Lcy10g008510 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy10g008510
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	CCHC-type domain-containing protein
Location	Chr10: 34382515 .. 34388343 (+)
RNA-Seq Expression	Lcy10g008510
Synteny	Lcy10g008510

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAAAGAGAAAGCAAATCATATTATGCTAGATGGAGAGGACATGAAAGAAATTAAAGATCACCTGGATCATTGTATTGTGGGGAAACTCCTTTCTAACCGTATCATAGCTCCATTTGCCATCAAGAATGCTTTGAGAGGAGCCTGGAAAACAAGGAAGAATTTCAGTGTAGAGTCTATTGGAAAGAACATTTTCAATTTCAAGTTTGAATGCCAAGGAGACAGAGATTGGGTTATGAGCAATGGACCATGGACATTTGATAAATCTATGATAGTTCTTGAATTCCCTAAAGCCAACCAAAGATCAATGGAGATGGATTTCAAGAAAGCAGAATTCTGGATTAGACTATTAAATTTACCAATGGGTTACAGAAACAAAAAAGTGGCAAGGAAAATAGGGGATAGCATTGGTGAGTTTCTTGAAGGAGGAGAAGGAGAAGAGGACATCAGTTGGGGCCAAAGTATTCGTATCAGAGTAAGGCTAGATATAACTAAGCCACTGCTGAGAGGTTTTATGCTCAAAGGTCAGGATATTGGAGAAGAGTGTTGGGTCACAATCCGTTACGAAAGACTGTCGGAATTCTGCTTTCTATGTGGCAAGATCGGACACGTAGCAAAGGAGTGCGAGGGGAAAAAAGGAATGGAGGAAAGGAACATGGACAAGCTGGAATTTGGGAATTGGCTGAGGTTCCAAAGCTTCTCAAGATTCAGCAAGAAACCAGAATCCCCAAAAGACACAAGTAACACCCAAGATCCTCAAAGAGACAAGACGGAAGAAGGCTTAAAAGAAAAAGGAAGAGGGACTGAATATGATATTAAAGGCAAAGTGGTCATAGAAAATATTCTGGAAGATGAGGAGGGGTTTTATGAATTGAGGAGTAAAAGAGATGAAGGAACGTCTTATTGGACACATGATTTAAATGATTCGGCAAATATGGAGGCTGGATTTCAAGAAGCTTTGAACGAAGGAAACAGGCACATTGAAAGAGTTGAGGAAGGAGAATTTGAAAAAGATGAAAAGTATGATGAAGGTGTAATATTGGTCACACAAAGAATGGAAGGGGAGTATCCTCTTGTGGAGAATCTGAGATCAGAAGGAATGATAGCTAGGAAGATGCCATCAGAGAAGAAAAAAGGACTTTGGAGGAGGAAAGCAAGAATGGGATCTGCTGGAAAAATTCAAGGAGAAAGGGTTGTTTCACTAAAGAGAAAGGCTGATGATGGAGGTGGAGAGGATAACAAGAGGCACAAAGCTGGAGACTACATGATTATTGAGATGAATGGTTTGGAAAATTCATTGGCAGCAGCTGTGGATCAGCCCTGCCAAGGGCCATGAAAATATTATGCTGGAATGCTCGGGGTTTGGGGAACCCGAGAGCATTCCGAAGTCTAAGAGGCCTAGTCTTAGCAAGAAACCCCCAAATCCTCTTCCTTTCTGAAACAAAATGTGATGAAAAGACTACAAGTAGAATAAAGACAAGTTGTGGTTTTGAAGGCTGTTTCACAGTCAAAAGTAAGGGTGCAAAAGGTGGAATCTGTTTATTGTGGAAAGGAGAAGTCATGGTGAATGTTAGATCTTTTTCAGACAACCACATTGACTCATCAGTCAATTGGCAAGGGAAGCAGTGGAGATTCACGGGAGTGTACGGATTTCCTGAGCAAAACCAAAAACAATTAACATGGAACCTCATTCGAAGATTGCATTTATCAAATAATTTGCCGTGGCTTATTGGAGGGGATATAAATGAAATCTTGGATGATTCAGAAAAATGGGGAGGCCCGAGAAGAGAAAGAAGATGTCTGGAGGAGTTTAGAAGAGTGCTTGACGACTGTAATCTAAGGGATATTAGACCAAAGGGAGACCTTTTCACTTGGCACAGTAACAGAAGGGGAAGTCATGTTTGGGAGAGGGTGGACCGATTTCTTTGCAATAATTCCTTTGATGTGTTATTTGAAAGGGCTGGAGCTTTTAATCTTGATTGGCTGTTTTCTGATCATAGGCCAATTAAAGTCAACTTAAATACCAAAAGTTCAAGGGAAGGAAGATGGCCAAGCAAACCATTCAGATTTGAAGAGTTCTAGACAGAGCATGGAAAATGTGAAGAGTTAATTTCCAAGAATGGTGAATGGAAGGGAAGTAGCTTTCATTTAACATCCTTATCTTTAGATCTAAATAATTGCTCTATTGCTTTATCTAATTGGGGGAGGGAGGTTAATTCTAGAAGAAAGAATAGAATAAAAGAATGTAAAAATGCTCTAAAAGAAGCTTATAAAAACCTTGCCCTCATAGATTTTGATTCCATCCATAATATAGAATTTGAACTAGACAAATTAATGGAGGAGGAAGAAATTTACTGGAGACAAAGGTCTAGGGAGGATTGGCTTAAATGGGGGGATAAGAATTCTAAGTGGTTTCATAAAAAAGCATCTATTAGAAGAAAAACAAATGAAATTTTAGGTATTATTAACCCAGATGGTGTTTGGTCAGAGAGCCCTAATGAGATTGAGGATGCCTTCATATCTTATTTTGAGAAACTTTTTTAATCTACTTCTCATGATCCCTCAAATATTGATTTAGCTTTGGAAGGTTTAAGGCCTAGGGTTAACCAGGATATGAATAATAAACTTTTACTACCTTTTTCAAAAGAGGAAATAGAAAAATCAATTAAGCAAATGTTTCCCACCAAAGCCCCCGGACCGGATGGCTATTCGGCCATTTTTTATCAAAAATACTGGAAATTAGTAGGAGAGAAAACTACAGCCGAATGCCTAGATATCTTAAATGGCAGAAAGAGCATTAGGGATTGGAACAAAACAAACATTGTATTAATTCCTAAAGTTTCTAATCCTAGGGAGGTTAGTGATTTTAGACCCATTAGCCTTTGTAATGTTAATTATAAGATAATAACAAAAATAATTGCTAATAGGCTTAAAGGAATTTTAAAGGATATTATTTTGGAGTCCTAATCCGCTTTTATTCAAGGTAGACTAATAACGGATAATATAATAATTGGGCACAAATGTATTAATGCGATAAGGAATAATAAACATTTTAAGGGAGATATGGCTGCCTTTAAAATTGACCTAAGCAAAGCCTATGATAGGGTTGAGTGGAGCTTTTTAAAAGAAATATTGCTTAGATTGGGTTTCAACTCTAATTGGGTTGAGCTTATAATGAACTGTATTTCTTCCCCTTGTTTCTCTATTCTAATAAATGGGGAGCGAAAAGGCAATTTTCATTCTAGTAGAGGGCTTCGCCAGGGAGATCCATTATCCCCATACCTTTTTATCCTTGTTGCCGAAGGTCTCTCCCATTTAATATCAAAAGCTAATTCTAGGGGTAGTCTTACGGGTCTTACTTGTTCTAATGGTCCCATGATTTCACATTTACTATTTGCAGATGACAGTATTATCTTTTGTAGGGCTGCTGAACAAGAGCTTGTTTCTCTTAAAAATTTATTAAAAATATATGAACTAGCTTCAGGGGAATGCATTAATTACTCAAAATCTGCCATATTATTCTCTAAAAAGGTTAACAATGACAGAAAACAGTTTCTTAGTTCTATTTTGGGGGTGATGAATGTTAGTGATTTTGGAAAGTATTTGGGGGTGCCTTCGGTCTTCTCTAGAAGCAAAACAAAAGACCTAGCCTATATCTTAGATAGAACTTGGAAGGCTGTTCAGGGGTGGAAACGCTCTCTTTTTTCCATAGCAGGGAAAGAAACTTTAATTAAAAGTGTTGGGCAAGCCATCCCTTCATATGCAATGAGTGTTTTTCGTTTCCCTAAAAAGCTTTGTGAGGATATATCTAGGAATTTTGCTAGGTTCTGGTGGGGATCAAATGAAAATAAAAAGAAAATGCATTGGTGTAGTTGGGATAAGCTTTGTCTTCCTAAAAGCCTCGGGGGCCTTAACTTTAGAGATTTAGAAGGGTTTAATAAAGCTTTAGTTGCAAAGCAAGTCTGGAGATTAATGGCCTTTCCAAATTCCTTAGTAGCAAGGTTTATTAAAAGCTTATACTTTAGAAATTGCAGCATTCTAGAGGCAGAGGAAGGGAAGAGCTCTTCCTATATTTGGAAGAGCCTTATATGGGGTAGAGATCTACTAAGGAAAGGGTTGAGGTTTAGGCTGGGTAATGGAGAGAAGATAGCCATGTTTGATGACCCGTGGATTCCCAAAGAAAATACTTTTAAGCCAATTTGCATTAATAGAAATTTCTGGAATGAAAAGGTTGTGGATTTTATTTCTCCTAGCGGGGATTGGAACATTATGAAGTTAGAACAGGCTGTGCTCAGTTGTGATGTGGAGGAAATAAGGAAAATTCCTATCAATAAAAATCTGGAAGATAGAATGATATGGCATTATGATAAATTGGGGAAATATACGGTCAAGAGTGGGTATAAACTCTTTATTAAAGAAAAAATAGATGGCATCTCTCCTAGTTCAAATATAATGAGCAAAGTGTGGAATTCAATTTGGAATTTAAAAGTTCCTCCTAAAATAAAGCATTTTTTCTGGAAGGCCCTAAATAACATCTTCCCTACAAAAATTAATCTTAAAAACAGGGGTGTAGACAATAATCTTCTATGTCCTGTCTGTTCTAACTATTCAGAAACCACAGATCATATTCTTTTCAAATGTAAAGAGCTAATGAGATTTGGATTAATACCTTTAACGGTGCTTTTCTGAATATTGATTTTAATGAAAGTTTTGTTGACAGATGGGTAGAGATCAGCTCGAGATGCACGAAGGAGGAGCTAGGCCTTGTAGCAGTTACATGCTGGTCTATCTGGGAGGACAGAAATAAAGTCATGCATGAAGATCCTATCCCTCCAACAATCAAAAGAAGCCAGTGGATTAGAGAATACCTGAGAAATTACGAGGAGGCGAACTCGAAGACTGATAGCTCGCAAAAGCAGACCACAAATCGAAGAATCAATTCTCCAAATGAAGTTTGGTCTCCTCCTCCGAGAGGCTGTTGGAAGATCAATGTTGATGCGGCATGGTCGGATCATCTTTCGGTGATGGGAATCGGCATTGTGTGTAGGGATTCTGATGGAGCCATCATCGAAGCTTCAAGTTTCTCTTCTGACTTGATTCCTGAGGCCCCTGGCGCTGAATTGAAGGCAATCTTGATGGGAGTTAGAAGGGCTATCGATTTGGGTTGTGGGAGTATTATTTTGGAATCAGATTGTCAAGTGGCTATTAACTTCCTAACAAAGGCTTCTGAAGTTTGGTGTAATGTAGAGGGCCTAGTTGAAGAGATTTGGGCTTTGGAAAATGGGCTCAGATATATTAGATATCAATATGTGTCCAGAAAGGGGAATAAAGTGGCTGATAGTTTAGCCAAGAGAGCAAAATTGTCAAATTGTAGCGAGTCTTGGGTTGATTATTTCCCAGATTGGTTGTGTTTGTTGGTCGAGAATGACCGTTCTTCATTTGCCCAAGTGGCAGTTTAATAATATAGTATTTTTTCAAAAAAAAAAAATTGGTATATGGTAACAAATTTACAAAGACAAATTACTTTTCAAATTGAAAAGTTAATTTAAAAAGAAAAAATTTGAAAAGTTAAAATTGAGGTTAATCATGGCTAGTTGAACTACAATTATTTCGCAACGAGAAACGGACAAAACTAACGGATATTTTTAACCAGAGTACTGAGTAGGGCATCGGTTTGGCTTGAGCCAAGCTGCAGGCAGTTCATTGGCTCTAACGTTTTGGCGCCATTGGCAAAGGTTTCAAAGTCAGCTCCAGCTGAGTTGGACACATTAGAGCACATTTTTTTTTTCATGCTTTCCAGGCTGGCACCTCCCCCAATTTTGTATAA

mRNA sequence

ATGGAGAAAGAGAAAGCAAATCATATTATGCTAGATGGAGAGGACATGAAAGAAATTAAAGATCACCTGGATCATTGTATTGTGGGGAAACTCCTTTCTAACCGTATCATAGCTCCATTTGCCATCAAGAATGCTTTGAGAGGAGCCTGGAAAACAAGGAAGAATTTCAGTGTAGAGTCTATTGGAAAGAACATTTTCAATTTCAAGTTTGAATGCCAAGGAGACAGAGATTGGGTTATGAGCAATGGACCATGGACATTTGATAAATCTATGATAGTTCTTGAATTCCCTAAAGCCAACCAAAGATCAATGGAGATGGATTTCAAGAAAGCAGAATTCTGGATTAGACTATTAAATTTACCAATGGGTTACAGAAACAAAAAAGTGGCAAGGAAAATAGGGGATAGCATTGGTGAGTTTCTTGAAGGAGGAGAAGGAGAAGAGGACATCAGTTGGGGCCAAAGTATTCGTATCAGAGTAAGGCTAGATATAACTAAGCCACTGCTGAGAGGTTTTATGCTCAAAGGTCAGGATATTGGAGAAGAGTGTTGGGTCACAATCCGTTACGAAAGACTGTCGGAATTCTGCTTTCTATGTGGCAAGATCGGACACGTAGCAAAGGAGTGCGAGGGGAAAAAAGGAATGGAGGAAAGGAACATGGACAAGCTGGAATTTGGGAATTGGCTGAGGTTCCAAAGCTTCTCAAGATTCAGCAAGAAACCAGAATCCCCAAAAGACACAAGTAACACCCAAGATCCTCAAAGAGACAAGACGGAAGAAGGCTTAAAAGAAAAAGGAAGAGGGACTGAATATGATATTAAAGGCAAAGTGGTCATAGAAAATATTCTGGAAGATGAGGAGGGGTTTTATGAATTGAGGAGTAAAAGAGATGAAGGAACGTCTTATTGGACACATGATTTAAATGATTCGGCAAATATGGAGGCTGGATTTCAAGAAGCTTTGAACGAAGGAAACAGGCACATTGAAAGAGTTGAGGAAGGAGAATTTGAAAAAGATGAAAAGTATGATGAAGGTGTAATATTGGTCACACAAAGAATGGAAGGGGAGTATCCTCTTGTGGAGAATCTGAGATCAGAAGGAATGATAGCTAGGAAGATGCCATCAGAGAAGAAAAAAGGACTTTGGAGGAGGAAAGCAAGAATGGGATCTGCTGGAAAAATTCAAGGAGAAAGGGCTGGCACCTCCCCCAATTTTGTATAA

Coding sequence (CDS)

ATGGAGAAAGAGAAAGCAAATCATATTATGCTAGATGGAGAGGACATGAAAGAAATTAAAGATCACCTGGATCATTGTATTGTGGGGAAACTCCTTTCTAACCGTATCATAGCTCCATTTGCCATCAAGAATGCTTTGAGAGGAGCCTGGAAAACAAGGAAGAATTTCAGTGTAGAGTCTATTGGAAAGAACATTTTCAATTTCAAGTTTGAATGCCAAGGAGACAGAGATTGGGTTATGAGCAATGGACCATGGACATTTGATAAATCTATGATAGTTCTTGAATTCCCTAAAGCCAACCAAAGATCAATGGAGATGGATTTCAAGAAAGCAGAATTCTGGATTAGACTATTAAATTTACCAATGGGTTACAGAAACAAAAAAGTGGCAAGGAAAATAGGGGATAGCATTGGTGAGTTTCTTGAAGGAGGAGAAGGAGAAGAGGACATCAGTTGGGGCCAAAGTATTCGTATCAGAGTAAGGCTAGATATAACTAAGCCACTGCTGAGAGGTTTTATGCTCAAAGGTCAGGATATTGGAGAAGAGTGTTGGGTCACAATCCGTTACGAAAGACTGTCGGAATTCTGCTTTCTATGTGGCAAGATCGGACACGTAGCAAAGGAGTGCGAGGGGAAAAAAGGAATGGAGGAAAGGAACATGGACAAGCTGGAATTTGGGAATTGGCTGAGGTTCCAAAGCTTCTCAAGATTCAGCAAGAAACCAGAATCCCCAAAAGACACAAGTAACACCCAAGATCCTCAAAGAGACAAGACGGAAGAAGGCTTAAAAGAAAAAGGAAGAGGGACTGAATATGATATTAAAGGCAAAGTGGTCATAGAAAATATTCTGGAAGATGAGGAGGGGTTTTATGAATTGAGGAGTAAAAGAGATGAAGGAACGTCTTATTGGACACATGATTTAAATGATTCGGCAAATATGGAGGCTGGATTTCAAGAAGCTTTGAACGAAGGAAACAGGCACATTGAAAGAGTTGAGGAAGGAGAATTTGAAAAAGATGAAAAGTATGATGAAGGTGTAATATTGGTCACACAAAGAATGGAAGGGGAGTATCCTCTTGTGGAGAATCTGAGATCAGAAGGAATGATAGCTAGGAAGATGCCATCAGAGAAGAAAAAAGGACTTTGGAGGAGGAAAGCAAGAATGGGATCTGCTGGAAAAATTCAAGGAGAAAGGGCTGGCACCTCCCCCAATTTTGTATAA

Protein sequence

MEKEKANHIMLDGEDMKEIKDHLDHCIVGKLLSNRIIAPFAIKNALRGAWKTRKNFSVESIGKNIFNFKFECQGDRDWVMSNGPWTFDKSMIVLEFPKANQRSMEMDFKKAEFWIRLLNLPMGYRNKKVARKIGDSIGEFLEGGEGEEDISWGQSIRIRVRLDITKPLLRGFMLKGQDIGEECWVTIRYERLSEFCFLCGKIGHVAKECEGKKGMEERNMDKLEFGNWLRFQSFSRFSKKPESPKDTSNTQDPQRDKTEEGLKEKGRGTEYDIKGKVVIENILEDEEGFYELRSKRDEGTSYWTHDLNDSANMEAGFQEALNEGNRHIERVEEGEFEKDEKYDEGVILVTQRMEGEYPLVENLRSEGMIARKMPSEKKKGLWRRKARMGSAGKIQGERAGTSPNFV

Homology

[Close]

BLAST of Lcy10g008510 vs. ExPASy TrEMBL
Match: A0A6J1DU55 (uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023135 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 1.9e-45
Identity = 98/258 (37.98%), Postives = 155/258 (60.08%), Query Frame = 0


Query: 11  LDGEDMKEIKDHLDHCIVGKLLSNRIIAPFAIKNALRGAWKTRKNFSVESIGKNIFNFKF 70
           +D + +K  +  L + +VGKLL+ RII+   +   L  AWK     +VESIGKN+F F F
Sbjct: 26  VDVDAVKMAEQGLAYSLVGKLLAKRIISADVLSRVLLLAWKVEHQLTVESIGKNLFLFHF 85

Query: 71  ECQGDRDWVMSNGPWTFDKSMIVLEFPKANQRSMEMDFKKAEFWIRLLNLPMGYRNKKVA 130
             + D + VM  GPW FDK++IVL+ P +++   E++F +  FWI L +LPM + NK +A
Sbjct: 86  CRECDMNRVMKTGPWFFDKALIVLQKPCSSKNISELEFNRVAFWIHLFDLPMSWLNKTMA 145

Query: 131 RKIGDSIGEFLEGGEGEEDISWGQSIRIRVRLDITKPLLRGFMLKGQDIGEECWVTIRYE 190
            ++G++IG F++    E+  SWG S+RIRV +DITKPL RG  +        CW+ I+YE
Sbjct: 146 IRLGNAIGNFVDVDCNEKGFSWGASLRIRVLIDITKPLRRGIKINIDGPMGGCWIPIQYE 205

Query: 191 RLSEFCFLCGKIGHVAKECEGK-KGMEERNMDKLEFGNWLRF---QSFSRFSKKPESPKD 250
           RL +FC+ CG IGH + +C+ +    ++ +    E+G WLRF   ++ ++  +K +SP  
Sbjct: 206 RLPDFCYFCGVIGHSSHDCDARYLAAQDDSRATSEYGPWLRFVGSKAGAQKGRKGKSPAR 265

Query: 251 TSNTQDPQRDKTEEGLKE 265
             +      +  E G++E
Sbjct: 266 EDSCGSSSMNSKERGVEE 283

[Close]

BLAST of Lcy10g008510 vs. ExPASy TrEMBL
Match: A0A6J1BSZ1 (uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005481 PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 6.6e-38
Identity = 80/217 (36.87%), Postives = 125/217 (57.60%), Query Frame = 0


Query: 23  LDHCIVGKLLSNRIIAPFAIKNALRGAWKTR-KNFSVESIGKNIFNFKFECQGDRDWVMS 82
           L+  ++ KLLS R I+   +KN L+ AWK   K FSV+ IG NIF F F    DR+ ++ 
Sbjct: 38  LELSLICKLLSKRSISCTVLKNTLKIAWKLDCKAFSVDIIGFNIFLFNFNRSSDRNRILR 97

Query: 83  NGPWTFDKSMIVLEFPKANQRSMEMDFKKAEFWIRLLNLPMGYRNKKVARKIGDSIGEFL 142
            GPWTFD+++I+++ P +  + ++MDF+    W+   +L +   NK +A ++G++IG F 
Sbjct: 98  MGPWTFDRALIIIDNPVSLTKPLDMDFRNVSLWVHFFDLSLACMNKTMATRLGNAIGLFE 157

Query: 143 EGGEGEEDISWGQSIRIRVRLDITKPLLRGFMLKGQDIGEECWVTIRYERLSEFCFLCGK 202
           +      +  WG  +R+RVR D+ KPL RG  L        CW+ I+YERL +F + CG+
Sbjct: 158 DVESNANNFCWGSCLRVRVRFDVMKPLHRGIKLNLDGPMGGCWIPIQYERLPDFRYHCGR 217

Query: 203 IGHVAKECEGKKGMEERNMDKLEFGNWLRFQSFSRFS 239
           + H+ K+C       +     L++G WLRFQ     S
Sbjct: 218 LDHILKDC--SDCCVDSVSKNLQYGPWLRFQGHKNSS 252

[Close]

BLAST of Lcy10g008510 vs. ExPASy TrEMBL
Match: A0A5C7IJL3 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_004194 PE=4 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 1.1e-37
Identity = 96/274 (35.04%), Postives = 151/274 (55.11%), Query Frame = 0


Query: 3   KEKANHIMLDGEDMKE--IKDHLDHCIVGKLLSNRIIAPFAIKNALRGAWKTRKNFSVES 62
           K++   I    ED+ E  ++D +DHC+VGK+LS + +   A  + +   W       +ES
Sbjct: 94  KDEDREIHQISEDVGEEGVQD-VDHCLVGKVLSGKRVNREAFISVIEHLWNPFGKVEIES 153

Query: 63  IGKNIFNFKFECQGDRDWVMSNGPWTFDKSMIVLEFPKANQRSMEMDFKKAEFWIRLLNL 122
           +G+N+F F F+   DR  V   GPW FDKS+IVLE P+      ++ F KA+FW+++ ++
Sbjct: 154 VGENVFMFHFQNPEDRSRVWQRGPWHFDKSLIVLEMPEGTGEIAKLRFNKADFWVQIHDI 213

Query: 123 PMGYRNKKVARKIGDSIGEFLEGGEGEEDISWGQSIRIRVRLDITKPLLRGFMLKGQDIG 182
           P+   N++ A+ + + IGE +E      D  WG+ +R++VR+DI++PL R   L     G
Sbjct: 214 PIMCMNRRSAKWLAEQIGEVIEIPSESRD-CWGKFLRVKVRIDISRPLKRWLRLSLDKSG 273

Query: 183 EECWVTIRYERLSEFCFLCGKIGHVAKEC---EGKKGMEERNMDKLEFGNWLRFQSFSRF 242
               V ++YER+ EFCF CG++GH   EC   E KK   E N  +  FG W+R       
Sbjct: 274 NVVVVGLKYERMPEFCFACGRVGHGINECSDIEAKKEAMEGNNPR--FGLWMR------- 333

Query: 243 SKKPESPKDTSNTQ----DPQRDKTEEGLKEKGR 268
           +   + PKD S++Q       RDK+    +E G+
Sbjct: 334 APTTDKPKDKSSSQLSGGSSVRDKSMGSSQEVGK 356

[Close]

BLAST of Lcy10g008510 vs. ExPASy TrEMBL
Match: A0A6J1D765 (uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017902 PE=4 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 1.1e-37
Identity = 79/223 (35.43%), Postives = 136/223 (60.99%), Query Frame = 0


Query: 21  DHLDHCIVGKLLSNRIIAPFAIKNALRGAWKTRKNFSVESIGKNIFNFKFECQGDRDWVM 80
           D++  C+V KL +++ I+  AI++ ++  W+   +   E +G NI+   F+   ++  V+
Sbjct: 33  DNVKLCVVAKLHTSKRISAEAIRSVMKSVWRVHNSTRFEPLGMNIYVILFKSLSEKSRVL 92

Query: 81  SNGPWTFDKSMIVLEFPKANQRSMEMDFKKAEFWIRLLNLPMGYRNKKVARKIGDSIGEF 140
           S+GPWTF+KS++VL  P A  + ++M+F    FWI++ N+P    + ++A  +G  +G+ 
Sbjct: 93  SSGPWTFNKSLLVLTSPTATNQPLDMNFNFCAFWIQIHNIPFECISTEMANILGAKLGD- 152

Query: 141 LEGGEGEEDISW-GQSIRIRVRLDITKPLLRGFMLKGQDIGEECWVTIRYERLSEFCFLC 200
           +E  EG+    W G  IR+RV++D++KPL RG  LK  D G++ W  +RYE+L +FC+ C
Sbjct: 153 VEEIEGDGADGWAGPFIRVRVKIDVSKPLRRGIKLKNSD-GKDIWCPLRYEKLPDFCYEC 212

Query: 201 GKIGHVAKECEGKKGMEERNMDKLEFGNWLRFQSFSRFSKKPE 243
           GKIGH  +ECE +  +   N  + ++G+WLR     +    PE
Sbjct: 213 GKIGHSGRECEQRSKVVTTNSPE-QYGDWLRATLLKKSVSHPE 252

[Close]

BLAST of Lcy10g008510 vs. ExPASy TrEMBL
Match: A0A5C7IHI0 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_003470 PE=4 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 1.9e-37
Identity = 94/269 (34.94%), Postives = 149/269 (55.39%), Query Frame = 0


Query: 3   KEKANHI--MLDGEDMKEIKDHLDHCIVGKLLSNRIIAPFAIKNALRGAWKTRKNFSVES 62
           K++ N +  + +G D   ++D +DHC+VGK+LS + +   A K  +   W    N  +E 
Sbjct: 16  KDEDNEVRQVSEGIDRDGVED-VDHCLVGKVLSGKRVNREAFKTVIEQLWSPFGNVEIEV 75

Query: 63  IGKNIFNFKFECQGDRDWVMSNGPWTFDKSMIVLEFPKANQRSMEMDFKKAEFWIRLLNL 122
           +G N F F F    DRD +   GPW FD+S+IVLE P+      ++ F KAEFW+++ ++
Sbjct: 76  VGDNTFMFYFNNPEDRDRIWQRGPWHFDRSLIVLEKPEGMGDISQLCFNKAEFWVQIHDI 135

Query: 123 PMGYRNKKVARKIGDSIGEFLEGGEGEEDISWGQSIRIRVRLDITKPLLRGFMLKGQDIG 182
           P+   NK++A+ + + IG  +E    E    WG+ +R++V +DI+KPL R   LK     
Sbjct: 136 PIMCMNKRMAKWLAEQIGRVVE-IPMESRECWGKFLRVKVLIDISKPLKRWLRLKLDRSD 195

Query: 183 EECWVTIRYERLSEFCFLCGKIGHVAKECEGKKGMEER-NMDKLEFGNWLRFQSFSRFSK 242
               V ++YERL EFC+ CGK+GH   +C   +  +E     K +FG+WLR     +F  
Sbjct: 196 NIVVVGLKYERLPEFCYACGKVGHGINKCTDTEAKKEAIEGPKTKFGSWLRASPTDKFKL 255

Query: 243 KPESPKDTSNTQDPQRDKTEEGLKEKGRG 269
           K  S + +  T   +R  +EEG + + RG
Sbjct: 256 K-SSSQGSGGTSVKER-SSEEGFETENRG 280

[Close]

BLAST of Lcy10g008510 vs. NCBI nr
Match: XP_022156185.1 (uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncharacterized protein LOC111023135 [Momordica charantia])

HSP 1 Score: 193.4 bits (490), Expect = 3.9e-45
Identity = 98/258 (37.98%), Postives = 155/258 (60.08%), Query Frame = 0


Query: 11  LDGEDMKEIKDHLDHCIVGKLLSNRIIAPFAIKNALRGAWKTRKNFSVESIGKNIFNFKF 70
           +D + +K  +  L + +VGKLL+ RII+   +   L  AWK     +VESIGKN+F F F
Sbjct: 26  VDVDAVKMAEQGLAYSLVGKLLAKRIISADVLSRVLLLAWKVEHQLTVESIGKNLFLFHF 85

Query: 71  ECQGDRDWVMSNGPWTFDKSMIVLEFPKANQRSMEMDFKKAEFWIRLLNLPMGYRNKKVA 130
             + D + VM  GPW FDK++IVL+ P +++   E++F +  FWI L +LPM + NK +A
Sbjct: 86  CRECDMNRVMKTGPWFFDKALIVLQKPCSSKNISELEFNRVAFWIHLFDLPMSWLNKTMA 145

Query: 131 RKIGDSIGEFLEGGEGEEDISWGQSIRIRVRLDITKPLLRGFMLKGQDIGEECWVTIRYE 190
            ++G++IG F++    E+  SWG S+RIRV +DITKPL RG  +        CW+ I+YE
Sbjct: 146 IRLGNAIGNFVDVDCNEKGFSWGASLRIRVLIDITKPLRRGIKINIDGPMGGCWIPIQYE 205

Query: 191 RLSEFCFLCGKIGHVAKECEGK-KGMEERNMDKLEFGNWLRF---QSFSRFSKKPESPKD 250
           RL +FC+ CG IGH + +C+ +    ++ +    E+G WLRF   ++ ++  +K +SP  
Sbjct: 206 RLPDFCYFCGVIGHSSHDCDARYLAAQDDSRATSEYGPWLRFVGSKAGAQKGRKGKSPAR 265

Query: 251 TSNTQDPQRDKTEEGLKE 265
             +      +  E G++E
Sbjct: 266 EDSCGSSSMNSKERGVEE 283

[Close]

BLAST of Lcy10g008510 vs. NCBI nr
Match: XP_028122006.1 (uncharacterized protein LOC114319195 [Camellia sinensis])

HSP 1 Score: 176.8 bits (447), Expect = 3.8e-40
Identity = 83/226 (36.73%), Postives = 129/226 (57.08%), Query Frame = 0


Query: 9   IMLDGEDMKEIKDHLDHCIVGKLLSNRIIAPFAIKNALRGAWKTRKNFSVESIGKNIFNF 68
           + + GE    +    D C+VGKLL+ R     A+KN L   W+  K   V  IG N+F F
Sbjct: 22  VRIGGESTSLMMGKSDMCLVGKLLTRRPFNVEAMKNTLLSVWQPTKGMQVRVIGDNLFVF 81

Query: 69  KFECQGDRDWVMSNGPWTFDKSMIVLEFPKANQRSMEMDFKKAEFWIRLLNLPMGYRNKK 128
            F    D+  V+S+GPWTFDK +++L     N +  ++   + +FW+ + NLP+   NKK
Sbjct: 82  VFGHVVDKRRVLSDGPWTFDKHLLMLGEMDPNVQPSDIQLTRVQFWVHVCNLPLVLMNKK 141

Query: 129 VARKIGDSIGEFLEGGEGEEDISWGQSIRIRVRLDITKPLLRGFMLKGQDIGEECWVTIR 188
           V   +G+++G+F++    +  I WG+++RIRV LD+ KPL RG  L      E  WV  +
Sbjct: 142 VGEIVGNAVGQFIDMDYEDGGIVWGRTMRIRVALDVRKPLRRGMKL-ALSSAEPIWVDFK 201

Query: 189 YERLSEFCFLCGKIGHVAKECEGK-KGMEERNMDKLEFGNWLRFQS 234
           YERL  +C+ CG++GH  +EC+ K    +   +D L++G WLR  +
Sbjct: 202 YERLPIYCYFCGRLGHSERECDDKLSSADGSRVDSLQYGAWLRMDN 246

[Close]

BLAST of Lcy10g008510 vs. NCBI nr
Match: XP_028124075.1 (uncharacterized protein LOC114321128 [Camellia sinensis])

HSP 1 Score: 173.7 bits (439), Expect = 3.2e-39
Identity = 80/226 (35.40%), Postives = 130/226 (57.52%), Query Frame = 0


Query: 9   IMLDGEDMKEIKDHLDHCIVGKLLSNRIIAPFAIKNALRGAWKTRKNFSVESIGKNIFNF 68
           + + G+    +    D C+VGKLL+ R     A+KN L   W+  K   V  IG N+F F
Sbjct: 22  VRIGGDSTSLMMGKSDMCLVGKLLTRRPFNVEAMKNTLLSVWQPTKGMQVRVIGDNLFVF 81

Query: 69  KFECQGDRDWVMSNGPWTFDKSMIVLEFPKANQRSMEMDFKKAEFWIRLLNLPMGYRNKK 128
            F    D+  V+SNGPWTFDK +++L     N +  ++     +FW+ + NLP+   NK+
Sbjct: 82  VFGHVVDKRRVLSNGPWTFDKHLLMLGEMDPNVQPSDIQLTGVQFWVHVCNLPLVLMNKQ 141

Query: 129 VARKIGDSIGEFLEGGEGEEDISWGQSIRIRVRLDITKPLLRGFMLKGQDIGEECWVTIR 188
           V + +G+++G+F++    +  I+WG+++RIRV +D+ KPL RG  L      +  WV  +
Sbjct: 142 VGQIVGNAVGQFIDMDYEDGGIAWGRTMRIRVAIDVRKPLRRGMKL-ALSSADPIWVDFK 201

Query: 189 YERLSEFCFLCGKIGHVAKECEGKKGMEE-RNMDKLEFGNWLRFQS 234
           YERL  +C+ CG++GH  +EC+ K    +   +D L++G WLR  +
Sbjct: 202 YERLPIYCYFCGRLGHSDRECDDKLSFADGTRVDSLQYGAWLRMDN 246

[Close]

BLAST of Lcy10g008510 vs. NCBI nr
Match: XP_028071384.1 (uncharacterized protein LOC114273772 [Camellia sinensis])

HSP 1 Score: 169.9 bits (429), Expect = 4.7e-38
Identity = 82/234 (35.04%), Postives = 132/234 (56.41%), Query Frame = 0


Query: 9   IMLDGEDMKEIKDHLDHCIVGKLLSNRIIAPFAIKNALRGAWKTRKNFSVESIGKNIFNF 68
           + + G+    +    D C+V KLL+ R     A+K+ L   W+  K   V  IG N+F F
Sbjct: 22  VRIGGDSTSLMMGKSDMCLVSKLLTRRPFNVEAMKSTLLSVWQPTKGMQVRVIGDNLFVF 81

Query: 69  KFECQGDRDWVMSNGPWTFDKSMIVLEFPKANQRSMEMDFKKAEFWIRLLNLPMGYRNKK 128
            F    D+  ++SNGPWTFDK +++L     N +  ++     +FW+ + NLP+   NKK
Sbjct: 82  VFGHVVDKRRILSNGPWTFDKHLLMLGEMDPNVQPSDIQLTWVQFWVHVCNLPLILMNKK 141

Query: 129 VARKIGDSIGEFLEGGEGEEDISWGQSIRIRVRLDITKPLLRGFMLKGQDIGEECWVTIR 188
           V + +G+++G+F++    +  I+WG+++ IRV LD+ KPL RG  L    + E  WV  +
Sbjct: 142 VGQIVGNAVGQFIDMDYEDGGIAWGRTMLIRVALDVRKPLRRGMKLALSSV-EPIWVDFK 201

Query: 189 YERLSEFCFLCGKIGHVAKECEGK-KGMEERNMDKLEFGNWLRFQSFSRFSKKP 242
           YERL  +C+ CG++GH  +EC+ K    +   +D L++G WLR  +    SK P
Sbjct: 202 YERLPIYCYFCGRLGHSDRECDAKLSSADGTRVDSLQYGAWLRMDNIK--SKGP 252

[Close]

BLAST of Lcy10g008510 vs. NCBI nr
Match: XP_022132681.1 (uncharacterized protein LOC111005481 [Momordica charantia])

HSP 1 Score: 168.3 bits (425), Expect = 1.4e-37
Identity = 80/217 (36.87%), Postives = 125/217 (57.60%), Query Frame = 0


Query: 23  LDHCIVGKLLSNRIIAPFAIKNALRGAWKTR-KNFSVESIGKNIFNFKFECQGDRDWVMS 82
           L+  ++ KLLS R I+   +KN L+ AWK   K FSV+ IG NIF F F    DR+ ++ 
Sbjct: 38  LELSLICKLLSKRSISCTVLKNTLKIAWKLDCKAFSVDIIGFNIFLFNFNRSSDRNRILR 97

Query: 83  NGPWTFDKSMIVLEFPKANQRSMEMDFKKAEFWIRLLNLPMGYRNKKVARKIGDSIGEFL 142
            GPWTFD+++I+++ P +  + ++MDF+    W+   +L +   NK +A ++G++IG F 
Sbjct: 98  MGPWTFDRALIIIDNPVSLTKPLDMDFRNVSLWVHFFDLSLACMNKTMATRLGNAIGLFE 157

Query: 143 EGGEGEEDISWGQSIRIRVRLDITKPLLRGFMLKGQDIGEECWVTIRYERLSEFCFLCGK 202
           +      +  WG  +R+RVR D+ KPL RG  L        CW+ I+YERL +F + CG+
Sbjct: 158 DVESNANNFCWGSCLRVRVRFDVMKPLHRGIKLNLDGPMGGCWIPIQYERLPDFRYHCGR 217

Query: 203 IGHVAKECEGKKGMEERNMDKLEFGNWLRFQSFSRFS 239
           + H+ K+C       +     L++G WLRFQ     S
Sbjct: 218 LDHILKDC--SDCCVDSVSKNLQYGPWLRFQGHKNSS 252

[Close]

BLAST of Lcy10g008510 vs. TAIR 10
Match: AT3G42140.1 (zinc ion binding;nucleic acid binding )

HSP 1 Score: 63.9 bits (154), Expect = 3.3e-10
Identity = 41/160 (25.62%), Postives = 70/160 (43.75%), Query Frame = 0


Query: 54  KNFSVESIGKNI----FNFKFECQGDRDWVMSNGPWTFDKSMIVLEFPKANQRSMEMDFK 113
           KN   E +G+ +      F F+ +     ++  GPW+F+  M V++  +  +   + +FK
Sbjct: 46  KNVDEEVVGRILEIHKIEFLFQSEESMFSILRRGPWSFNDWMCVIQ--RWTKLHSDAEFK 105

Query: 114 KAEFWIRLLNLPMGYRNKKVARKIGDSIGEFLEGGEGEEDISWGQSIRIRVRLDITKPLL 173
           +  FWI++  +P+ +   ++   IG+ +G FLE   G  D+S                  
Sbjct: 106 RIPFWIQIRGIPLRFLTARIITSIGERMGLFLETNLG-RDVS------------------ 165

Query: 174 RGFMLKGQDIGEECWVTIRYERLSEFCFLCGKIGHVAKEC 210
              +LK Q           YE+L  FC  CG + H A EC
Sbjct: 166 ---VLKFQ-----------YEKLKNFCTTCGMLSHDASEC 170

The following BLAST results are available for this feature:

BLAST of Lcy10g008510 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy10g008510 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DU55	1.9e-45	37.98	uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A6J1BSZ1	6.6e-38	36.87	uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005...	[more]
A0A5C7IJL3	1.1e-37	35.04	CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_00419...	[more]
A0A6J1D765	1.1e-37	35.43	uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]
A0A5C7IHI0	1.9e-37	34.94	CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_00347...	[more]

BLAST of Lcy10g008510 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022156185.1	3.9e-45	37.98	uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncha...	[more]
XP_028122006.1	3.8e-40	36.73	uncharacterized protein LOC114319195 [Camellia sinensis]	[more]
XP_028124075.1	3.2e-39	35.40	uncharacterized protein LOC114321128 [Camellia sinensis]	[more]
XP_028071384.1	4.7e-38	35.04	uncharacterized protein LOC114273772 [Camellia sinensis]	[more]
XP_022132681.1	1.4e-37	36.87	uncharacterized protein LOC111005481 [Momordica charantia]	[more]

BLAST of Lcy10g008510 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G42140.1	3.3e-10	25.63	zinc ion binding;nucleic acid binding	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025558	Domain of unknown function DUF4283	PFAM	PF14111	DUF4283	coord: 16..160 e-value: 6.1E-29 score: 100.4
IPR025836	Zinc knuckle CX2CX4HX4C	PFAM	PF14392	zf-CCHC_4	coord: 162..210 e-value: 1.1E-14 score: 53.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 375..406
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 237..266
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 239..266
None	No IPR available	PANTHER	PTHR31286:SF84	SUBFAMILY NOT NAMED	coord: 16..259
IPR040256	Uncharacterized protein At4g02000-like	PANTHER	PTHR31286	GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1.8-LIKE	coord: 16..259
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 196..209 score: 9.916444
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 194..217

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy10g008510.1	Lcy10g008510.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding