Lcy10g008940 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACGCCGAAGACATTTTGGCTATTCCATTGAGTAATAGGAATAACAAGGATGAAATCTATTGAAGCGGAGAGGCAAAAGGGGTGTTTAGTGTTAAAAGTGCATACCACATAGCTACAAACGTTCAGAAAGCTAGCGAGGCCTCTGAATCCGGGATAAATTCTCAAAAGAACAGATGGAGGTCCATTTGGGATCTTAACATCATTCCAAGAGCAAAAATTGGCCTCTGGAAAATTATAAAAAACCTTATCCCCTCTAAACAAAATCTATTACAAAGAGGAATGGACATTAACCAAGTTTGTGACTTGTGCAGATGTGCAAAAGAAAGCCCAGACCACTTATTTTGGAGGTGCAAGAAGGTAAGGAAAATATGGGAAAGGTTTTTCCCCAATCTTACAAAAACTATACTGTCTTGCAGGCCAGGGATGGATATGGGAGATGCGTGGGAGATTATATTCAAGCATCACAGTAAAGAAGAATGGGAGAGAATAGGCATCATCATTTGGACGATTTGGAATTTTAGGAACCAAGTAGCAGTAAACAAGCAAAATCCAGAATAAGAGCAGTTATACTAGTGGATTCAAAAGAATTTGGAAGATCAACGAAAATGTACCTCGCCAAATCTTTCGGAGATTCTTCTGGAGAGCCTTTGGAATCACGATAGGTGGACCCCTCCCCCCCCCCCCCCCCCCCGAAATTTGCTGAAAATAAATTCGGATGCCTCCTAGAATGAAGCCACTGGCATTGGAGGAGTCGGTTGGATCACCCGCGATTCTTCAGGATCTCTGGTTCAAGCGGGATACAAAAGGCTAAATCGAAAATGGAACATTAAACTTCTCGAATTGGCTGTGATTAAGGAAGGTTTGAACTCTTACCTCGCGAGCGAGCACTCTAGAAATTCTGCTCTAATTTTGGAAGCTGATGCCCTAGAAGTTATCAAAGCCCTGACTTGCGAAGGTTACGACATTTCTGAAGCCAAGGCGTTTTTGATTGATATTGAACATCTGGCGGCAAGAGTGGGAGTTGTTTCCTTTGTGAAATGCCCAAGAGCGGGCAATCAAGTGACACATTCCCTTGCGCGTGCAGCGGCGGGCTTCCCTCCGGTGTCTTCTCCGTCAATTGTTGATGCCGATGGAATTTTTGAGCTTTCTTTCCCTTCCATGCTGGAAGAAGCTTTATTTTGTAGGGATGATGATATCCCCGGTTGGTTAACCTCTTTAATTGAAGAGGATATTGTTGCAACTAACTCTTATCAGTTTTAA ATGGACGCCGAAGACATTTTGGCTATTCCATTGAATGTGCAAAAGAAAGCCCAGACCACTTATTTTGGAGGTGCAAGAAGGCCAGGGATGGATATGGGAGATGCGTGGGAGATTATATTCAAGCATCACAGTAAAGAAGAATGGGAGAGAATAGGCATCATCATTTGGACGATTTGGAATTTTAGGAACCAAGTAGCAAATGAAGCCACTGGCATTGGAGGAGTCGGTTGGATCACCCGCGATTCTTCAGGATCTCTGGTTCAAGCGGGATACAAAAGGCTAAATCGAAAATGGAACATTAAACTTCTCGAATTGGCTGTGATTAAGGAAGGTTTGAACTCTTACCTCGCGAGCGAGCACTCTAGAAATTCTGCTCTAATTTTGGAAGCTGATGCCCTAGAAGTTATCAAAGCCCTGACTTGCGAAGGTTACGACATTTCTGAAGCCAAGGCGTTTTTGATTGATATTGAACATCTGGCGGCAAGAGTGGGAGTTGTTTCCTTTGTGAAATGCCCAAGAGCGGGCAATCAAGTGACACATTCCCTTGCGCGTGCAGCGGCGGGCTTCCCTCCGGTGTCTTCTCCGTCAATTGTTGATGCCGATGGAATTTTTGAGCTTTCTTTCCCTTCCATGCTGGAAGAAGCTTTATTTTGTAGGGATGATGATATCCCCGGTTGGTTAACCTCTTTAATTGAAGAGGATATTGTTGCAACTAACTCTTATCAGTTTTAA ATGGACGCCGAAGACATTTTGGCTATTCCATTGAATGTGCAAAAGAAAGCCCAGACCACTTATTTTGGAGGTGCAAGAAGGCCAGGGATGGATATGGGAGATGCGTGGGAGATTATATTCAAGCATCACAGTAAAGAAGAATGGGAGAGAATAGGCATCATCATTTGGACGATTTGGAATTTTAGGAACCAAGTAGCAAATGAAGCCACTGGCATTGGAGGAGTCGGTTGGATCACCCGCGATTCTTCAGGATCTCTGGTTCAAGCGGGATACAAAAGGCTAAATCGAAAATGGAACATTAAACTTCTCGAATTGGCTGTGATTAAGGAAGGTTTGAACTCTTACCTCGCGAGCGAGCACTCTAGAAATTCTGCTCTAATTTTGGAAGCTGATGCCCTAGAAGTTATCAAAGCCCTGACTTGCGAAGGTTACGACATTTCTGAAGCCAAGGCGTTTTTGATTGATATTGAACATCTGGCGGCAAGAGTGGGAGTTGTTTCCTTTGTGAAATGCCCAAGAGCGGGCAATCAAGTGACACATTCCCTTGCGCGTGCAGCGGCGGGCTTCCCTCCGGTGTCTTCTCCGTCAATTGTTGATGCCGATGGAATTTTTGAGCTTTCTTTCCCTTCCATGCTGGAAGAAGCTTTATTTTGTAGGGATGATGATATCCCCGGTTGGTTAACCTCTTTAATTGAAGAGGATATTGTTGCAACTAACTCTTATCAGTTTTAA MDAEDILAIPLNVQKKAQTTYFGGARRPGMDMGDAWEIIFKHHSKEEWERIGIIIWTIWNFRNQVANEATGIGGVGWITRDSSGSLVQAGYKRLNRKWNIKLLELAVIKEGLNSYLASEHSRNSALILEADALEVIKALTCEGYDISEAKAFLIDIEHLAARVGVVSFVKCPRAGNQVTHSLARAAAGFPPVSSPSIVDADGIFELSFPSMLEEALFCRDDDIPGWLTSLIEEDIVATNSYQF Homology
BLAST of Lcy10g008940 vs. ExPASy TrEMBL
Match: A0A7C9CLE4 (RNase H domain-containing protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 1.2e-07 Identity = 41/127 (32.28%), Postives = 63/127 (49.61%), Query Frame = 0
BLAST of Lcy10g008940 vs. ExPASy TrEMBL
Match: A0A6J1CP26 (uncharacterized protein LOC111013412 OS=Momordica charantia OX=3673 GN=LOC111013412 PE=4 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 1.6e-07 Identity = 45/129 (34.88%), Postives = 65/129 (50.39%), Query Frame = 0
BLAST of Lcy10g008940 vs. ExPASy TrEMBL
Match: A0A803NZB5 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 1.6e-07 Identity = 49/155 (31.61%), Postives = 74/155 (47.74%), Query Frame = 0
BLAST of Lcy10g008940 vs. ExPASy TrEMBL
Match: A0A803Q3C1 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 2.1e-07 Identity = 68/261 (26.05%), Postives = 101/261 (38.70%), Query Frame = 0
BLAST of Lcy10g008940 vs. ExPASy TrEMBL
Match: A0A6J1DSV1 (uncharacterized protein LOC111023608 OS=Momordica charantia OX=3673 GN=LOC111023608 PE=4 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 1.4e-06 Identity = 45/135 (33.33%), Postives = 65/135 (48.15%), Query Frame = 0
BLAST of Lcy10g008940 vs. NCBI nr
Match: XP_022143535.1 (uncharacterized protein LOC111013412 [Momordica charantia]) HSP 1 Score: 66.6 bits (161), Expect = 3.3e-07 Identity = 45/129 (34.88%), Postives = 65/129 (50.39%), Query Frame = 0
BLAST of Lcy10g008940 vs. NCBI nr
Match: XP_022156777.1 (uncharacterized protein LOC111023608 [Momordica charantia]) HSP 1 Score: 63.5 bits (153), Expect = 2.8e-06 Identity = 45/135 (33.33%), Postives = 65/135 (48.15%), Query Frame = 0
BLAST of Lcy10g008940 vs. NCBI nr
Match: XP_022155262.1 (uncharacterized protein LOC111022403 [Momordica charantia]) HSP 1 Score: 62.4 bits (150), Expect = 6.3e-06 Identity = 45/145 (31.03%), Postives = 75/145 (51.72%), Query Frame = 0
BLAST of Lcy10g008940 vs. NCBI nr
Match: XP_021808158.1 (uncharacterized protein LOC110751913 [Prunus avium]) HSP 1 Score: 60.8 bits (146), Expect = 1.8e-05 Identity = 38/111 (34.23%), Postives = 61/111 (54.95%), Query Frame = 0
BLAST of Lcy10g008940 vs. NCBI nr
Match: XP_030509250.1 (uncharacterized protein LOC115723928 [Cannabis sativa]) HSP 1 Score: 60.1 bits (144), Expect = 3.1e-05 Identity = 48/154 (31.17%), Postives = 75/154 (48.70%), Query Frame = 0
BLAST of Lcy10g008940 vs. TAIR 10
Match: AT2G34320.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein ) HSP 1 Score: 49.3 bits (116), Expect = 5.1e-06 Identity = 34/116 (29.31%), Postives = 56/116 (48.28%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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