSLATTTMNYPPLLQHFRPTDHEGLP 320
                  L+  ++ + P      P  H+  P
Sbjct: 193 AATSEGQLSIFSLTHSPSPSFPLPLPHQFSP 223

[Close]

BLAST of Lcy10g009040 vs. ExPASy TrEMBL
Match: A0A6J1HGW8 (transcription factor DIVARICATA-like OS=Cucurbita moschata OX=3662 GN=LOC111463444 PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 9.8e-21
Identity = 64/151 (42.38%), Postives = 87/151 (57.62%), Query Frame = 0


Query: 170 LSDVVNCCFGRMR-PAPVNSLPREPPPRRGGAATKGGASSSRTAKNWSENEHNLFLVGME 229
           +SDV     GR+  P   +      P R         AS  +  K W++ EH LFL+G++
Sbjct: 73  VSDVQKIDSGRVELPNYADESLSSSPERESPCQLPEKASERKKGKPWTKKEHQLFLLGLK 132

Query: 230 IFGKGDWKNIAGKVVITKTHTQVASHAQKYFGRQQSSRKDRKRSSIHDINTVDPMLLLQV 289
            FGKGDW++I+  VVIT+T TQVASHAQKYF RQ+S++KDRKRSSIHDI TV+  L+  V
Sbjct: 133 KFGKGDWRSISRNVVITRTPTQVASHAQKYFLRQESAKKDRKRSSIHDITTVEGNLVTAV 192

Query: 290 CNRLGRSLATTTMNYPPLLQHFRPTDHEGLP 320
                  L+  ++ + P      P  H+  P
Sbjct: 193 AATSQGQLSIFSLTHSPSPSFPLPLTHQFSP 223

[Close]

BLAST of Lcy10g009040 vs. ExPASy TrEMBL
Match: A0A6A6KZV3 (Uncharacterized protein OS=Hevea brasiliensis OX=3981 GN=GH714_007619 PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 1.3e-20
Identity = 56/117 (47.86%), Postives = 72/117 (61.54%), Query Frame = 0


Query: 199 GAATKGGASSSRTAKNWSENEHNLFLVGMEIFGKGDWKNIAGKVVITKTHTQVASHAQKY 258
           G  TK G +  +    W+E EH  FL+G+  FGKGDW++I+  VV+T+T TQVASHAQKY
Sbjct: 86  GKKTKLGEAERKKGTPWTEEEHRKFLIGLRRFGKGDWRSISRNVVVTRTPTQVASHAQKY 145

Query: 259 FGRQQSSRKDRKRSSIHDINTVDPMLLLQVCNRLGRSLATTTMNYPPLLQHFRPTDH 316
           F RQ + +K+RKRSSIHDI TVD  L+    N+          N P +LQ     DH
Sbjct: 146 FLRQNAVKKERKRSSIHDITTVDSNLVPVPANKNWNPPLGAPANQPSVLQEMPQADH 202

[Close]

BLAST of Lcy10g009040 vs. NCBI nr
Match: XP_023522314.1 (transcription factor SRM1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 136.0 bits (341), Expect = 5.8e-28
Identity = 81/162 (50.00%), Postives = 97/162 (59.88%), Query Frame = 0


Query: 149 FFTPSVHSNFS----APAPIECTGCLSDVVNCCFGRMRPAPVNSLPREPPPRRGGAATKG 208
           F  PS ++N S    AP P+E TG LSDV+N C    R                 AA  G
Sbjct: 3   FCAPSTYNNLSPLALAPTPMESTGFLSDVINFCSNNTRHVV--------------AANNG 62

Query: 209 GAS-SSRTAKNWSENEHNLFLVGMEIFGKGDWKNIAGKVVITKTHTQVASHAQKYFGRQQ 268
             S SS+T   W+ +EH LFLVGM IFG G+WK+IA KVV+TKTH QVASHAQK+  RQQ
Sbjct: 63  RVSQSSKTRIIWTIDEHKLFLVGMAIFGSGNWKSIANKVVLTKTHIQVASHAQKFSTRQQ 122

Query: 269 SSRKDRKRSSIHDINTVDPMLLLQVCNRLGRSLATTTMNYPP 306
             ++ RKR SIHDI+TVDP LL +V  RL     T T + PP
Sbjct: 123 IPKEQRKRKSIHDIDTVDPELLSEVYARLESQPETRTRSRPP 150

[Close]

BLAST of Lcy10g009040 vs. NCBI nr
Match: XP_006445756.2 (transcription factor SRM1 [Citrus clementina] >XP_006485458.1 transcription factor SRM1 [Citrus sinensis])

HSP 1 Score: 113.6 bits (283), Expect = 3.1e-21
Identity = 60/113 (53.10%), Postives = 75/113 (66.37%), Query Frame = 0


Query: 201 ATKGGASSSRTAKNWSENEHNLFLVGMEIFGKGDWKNIAGKVVITKTHTQVASHAQKYFG 260
           +TK G    +    W+E EH LFL+G++ FGKGDW++I+  VV+T+T TQVASHAQKYF 
Sbjct: 104 STKHGDPERKKGTPWTEEEHKLFLIGLKKFGKGDWRSISRNVVVTRTPTQVASHAQKYFL 163

Query: 261 RQQSSRKDRKRSSIHDINTVD-PMLLLQVCNRLGRSLATTTMNYPPLLQHFRP 313
           RQ S +K+RKRSSIHDI TVD P + L V      S   T    PP+LQ F P
Sbjct: 164 RQTSVKKERKRSSIHDITTVDNPSVGLPVDQNWISSPGGTGPQQPPVLQQFHP 216

[Close]

BLAST of Lcy10g009040 vs. NCBI nr
Match: ESR58996.1 (hypothetical protein CICLE_v10016071mg [Citrus clementina] >GAY53984.1 hypothetical protein CUMW_153140 [Citrus unshiu])

HSP 1 Score: 113.6 bits (283), Expect = 3.1e-21
Identity = 60/113 (53.10%), Postives = 75/113 (66.37%), Query Frame = 0


Query: 201 ATKGGASSSRTAKNWSENEHNLFLVGMEIFGKGDWKNIAGKVVITKTHTQVASHAQKYFG 260
           +TK G    +    W+E EH LFL+G++ FGKGDW++I+  VV+T+T TQVASHAQKYF 
Sbjct: 171 STKHGDPERKKGTPWTEEEHKLFLIGLKKFGKGDWRSISRNVVVTRTPTQVASHAQKYFL 230

Query: 261 RQQSSRKDRKRSSIHDINTVD-PMLLLQVCNRLGRSLATTTMNYPPLLQHFRP 313
           RQ S +K+RKRSSIHDI TVD P + L V      S   T    PP+LQ F P
Sbjct: 231 RQTSVKKERKRSSIHDITTVDNPSVGLPVDQNWISSPGGTGPQQPPVLQQFHP 283

[Close]

BLAST of Lcy10g009040 vs. NCBI nr
Match: XP_023003417.1 (transcription factor DIVARICATA-like [Cucurbita maxima])

HSP 1 Score: 112.5 bits (280), Expect = 6.9e-21
Identity = 65/151 (43.05%), Postives = 88/151 (58.28%), Query Frame = 0


Query: 170 LSDVVNCCFGRMR-PAPVNSLPREPPPRRGGAATKGGASSSRTAKNWSENEHNLFLVGME 229
           +SDV N   GR+  P   +      P R         AS  +  K W++ EH LFL+G++
Sbjct: 73  VSDVQNIDSGRVELPNYADESLLSSPERESPGQLPEKASERKKGKPWTKKEHQLFLLGLK 132

Query: 230 IFGKGDWKNIAGKVVITKTHTQVASHAQKYFGRQQSSRKDRKRSSIHDINTVDPMLLLQV 289
            FGKGDW++I+  VVIT+T TQVASHAQKYF RQ+S++KDRKRSSIHDI TV+  L+  V
Sbjct: 133 KFGKGDWRSISRNVVITRTPTQVASHAQKYFLRQESAKKDRKRSSIHDITTVECNLVTAV 192

Query: 290 CNRLGRSLATTTMNYPPLLQHFRPTDHEGLP 320
                  L+  ++ + P      P  H+  P
Sbjct: 193 AATSEGQLSIFSLTHSPSPSFPLPLPHQFSP 223

[Close]

BLAST of Lcy10g009040 vs. NCBI nr
Match: XP_022963148.1 (transcription factor DIVARICATA-like [Cucurbita moschata])

HSP 1 Score: 110.9 bits (276), Expect = 2.0e-20
Identity = 64/151 (42.38%), Postives = 87/151 (57.62%), Query Frame = 0


Query: 170 LSDVVNCCFGRMR-PAPVNSLPREPPPRRGGAATKGGASSSRTAKNWSENEHNLFLVGME 229
           +SDV     GR+  P   +      P R         AS  +  K W++ EH LFL+G++
Sbjct: 73  VSDVQKIDSGRVELPNYADESLSSSPERESPCQLPEKASERKKGKPWTKKEHQLFLLGLK 132

Query: 230 IFGKGDWKNIAGKVVITKTHTQVASHAQKYFGRQQSSRKDRKRSSIHDINTVDPMLLLQV 289
            FGKGDW++I+  VVIT+T TQVASHAQKYF RQ+S++KDRKRSSIHDI TV+  L+  V
Sbjct: 133 KFGKGDWRSISRNVVITRTPTQVASHAQKYFLRQESAKKDRKRSSIHDITTVEGNLVTAV 192

Query: 290 CNRLGRSLATTTMNYPPLLQHFRPTDHEGLP 320
                  L+  ++ + P      P  H+  P
Sbjct: 193 AATSQGQLSIFSLTHSPSPSFPLPLTHQFSP 223

[Close]

BLAST of Lcy10g009040 vs. TAIR 10
Match: AT5G04760.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 107.5 bits (267), Expect = 2.1e-23
Identity = 51/89 (57.30%), Postives = 66/89 (74.16%), Query Frame = 0


Query: 202 TKGGASSSRTAKNWSENEHNLFLVGMEIFGKGDWKNIAGKVVITKTHTQVASHAQKYFGR 261
           +K G S  +    W+ENEH LFL+G++ +GKGDW++I+  VV+T+T TQVASHAQKYF R
Sbjct: 88  SKHGESERKRGTPWTENEHKLFLIGLKRYGKGDWRSISRNVVVTRTPTQVASHAQKYFLR 147

Query: 262 QQSSRKDRKRSSIHDINTVDPMLLLQVCN 291
           Q S +K+RKRSSIHDI TVD  L +   N
Sbjct: 148 QNSVKKERKRSSIHDITTVDATLAMPGSN 176

[Close]

BLAST of Lcy10g009040 vs. TAIR 10
Match: AT5G58900.1 (Homeodomain-like transcriptional regulator )

HSP 1 Score: 95.1 bits (235), Expect = 1.1e-19
Identity = 43/67 (64.18%), Postives = 55/67 (82.09%), Query Frame = 0


Query: 215 WSENEHNLFLVGMEIFGKGDWKNIAGKVVITKTHTQVASHAQKYFGRQQSSRKDRKRSSI 274
           W+E EH LFL+G++ +GKGDW+NI+   VIT+T TQVASHAQKYF RQ S  KD++R+SI
Sbjct: 143 WTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQLSGGKDKRRASI 202

Query: 275 HDINTVD 282
           HDI TV+
Sbjct: 203 HDITTVN 209

[Close]

BLAST of Lcy10g009040 vs. TAIR 10
Match: AT1G49010.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 93.6 bits (231), Expect = 3.1e-19
Identity = 50/102 (49.02%), Postives = 68/102 (66.67%), Query Frame = 0


Query: 188 SLPREPPPRRGG-AATKGGASSSRTAKN-------WSENEHNLFLVGMEIFGKGDWKNIA 247
           S  ++P P   G +++ GG S    A+        W+E EH LFL+G++ FGKGDW++I+
Sbjct: 101 SSEKKPNPGTSGISSSNGGRSGGSRAEQERRKGIPWTEEEHRLFLLGLDKFGKGDWRSIS 160

Query: 248 GKVVITKTHTQVASHAQKYFGRQQSSRKDRKRSSIHDINTVD 282
              VI++T TQVASHAQKYF R  S  +DR+RSSIHDI TV+
Sbjct: 161 RNFVISRTPTQVASHAQKYFIRLNSMNRDRRRSSIHDITTVN 202

[Close]

BLAST of Lcy10g009040 vs. TAIR 10
Match: AT2G38090.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 92.4 bits (228), Expect = 6.9e-19
Identity = 44/83 (53.01%), Postives = 58/83 (69.88%), Query Frame = 0


Query: 199 GAATKGGASSSRTAKNWSENEHNLFLVGMEIFGKGDWKNIAGKVVITKTHTQVASHAQKY 258
           G+A +      +    W+E EH  FL+G++ +GKGDW+NIA   V T+T TQVASHAQKY
Sbjct: 127 GSAARTAEHERKKGVPWTEEEHRQFLMGLKKYGKGDWRNIARNFVTTRTPTQVASHAQKY 186

Query: 259 FGRQQSSRKDRKRSSIHDINTVD 282
           F RQ +  KD++RSSIHDI TV+
Sbjct: 187 FIRQVNGGKDKRRSSIHDITTVN 209

[Close]

BLAST of Lcy10g009040 vs. TAIR 10
Match: AT5G08520.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 92.4 bits (228), Expect = 6.9e-19
Identity = 46/86 (53.49%), Postives = 61/86 (70.93%), Query Frame = 0


Query: 199 GAATKGGASSS----RTAKNWSENEHNLFLVGMEIFGKGDWKNIAGKVVITKTHTQVASH 258
           G + + G S S    R    W+E+EH LFL+G++ +GKGDW++I+   V+T+T TQVASH
Sbjct: 100 GESNQAGKSKSDQERRKGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASH 159

Query: 259 AQKYFGRQQSSRKDRKRSSIHDINTV 281
           AQKYF R  S  KDR+RSSIHDI +V
Sbjct: 160 AQKYFIRLNSMNKDRRRSSIHDITSV 185

The following BLAST results are available for this feature:

BLAST of Lcy10g009040 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8S9H7	5.2e-19	55.17	Transcription factor DIVARICATA OS=Antirrhinum majus OX=4151 GN=DIVARICATA PE=2 ...	[more]
B8A9B2	7.4e-18	50.00	Transcription factor MYBS1 OS=Oryza sativa subsp. indica OX=39946 GN=MYBS1 PE=3 ...	[more]
Q8LH59	7.4e-18	50.00	Transcription factor MYBS1 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBS1 PE=...	[more]
Q9FNN6	9.7e-18	53.49	Transcription factor SRM1 OS=Arabidopsis thaliana OX=3702 GN=SRM1 PE=1 SV=1	[more]
Q9LVS0	5.0e-14	51.32	Transcription factor KUA1 OS=Arabidopsis thaliana OX=3702 GN=KUA1 PE=1 SV=1	[more]

BLAST of Lcy10g009040 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
V4U9T9	1.5e-21	53.10	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10016071mg PE=4 ...	[more]
A0A2H5PNP1	1.5e-21	53.10	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_153140 PE=4 SV=1	[more]
A0A6J1KMG9	3.4e-21	43.05	transcription factor DIVARICATA-like OS=Cucurbita maxima OX=3661 GN=LOC111497033...	[more]
A0A6J1HGW8	9.8e-21	42.38	transcription factor DIVARICATA-like OS=Cucurbita moschata OX=3662 GN=LOC1114634...	[more]
A0A6A6KZV3	1.3e-20	47.86	Uncharacterized protein OS=Hevea brasiliensis OX=3981 GN=GH714_007619 PE=4 SV=1	[more]

BLAST of Lcy10g009040 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023522314.1	5.8e-28	50.00	transcription factor SRM1-like [Cucurbita pepo subsp. pepo]	[more]
XP_006445756.2	3.1e-21	53.10	transcription factor SRM1 [Citrus clementina] >XP_006485458.1 transcription fact...	[more]
ESR58996.1	3.1e-21	53.10	hypothetical protein CICLE_v10016071mg [Citrus clementina] >GAY53984.1 hypotheti...	[more]
XP_023003417.1	6.9e-21	43.05	transcription factor DIVARICATA-like [Cucurbita maxima]	[more]
XP_022963148.1	2.0e-20	42.38	transcription factor DIVARICATA-like [Cucurbita moschata]	[more]

BLAST of Lcy10g009040 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G04760.1	2.1e-23	57.30	Duplicated homeodomain-like superfamily protein	[more]
AT5G58900.1	1.1e-19	64.18	Homeodomain-like transcriptional regulator	[more]
AT1G49010.1	3.1e-19	49.02	Duplicated homeodomain-like superfamily protein	[more]
AT2G38090.1	6.9e-19	53.01	Duplicated homeodomain-like superfamily protein	[more]
AT5G08520.1	6.9e-19	53.49	Duplicated homeodomain-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 211..261 e-value: 3.2E-5 score: 33.3
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 207..259 score: 6.167592
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 214..259 e-value: 4.66393E-6 score: 41.0218
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 213..258 e-value: 5.3E-8 score: 32.9
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 214..263 score: 12.940909
None	No IPR available	GENE3D	1.10.10.60		coord: 213..264 e-value: 3.2E-14 score: 54.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 261..275
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..90
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 184..213
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 36..62
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..19
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 253..275
None	No IPR available	PANTHER	PTHR44042:SF41	DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED	coord: 205..281
IPR006447	Myb domain, plants	TIGRFAM	TIGR01557	TIGR01557	coord: 214..261 e-value: 6.6E-13 score: 46.8
IPR043363	Transcription factor DIVARICATA-like	PANTHER	PTHR44042	DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED	coord: 205..281
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 209..263

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy10g009040.1	Lcy10g009040.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003677	DNA binding