Lcy10g008740 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy10g008740
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	30S ribosomal protein S1
Location	Chr10: 34905313 .. 34913823 (-)
RNA-Seq Expression	Lcy10g008740
Synteny	Lcy10g008740

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTTTGCGTCACGCAAATAACCGATCGGATTTGCAGCAGTAAACAGTTGGTGGCTTTCCATTTGGAGCCCAATCCGAATGCTTTCCCACTACCCTCCTCCCCGCCATTTCCTTCTCTCTCAACTCTCAGCATGCCACTCTTTGCTGCAACGCTCGGATCCCTCTCTGCTCATTCCTTTCTCTCGCTCTTCGCCTCCACCGATGCTTCAACCTCCTCCTTTTTTACCCTAAAATCTTCCTCTAAACGCCCTTCCACCTTCGCCGCCAGAGTTTCCCTCTCCGGAAAACCGGAGCCCATTGCCGGAGTTCTAGACAGTTCGCCTCCGTCGCCGGAATCCGTTCGTCGTGCTCGGGTGAGTACATTGTTCATCCCTTCTTTCTTTCAATTGAAGAACTGGGTTCTTCTCGTAGAAAAGTATAGTCGGTTTGCTCTCTAAAAGAATCACTCTAGACTCAACTCTAGTGTTTTCTATTATGTGGGAACTTCAGCGTACTTTACTGTTAACATTTCAAGTTACGAGTTTGCTGAATTTGTATTCTTGTGCGAAGTATTGTTCCCCAATCCTGAAGGATTAAGGGTTAGAGAATTTTGAGAGGGTGTGACGCAGAGGGGAACTGGGGGAGGAGAAAAACTTAGTGTATGGCAAACATAACTCAATTGGTTAAGACAAACCTCTTCGACCAAAAAGGTTAGAGGATGGAATTCTCACCCCTACATGTTGAACTCAAAAAATTAACAAAGAAAGGTATAGCAGAATGACTAACTCTGCTACAAATATATTATACAAGACAATCGAAAAGGAAAGATAGTAGAAGAAAAGTGCTACATTTCATCATTCCCAACAAGTGAACAGGGCATAGGGAGGACTGACACTTAGTGTCAAACTCAGAACCTAAGGGAGTTGTCAGCCCATCAGAAAGCTGGTTGTTGAGAAGACCTTTATGAATGATGTATTAATCTATTTCTATGTGTTTGGTTCAGTTTTGCAAGATTGAATTTGCTGTCGAGAAGGTGGCACTGATATTATTGTGTAGAAGTAGAGGTTGTGCTGGAAATGTGAGACCAGATTCAGGAAGTAATGTTTCAACCCAAATGAGCTTAGTTTAAAAGTAGCATTAGCCTTACAATACCCGTATTCAGTCCAATAATGGGGCCAAAGTCACTGCTGCTAAGTCTCTAAGTTGATATCAGGTAAACTAGCCCCATGCACATGTTTAGTAAATAATGAAGAATTTTAAGACTTTGTTAAAGGAACACCAAGAGTTGGCCGAACATTTTAGATACTTCAGAATACGTTTTACTACTTGCCAGATGTATGGTGGTGGGAGTGGGGAGATATTGGCATATCTTAGTTAGCACAATGATCATAGAATAAGTTCTAAAGCATCACCATGCTCTTATGAAGAAAGGTCAGCTAGATGCTCATCAGCCTGTAAAGATAATGGTTGACTGCCTGCCAAAGGGATAGCAATTTGTTTGCTCTCAAAGATGTGAGACTGTTAATGTGTTTCTGTTTAGATAAACGTTCAGAACTTTCTGACAACTTGAATACCCAAGAAATAGGAAATGTGTTCAACATTTTTCAAAGATAAAAGTTCATTAAGGGATGAAAGGAAAGTACTAAAATAGAGAGTGATTACCTCCAGTCACTAAGAGCATGTTTGAGGTACAGTTTTTGAAATAGTTTTATATTTTGGTTTGAATAACTGGTGTTTAAGAGCTATAACTGGATGACTTGTAAAGCATCAGGAAAAAAAAAAGGTTTAGATTATTGTGAGTTTGAAGGCACTATTTGCAAGGCAAAATTTTCTTAAGAAGAACAACTTTGTGTTGTTCTAGAAAACAAGCCATCCATAAAAACAAGCAAAAGGAAAATAAAATTTAGAAAATAGTTCTCTAAACATGTTTTAACTGAAATTGTGTTAGCAAAATAGAAAATTGTTATTTAAAAAAAGCTCCCAAATATCTCTAACTGTTTTCTAAACAATTTTTTTTTTAATCTTTTGAAATACAAATTCAATGAAGTCACATTTGAATTATTGTTTTCTATGAGTTCCTTTTTCTTATTTTGCTTTGGTATGTTCTCATCAATGACCTATTTTTTTAGTATCAATTAATTTACTCTCCTCAAAATCACAGGTTATGTATAAAAATTTTAATATGCATAATAACCTTTAAAACATCATTCAATCATAATTCTCCAAATGGTTTTGTTATTTCCTATCAAAAAGACGTTTTGAAAACAAAGTCAAGAAATTGTGTAAACAATTTCCAAAACAAGCCTTGAATATCATCCACATATATAAGGAAAATTACTGTGTTTGACTTCTTTTGTAAATAAAACATGGAGGCTATTTGTCTTAGAGATTTTAAATTCTGAATTTTTTAAATGAGAAACAAGCTTTTCAATGATAAATGAAAAGGGAACTCCCAACTTGATGATTAGCTGCTTATTTTAGTCAATGTACACTATGACTTTGTTTGAAACTACATAAAGCCTTATTAAGCTAGGGGTTGCTCCATGTATATAACTTCAAGAGAATCTCCATGAAGAGAACAATTCAAATAGTTGTTAGCTTGGGCTTGATAAACGGGCTAAAGGTCTTGAGTGGTACATTCAAAGTGTATGTATGAAGCAGCCATTGGTAACAAGGCAAGATTTTGGCACTCATTTCCATCAGTGACTAGAGTTTGGGATGGTAAAATCATTTGCACTCAACTTTTCTGCTGTTTGGAGCAGGGTACTAGAAAGTAGGTTTTGTTTTTCATCACAGCTGGTATTATATTTCCATTCAACTCTTCCACTGAGGGCATTGAATTGCAGCCTTATAGTTTTGTTGTTCAACCATGCAATATCAAGGGCTAAAGATGATGTCTTGGGTTCAAAAGTTCCATCTTTTAGCTTATCATGATTGGATGGATGTTACGTGGGAGCATGTCAGGTAAGGAGGATAAAGATGTAGTAGGAGAGGCTATTGCCATGGTAGGAGGTGACGAGACAGGTTGTTGTGATTGGTGAGGAGTTGTGATTATCCGTCGGTTTTTGTCATTAATTATTGGAGCCTCTATCTGTAGTTTTTTTTTTTTTTTTTCCTGTCTTTCTGTCAACACTGTTGATTCGGATTGTTTTTTGTGGCTCTTATTTTGTTCTTTCATTCATGTTAATGAAAGTTGACTTCTTATCCCAAAAATGATGCACAGTAGGAGAATAGTTCAACACAAGGGAGTTGAGTCATGCAATTTATTTTAAGAAAAATAATTTAACAAACCTAACATGTGTAACTAAATAATAGGTACAAGAAATAACCAGCTTTACTGTTATAAAAACAAGGCAACTTTAAAGGAATGGTAGTACAAGAGAAGTGTTGCATTCTACCAAATGCTTTACTTTCTTCTTTGTAGATTGAGTTGCCGAGATCTGACAATGATCATAAATGCAGCTCGTTAGTATTTAAAACAGTTATATTGGTCTTGGGCATGTTTAATTTGGAATTTGCTAGAACCAATTCAGCATTTCCCATGATTTTCTATAACTATTGTTAAACTCTTATAATCTAATACTTGGTTTCTGCAAAGAAGTAGAGATCTGCTGATTGGAAGGCAGCGAGGGAATACCTTGATGGTGGATTTATCTACGAGGGAAGGATTGAAGGTTCAAACGCTGGAGGTTTACTTGTCCGATTTTATTCTCTTGTGGGGTTTCTTCCATTTCCTCAATTGAGCCCGTCTCATTCATGTAAAGGTACAAGTTTTTTTAATCCTTTGTGATATATTTTGAATTTTGCCATAAAGTTCCCCTGATAACATGTCCTATATTACTTTTATTCCAAAGTAGAATGGACAGTGGAATAAATCCTGGTTCTGAAGTAAGATTATTTGGAAAAATTACACTTCCCTTTTTACTCAATGGTCTTTCCTTGGGCTGAATGGTGTGCAGATGAAGTCGGTAGTTTACCTAATAATGACTTATATTGCTTGAGGTAGATGTGTTTCAAACTTCTAACATGCTTCCTCCCTCCCATTCCCTTCTGAATTTCTTGCAGAACCATACAAGAGTATCCAAGATATTGCAAAAAGCTTAATTGGTTCGCTTATACCAGTGAAGGTAAATAGCTTCTACAGTTGCCCATAATTTTAATCATTTACAGTTTTGAAAGCGTTTCTTCTAGTTAACTGAAGGCTGTTGTTATCTCTATATACTTCGCCACTCCCTAGATATATTGCTGAAATAAATTAGCAACGTTGGTGTTCAACATGAACAAACTAGGTCACATGTCAAATATGTGTTTAACACACCAAAATAAAACTCTAGTTTTCATTTTTTATCCTTTAATTTTTTGTTGGGAGGTGTAGGGATAGACCCAAAGGAGGAGACAAATTATAGAAGGTTTGTTTTTAGCAGTGTTAGTGTCCGATAATGAACACACTCAGTCACTTGCCAAACACCAACCGTTGTCTAGGAGGAAGCAAAGTACTCTACAAGTACAACTATGAATCAATTTGAGGCTTGCTATATGTGTCTTTCTGTAACAAAAATATATTTTGTATCCACAATCATTCTGATTAAAAGATTTGAAGTCATCAAAGTTGGTTTAGGGTTGCAAGCTATGTATCTCAATGAAAAATGCATATGCTACATAGATGTTAATGTGGGGAAGTGAGACATATAAAAGAATTGGTGCTTGATATGGTGGGACAAAATCAGTTATATTATTGCTTTCATTTCACCTATTTCTTAAAGGTTTGTCAATAATTTATTCCCTTTACTGTTACCTCTTTCAAATCTAACTTTATATCTGACATGATCATAGCTTGTGACAGAGATGTACCATATTACATTTATTCATAAAGTGAAATAGAGAAAACTGTAATATAATCGTTTATGAAGGAAGTGAGGGAAAAAGTTAGGAGTCTCTTACATGTAGGTGATCTAGTTGCTTGTGAATATGATGGAAATGAGGGAAAAAGTTAGGACTCTCTTCCATGTGGCTAAGCTAGTTCTTTCATCATTTGTATTCATATTTAACCGTCTCTGCTTTTGAAATATTTAGGTGAGGATACGTTAAAGTTTTAAACCCTGTCTTATTTTGTTAATACAGATTGCTTATTTTCTAGGTTATCCAAGCAGATGAGAGAAACAAGAAATTGATATTTTCAGAGAAGGAAGCTGCGTGGTCAAAGTTTTCGGAGCAAGTTAGTGTGGGAGAGGTTTATGAAGCTAGAGTTGGCTCTGTGGAGGATTATGGTGCCTTTGTACATTTACGTTTCTCCGATGGTAATATTCTGGATTTTGTTAATAATCTTATTCGCTGATGTATTTAGAAAACAGTTACCACTTATTTTCCAAACTTCTGCAGGTCTTTATCATCTTACTGGGCTAGTACATGTATCAGAAGTTTCATGGGATCTAGTTCAGGATGTAAGAGACATCTTAAGTGAGGGTGACGAAGTGAGGGTGAAAGTTATTAATGTTGATAGGCAAGTTCTTTCAGATTCCTTTTTATTACCAGCTAATTTGCACTTTCCAGGAAAAATCTGTTATTTCAAGTATTTCTATCTATTATAAAAAATACACTGGGCAATTATTGTATAGAAGTATTTTATTTGCTGCTTTTAACTTTTCCAATATTTTATCAAAATATTTTCTTAAATATTTGGATGCCGGAAAATACATGATGAAGTTGGTAATATCTAAGACTTAACTTTTGATTACAAATACTTGTACTGTACACTACTGTTATTTCATATTTATAATTTAAGCTGATTGTTAGTTTAACTTCTATTTTGTTAAATAAATGAAATGTTTGGTTTCTTATTCAAATTTATTATGTTATTTAATATCTGTACAGATTTATGAAATAAGATAAATATGCAATTTTCCGCCACTGACATAACTTTATGTAAAAGTCAAGGGTGTTTAAATCAAGAACTCAAAATGCTTAAAATAAAAACAAGGAGCTTAAACTTATTTTTTTTTTCCAATTATAGACAATTCAATAATCTGAGTGTTGTGGTGTGATGCAAATGATAAGCTCAATCATATTCAGCCTAAGTTTGCTAGCGGGTTAGTTACAGTTGTTCCTGTTTGTTGTGCTGTAACAAGATATATATATAGGAATGTTATTAGAGTATTAGAAGGGTATATTGGTAATTAGCTAGGAGAGTTTGTTATGGCATTTGGTTATAAACAGAGGGGGTAGAAACAGAGGGGGCTTGAGAGAGATCTCAAGAGGGAAGAGTGCAAGTAACTCGAATGACATGTTTATCTTGTAAGTTCTTTACCTTTTATATTGCAATACATTGTAGTTTTGTTTGGTTCCTATCACAATTCTTGGGCCAAACCACTAAAAAATCTTGCATGTTCCTCTGTTGTTTATTTTCTTTTTCTTAATCTTTGTATTGTTCCTTCTTGATTCTGGTTAAAACTGTTCTATGCTTATGATAGACCTCCATTTTGCTTGGCCTTTGTAAGAAGAGGGGAGAGGGTACAGGTGGGGTTGAGATATGTTAAATGGGAATATTGATCTTTGTTTGCATAGGCCTCACGAAAGCAGTTAGAGGCAGGGTTTTGGTTGTGAATTGTGATAGATGGGGAAATTAGTGAGGAAGCTGGGGGTAGAGGTCATTAGGGGAAAGAGTGAGAATACAGAACGTGGGAAATTAGAGGAGTCACAAGGAGAGCTGAAGACTCCTAAATCCCTGCCCCATATAGTTATGAATGAGATTGCTTCTGATCCTTCGTTAACGAAATACAATCTGTTTTACTCTGTTATGCAATTTAGCCAAAGGCGACGGTTGATTTTGTTAATTTTGCAAAAGGTTAAGAAAATGAAACACAAGGAAAAAGTAATTGATAGATTTGGTAAATTTATTAATTTATATCCACTTAAACTTTTACTCTTTGTCCGTTGCCCTGTATTTCAGTGTTGCCATGCTGAGTTTGTCTTATTGATTTTATGCAGGGAAAAGTCCAGGATCACACTGTCAATTAAACAACTTGAGGAAGATCCACTCTTGGAAACATTGGATAAAGTTATACCGCAGGTTTGTGAAACAGTATTGTACGCATTTAGTCAACCTTCTCAACTACTCTCATCTTCTACCTGAGCTTTAGCTATATGAACATCATAATTAACAGGATGGTTCTGCTGAACCTGATTCTTTCGGACCTAGAAGTGACAGTGAAATTATACCACTTCCTGGACTTGAAACAATATTTGAAGAGCTACTGCAGGAAGATGGGTATGTTACTACTTTTAGCTTGACATATTGAGGGTTATTTCTGAAAATGCTAAAAACTAGAATTGTTGGAATGAAAATAATGTATGAACACTGTCAAAAAACATTAATGATAACAACAATGTATGGGCACTGTCTAAAAAGATTAATGATAACAACAATGTACGAGCATCAACAGTACTCATATGCTTTGACTTGTTTTGAGTTTTTGAGTTTCAACTTTTGTGTTTCTTATTATGTCTACCTCAAAAGCTAGCTTCTAGAACATTAGGATGCAGACAATTAGGACTCGGGTAATGTGATGGACATACTAAATATCCTTAAAAAGTACAGACAAAGTAATGTTACACACACACAAGGGAGACACAGGCATGTTACGGTGACATGCTAATATCATTTTTTTTATATTTATATATGTTTATGGTTCAATATTGAGATGAATTGGCTAACACTGAACAAACTTAAGGAGCTTCTCTAGGACTTTCTCCCTTTCTTTCCCTCCATTGATAAGCTTTGTTAGTTTTTTAGTCGTTGGTAGGGGTTGTATTGTCAGATGTCACTTCAAAAGTTATCTTGACCTTGAGTTAGGAGTATGATCTTAATTTGGCTAGTTTGAATATCAGTATAGAAGATGTACGTGTCAACCGACAAGGATTTGAGAAGCGGGTGGTTTCACAAGACCTTCAACTTTGGCTATCAAATGTAAGTTGCTTGGTTACTAGGATGTGGGGTTAGTCATTTGCTTCAATTTCTCACCTCTCATCTCACTGTTACTGTAGGCACCTCCCATTGAAAAGAAGTTCACTCTCCTTGCTCGTGCTGGGAGGCAGGTAGTTCTATCTCCTTCACACATGCACAAGCACATGCACATACACATAGATACTAATACATTATCTGTCTGTGAACTTAGGTTCAAGAAATACAGCTGACAACATCACTGGATCAGGAAGGTATAAAAAGGGCATTGCAGCGAGTATTGGAACGTGTCCCATAATCTGAAAACAGAGTTCATTTTGTTCGATTTTGTATGATGCTGTCTGTAAAGAAGATGCTGTCAATTCAATTGTGTCCTGTAAGTTGTATATTTTGTCTGGTCTTTGTTCATCTATTCTAATTGTAAAAGGTCTTGTAAGCATGGATGCTCGATCATTGTCTGACAGCGTTCTGCTTGGAAGATTTATAGTCTTTGTTTTCATAGTCAATATAATAGTATAATTTTTTTGTGTTTCCTTGAATCCAAACATAGGTAAATTTCAATTAAACCTTTCCAA

mRNA sequence

GTTTTTGCGTCACGCAAATAACCGATCGGATTTGCAGCAGTAAACAGTTGGTGGCTTTCCATTTGGAGCCCAATCCGAATGCTTTCCCACTACCCTCCTCCCCGCCATTTCCTTCTCTCTCAACTCTCAGCATGCCACTCTTTGCTGCAACGCTCGGATCCCTCTCTGCTCATTCCTTTCTCTCGCTCTTCGCCTCCACCGATGCTTCAACCTCCTCCTTTTTTACCCTAAAATCTTCCTCTAAACGCCCTTCCACCTTCGCCGCCAGAGTTTCCCTCTCCGGAAAACCGGAGCCCATTGCCGGAGTTCTAGACAGTTCGCCTCCGTCGCCGGAATCCGTTCGTCGTGCTCGGAGATCTGCTGATTGGAAGGCAGCGAGGGAATACCTTGATGGTGGATTTATCTACGAGGGAAGGATTGAAGGTTCAAACGCTGGAGGTTTACTTGTCCGATTTTATTCTCTTGTGGGGTTTCTTCCATTTCCTCAATTGAGCCCGTCTCATTCATGTAAAGAACCATACAAGAGTATCCAAGATATTGCAAAAAGCTTAATTGGTTCGCTTATACCAGTGAAGGTTATCCAAGCAGATGAGAGAAACAAGAAATTGATATTTTCAGAGAAGGAAGCTGCGTGGTCAAAGTTTTCGGAGCAAGTTAGTGTGGGAGAGGTTTATGAAGCTAGAGTTGGCTCTGTGGAGGATTATGGTGCCTTTGTACATTTACGTTTCTCCGATGGTCTTTATCATCTTACTGGGCTAGTACATGTATCAGAAGTTTCATGGGATCTAGTTCAGGATGTAAGAGACATCTTAAGTGAGGGTGACGAAGTGAGGGTGAAAGTTATTAATGTTGATAGGGAAAAGTCCAGGATCACACTGTCAATTAAACAACTTGAGGAAGATCCACTCTTGGAAACATTGGATAAAGTTATACCGCAGGATGGTTCTGCTGAACCTGATTCTTTCGGACCTAGAAGTGACAGTGAAATTATACCACTTCCTGGACTTGAAACAATATTTGAAGAGCTACTGCAGGAAGATGGTATAGAAGATGTACGTGTCAACCGACAAGGATTTGAGAAGCGGGTGGTTTCACAAGACCTTCAACTTTGGCTATCAAATGCACCTCCCATTGAAAAGAAGTTCACTCTCCTTGCTCGTGCTGGGAGGCAGGTAGTTCTATCTCCTTCACACATGCACAAGCACATGCACATACACATAGATACTAATACATTATCTGTCTGTGAACTTAGGTTCAAGAAATACAGCTGACAACATCACTGGATCAGGAAGGTATAAAAAGGGCATTGCAGCGAGTATTGGAACGTGTCCCATAATCTGAAAACAGAGTTCATTTTGTTCGATTTTGTATGATGCTGTCTGTAAAGAAGATGCTGTCAATTCAATTGTGTCCTGTAAGTTGTATATTTTGTCTGGTCTTTGTTCATCTATTCTAATTGTAAAAGGTCTTGTAAGCATGGATGCTCGATCATTGTCTGACAGCGTTCTGCTTGGAAGATTTATAGTCTTTGTTTTCATAGTCAATATAATAGTATAATTTTTTTGTGTTTCCTTGAATCCAAACATAGGTAAATTTCAATTAAACCTTTCCAA

Coding sequence (CDS)

ATGCCACTCTTTGCTGCAACGCTCGGATCCCTCTCTGCTCATTCCTTTCTCTCGCTCTTCGCCTCCACCGATGCTTCAACCTCCTCCTTTTTTACCCTAAAATCTTCCTCTAAACGCCCTTCCACCTTCGCCGCCAGAGTTTCCCTCTCCGGAAAACCGGAGCCCATTGCCGGAGTTCTAGACAGTTCGCCTCCGTCGCCGGAATCCGTTCGTCGTGCTCGGAGATCTGCTGATTGGAAGGCAGCGAGGGAATACCTTGATGGTGGATTTATCTACGAGGGAAGGATTGAAGGTTCAAACGCTGGAGGTTTACTTGTCCGATTTTATTCTCTTGTGGGGTTTCTTCCATTTCCTCAATTGAGCCCGTCTCATTCATGTAAAGAACCATACAAGAGTATCCAAGATATTGCAAAAAGCTTAATTGGTTCGCTTATACCAGTGAAGGTTATCCAAGCAGATGAGAGAAACAAGAAATTGATATTTTCAGAGAAGGAAGCTGCGTGGTCAAAGTTTTCGGAGCAAGTTAGTGTGGGAGAGGTTTATGAAGCTAGAGTTGGCTCTGTGGAGGATTATGGTGCCTTTGTACATTTACGTTTCTCCGATGGTCTTTATCATCTTACTGGGCTAGTACATGTATCAGAAGTTTCATGGGATCTAGTTCAGGATGTAAGAGACATCTTAAGTGAGGGTGACGAAGTGAGGGTGAAAGTTATTAATGTTGATAGGGAAAAGTCCAGGATCACACTGTCAATTAAACAACTTGAGGAAGATCCACTCTTGGAAACATTGGATAAAGTTATACCGCAGGATGGTTCTGCTGAACCTGATTCTTTCGGACCTAGAAGTGACAGTGAAATTATACCACTTCCTGGACTTGAAACAATATTTGAAGAGCTACTGCAGGAAGATGGTATAGAAGATGTACGTGTCAACCGACAAGGATTTGAGAAGCGGGTGGTTTCACAAGACCTTCAACTTTGGCTATCAAATGCACCTCCCATTGAAAAGAAGTTCACTCTCCTTGCTCGTGCTGGGAGGCAGGTAGTTCTATCTCCTTCACACATGCACAAGCACATGCACATACACATAGATACTAATACATTATCTGTCTGTGAACTTAGGTTCAAGAAATACAGCTGA

Protein sequence

MPLFAATLGSLSAHSFLSLFASTDASTSSFFTLKSSSKRPSTFAARVSLSGKPEPIAGVLDSSPPSPESVRRARRSADWKAAREYLDGGFIYEGRIEGSNAGGLLVRFYSLVGFLPFPQLSPSHSCKEPYKSIQDIAKSLIGSLIPVKVIQADERNKKLIFSEKEAAWSKFSEQVSVGEVYEARVGSVEDYGAFVHLRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVRVKVINVDREKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPRSDSEIIPLPGLETIFEELLQEDGIEDVRVNRQGFEKRVVSQDLQLWLSNAPPIEKKFTLLARAGRQVVLSPSHMHKHMHIHIDTNTLSVCELRFKKYS

Homology

[Close]

BLAST of Lcy10g008740 vs. ExPASy Swiss-Prot
Match: P29344 (30S ribosomal protein S1, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPS1 PE=1 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 5.9e-22
Identity = 60/190 (31.58%), Postives = 104/190 (54.74%), Query Frame = 0


Query: 69  SVRRARRSADWKAAREYLDGGFIYEGRIEGSNAGGLLVRFYSLVGFLPFPQLSPSHSCKE 128
           S+R+ +    W+  R+      + +G+I G+N GG++     L GF+PF Q+S   S +E
Sbjct: 164 SLRQIQYELAWERCRQLQAEDVVVKGKIVGANKGGVVALVEGLRGFVPFSQISSKSSAEE 223

Query: 129 PYKSIQDIAKSLIGSLIPVKVIQADERNKKLIFSEKEAAWSKFSEQVSVGEVYEARVGSV 188
                      L+   IP+K ++ DE   +L+ S ++ A +    Q+ +G V    V S+
Sbjct: 224 -----------LLEKEIPLKFVEVDEEQSRLVMSNRK-AMADSQAQLGIGSVVTGTVQSL 283

Query: 189 EDYGAFVHLRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVRVKVINVDREKSRIT 248
           + YGAF+ +        + GL+HVS++S D V D+  +L  GD ++V +++ DRE+ R++
Sbjct: 284 KPYGAFIDIG------GINGLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRERGRVS 335

Query: 249 LSIKQLEEDP 259
           LS K+LE  P
Sbjct: 344 LSTKKLEPTP 335

[Close]

BLAST of Lcy10g008740 vs. ExPASy Swiss-Prot
Match: Q93VC7 (30S ribosomal protein S1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPS1 PE=1 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 2.5e-20
Identity = 59/190 (31.05%), Postives = 102/190 (53.68%), Query Frame = 0


Query: 69  SVRRARRSADWKAAREYLDGGFIYEGRIEGSNAGGLLVRFYSLVGFLPFPQLSPSHSCKE 128
           S+R  +    W+  R+      I + ++ G+N GGL+     L GF+PF Q+S   + +E
Sbjct: 167 SLRNIQYELAWERCRQLQAEDVIVKAKVIGANKGGLVALVEGLRGFVPFSQISSKAAAEE 226

Query: 129 PYKSIQDIAKSLIGSLIPVKVIQADERNKKLIFSEKEAAWSKFSEQVSVGEVYEARVGSV 188
                      L+   IP+K ++ DE   KL+ S ++A  +    Q+ +G V    V S+
Sbjct: 227 -----------LLEKEIPLKFVEVDEEQTKLVLSNRKAV-ADSQAQLGIGSVVLGVVQSL 286

Query: 189 EDYGAFVHLRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVRVKVINVDREKSRIT 248
           + YGAF+ +        + GL+HVS++S D V D+  +L  GD ++V +++ DR++ R++
Sbjct: 287 KPYGAFIDIG------GINGLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRDRGRVS 338

Query: 249 LSIKQLEEDP 259
           LS K+LE  P
Sbjct: 347 LSTKKLEPTP 338

[Close]

BLAST of Lcy10g008740 vs. ExPASy Swiss-Prot
Match: P46228 (30S ribosomal protein S1 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) OX=269084 GN=rpsA PE=1 SV=4)

HSP 1 Score: 101.3 bits (251), Expect = 2.5e-20
Identity = 59/190 (31.05%), Postives = 98/190 (51.58%), Query Frame = 0


Query: 69  SVRRARRSADWKAAREYLDGGFIYEGRIEGSNAGGLLVRFYSLVGFLPFPQLSPSHSCKE 128
           S+RR      W+  R+           +  +N GG LVR   L GF+P   +S +   KE
Sbjct: 99  SIRRIEYMRAWERVRQLQTEDATVRSEVFATNRGGALVRIEGLRGFIPGSHIS-TRKAKE 158

Query: 129 PYKSIQDIAKSLIGSLIPVKVIQADERNKKLIFSEKEAAWSKFSEQVSVGEVYEARVGSV 188
                      L+G  +P+K ++ DE   +L+ S + A   +   ++ VGEV    V  +
Sbjct: 159 ----------DLVGEELPLKFLEVDEDRNRLVLSHRRALVERKMNRLEVGEVVVGAVRGI 218

Query: 189 EDYGAFVHLRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVRVKVINVDREKSRIT 248
           + YGAF+ +        ++GL+H+SE+S D ++    + +  DEV+V +I++D E+ RI+
Sbjct: 219 KPYGAFIDIG------GVSGLLHISEISHDHIETPHSVFNVNDEVKVMIIDLDAERGRIS 271

Query: 249 LSIKQLEEDP 259
           LS KQLE +P
Sbjct: 279 LSTKQLEPEP 271

[Close]

BLAST of Lcy10g008740 vs. ExPASy Swiss-Prot
Match: Q9JZ44 (30S ribosomal protein S1 OS=Neisseria meningitidis serogroup B (strain MC58) OX=122586 GN=rpsA PE=1 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 1.4e-18
Identity = 64/197 (32.49%), Postives = 98/197 (49.75%), Query Frame = 0


Query: 69  SVRRARRSADWKAAREYLDGGFIYEGRIEGSNAGGLLVRFYSLVGFLPFPQLSPSHSCKE 128
           S  +A+R+ADW A  E ++ G I  G I G   GGL V   S+  FLP   +        
Sbjct: 86  SREKAKRAADWIALEEAMENGDILSGIINGKVKGGLTVMISSIRAFLPGSLVD------- 145

Query: 129 PYKSIQDIAKSLIGSLIPVKVIQADERNKKLIFSEKEAAWSKFSEQ-------VSVGEVY 188
             + ++D      G  I  KVI+ D++   ++ S +    +   E+       +  G V 
Sbjct: 146 -VRPVKD-TSHFEGKEIEFKVIKLDKKRNNVVVSRRAVLEATLGEERKALLENLQEGSVI 205

Query: 189 EARVGSVEDYGAFVHLRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVRVKVINVD 248
           +  V ++ DYGAFV L   DGL H+T      +++W  V+   ++L  G EV  KV+  D
Sbjct: 206 KGIVKNITDYGAFVDLGGIDGLLHIT------DLAWRRVKHPSEVLEVGQEVEAKVLKFD 265

Query: 249 REKSRITLSIKQLEEDP 259
           +EK R++L +KQL EDP
Sbjct: 266 QEKQRVSLGMKQLGEDP 267

[Close]

BLAST of Lcy10g008740 vs. ExPASy Swiss-Prot
Match: P73530 (30S ribosomal protein S1 homolog A OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=rps1A PE=3 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 1.8e-18
Identity = 54/190 (28.42%), Postives = 95/190 (50.00%), Query Frame = 0


Query: 69  SVRRARRSADWKAAREYLDGGFIYEGRIEGSNAGGLLVRFYSLVGFLPFPQLSPSHSCKE 128
           S+RR      W+  R+           +  +N GG LVR   L GF+P   +        
Sbjct: 98  SIRRIEYMRAWERVRQLQAEDATVRSNVFATNRGGALVRIEGLRGFIPGSHI-------- 157

Query: 129 PYKSIQDIAKSLIGSLIPVKVIQADERNKKLIFSEKEAAWSKFSEQVSVGEVYEARVGSV 188
              S ++  + L+G  +P+K ++ DE   +L+ S + A   +    + V +V    V  +
Sbjct: 158 ---SAREAKEDLVGEDLPLKFLEVDEERNRLVLSHRRALVERKMNGLEVAQVVVGSVRGI 217

Query: 189 EDYGAFVHLRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVRVKVINVDREKSRIT 248
           + YGAF+ +        ++GL+H+SE+S D +     + +  DE++V +I++D E+ RI+
Sbjct: 218 KPYGAFIDIG------GVSGLLHISEISHDHIDTPHSVFNVNDEIKVMIIDLDAERGRIS 270

Query: 249 LSIKQLEEDP 259
           LS KQLE +P
Sbjct: 278 LSTKQLEPEP 270

[Close]

BLAST of Lcy10g008740 vs. ExPASy TrEMBL
Match: A0A6J1IUF3 (uncharacterized protein LOC111479406 OS=Cucurbita maxima OX=3661 GN=LOC111479406 PE=4 SV=1)

HSP 1 Score: 604.4 bits (1557), Expect = 3.3e-169
Identity = 317/353 (89.80%), Postives = 334/353 (94.62%), Query Frame = 0


Query: 1   MPLFAA-TLGSLSAHSFLSLFASTDAS---TSSF-FTLKSSSKRPSTFAARVSLSGKPEP 60
           MP+FAA TLGSLSAHSFLSL ASTDAS   +SSF  T KS SKRPS FAARVSLSGKPEP
Sbjct: 1   MPIFAATTLGSLSAHSFLSLLASTDASHSLSSSFVLTHKSPSKRPSNFAARVSLSGKPEP 60

Query: 61  IAGVLDSSPPSPESVRRARRSADWKAAREYLDGGFIYEGRIEGSNAGGLLVRFYSLVGFL 120
           IAGVL+SSP SPESVRRARRSADWK AREYLD GFI++GRIEGSNAGGLLVRFYSLVGFL
Sbjct: 61  IAGVLESSPSSPESVRRARRSADWKTAREYLDSGFIFKGRIEGSNAGGLLVRFYSLVGFL 120

Query: 121 PFPQLSPSHSCKEPYKSIQDIAKSLIGSLIPVKVIQADERNKKLIFSEKEAAWSKFSEQV 180
           PFP LSP+HSCKEPYKSIQDIAKSLIGSLIPVKVIQADE+NK LIFSEKEAAWSKFSEQV
Sbjct: 121 PFPLLSPAHSCKEPYKSIQDIAKSLIGSLIPVKVIQADEKNKNLIFSEKEAAWSKFSEQV 180

Query: 181 SVGEVYEARVGSVEDYGAFVHLRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVRV 240
            VG+VYEARVGSVEDYGAFVHLRFSDG YHLTGLVH+SEVSWDLVQDVRDILSEGDEVRV
Sbjct: 181 GVGDVYEARVGSVEDYGAFVHLRFSDGFYHLTGLVHISEVSWDLVQDVRDILSEGDEVRV 240

Query: 241 KVINVDREKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPRSDSEIIPLPGLETI 300
           KV++VDR+KSRITLSIKQLEEDPLLETLDKVIPQD SAEPDSFGP+SDSEIIPLPGL+TI
Sbjct: 241 KVLDVDRDKSRITLSIKQLEEDPLLETLDKVIPQDDSAEPDSFGPKSDSEIIPLPGLDTI 300

Query: 301 FEELLQEDGIEDVRVNRQGFEKRVVSQDLQLWLSNAPPIEKKFTLLARAGRQV 349
           FEELLQE+GIEDV +NRQGFEKRVVSQDLQLWLSNAPP+EKKFTLLARAGRQV
Sbjct: 301 FEELLQEEGIEDVHINRQGFEKRVVSQDLQLWLSNAPPVEKKFTLLARAGRQV 353

[Close]

BLAST of Lcy10g008740 vs. ExPASy TrEMBL
Match: A0A6J1GVD7 (LOW QUALITY PROTEIN: uncharacterized protein LOC111457527 OS=Cucurbita moschata OX=3662 GN=LOC111457527 PE=4 SV=1)

HSP 1 Score: 602.4 bits (1552), Expect = 1.3e-168
Identity = 315/353 (89.24%), Postives = 332/353 (94.05%), Query Frame = 0


Query: 1   MPLFAA-TLGSLSAHSFLSLFASTDA----STSSFFTLKSSSKRPSTFAARVSLSGKPEP 60
           MP+FAA TLGSLSAHSFLSL AS DA    STS   T KS SKRPS FAARVSLSGKPEP
Sbjct: 47  MPIFAATTLGSLSAHSFLSLSASADASNSLSTSFLLTHKSPSKRPSNFAARVSLSGKPEP 106

Query: 61  IAGVLDSSPPSPESVRRARRSADWKAAREYLDGGFIYEGRIEGSNAGGLLVRFYSLVGFL 120
           IAGVL+SSP SPESVRRARRSADWK AREYLD GFI++GRIEGSNAGGLLVRFYSLVGFL
Sbjct: 107 IAGVLESSPSSPESVRRARRSADWKTAREYLDSGFIFKGRIEGSNAGGLLVRFYSLVGFL 166

Query: 121 PFPQLSPSHSCKEPYKSIQDIAKSLIGSLIPVKVIQADERNKKLIFSEKEAAWSKFSEQV 180
           PFP LSP+HSCKEPYKSIQDIAKSLIGSLIPVKVIQADE+NK LIFSEKEAAWSKFSE+V
Sbjct: 167 PFPLLSPAHSCKEPYKSIQDIAKSLIGSLIPVKVIQADEKNKNLIFSEKEAAWSKFSEKV 226

Query: 181 SVGEVYEARVGSVEDYGAFVHLRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVRV 240
            VG+VYEARVGS+EDYGAFVHLRFSDGLYHLTGLVH+SEVSWDLVQDVRDILSEGDEVRV
Sbjct: 227 GVGDVYEARVGSLEDYGAFVHLRFSDGLYHLTGLVHISEVSWDLVQDVRDILSEGDEVRV 286

Query: 241 KVINVDREKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPRSDSEIIPLPGLETI 300
           KVI+VDR+KSRITLSIKQLEEDPLLETLDKVIPQD SAEPDSFGP+SDSEIIPLPGL+TI
Sbjct: 287 KVIDVDRDKSRITLSIKQLEEDPLLETLDKVIPQDDSAEPDSFGPKSDSEIIPLPGLDTI 346

Query: 301 FEELLQEDGIEDVRVNRQGFEKRVVSQDLQLWLSNAPPIEKKFTLLARAGRQV 349
           FEELLQE+GIEDV +NRQGFEKRVVSQDLQLWLSNAPP+EKKFTLLARAGRQV
Sbjct: 347 FEELLQEEGIEDVHINRQGFEKRVVSQDLQLWLSNAPPVEKKFTLLARAGRQV 399

[Close]

BLAST of Lcy10g008740 vs. ExPASy TrEMBL
Match: A0A6J1CUJ6 (uncharacterized protein LOC111014714 OS=Momordica charantia OX=3673 GN=LOC111014714 PE=4 SV=1)

HSP 1 Score: 591.3 bits (1523), Expect = 2.9e-165
Identity = 310/351 (88.32%), Postives = 325/351 (92.59%), Query Frame = 0


Query: 1   MPLFAATLGSLSAHSFLSLFASTDASTSSFFT--LKSSSKRPSTFAARVSLSGKPEPIAG 60
           MP+  ATLGSLS +SFLS FASTD+S SS  T    S SKR   F  R+SL   P+PIAG
Sbjct: 1   MPICTATLGSLSPYSFLSHFASTDSSPSSILTHNHNSPSKRSPNFPPRLSLPANPDPIAG 60

Query: 61  VLD-SSPPSPESVRRARRSADWKAAREYLDGGFIYEGRIEGSNAGGLLVRFYSLVGFLPF 120
           VLD +SP SPES+ R+RRS DWKAAREYLD GFIYEGRIEGSNAGGLLVRF+SLVGFLPF
Sbjct: 61  VLDTTSPASPESLPRSRRSEDWKAAREYLDSGFIYEGRIEGSNAGGLLVRFHSLVGFLPF 120

Query: 121 PQLSPSHSCKEPYKSIQDIAKSLIGSLIPVKVIQADERNKKLIFSEKEAAWSKFSEQVSV 180
           PQLSPSHSCKEPYKSIQDIAKSL+GS++PVK+IQADERNKKLIFSEKEAAWSKFSEQVSV
Sbjct: 121 PQLSPSHSCKEPYKSIQDIAKSLLGSIVPVKIIQADERNKKLIFSEKEAAWSKFSEQVSV 180

Query: 181 GEVYEARVGSVEDYGAFVHLRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVRVKV 240
           GEVY+ARVGSVEDYGAFVHLRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVRVKV
Sbjct: 181 GEVYDARVGSVEDYGAFVHLRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVRVKV 240

Query: 241 INVDREKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPRSDSEIIPLPGLETIFE 300
           INVDREKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPRSDSEIIPLPGLETIFE
Sbjct: 241 INVDREKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPRSDSEIIPLPGLETIFE 300

Query: 301 ELLQEDGIEDVRVNRQGFEKRVVSQDLQLWLSNAPPIEKKFTLLARAGRQV 349
           ELLQEDGIEDVRVNRQGFEKRVVSQDLQLWLSNAPP+EKKF LLARAGRQV
Sbjct: 301 ELLQEDGIEDVRVNRQGFEKRVVSQDLQLWLSNAPPVEKKFILLARAGRQV 351

[Close]

BLAST of Lcy10g008740 vs. ExPASy TrEMBL
Match: A0A1S3BXL4 (30S ribosomal protein S1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494553 PE=4 SV=1)

HSP 1 Score: 577.0 bits (1486), Expect = 5.7e-161
Identity = 305/355 (85.92%), Postives = 321/355 (90.42%), Query Frame = 0


Query: 1   MPLFAATLGSLSAHSFLSLFAST-------DASTSSFFTLKSSSKRPSTFAARVSLSGKP 60
           MP+F AT+ S+S HSFLSL AST        +S+SS   LKS SKRPS F +RVSLSGKP
Sbjct: 45  MPIFLATIASVSTHSFLSLLASTSDASSTSSSSSSSILPLKSPSKRPSIFPSRVSLSGKP 104

Query: 61  EPIAGVLDSSPPSPESVRRARRSADWKAAREYLDGGFIYEGRIEGSNAGGLLVRFYSLVG 120
           +PIAGVLD+   SPESVRRARRSADWKAAREYLD GFIYEGRIEGSNAGGLLVRFYSL+G
Sbjct: 105 DPIAGVLDT---SPESVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSLMG 164

Query: 121 FLPFPQLSPSHSCKEPYKSIQDIAKSLIGSLIPVKVIQADERNKKLIFSEKEAAWSKFSE 180
           FLPFPQLSPSHSCKEP KSIQDIAKSL GSLI VKVIQADERNKKLIFSEKEA WSKFS 
Sbjct: 165 FLPFPQLSPSHSCKEPNKSIQDIAKSLTGSLISVKVIQADERNKKLIFSEKEATWSKFSG 224

Query: 181 QVSVGEVYEARVGSVEDYGAFVHLRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEV 240
           QV VG+VYEA+VGS+EDYGAFVHLRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEV
Sbjct: 225 QVGVGDVYEAKVGSLEDYGAFVHLRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEV 284

Query: 241 RVKVINVDREKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPRSDSEIIPLPGLE 300
            VKVINVDR+KSRITLSI+QLEEDPLLETLDKVIPQD SAEPDSFGP+SDSEIIPLPGL 
Sbjct: 285 TVKVINVDRDKSRITLSIRQLEEDPLLETLDKVIPQDSSAEPDSFGPKSDSEIIPLPGLG 344

Query: 301 TIFEELLQEDGIEDVRVNRQGFEKRVVSQDLQLWLSNAPPIEKKFTLLARAGRQV 349
           TI EEL QE+GI DVRVNRQGFEKRVVSQDLQLWLSNAPPIEKKFTLLARAGRQV
Sbjct: 345 TIIEELQQEEGIVDVRVNRQGFEKRVVSQDLQLWLSNAPPIEKKFTLLARAGRQV 396

[Close]

BLAST of Lcy10g008740 vs. ExPASy TrEMBL
Match: A0A0A0KTX2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G012510 PE=4 SV=1)

HSP 1 Score: 569.7 bits (1467), Expect = 9.1e-159
Identity = 303/355 (85.35%), Postives = 323/355 (90.99%), Query Frame = 0


Query: 1   MPLFAATLGSLSAHSFLSLFAST-DASTSS------FFTLKSSSKRPSTFAARVSLSGKP 60
           MP+F AT+ S+SAHSFLSL AST DAS++S         LKS SKR S F +RVSLSGKP
Sbjct: 1   MPIFVATIASVSAHSFLSLLASTSDASSTSSSSSSFILPLKSPSKRSSIFPSRVSLSGKP 60

Query: 61  EPIAGVLDSSPPSPESVRRARRSADWKAAREYLDGGFIYEGRIEGSNAGGLLVRFYSLVG 120
           +PIAGVLD+   SPESVRRARRSADWKAAREYLD GFIYEGRIEGSNAGGLLVRFYSLVG
Sbjct: 61  DPIAGVLDT---SPESVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSLVG 120

Query: 121 FLPFPQLSPSHSCKEPYKSIQDIAKSLIGSLIPVKVIQADERNKKLIFSEKEAAWSKFSE 180
           FLPFPQLSPSHSCKEPYKSIQDIAKSLIGSLI VKVIQADE+N+KLIFSEKEAA SKFS 
Sbjct: 121 FLPFPQLSPSHSCKEPYKSIQDIAKSLIGSLISVKVIQADEKNRKLIFSEKEAARSKFSG 180

Query: 181 QVSVGEVYEARVGSVEDYGAFVHLRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEV 240
           QV+VG+VYE +VGSVEDYGAFVHLR SDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEV
Sbjct: 181 QVAVGDVYEGKVGSVEDYGAFVHLRLSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEV 240

Query: 241 RVKVINVDREKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPRSDSEIIPLPGLE 300
            VKVINV++ KSRITLSI+QLEEDPLLETLDKVIPQ+ SAEPDSFGP+ DSEIIPLPGLE
Sbjct: 241 TVKVINVNKNKSRITLSIRQLEEDPLLETLDKVIPQESSAEPDSFGPKGDSEIIPLPGLE 300

Query: 301 TIFEELLQEDGIEDVRVNRQGFEKRVVSQDLQLWLSNAPPIEKKFTLLARAGRQV 349
           TI EELLQE+GI DVRVNRQGFEKRVVSQDLQLWLSNAPP+EKKFTLLARAGRQV
Sbjct: 301 TIIEELLQEEGIVDVRVNRQGFEKRVVSQDLQLWLSNAPPVEKKFTLLARAGRQV 352

[Close]

BLAST of Lcy10g008740 vs. NCBI nr
Match: XP_023526022.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111789621 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 607.1 bits (1564), Expect = 1.1e-169
Identity = 317/353 (89.80%), Postives = 334/353 (94.62%), Query Frame = 0


Query: 1   MPLFAA-TLGSLSAHSFLSLFASTDA----STSSFFTLKSSSKRPSTFAARVSLSGKPEP 60
           MP+FAA TLGSLSAHSFL+L ASTDA    STS F T KS SKRPS FAARVSLSGKP+P
Sbjct: 47  MPIFAATTLGSLSAHSFLALSASTDASNSLSTSFFLTHKSPSKRPSNFAARVSLSGKPDP 106

Query: 61  IAGVLDSSPPSPESVRRARRSADWKAAREYLDGGFIYEGRIEGSNAGGLLVRFYSLVGFL 120
           IAGVL+SSP SPESVRRARRSADWK AREYLD GFI++GRIEGSNAGGLLVRFYSLVGFL
Sbjct: 107 IAGVLESSPSSPESVRRARRSADWKTAREYLDSGFIFKGRIEGSNAGGLLVRFYSLVGFL 166

Query: 121 PFPQLSPSHSCKEPYKSIQDIAKSLIGSLIPVKVIQADERNKKLIFSEKEAAWSKFSEQV 180
           PFP LSP+HSCKEPYKSIQDIAKSLIGSLIPVKVIQADE+NK LIFSEKEAAWSKFSEQV
Sbjct: 167 PFPLLSPAHSCKEPYKSIQDIAKSLIGSLIPVKVIQADEKNKNLIFSEKEAAWSKFSEQV 226

Query: 181 SVGEVYEARVGSVEDYGAFVHLRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVRV 240
            VG+VYEARVGSVEDYGAFVHLRFSDGLYHLTGLVH+SEVSWDLVQDVRDILSEGDEVRV
Sbjct: 227 GVGDVYEARVGSVEDYGAFVHLRFSDGLYHLTGLVHISEVSWDLVQDVRDILSEGDEVRV 286

Query: 241 KVINVDREKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPRSDSEIIPLPGLETI 300
           KVI+VDR+KSRITLSIKQLEEDPLLETLDKVIPQD SAEPDSFGP+SDSEIIPLPGL+TI
Sbjct: 287 KVIDVDRDKSRITLSIKQLEEDPLLETLDKVIPQDDSAEPDSFGPKSDSEIIPLPGLDTI 346

Query: 301 FEELLQEDGIEDVRVNRQGFEKRVVSQDLQLWLSNAPPIEKKFTLLARAGRQV 349
           FEELLQE+GIEDV +NRQGFEKRVVSQDLQLWLSNAPP+EKKFTLLARAGRQV
Sbjct: 347 FEELLQEEGIEDVHINRQGFEKRVVSQDLQLWLSNAPPVEKKFTLLARAGRQV 399

[Close]

BLAST of Lcy10g008740 vs. NCBI nr
Match: KAG6582039.1 (30S ribosomal protein S1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 604.7 bits (1558), Expect = 5.3e-169
Identity = 318/353 (90.08%), Postives = 335/353 (94.90%), Query Frame = 0


Query: 1   MPLFAA-TLGSLSAHSFLSLFASTDAS---TSSFF-TLKSSSKRPSTFAARVSLSGKPEP 60
           MP+FAA TLGSLSAHSFLSL ASTDAS   +SSF  T KS SKRPS FAARVSLSGKPEP
Sbjct: 1   MPIFAATTLGSLSAHSFLSLLASTDASHSLSSSFVSTHKSPSKRPSNFAARVSLSGKPEP 60

Query: 61  IAGVLDSSPPSPESVRRARRSADWKAAREYLDGGFIYEGRIEGSNAGGLLVRFYSLVGFL 120
           IAGVL+SSP SPESVRRARRSADWK AREYLD GFI++GRIEGSNAGGLLVRFYSLVGFL
Sbjct: 61  IAGVLESSPSSPESVRRARRSADWKTAREYLDSGFIFKGRIEGSNAGGLLVRFYSLVGFL 120

Query: 121 PFPQLSPSHSCKEPYKSIQDIAKSLIGSLIPVKVIQADERNKKLIFSEKEAAWSKFSEQV 180
           PFP LSP+HSCKEPYKSIQDIAKSLIGSLIPVKVIQADE+NK LIFSEKEAAWSKFSE+V
Sbjct: 121 PFPLLSPAHSCKEPYKSIQDIAKSLIGSLIPVKVIQADEKNKNLIFSEKEAAWSKFSEKV 180

Query: 181 SVGEVYEARVGSVEDYGAFVHLRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVRV 240
            VG+VYEARVGSVEDYGAFVHLRFSDGLYHLTGLVH+SEVSWDLVQDVRDILSEGDEVRV
Sbjct: 181 GVGDVYEARVGSVEDYGAFVHLRFSDGLYHLTGLVHISEVSWDLVQDVRDILSEGDEVRV 240

Query: 241 KVINVDREKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPRSDSEIIPLPGLETI 300
           KVI+VDR+KSRITLSIKQLEEDPLLETLDKVIPQD SAEPDSFGP+SDSEIIPLPGL+TI
Sbjct: 241 KVIDVDRDKSRITLSIKQLEEDPLLETLDKVIPQDDSAEPDSFGPKSDSEIIPLPGLDTI 300

Query: 301 FEELLQEDGIEDVRVNRQGFEKRVVSQDLQLWLSNAPPIEKKFTLLARAGRQV 349
           FEELLQE+GIEDV +NRQGFEKRVVSQDLQLWLSNAPP+EKKFTLLARAGRQV
Sbjct: 301 FEELLQEEGIEDVHINRQGFEKRVVSQDLQLWLSNAPPVEKKFTLLARAGRQV 353

[Close]

BLAST of Lcy10g008740 vs. NCBI nr
Match: XP_022979820.1 (uncharacterized protein LOC111479406 [Cucurbita maxima])

HSP 1 Score: 604.4 bits (1557), Expect = 6.9e-169
Identity = 317/353 (89.80%), Postives = 334/353 (94.62%), Query Frame = 0


Query: 1   MPLFAA-TLGSLSAHSFLSLFASTDAS---TSSF-FTLKSSSKRPSTFAARVSLSGKPEP 60
           MP+FAA TLGSLSAHSFLSL ASTDAS   +SSF  T KS SKRPS FAARVSLSGKPEP
Sbjct: 1   MPIFAATTLGSLSAHSFLSLLASTDASHSLSSSFVLTHKSPSKRPSNFAARVSLSGKPEP 60

Query: 61  IAGVLDSSPPSPESVRRARRSADWKAAREYLDGGFIYEGRIEGSNAGGLLVRFYSLVGFL 120
           IAGVL+SSP SPESVRRARRSADWK AREYLD GFI++GRIEGSNAGGLLVRFYSLVGFL
Sbjct: 61  IAGVLESSPSSPESVRRARRSADWKTAREYLDSGFIFKGRIEGSNAGGLLVRFYSLVGFL 120

Query: 121 PFPQLSPSHSCKEPYKSIQDIAKSLIGSLIPVKVIQADERNKKLIFSEKEAAWSKFSEQV 180
           PFP LSP+HSCKEPYKSIQDIAKSLIGSLIPVKVIQADE+NK LIFSEKEAAWSKFSEQV
Sbjct: 121 PFPLLSPAHSCKEPYKSIQDIAKSLIGSLIPVKVIQADEKNKNLIFSEKEAAWSKFSEQV 180

Query: 181 SVGEVYEARVGSVEDYGAFVHLRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVRV 240
            VG+VYEARVGSVEDYGAFVHLRFSDG YHLTGLVH+SEVSWDLVQDVRDILSEGDEVRV
Sbjct: 181 GVGDVYEARVGSVEDYGAFVHLRFSDGFYHLTGLVHISEVSWDLVQDVRDILSEGDEVRV 240

Query: 241 KVINVDREKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPRSDSEIIPLPGLETI 300
           KV++VDR+KSRITLSIKQLEEDPLLETLDKVIPQD SAEPDSFGP+SDSEIIPLPGL+TI
Sbjct: 241 KVLDVDRDKSRITLSIKQLEEDPLLETLDKVIPQDDSAEPDSFGPKSDSEIIPLPGLDTI 300

Query: 301 FEELLQEDGIEDVRVNRQGFEKRVVSQDLQLWLSNAPPIEKKFTLLARAGRQV 349
           FEELLQE+GIEDV +NRQGFEKRVVSQDLQLWLSNAPP+EKKFTLLARAGRQV
Sbjct: 301 FEELLQEEGIEDVHINRQGFEKRVVSQDLQLWLSNAPPVEKKFTLLARAGRQV 353

[Close]

BLAST of Lcy10g008740 vs. NCBI nr
Match: KAG7018465.1 (30S ribosomal protein S1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 603.6 bits (1555), Expect = 1.2e-168
Identity = 316/353 (89.52%), Postives = 332/353 (94.05%), Query Frame = 0


Query: 1   MPLFAA-TLGSLSAHSFLSLFASTDA----STSSFFTLKSSSKRPSTFAARVSLSGKPEP 60
           MP+FAA TLGSLSAHSFLSL AS DA    STS   T KS SKRPS FAARVSLSGKPEP
Sbjct: 1   MPIFAATTLGSLSAHSFLSLSASADASNSLSTSFLLTHKSPSKRPSNFAARVSLSGKPEP 60

Query: 61  IAGVLDSSPPSPESVRRARRSADWKAAREYLDGGFIYEGRIEGSNAGGLLVRFYSLVGFL 120
           IAGVL+SSP SPESVRRARRSADWK AREYLD GFI++GRIEGSNAGGLLVRFYSLVGFL
Sbjct: 61  IAGVLESSPSSPESVRRARRSADWKTAREYLDSGFIFKGRIEGSNAGGLLVRFYSLVGFL 120

Query: 121 PFPQLSPSHSCKEPYKSIQDIAKSLIGSLIPVKVIQADERNKKLIFSEKEAAWSKFSEQV 180
           PFP LSP+HSCKEPYKSIQDIAKSLIGSLIPVKVIQADE+NK LIFSEKEAAWSKFSE+V
Sbjct: 121 PFPLLSPAHSCKEPYKSIQDIAKSLIGSLIPVKVIQADEKNKNLIFSEKEAAWSKFSEKV 180

Query: 181 SVGEVYEARVGSVEDYGAFVHLRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVRV 240
            VG+VYEARVGSVEDYGAFVHLRFSDGLYHLTGLVH+SEVSWDLVQDVRDILSEGDEVRV
Sbjct: 181 GVGDVYEARVGSVEDYGAFVHLRFSDGLYHLTGLVHISEVSWDLVQDVRDILSEGDEVRV 240

Query: 241 KVINVDREKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPRSDSEIIPLPGLETI 300
           KVI+VDR+KSRITLSIKQLEEDPLLETLDKVIPQD SAEPDSFGP+SDSEIIPLPGL+TI
Sbjct: 241 KVIDVDRDKSRITLSIKQLEEDPLLETLDKVIPQDDSAEPDSFGPKSDSEIIPLPGLDTI 300

Query: 301 FEELLQEDGIEDVRVNRQGFEKRVVSQDLQLWLSNAPPIEKKFTLLARAGRQV 349
           FEELLQE+GIEDV +NRQGFEKRVVSQDLQLWLSNAPP+EKKFTLLARAGRQV
Sbjct: 301 FEELLQEEGIEDVHINRQGFEKRVVSQDLQLWLSNAPPVEKKFTLLARAGRQV 353

[Close]

BLAST of Lcy10g008740 vs. NCBI nr
Match: XP_038897871.1 (30S ribosomal protein S1 homolog B [Benincasa hispida])

HSP 1 Score: 602.8 bits (1553), Expect = 2.0e-168
Identity = 316/351 (90.03%), Postives = 331/351 (94.30%), Query Frame = 0


Query: 1   MPLFAATLGSLSAHSFLSLFAS-TDASTSSFFTL--KSSSKRPSTFAARVSLSGKPEPIA 60
           MP+FAATLGS+ AHSFLSL AS TD ++S+ F L  KS SKRPS F ARVSLSGKP+PIA
Sbjct: 1   MPIFAATLGSVFAHSFLSLLASTTDGASSTSFILPQKSPSKRPSNFPARVSLSGKPDPIA 60

Query: 61  GVLDSSPPSPESVRRARRSADWKAAREYLDGGFIYEGRIEGSNAGGLLVRFYSLVGFLPF 120
           GVLD+SP SPES+RRARRSADWKAAREYLD GFIYEGRIEGSNAGGLLVRFYSL+GFLPF
Sbjct: 61  GVLDTSPSSPESLRRARRSADWKAAREYLDNGFIYEGRIEGSNAGGLLVRFYSLMGFLPF 120

Query: 121 PQLSPSHSCKEPYKSIQDIAKSLIGSLIPVKVIQADERNKKLIFSEKEAAWSKFSEQVSV 180
           PQLSPSHSCKEPYKSIQDIAKSLIGSLI VKVIQADERNKKLIFSEKEAAWSKFSEQV V
Sbjct: 121 PQLSPSHSCKEPYKSIQDIAKSLIGSLISVKVIQADERNKKLIFSEKEAAWSKFSEQVGV 180

Query: 181 GEVYEARVGSVEDYGAFVHLRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVRVKV 240
           G+VYEARVGSVEDYGAFVHLRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEV VKV
Sbjct: 181 GDVYEARVGSVEDYGAFVHLRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKV 240

Query: 241 INVDREKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPRSDSEIIPLPGLETIFE 300
           INVDR+KSRITLSIKQLEEDPLLETLDKVIPQ GSAEPDSFGP+SDSEI+PLPGLETI E
Sbjct: 241 INVDRDKSRITLSIKQLEEDPLLETLDKVIPQGGSAEPDSFGPKSDSEIMPLPGLETIIE 300

Query: 301 ELLQEDGIEDVRVNRQGFEKRVVSQDLQLWLSNAPPIEKKFTLLARAGRQV 349
           ELLQEDGI D+ VNRQGFEKRVVSQDLQLWLSNAPP+EKKFTLLARAGRQV
Sbjct: 301 ELLQEDGIVDICVNRQGFEKRVVSQDLQLWLSNAPPVEKKFTLLARAGRQV 351

[Close]

BLAST of Lcy10g008740 vs. TAIR 10
Match: AT3G23700.1 (Nucleic acid-binding proteins superfamily )

HSP 1 Score: 391.0 bits (1003), Expect = 1.1e-108
Identity = 215/360 (59.72%), Postives = 256/360 (71.11%), Query Frame = 0


Query: 5   AATLGSLS--AHSF----------LSLFASTDASTSSFFTL----KSSSKRPSTFAARVS 64
           A TLGS+S  +H F          L L  S+ +S+S+  +L    KS S   +    R S
Sbjct: 7   ATTLGSVSFASHLFDQQSTFLSCPLRLLPSSSSSSSNRNSLVCIVKSFSSSATADTDRNS 66

Query: 65  LSGKPEPIAGVLDSSPPSPESVRRARRSADWKAAREYLDGGFIYEGRIEGSNAGGLLVRF 124
                  +    +S          A   +DWK A+ Y   G  +EG ++G N GGLL+RF
Sbjct: 67  DQSASSSVLSASNSLLRDTSDEASAAGPSDWKTAKAYCKSGDTFEGEVQGFNGGGLLIRF 126

Query: 125 YSLVGFLPFPQLSPSHSCKEPYKSIQDIAKSLIGSLIPVKVIQADERNKKLIFSEKEAAW 184
           +SLVGFLP+PQLSPS SCKEP KSI +IAK+L+GS +PVKV+QADE N+KLI SEK A W
Sbjct: 127 HSLVGFLPYPQLSPSRSCKEPQKSIHEIAKTLVGSKLPVKVVQADEENRKLILSEKLALW 186

Query: 185 SKFSEQVSVGEVYEARVGSVEDYGAFVHLRFSDGLYHLTGLVHVSEVSWDLVQDVRDILS 244
            K+S+ V+VG+V+  RVGSVEDYGAF+HLRF DGLYHLTGLVHVSEVSWD VQDVRD+L 
Sbjct: 187 PKYSQNVNVGDVFNGRVGSVEDYGAFIHLRFDDGLYHLTGLVHVSEVSWDYVQDVRDVLR 246

Query: 245 EGDEVRVKVINVDREKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPRSDSEIIP 304
           +GDEVRV V N+D+EKSRITLSIKQLE+DPLLETLDKVI +D S    S    +   I P
Sbjct: 247 DGDEVRVIVTNIDKEKSRITLSIKQLEDDPLLETLDKVILKDSSTGSPSLSSNNGDTIEP 306

Query: 305 LPGLETIFEELLQEDGIEDVRVNRQGFEKRVVSQDLQLWLSNAPPIEKKFTLLARAGRQV 349
           LPGLETI EELL+EDGIE V++NRQGFEKRVVSQDLQLWLSN PP + KF LLARAGRQV
Sbjct: 307 LPGLETILEELLKEDGIEAVKINRQGFEKRVVSQDLQLWLSNTPPSDGKFVLLARAGRQV 366

[Close]

BLAST of Lcy10g008740 vs. TAIR 10
Match: AT5G30510.1 (ribosomal protein S1 )

HSP 1 Score: 101.3 bits (251), Expect = 1.8e-21
Identity = 59/190 (31.05%), Postives = 102/190 (53.68%), Query Frame = 0


Query: 69  SVRRARRSADWKAAREYLDGGFIYEGRIEGSNAGGLLVRFYSLVGFLPFPQLSPSHSCKE 128
           S+R  +    W+  R+      I + ++ G+N GGL+     L GF+PF Q+S   + +E
Sbjct: 167 SLRNIQYELAWERCRQLQAEDVIVKAKVIGANKGGLVALVEGLRGFVPFSQISSKAAAEE 226

Query: 129 PYKSIQDIAKSLIGSLIPVKVIQADERNKKLIFSEKEAAWSKFSEQVSVGEVYEARVGSV 188
                      L+   IP+K ++ DE   KL+ S ++A  +    Q+ +G V    V S+
Sbjct: 227 -----------LLEKEIPLKFVEVDEEQTKLVLSNRKAV-ADSQAQLGIGSVVLGVVQSL 286

Query: 189 EDYGAFVHLRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVRVKVINVDREKSRIT 248
           + YGAF+ +        + GL+HVS++S D V D+  +L  GD ++V +++ DR++ R++
Sbjct: 287 KPYGAFIDIG------GINGLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRDRGRVS 338

Query: 249 LSIKQLEEDP 259
           LS K+LE  P
Sbjct: 347 LSTKKLEPTP 338

[Close]

BLAST of Lcy10g008740 vs. TAIR 10
Match: AT1G12800.1 (Nucleic acid-binding, OB-fold-like protein )

HSP 1 Score: 86.7 bits (213), Expect = 4.5e-17
Identity = 71/224 (31.70%), Postives = 107/224 (47.77%), Query Frame = 0


Query: 134 QDIAKSLIGSLIPVKVIQADERNKKLIFS----EKEAAWSK---FSEQVSVGEVYEARVG 193
           Q    S +G  I V V+ A+  ++KLIFS    E E    K      ++ VG+V +  + 
Sbjct: 531 QKFLSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIK 590

Query: 194 SVEDYGAFVHLRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVRVKVINVDREKSR 253
            +  +G F  L        +  LVH SEVSWD   D       G  V  KV  +D    R
Sbjct: 591 KITYFGIFCELE------GVPALVHQSEVSWDATLDPASYFKIGQIVEAKVHQLDFALER 650

Query: 254 ITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPRSDSEIIPL--PGLETIFEELLQEDG 313
           I LS+K++  DPL E L+ V+  D     D  G R  +  +    P +E++ +EL   +G
Sbjct: 651 IFLSLKEITPDPLTEALESVVGGDN----DQLGGRLQAAELDAEWPDVESLIKELEMVEG 710

Query: 314 IEDVRVNRQGFEKRVVSQDLQLWLSNAPPIEKKFTLLARAGRQV 349
           I+ V  +R  F    ++   Q+++  AP  E ++ LLARAG +V
Sbjct: 711 IQSVSKSR-FFLSPGLAPTFQVYM--APMFENQYKLLARAGNRV 741

[Close]

BLAST of Lcy10g008740 vs. TAIR 10
Match: AT4G29060.1 (elongation factor Ts family protein )

HSP 1 Score: 58.5 bits (140), Expect = 1.3e-08
Identity = 36/115 (31.30%), Postives = 68/115 (59.13%), Query Frame = 0


Query: 172 SEQVSVGEVYEARVGSVEDYGAFVHL-RFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEG 231
           +E++  G  +  +V +++ +GAFV    F+D      GLVHVS++S + V+DV  +++ G
Sbjct: 130 NEELVPGATFTGKVRAIQPFGAFVDFGAFTD------GLVHVSQLSDNFVKDVSSVVTIG 189

Query: 232 DEVRVKVINVDREKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPRSDSE 286
            EV+V+++  D E  RI+L++++ ++ P  ++        GS +P S G R  S+
Sbjct: 190 QEVKVRLVEADIESKRISLTMRENDDPPKRQS-------GGSDKPRSGGKRDGSK 231

[Close]

BLAST of Lcy10g008740 vs. TAIR 10
Match: AT4G29060.2 (elongation factor Ts family protein )

HSP 1 Score: 58.5 bits (140), Expect = 1.3e-08
Identity = 36/115 (31.30%), Postives = 68/115 (59.13%), Query Frame = 0


Query: 172 SEQVSVGEVYEARVGSVEDYGAFVHL-RFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEG 231
           +E++  G  +  +V +++ +GAFV    F+D      GLVHVS++S + V+DV  +++ G
Sbjct: 130 NEELVPGATFTGKVRAIQPFGAFVDFGAFTD------GLVHVSQLSDNFVKDVSSVVTIG 189

Query: 232 DEVRVKVINVDREKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPRSDSE 286
            EV+V+++  D E  RI+L++++ ++ P  ++        GS +P S G R  S+
Sbjct: 190 QEVKVRLVEADIESKRISLTMRENDDPPKRQS-------GGSDKPRSGGKRDGSK 231

The following BLAST results are available for this feature:

BLAST of Lcy10g008740 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P29344	5.9e-22	31.58	30S ribosomal protein S1, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPS1 PE=...	[more]
Q93VC7	2.5e-20	31.05	30S ribosomal protein S1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPS1 ...	[more]
P46228	2.5e-20	31.05	30S ribosomal protein S1 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SA...	[more]
Q9JZ44	1.4e-18	32.49	30S ribosomal protein S1 OS=Neisseria meningitidis serogroup B (strain MC58) OX=...	[more]
P73530	1.8e-18	28.42	30S ribosomal protein S1 homolog A OS=Synechocystis sp. (strain PCC 6803 / Kazus...	[more]

BLAST of Lcy10g008740 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IUF3	3.3e-169	89.80	uncharacterized protein LOC111479406 OS=Cucurbita maxima OX=3661 GN=LOC111479406...	[more]
A0A6J1GVD7	1.3e-168	89.24	LOW QUALITY PROTEIN: uncharacterized protein LOC111457527 OS=Cucurbita moschata ...	[more]
A0A6J1CUJ6	2.9e-165	88.32	uncharacterized protein LOC111014714 OS=Momordica charantia OX=3673 GN=LOC111014...	[more]
A0A1S3BXL4	5.7e-161	85.92	30S ribosomal protein S1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494553 PE=4...	[more]
A0A0A0KTX2	9.1e-159	85.35	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G012510 PE=4 SV=1	[more]

BLAST of Lcy10g008740 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023526022.1	1.1e-169	89.80	LOW QUALITY PROTEIN: uncharacterized protein LOC111789621 [Cucurbita pepo subsp....	[more]
KAG6582039.1	5.3e-169	90.08	30S ribosomal protein S1, chloroplastic, partial [Cucurbita argyrosperma subsp. ...	[more]
XP_022979820.1	6.9e-169	89.80	uncharacterized protein LOC111479406 [Cucurbita maxima]	[more]
KAG7018465.1	1.2e-168	89.52	30S ribosomal protein S1, chloroplastic [Cucurbita argyrosperma subsp. argyrospe...	[more]
XP_038897871.1	2.0e-168	90.03	30S ribosomal protein S1 homolog B [Benincasa hispida]	[more]

BLAST of Lcy10g008740 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G23700.1	1.1e-108	59.72	Nucleic acid-binding proteins superfamily	[more]
AT5G30510.1	1.8e-21	31.05	ribosomal protein S1	[more]
AT1G12800.1	4.5e-17	31.70	Nucleic acid-binding, OB-fold-like protein	[more]
AT4G29060.1	1.3e-08	31.30	elongation factor Ts family protein	[more]
AT4G29060.2	1.3e-08	31.30	elongation factor Ts family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022967	RNA-binding domain, S1	SMART	SM00316	S1_6	coord: 176..252 e-value: 2.8E-20 score: 83.4 coord: 87..164 e-value: 2.0E-5 score: 34.0
IPR003029	S1 domain	PFAM	PF00575	S1	coord: 176..252 e-value: 2.2E-18 score: 66.4
IPR003029	S1 domain	PROSITE	PS50126	S1	coord: 178..252 score: 21.078571
IPR003029	S1 domain	PROSITE	PS50126	S1	coord: 89..164 score: 12.956577
None	No IPR available	GENE3D	2.40.50.140		coord: 170..264 e-value: 2.1E-26 score: 93.8 coord: 79..169 e-value: 2.5E-9 score: 39.1
None	No IPR available	PANTHER	PTHR47559	OS03G0844900 PROTEIN	coord: 12..348
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 89..164
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 165..257

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy10g008740.1	Lcy10g008740.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032508	DNA duplex unwinding
biological_process	GO:0000481	maturation of 5S rRNA
biological_process	GO:0009737	response to abscisic acid
biological_process	GO:0034337	RNA folding
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003676	nucleic acid binding