Lcy10g008430 (gene) Sponge gourd (P93075) v1

Overview
NameLcy10g008430
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionPentatricopeptide repeat-containing protein
LocationChr10: 34102293 .. 34116288 (-)
RNA-Seq ExpressionLcy10g008430
SyntenyLcy10g008430
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCTCCTTGTTCGGCAGCCATTCAGTCCCTCCAACGTCCGGCGAGCGTCCCCTGCAGTGGGTGGTGCTCTCCGTCTCGATTCCTCTCCGTCCATCGTCTTCTCCGGCAACGTGGGTGGTGCTACCGTGCGGCGTTCGTCCTTTCGGCCACAGCAGGTGCGTAATCCTTCTCTTCTTGTTGTGTCACGCTAGTCCCGCCCCTCTCACTCACTCGCCTTCTGTTTTAGGCGTGTTTCCGGCCCCTCTCACTCACCTTCTGAAATTCGACATCCGTCTAGGTCTAACCCTTTTCTCAAGAAAAAGTTTGTTAAATTTAAAAGCGTTCTTAAAGGAGTTGATGATGGAGAAAAACAAAAGAAATTGGAGGAGATTAAACGTTGGAAGAAGGCCATGAAAGAGATTAGCACTTGAACTGGAGTTGTCATCACCAAAACCAGATAAATTTCTAACACCACCATTCTTTCAAATTTAACTTCTTTCCTTATCTCTTTGGATTGGTTTCAAACATCTGAATTGGAGAAATAAAAATAATCAAAGTCTTGATAACAAACTCCATTAAGCATTTTCATGTGTGAGTAATATTTATTTGTGCGGGTGAAAAAAGCAAATCTCAATGTTTTAAGTTTGATTTTTTCTCCATGGCTTTTTAAAATTTCATAATCGGATCCTAATTATTAGGCTATTTAGTTTTCAACGCTTTACTTTTCTTCTCTAAGGATTAAGCTTGGTGTCTATTTAATTTGGTCTTCGAGGTTCAAAAACTTACATTTTAGACATGTGTTTATGATAACTATTTTGTTTTTAAGTTTTAGTTTTTGATAATCAATTACCCATTGAAGTTAGCTTTCTTTTTCAAGGTACCCACCACGTTTGAAAGTCCAATTGTCGTTTGGAGCGGATTTGGAAGCTTGGACAGCAAGCTTGTTGGCTGATTTAGGTGAGTTTTTGGGAGTTAAACCTCTTCCCGAAAGTTAATTATCTCCTCGTGACTTTTTATTCAAAGAGGTTTATGAGTTGTTGTATGTTTTCCTCTCTTGTGTAGTTGGTTAGGAGCTTGGAAGCTAAAGAGTGTATTCGTTTTGCCAAACAACTTAATAGCTAAAGTAAGTAGTTATTGGATTTCAGTTTCAAGCTTAGCCCCATAGCATGTTTGTTGGAATTGATAAATGACGAGTTTGAAACTTGAATTAGTTACTTTTGAGAATTGGCATGCTAGCATGAGCTAGTTGTGTGCCTTTAAATTGTCCTTGGATTTCGATGAGCATGATAGTCGTTCGCTTAAGCATGTTGTGGAAAGCTTGTTCTTTCTAGGAGTGTTAAATGATAACTTAGTACACCATCATTTTCTAGATGGATATTCTTCCACTGTGATCTTTATGTTGTGTTCAATGTCTGAGCTAAAATATTTGAGCAGGTTTTGCATTTGTATAAATCGTGGAAGATTTTTGTATGATAGTATAAAAAATGTCATTTATGTTACTCTTATTGCCTCGTATAGGTTCCTGGTTCTTGTGTGTAGTTTTTGGTTATGTTCTTACATTTAGTTCTTTTGAGCATGAGATTGTTTAAGATGACTGGTTAGATCATGTAAAGTAGTTTAGTTTCACTTGCTTTCCATTGAGTTTAGTTTCACTTGCTAAGATGAATGATTAGATCACGTAAGCACTTAGTTATTTTAAGGAGTTTAGTTGTTTTGGTTGATAAGCTGAGTTTAGTTCTTTTAATAAGTTCGGTTGTTTGTGTCGATAAATTTTGTTGTTATGCTTGTAAGCATTTTAATCTGTCGTGCCATTGTTTGTGTTCTAAGAAGTATTTTGAATTTTCTTTCCCCCTTGTTTCTCTCTTCTTAGACATTGTTGAAATGCTTAGATTATATATTAAACATACTTTGAGATAACTCTCAATTCTTCGCTTTATTTGCCTACATCATAATGAATAATCTACTTAGTTTGCATCTTAATTATGCCTTTGATGAAGATTATTGAATGGTCATTAATGTTACATGTTTTACTATTTCAATATATATTGTAGTTCTCAGTGCAAACATAAGAGTTTGTATTAATTTGGGGTCAAGAAGTTTAAATTTGTACAACATGAGTTTGAATTGGAGCCATTTCAAAATTTTGAGTACTCAGATGTATGAACTCATTCTATGAACCAAATGAGTTCATACGACGAGACTTGGGTTTTATACCTGTATTGGTAGGATCAGATCTCCAATTGTCAGGGCCATGTTCCTGGATGTAGGGGACAAGAATGATATCTTCTTAGGGTTAACCCAAATTTAACAAGTTTGGAGGATGTATAGCTAGTTTGTGATGCTCACAAACTTCATGCCTAACTTGTTATGTCTATTTTGAGTGTTGGTATATGAGTTGTCTAGTCTCACTAAGTTTAGACTGCAATCCACTTTAGTGACTTCTTGTCTCAACTGATTTGACTATGACTTGGTAACTTTGGTACTCTTTGGCCCAACATAAACTAATCTAACCTAACTAGCGCATCTCACTTCTCTAGATGGTTGGTAGGTTTAATTTTGATCTATCCTTTCGCCTTTGATCTATCCAATAACACTTAGTCTAGGTAGTTTCTAGTCATACTTGATTGAGTTAGGACTCACTTGACATGATCAAGTTTCAATCCATATTTCAAGTTCGACTTCATTTCCTAGTTCTAGATGTATGAACTCATTCCATGAACCAAATGCTCCCTAATTTACATTAAACTACCATGTCGAGTATAGTCTTCACTTCCTAGTTCTATTTAATGTTTATGTCTGTATAGACATAAACATTCAAAAAAACATTTACTCGTCAAACCTTTAAGGGCCCTTGAAGAGGTGTAACCCCCTTGGTAACTTTGGTACTCTTTGACTTGGTATTGCTTGATTGCTATGACTATCCTGCAGTTATGGTAGTCATAGCTTAAAATTAGTTCATTTATTTGTTTCTAATGACTTGGTATTGCTTGATTGCTATGACTATCCTGCAGTTATGGTAGTCATAGCTTAAAATTAGTTCATTTATTTGTTTATAATGACTTGGTATTTACTTGATTGTTATGGCTATCCTGCAGTTATGGTAGTCATAGCTTGAAATTAGTTCATTTGTTTGTTTCTAATGACTTGGTATTATTTGGGATGTTTAGTTGTCTTCATTGATATGTTTAGTTGTTATGGTGTTGTTGAGTTGAGTTTGATTGCAAATGAATTTCATGATATTTGGGATAAGTGTTTAGGGAGTTGGACACCTTGTTGAGTTGTTCCATTTGCAAAGTTGAGTTTCGTTGTTTGATTTGTTAAGTTAATGTGTTGGGGGGGGGTCAATACCCTGTTGCACTTACGAGTTTACTTGTTTTCATTGATATGTTTAGTTGTCATAGTGTTTTTGAGTTGTGTTTGATTGCAATGACTTTCATGATATTTGGGATAAGTGTTTAGGGTATTGGACACCTTGTTGAAAGTTGTTCCATTTGCAAAGTTGAGTTTCTAAGTTGGAGTTGTTGAGTTATTCTATTTAGGGGAGTCAATACCTTGTTGCACTTAGTTCTTTTAACGGGTTATTGTGTAATTTTTTAAAGTTTAGTTTCACTTATTTTCCATTTAGTTGTTGTGTTTAGAAAGGTCGATACCTATTTGAACTTAAGTATTTTAACTAGTGCAGTTGTTGTGATGTTGATAAGTTTAGTCTCATTAAGTTCTTATCAATTTAGTTTCAGTTGTTTCAAGTTTTTGTTGTTGTAGGTTTAGTTTCATTGCTTTTGATGAGTTGTTTATCTCGATTTGAGTTATATCTCTCTAATTCAATTATTGAAGTTCATTTATTTGTTTCTAATGACTTGGTATTTTTTGTGTAAGCTGATTTAGTGGTCTTCGTTGATATGTTTAGTTGTTATCGTGTTGTTGTGTTGAGTTTGATTGCAATGACTTTCATGATATTTGGGATAAGTGTTTAGGGAGTTGGACACCTTGTTGAAAGTTGTTCCATTTGCAAAGTTGAGTTTCTAAGTTGGAGTTGTTGAGTTATTCTATTTAGGGGAGTCAATACCTTGTTGCACTTAGTTCTTTTAACGAGTTATTGTGTTTTTGAAAGTTTAGTTTCACTTATTTTCCATTTAGTTGTTGTGTTTAGAAAGGTCGATACCTATTTGTACTTGCGTATTTTAACTAGTGTAGTTGTCGTGATGTTGATAAATTTAGTTTAGTTTAGTTGTGATTTTGAATAGATGGGATTTCTTATGTTTTTAAGTTTCTGTTCATTATTTCTCATAAGTGTACTTGTGTTCATGTTTGATATTTTTCATTACTTGTTTAATTATTAAGTTTCATAGCTTTTAATGAGTTGTTTATCAATTATTCAATCTCAAGCTTACATATTCTAGTTCCTTTTATTTTTCAGCTTGGATGCACGAATCGTTTCGACAAGGGTCCCCTTTTTTGTATGGAAATGTGAAGAATGGAGGTTGGTTTTTTTGTTTGTGATCTTTTGTTAGTGAATCGTTTTGTATGTAAATGTGAAGAATGTAGGTTGTGATCTTTTGTGTTGTGAATCATTTTGTTAAGCAAACTTATTCACCTAGACACTTGAGATCATTTTAGAAAATGATCAATTTGTATATTCTAGACATGTTTCTTGATTATGGTTAATATGAAGGTGCATTTTCACTATAATTGGCATATTACATTTTCTATTTGATTAATTGTAGAATTGTTAATTAGTTTGAAGATGGTAATATTATTTTATTTACAGGTTTACTAATTGAATTAACTATTTATTTTTTAAATCATAAACAATTTTTAGCGACGTTTGATATAATGTCGGTAAACCATCATGGTACGGTGCGTTTCCAAAACCTCATCAAAAGCATACCACAAAAAAAAACTAGCATTCAGTTTTTAGTGACGGGTTAGCTTTCTTTTACCAGCGTTATCCACGTCACTAAAACTTCTTTTCTGTGACAAGTTTGACATGCTGACCACGTCACTGAATATTGTTTTCAGCGACAAACGGTTTGGATGTTACTGAAAGTATACAATTTAGTGACGTAATGACCATGTCACTGAATATCTTTTTCAGCGACAAAGGTTTGGATGTTACTGAAAGAATCTCTTTTAGTGACGTGCTATCTATGTCACTGAATATCATTTTCAGCGACAACGGGCCAGACGTTGCTAAAAGTGATCTTCAGTGACGTGTCCCCACGTCCCTACCTATCACTTACACCGGTGTGTAGACGTCACTGAAGATTACTTTCAGTAACGTCTACAGTAGTATGTCGCAAATACTTACGACTACGTAAATACAGCGACGGATGCAGCGACAAAGCTACGCGCGCCGCTGAAAGTTTTACCGACGCGTTTTTCGTTTCAGCGACATATTTTATACGCCACTGAAAGTGTTTTTTCTTGTAGACATTGAAAAGATTATAAGTGGAGACCTCACAATTTATAAGATACAAGGGTCACTCCACTCATTGCCAATTGGTTTTGAGATGGAACCCCATGTTATTTGATATTACCCACACTATCTCACGTTTTCCAACATTCAGTTTCGAACTCTGCTCTAAATTTTCCAATTTGTAGGTTTCACCATCTTTGAACGTCAACCGCAGCATTTCGGACTTAAAGTTGGCTTTTGACGACTACCCACTATCCAAACCATCCCGAATTGGATTACTCATTGCTCTTGGAGTCCATAATTTCGATTTCAAACTACAACAAAAATCAACCAGCAAGAATTGGAGAATCTTGGTATGGTTTGGTGAGTTTAGGCATCCCTCAGACCTTTTGGACTTCAATTAAATTATTAGTTTGGATTAGTTGATAATCATTGGGTGCTCTCAATTTTTAGTTCAGACACTCTTGGTGGGTCCTTTAGGTAAGGTTAATAAGGCGTTAAGAGTGTGTTCAAGTCCATTTGAACTTAGTCTAAGTAATTTAGAGTGGGCTCTAATCCTTGGAACACTTTTGCGGTATGTTTGAATTGGTATCGAAATGTTCGAATTGACCCTTACGGATTGGTTTTGGGTGAGAAAATCCTTACTAAACAGTCTTTTGGTTTTGAATAAGGTTTTCGAGCTAAGTTTTATCCTTTAGATATTATCTTTGTTGTTTAGGATTGTTTAGAACTGCTTGGGACCATTTAGAGCCTTGTGTAAGTAGTTTCTACCTATGGGTCTGTTTGAATGTGTGATTGCTTTGTTTCTGTTGAAAATACTTGAATTATTTTGGAATGATCTGTGCGTTGTGATAGATGGGCATGTTTGGCTTGTTGTTGTGGCTCTGTACTGTGTTTTTGTGTTGTGATCTTGGTTATGTCGAGGTTGTTGTAAATGCATAGTGTGGGCTCATTGGGTTGAGTGTTTGGAGCATGCCTTGTAAATCATGCGTTGGGATGTGTTAGGTGCGTTGCACGATGCGCAATTCATGTGTTTGGTGTGTTATATGACGTTTAAACCATGTGTTGGGATGACGAGGTTTTTTTTCTTATTTTCTTTATTTTCTTTAATTCTCCAAAATAGAAAATAAATTCTATTCCAATGACTGAGGAGCCCCATCCGCCTTATTGAGAGATAGGAAATTTCTTATGGCAGGCGAGAATTTGTGCTATTGTTTGGGGGCTTTTGGGGAGAGAGAAACAATAGAACTTTTAGAGGGTCAGAGAGATGTCTTAATGATGTTTGGACCTTGGCTAAATACTATGTTTCTCTTTTGTAATTATCCTCTAGGTCTAATTCTTTTGGATTGGAGCCCCTTTATATACTGGGGTTTCCTCTTCTGGAGGACTTGGTTTCTTTTGTATGACCTTGTATTCTTTCATTTTTTTTTTCTCAAAGTGTGGAATCATTATAAAAAAATGTTCCTATAAATAAAAGGGGAAAAAGGTTAGGGCGTTCTATTAAAAACCAAATTCAATATCTTCTCCAATTTAAACTCCTAAAACATTTGGGAGAACCTAATTGAAAAAGGATTGGAATTTCTTTTAATTTGGAGATAAATTCTAAAAATTTAATTTACCAAAATAAAGGGATTAAACTCAAATTCAAATTTTTGGATTTCGAACTTTGAATAGATCCAATTACTTCAAAAATGCTTAATTTTGAAACGTGGGATGTCACAATGTCTTTCTTCTCACCGACTAAAATTAAGAATTGTCGCTTAGTACGCTTTATGTACTACCCACCACTACGTTTTGTATATGATGAGGACTATTATGAACTTAGTGATGTTGAAGAGGAGGCATGAGAAGAGATAGACCATTGGATGATTCTAAAAAAACTTAGACCATTATTTTTGTTTATTGAGAGTTATTTGGAGCTCGTCTTTAAGATTATTGAAGTTGGTTGATCTTTTTATGTTTAGACTATGGGTGTGGATTATTGTTCTTAGGAAGAATGAATTTTGTTTTTTAATAGACCTATTCTTTTGGAAATGTAGAATTATTGTTTATTAGGTATTAAGTTTATGGTTAGTTTTATAGCATATCTCATCATGCTGTTGAAATTTTGGAGTCATTACAATTGATATCAGAGTGGAGTTGGGCTTGTAAATTGACCTAGGAACTAGGTTACTAGGTTGTTGAGTTAATTAGGCTTAATGGTCTTTATACAAAATTATTGTTATATTGTTTGATTTGTATGGATTATTGACCTTCCATGAATTATCTGTTTTGCGTGAATTATCTGCCTTGCATGATATTGCCTAGATTGTTTGCCTAATATGACTATTGTTTGGCTTTCTTGTTTGGCTCATATGATTATGTTCTGAATTGCATGTTTACCTTGGTTTATGAAATAGTTAGGCATAGGACGTTCCCTTTAGCTGGTAAGCTAAAATTTATTTCCTTGTGGTTGCGACTAGGTGTTGCTAGATTGTTCTTTATTACTTGCCTTTATTTTTAAGTTTGGAGCGTAGTGCTGATAACTTTTAGGCTTGTGTTGTAGTTTGAGTTCTTGGGAGTTTATTAAAGGAGAATGTTATCTTTTAATTGATGTTGGTTTATTCTAGTCATGCCTTTTTGTGTTGATCAATTGTTATAGACTTATAGTTCACTTTACTTTTATGGTTACTTTATTTGATGGAGTTTGATTTTAGGGTTAACTATGAGGTTTGTTTTGTTTTGTTTTTAATTGGATGGTTCTTTATATGCTAAAATGTGAGTGTGAATTTGATTTTCAGGTTGCTTGTATTTCTTTTTTATTGAAGCCTTTAAGTGGCAGTTTAGATTTATTGTTTATAAGATGTTAATCAAATGGGTAGTTTGGTAGGGTACCCCATGTTTTAGGTTGAAATTTTGAGGTATTACTGTAAGCATATTTATAATTAGGAAAATTGTAATGGGTGTCGAAATTTTAATGGCTAAGCAGATATAGCAAGTTTTATAAAAAATTGCAAATATAGCAAAATTTTTAAATCGTTTTTTTAAATTCTCGTTTTGCCACTGTTCTGATTTCTATTAGTGATAGAATCTATCACTGATAGAAATCAATCGCTGAGATTTCTATCATTGATAGAACCTATCACTTATAAAAATTTATCGCTGATAGAAACCAATAGTGTATTTGATAGAAACCAACAGTGTATTTGATCACGTGATAATTTGCACATGCCTTTTGTTTTTTGTTTTTTTTTTTTTGTTTTGTTTTGTTGAGGTCTCCCCTTTAAATTTCAACTCTCGCTTTGTGTTTTTCTTTTCTTTCGGTTCAATTTCCATATTGTTTTGTTTAAACATCTATAAAAACAAAATCAATGACATAGGTTTTAGAAACAAAAATGGTAGTTTTCTATCAGTAATAGAATAGATTTTGATAGAATAGTAATTTGATAGATTTTGATAGAATGATATTCCTCACTTCAATATGTAATTGTATTTATACAACTATCAGTGATAGAAAAACTTGGTCATCTTGACCAAGATCCCAGGCGAGAAATTATGAATCCCGACCTTTTTTTCCCCAAAATTTCGAAAAAGTATGTTATACAACCTGCTTGCTATCTAAAACGTGTAAAATCAACGTCAATTTTACATACTTATTTAAAAAATATTCACACTTTAAAGATTTTGAAGTGGGTCAAATGATATGTTAAGATTTTTAAAATTAGTTTTAAATGGTTGATAGGTGAAATTAGGTAGTCGATTGGTTGAAATTTAATTCATTTCATGAATGAAGATTGAGGAAGGAAAAAAATGATTTTTCACATTGTGGGTCCCACCAAAAAGTAGAAAATTTTGTAGACGATGGGTTAAAAAACAAGTTTTTAAAAAGTAGGTTAATTTTAAAACCCAAAACCTATTTAGGTCAAAATTGACAATTTCCCTCTATGCTTTGCTCTGTATGTTTGTTATGATAAAGTGAGGGAAATTGTCAATTTTGACCTAAATAGGTTTTGGATTTTAAAAATTAACTTACTTTTTAAAAACTTGTTTTTTTACCCATTCTCTACAAAGTTTTTGCTACTTTTTTGTGGGACCCACAGTGTGAAAAGTCTTTCTTGTCCTTCTTCAATCTTCATTAATAAAATGAATTACATTTCAACTAACCAACTAATTTCACCTAACAACCATTTAAAACTAAATTCAAAAATCTTAACATAGTTTTTGACCCACAATATTCTAAAAGTAATTGTCAAAACACGGGTGGATTCACATCAAAATCCTCATATTGTCAACATTTTTTAAATAGGTATGTATTACATGGTTTAGATAGCAAGGAGTTTGTATAACAAACTTTTTCGAAAATCTGAAAAAAAAAAAAAAAACATGAATCCCGCCCGAGATTCATAATTTTCCAGTCGGGATTCATCATTTCCCGACCGGGATTTCTTGGTCAGGACAACCAAGAAATCTTGATTAGGAAATCAACCAAGAAATTCTGAAGACAATTTTTTTTTACCAATTCCACTTTTTTTTTAAACTATATTAATGTTAGATACAAAATAATAAGAAAGGGAGGAAGAAAGAAAAATAATAATAATGTTGGGCCACAATTTTTTACTAAGAAATTCCAATCAAAATTTAACCAAGAAATTTTGAAAACAATTTTTTTAAAAAAAAATTTTATGACCAATTTCATCATTTTTTAAAACTATATTAATATTGAACAAAAAAACATAAGATCAGTTCTCGATCGAGATTTCTTGGTCAGACGAGAGGGATTTTTTGGTCGAAAATTGACCAAAAAATTTTTCAAAAATGTCGAAGACAATTTTTTTTTTTTTACAAATTCCACATTTTTTTAAAAAAATTATATTGATGTTGGATATATAAGAAGGAACGAAGTCAGAAAGAAAATAATAATAAGAAATAAAGAAAAAATTTTAACATTAAATATTAAAATTAATTTTTTTTAAAAAAAGAAAAAAGCAGTAAACTGCCTTTTGTCCCGGCCAGGAACGTGACCGGGACAAAAGGTAGCAAGCTGCCACGATTTTTTTTTTTTTTTTTGCCTTCCTTCCTTTCTTCCTCTTCCTTCCTTCGCTTTTCCTTATTCCTTTTTCTTCTGGTTTACTATCTTTTGTAACTTTTTATAGAAATCAATACTCTTATATCTTAGAGCACTTTTGATGGATGGAAAAGCTTCAATTAATAATTGGCAACCGCCGCAAGAAGACGAAACGGAAGAAGCCACCGGAAGTGTGGTTCGAAATGCAAGTAGTCGTCGGATGCGCAATGAAACCCACGGAGGTGTCGTTCGAATGTTAATAAGGAGAAGAAGGAGAAGGGTTGAGGTTTTTAGGAGAGAAGAAGAAGAATGGATGGGAGGGTTTAGAAGAGAAGAAGGAGAACGGAGGGAATGGGTTTTACTTTTATCGAAGAAGAAAAACAAATGACGGGTTGTTTTTTGACCTTTTAGATTCAAGGGCATTGCTGTAAATTTACATTCATGGGTTTTATTAGCTAGGTTAAAAAAACAAGTTTTTTATTAGTTTCAAAAAAAAAAAAGTTTTTTACAAAGAAGTTATTTTTGACAACCCTAAAACTTAAATGGGTTATTTCTACAATTTCCCATAAAGTGAGTTGAATACATGAGAGAAATGATGGAAATATTCTTATGATATTCTCAGCTCCTAGATCTATTCTAGGTTTTATGATTTATCTCTTTGGTAACTTCATTCTTACTAGCCGTGCATGCTTATACAAACTACCCCTACCGCAGGCCGCATGCCACCATCGCCTCTGCTTCCCAATACATCTTTGAATTCTTTTCCTTTGCACACTTCTACTTTCCTCGGAAACTATCAATGAAATCAAACAAAGTCCAATTGGATTACAATCCTAGGTAATTATCGATTTATTGTACTCTGATTTTGTTATATATGGATTTTTTTTTTTAAATTGCCATGTTTACAATATTTGATCTAAATCGTTTGCAGCTGCATCTTGTAAGAGAACCTTTTGTAGCTCTGAAATTACCATATCAATGGCTCTCTTTCGAATCTCTTGCTCCCGATCATCATTATTTCATCTCAGGATCTCCACCTTATCTACCTTGCAGCTAAGTACAATCTCTTCTGCTGATCTATTCTACAACCATCTGCAGAAAAACAATGGTAATGTGGAGAAAACCCTTGCTACTGTGAAGACCAAGTTGGATTCTAGGTTTGTCAACGAAGTATTGCATAAATGTTCCTTCGAACTATCGCGAATGGGTCTTAGATTTTTTATATGGGCTGGTCGACAGCCTAATTATAGGCATAGTTCTTTTATGTACAGTAGAGCTTGTGAATTGATTGGAATTAATCGAAGCCCATGCTTGCTTGTTAATGTTATTGAGGATTATAGAAGGGAGGGTTGCCTTGTTGATATTAGGATGTTTAAGGTTATTTTAAATTTGTGTAAAGAAGCCAAGCTTGCCAAAGAGGCTTTGTCGATATTAGGGAAAGTGCCTGAATTTCGTTTGCAGGCTGACACTACAATGTATAATCTGATTATAAGGTTATTTACTGAGAAGGGTGAGATGGATAAGGCGATGGAGTTGATGAAAGAGATGGTTTCAGTTGATATTCATCCTAATATGATCACTTATATTGCCATGCTCAAAGGATTCTGTGATGTGGGTCGTTTGGATGATGCTTATGGGTTATTTAAGGCTATGAAGGAAAATGGATGTGCACCCAATGCAGTGGCTTACTCAGTGCTACTCAATGGTGCCAGTCGGCATGGGATTATGGAAAAGCTAATGGAATTGTTGGAGGAAATGGAAAAAGAAGGGGGAAATTGCAGTCCAAATACTGTCACATATACTTCCATAATCCAGAGTCTATGCGAATTAGGCCAGCCTCTGGAGGCATTGAAGATATTGGACAGAATGGAAGACTTGGGTTGTGCTCCAAATCGTGTTACAGTGAGCACTTTAATGAAGGAATTTTGTAAAGATGGTCACATGGAGGAGGCTTATAAGTTGATTGATAGAATTGTTGCAAGAGGTGGCGCTTCATATGGTGATTGTTATAGCTCACTTGTGGTATCTTTGGTTAAGATGAAAAAGATTGCAGAGGCAGAGGAACTATTTAGAAACATGTTAGCCAATGGGGTGAAGCCTGATGGTGTGGCTTGTAGTGTCATGATCAAGGAATTGTGCTTGGAGGGGAGGGTGGTAGATGGTTTTAACTTATGCAACGAAGTTGATAGGAATGGCTATTTAACTTCCATTGATTCTGCCATTTATTCTCTCCTTTTAGTTGGACTTTGTGAGCATGACCACTTTGTGGATGCTGCAAAACTTGCAAGGTTGATGCTTAAAAAGGGGATTCATTTAGAACCTCGTTATGCTGATAGTATCATTAAACATCTAAAGAAATTTGAAGACCAAGAGTTAGTTATGCATTTGGGTGGATTAAGGAAATGACAAGCAAAACCAACCAAGAACTAAATATGGGAATGGAGGTGTTAATTTGCAACATGGTTTTAAACTAAGGCTTTTTAGCAAGCTTCAGTTGATTAGAAACAACGGACACGTAGATTCAGTCATAGTAGATATGGATGTCAGATCAGTAGCAATTGCAGGTTATAAATATGATGATGTACAACACAAGAGATTGAATCTCTGACCTTGCTTATGGGAGAAAAGAGGATTTTGATGACCTTGTGACCTTAAATGTTTCACTTTTCCAATGACTGCAAAGGTGTGTTAAAAGTCCTTTCGAGCCACAAAACATACCTTACGAGTTGGAGGTTATGAGTTCTGTTTCAATAGCCGGTTGAAGTACAACATACTAGTTTCTCAAATTTCAATATTGTTGAATCAAGTGAAGATGCTTTTAATAGTCAACTGAAGTACATCTTGATCTTACAAGTGCCAAGCAATGCTGACCCCGTATTCAGAAGCTTGCTGATCCAAATCCTACTGCAGATCGTGAATTGTCGTGTCAGAAGTTCTGGATGTCTTAATTGGTAAGCTGGTTTACATTTTAATTGTTGAGAAAAGATGCTTTTAAAATTAGTATACATAGGCCTTTGACACACATTTGTGGTTCTTGTGTTGGCTGAACAGAGAATCGTCCAATTGTCAATTCTAGAGCGACATTGGTGATTTTTTTGGTAAAAAATATTGTTGAATCAAGTGATATTTTTGTAAAATAAATTGACACACCTTAATGTTAAGAACATGGAGTCCAAAACAAAGAATGGCGGCAGTGTGTGAAAAGGAAGAAAATTGAGGCAGCCTTAATCAAGAAGAAACAGAATTCTGGCGGACCTTTGATTGGCTGAGAAGAAAAACCAAGGCGATGGAAGTGTCTATAAATTGGAGGGAGCTTTCTTCATTTTTCATCCAACAGAGAAGGGTGGCTTAGTCTTGTGGCTGGAATTTTTCAGCATATTTGAGCGCGGCAGTGAGTTTTTCCTTCAGAAAAAGGAGTATTTTTTTTCTGGTTGGGTTGAGGGTATTTCTTTGTTGTTTATCCCAAGTTACCGGATTGTGGTTCTTGGAAGTCAATAGCTATTGTTGGGCTATTGAGGGGTTGTTTGTAGTGCGTTATTTTGAAGGCTTCCTGTAATC

mRNA sequence

CCTCCTTGTTCGGCAGCCATTCAGTCCCTCCAACGTCCGGCGAGCGTCCCCTGCAGTGGGTGGTGCTCTCCGTCTCGATTCCTCTCCGTCCATCGTCTTCTCCGGCAACGTGGGTGGTGCTACCGTGCGGCGTTCGTCCTTTCGGCCACAGCAGGCGTGTTTCCGGCCCCTCTCACTCACCTTCTGAAATTCGACATCCGTCTAGGTCTAACCCTTTTCTCAAGAAAAAGTTTGTTAAATTTAAAAGCGTTCTTAAAGGAGTTGATGATGGAGAAAAACAAAAGAAATTGGAGGAGATTAAACGTTGGAAGAAGGCCATGAAAGAGATTAGCACTTGAACTGGAGTTGTCATCACCAAAACCAGATAAATTTCTAACACCACCATTCTTTCAAATTTAACTTCTTTCCTTATCTCTTTGGATTGGTTTCAAACATCTGAATTGGAGAAATAAAAATAATCAAAGTCTTGATAACAAACTCCATTAAGCATTTTCATGTGTGAGTAATATTTATTTGTGCGGGTGAAAAAAGCAAATCTCAATGTTTTAAGTTTGATTTTTTCTCCATGGCTTTTTAAAATTTCATAATCGGATCCTAATTATTAGGCTATTTAGTTTTCAACGCTTTACTTTTCTTCTCTAAGGATTAAGCTTGGTGTCTATTTAATTTGGTCTTCGAGGTTCAAAAACTTACATTTTAGACATGTGTTTATGATAACTATTTTGTTTTTAAGTTTTAGTTTTTGATAATCAATTACCCATTGAAGTTAGCTTTCTTTTTCAAGGTACCCACCACGTTTGAAAGTCCAATTGTCGTTTGGAGCGGATTTGGAAGCTTGGACAGCAAGCTTGTTGGCTGATTTAGTTGGTTAGGAGCTTGGAAGCTAAAGAGTGTATTCGTTTTGCCAAACAACTTAATAGCTAAACTTGGATGCACGAATCGTTTCGACAAGGGTCCCCTTTTTTGTATGGAAATGTGAAGAATGGAGGTTTCACCATCTTTGAACGTCAACCGCAGCATTTCGGACTTAAAGTTGGCTTTTGACGACTACCCACTATCCAAACCATCCCGAATTGGATTACTCATTGCTCTTGGAGTCCATAATTTCGATTTCAAACTACAACAAAAATCAACCAGCAAGAATTGGAGAATCTTGGTATGGTTTGGCCGCATGCCACCATCGCCTCTGCTTCCCAATACATCTTTGAATTCTTTTCCTTTGCACACTTCTACTTTCCTCGGAAACTATCAATGAAATCAAACAAAGTCCAATTGGATTACAATCCTAGGTAATTATCGATTTATTGTACTCTGATTTTGTTATATATGGATTTTTTTTTTTAAATTGCCATGTTTACAATATTTGATCTAAATCGTTTGCAGCTGCATCTTGTAAGAGAACCTTTTGTAGCTCTGAAATTACCATATCAATGGCTCTCTTTCGAATCTCTTGCTCCCGATCATCATTATTTCATCTCAGGATCTCCACCTTATCTACCTTGCAGCTAAGTACAATCTCTTCTGCTGATCTATTCTACAACCATCTGCAGAAAAACAATGGTAATGTGGAGAAAACCCTTGCTACTGTGAAGACCAAGTTGGATTCTAGGTTTGTCAACGAAGTATTGCATAAATGTTCCTTCGAACTATCGCGAATGGGTCTTAGATTTTTTATATGGGCTGGTCGACAGCCTAATTATAGGCATAGTTCTTTTATGTACAGTAGAGCTTGTGAATTGATTGGAATTAATCGAAGCCCATGCTTGCTTGTTAATGTTATTGAGGATTATAGAAGGGAGGGTTGCCTTGTTGATATTAGGATGTTTAAGGTTATTTTAAATTTGTGTAAAGAAGCCAAGCTTGCCAAAGAGGCTTTGTCGATATTAGGGAAAGTGCCTGAATTTCGTTTGCAGGCTGACACTACAATGTATAATCTGATTATAAGGTTATTTACTGAGAAGGGTGAGATGGATAAGGCGATGGAGTTGATGAAAGAGATGGTTTCAGTTGATATTCATCCTAATATGATCACTTATATTGCCATGCTCAAAGGATTCTGTGATGTGGGTCGTTTGGATGATGCTTATGGGTTATTTAAGGCTATGAAGGAAAATGGATGTGCACCCAATGCAGTGGCTTACTCAGTGCTACTCAATGGTGCCAGTCGGCATGGGATTATGGAAAAGCTAATGGAATTGTTGGAGGAAATGGAAAAAGAAGGGGGAAATTGCAGTCCAAATACTGTCACATATACTTCCATAATCCAGAGTCTATGCGAATTAGGCCAGCCTCTGGAGGCATTGAAGATATTGGACAGAATGGAAGACTTGGGTTGTGCTCCAAATCGTGTTACAGTGAGCACTTTAATGAAGGAATTTTGTAAAGATGGTCACATGGAGGAGGCTTATAAGTTGATTGATAGAATTGTTGCAAGAGGTGGCGCTTCATATGGTGATTGTTATAGCTCACTTGTGGTATCTTTGGTTAAGATGAAAAAGATTGCAGAGGCAGAGGAACTATTTAGAAACATGTTAGCCAATGGGGTGAAGCCTGATGGTGTGGCTTGTAGTGTCATGATCAAGGAATTGTGCTTGGAGGGGAGGGTGGTAGATGGTTTTAACTTATGCAACGAAGTTGATAGGAATGGCTATTTAACTTCCATTGATTCTGCCATTTATTCTCTCCTTTTAGTTGGACTTTGTGAGCATGACCACTTTGTGGATGCTGCAAAACTTGCAAGGTTGATGCTTAAAAAGGGGATTCATTTAGAACCTCGTTATGCTGATAGTATCATTAAACATCTAAAGAAATTTGAAGACCAAGAGTTAGTTATGCATTTGGGTGGATTAAGGAAATGACAAGCAAAACCAACCAAGAACTAAATATGGGAATGGAGGTGTTAATTTGCAACATGGTTTTAAACTAAGGCTTTTTAGCAAGCTTCAGTTGATTAGAAACAACGGACACGTAGATTCAGTCATAGTAGATATGGATGTCAGATCAGTAGCAATTGCAGGTTATAAATATGATGATGTACAACACAAGAGATTGAATCTCTGACCTTGCTTATGGGAGAAAAGAGGATTTTGATGACCTTGTGACCTTAAATGTTTCACTTTTCCAATGACTGCAAAGGTGTGTTAAAAGTCCTTTCGAGCCACAAAACATACCTTACGAGTTGGAGGTTATGAGTTCTGTTTCAATAGCCGGTTGAAGTACAACATACTAGTTTCTCAAATTTCAATATTGTTGAATCAAGTGAAGATGCTTTTAATAGTCAACTGAAGTACATCTTGATCTTACAAGTGCCAAGCAATGCTGACCCCGTATTCAGAAGCTTGCTGATCCAAATCCTACTGCAGATCGTGAATTGTCGTGTCAGAAGTTCTGGATGTCTTAATTGAGAATCGTCCAATTGTCAATTCTAGAGCGACATTGGTGATTTTTTTGGTAAAAAATATTGTTGAATCAAGTGATATTTTTGTAAAATAAATTGACACACCTTAATGTTAAGAACATGGAGTCCAAAACAAAGAATGGCGGCAGTGTGTGAAAAGGAAGAAAATTGAGGCAGCCTTAATCAAGAAGAAACAGAATTCTGGCGGACCTTTGATTGGCTGAGAAGAAAAACCAAGGCGATGGAAGTGTCTATAAATTGGAGGGAGCTTTCTTCATTTTTCATCCAACAGAGAAGGGTGGCTTAGTCTTGTGGCTGGAATTTTTCAGCATATTTGAGCGCGGCAGTGAGTTTTTCCTTCAGAAAAAGGAGTATTTTTTTTCTGGTTGGGTTGAGGGTATTTCTTTGTTGTTTATCCCAAGTTACCGGATTGTGGTTCTTGGAAGTCAATAGCTATTGTTGGGCTATTGAGGGGTTGTTTGTAGTGCGTTATTTTGAAGGCTTCCTGTAATC

Coding sequence (CDS)

ATGGCTCTCTTTCGAATCTCTTGCTCCCGATCATCATTATTTCATCTCAGGATCTCCACCTTATCTACCTTGCAGCTAAGTACAATCTCTTCTGCTGATCTATTCTACAACCATCTGCAGAAAAACAATGGTAATGTGGAGAAAACCCTTGCTACTGTGAAGACCAAGTTGGATTCTAGGTTTGTCAACGAAGTATTGCATAAATGTTCCTTCGAACTATCGCGAATGGGTCTTAGATTTTTTATATGGGCTGGTCGACAGCCTAATTATAGGCATAGTTCTTTTATGTACAGTAGAGCTTGTGAATTGATTGGAATTAATCGAAGCCCATGCTTGCTTGTTAATGTTATTGAGGATTATAGAAGGGAGGGTTGCCTTGTTGATATTAGGATGTTTAAGGTTATTTTAAATTTGTGTAAAGAAGCCAAGCTTGCCAAAGAGGCTTTGTCGATATTAGGGAAAGTGCCTGAATTTCGTTTGCAGGCTGACACTACAATGTATAATCTGATTATAAGGTTATTTACTGAGAAGGGTGAGATGGATAAGGCGATGGAGTTGATGAAAGAGATGGTTTCAGTTGATATTCATCCTAATATGATCACTTATATTGCCATGCTCAAAGGATTCTGTGATGTGGGTCGTTTGGATGATGCTTATGGGTTATTTAAGGCTATGAAGGAAAATGGATGTGCACCCAATGCAGTGGCTTACTCAGTGCTACTCAATGGTGCCAGTCGGCATGGGATTATGGAAAAGCTAATGGAATTGTTGGAGGAAATGGAAAAAGAAGGGGGAAATTGCAGTCCAAATACTGTCACATATACTTCCATAATCCAGAGTCTATGCGAATTAGGCCAGCCTCTGGAGGCATTGAAGATATTGGACAGAATGGAAGACTTGGGTTGTGCTCCAAATCGTGTTACAGTGAGCACTTTAATGAAGGAATTTTGTAAAGATGGTCACATGGAGGAGGCTTATAAGTTGATTGATAGAATTGTTGCAAGAGGTGGCGCTTCATATGGTGATTGTTATAGCTCACTTGTGGTATCTTTGGTTAAGATGAAAAAGATTGCAGAGGCAGAGGAACTATTTAGAAACATGTTAGCCAATGGGGTGAAGCCTGATGGTGTGGCTTGTAGTGTCATGATCAAGGAATTGTGCTTGGAGGGGAGGGTGGTAGATGGTTTTAACTTATGCAACGAAGTTGATAGGAATGGCTATTTAACTTCCATTGATTCTGCCATTTATTCTCTCCTTTTAGTTGGACTTTGTGAGCATGACCACTTTGTGGATGCTGCAAAACTTGCAAGGTTGATGCTTAAAAAGGGGATTCATTTAGAACCTCGTTATGCTGATAGTATCATTAAACATCTAAAGAAATTTGAAGACCAAGAGTTAGTTATGCATTTGGGTGGATTAAGGAAATGA

Protein sequence

MALFRISCSRSSLFHLRISTLSTLQLSTISSADLFYNHLQKNNGNVEKTLATVKTKLDSRFVNEVLHKCSFELSRMGLRFFIWAGRQPNYRHSSFMYSRACELIGINRSPCLLVNVIEDYRREGCLVDIRMFKVILNLCKEAKLAKEALSILGKVPEFRLQADTTMYNLIIRLFTEKGEMDKAMELMKEMVSVDIHPNMITYIAMLKGFCDVGRLDDAYGLFKAMKENGCAPNAVAYSVLLNGASRHGIMEKLMELLEEMEKEGGNCSPNTVTYTSIIQSLCELGQPLEALKILDRMEDLGCAPNRVTVSTLMKEFCKDGHMEEAYKLIDRIVARGGASYGDCYSSLVVSLVKMKKIAEAEELFRNMLANGVKPDGVACSVMIKELCLEGRVVDGFNLCNEVDRNGYLTSIDSAIYSLLLVGLCEHDHFVDAAKLARLMLKKGIHLEPRYADSIIKHLKKFEDQELVMHLGGLRK
Homology
[Close]
BLAST of Lcy10g008430 vs. ExPASy Swiss-Prot
Match: Q9LVS3 (Pentatricopeptide repeat-containing protein At5g47360 OS=Arabidopsis thaliana OX=3702 GN=At5g47360 PE=2 SV=1)

HSP 1 Score: 407.9 bits (1047), Expect = 1.6e-112
Identity = 208/453 (45.92%), Postives = 309/453 (68.21%), Query Frame = 0 

Query: 19  STLSTLQ-LSTISSADLFYNHLQKNNGNVEKTLATVKTKLDSRFVNEVLHKCSFELSRMG 78
           S +S L+ L+T+S+A+  Y  LQ    N+EK LA+   +LDS  +NEVL +C     + G
Sbjct: 19  SKISALRFLTTVSAAERLYGQLQGCTSNLEKELASANVQLDSSCINEVLRRCDPNQFQSG 78

Query: 79  LRFFIWAGRQPNYRHSSFMYSRACELIGINRSPCLLVNVIEDYRREGCLVDIRMFKVILN 138
           LRFFIWAG   ++RHS++MY++AC+++ I   P L+  VIE YR+E C V+++  +++L 
Sbjct: 79  LRFFIWAGTLSSHRHSAYMYTKACDILKIRAKPDLIKYVIESYRKEECFVNVKTMRIVLT 138

Query: 139 LCKEAKLAKEALSILGKVPEFRLQADTTMYNLIIRLFTEKGEMDKAMELMKEMVSVDIHP 198
           LC +A LA EAL +L K PEF + ADT  YNL+IRLF +KG+++ A  L+KEM  V ++P
Sbjct: 139 LCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYP 198

Query: 199 NMITYIAMLKGFCDVGRLDDAYGLFKAMKENGCAPNAVAYSVLLNGASRHGIMEKLMELL 258
           ++ITY +M+ G+C+ G++DDA+ L K M ++ C  N+V YS +L G  + G ME+ +ELL
Sbjct: 199 DVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELL 258

Query: 259 EEMEKE--GGNCSPNTVTYTSIIQSLCELGQPLEALKILDRMEDLGCAPNRVTVSTLMKE 318
            EMEKE  GG  SPN VTYT +IQ+ CE  +  EAL +LDRM + GC PNRVT   L++ 
Sbjct: 259 AEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQG 318

Query: 319 FCK-DGHMEEAYKLIDRIVARGGASYGDCYSSLVVSLVKMKKIAEAEELFRNMLANGVKP 378
             + D  ++   KLID++V  GG S  +C+SS  VSL++MK+  EAE++FR ML  GV+P
Sbjct: 319 VLENDEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWEEAEKIFRLMLVRGVRP 378

Query: 379 DGVACSVMIKELCLEGRVVDGFNLCNEVDRNGYLTSIDSAIYSLLLVGLCEHDHFVDAAK 438
           DG+ACS + +ELCL  R +D F L  E+++    ++IDS I+++LL+GLC+  +  +AAK
Sbjct: 379 DGLACSHVFRELCLLERYLDCFLLYQEIEKKDVKSTIDSDIHAVLLLGLCQQGNSWEAAK 438

Query: 439 LARLMLKKGIHLEPRYADSIIKHLKKFEDQELV 468
           LA+ ML K + L+  + + II+ LKK  D++L+
Sbjct: 439 LAKSMLDKKMRLKVSHVEKIIEALKKTGDEDLM 471

[Close]
BLAST of Lcy10g008430 vs. ExPASy Swiss-Prot
Match: P0C8A0 (Pentatricopeptide repeat-containing protein At3g49730 OS=Arabidopsis thaliana OX=3702 GN=At3g49730 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.8e-44
Identity = 117/438 (26.71%), Postives = 224/438 (51.14%), Query Frame = 0 

Query: 36  YNHLQKNNGNVEK-TLATVKTKLDSR--FVNEVLHKCSFELSRMGLRFFIWAGRQPNYRH 95
           Y  L+ ++  V K  LA  ++ +D R   +  VL +C  +   +G RFF+WA +QP Y H
Sbjct: 71  YRILRNHHSRVPKLELALNESGIDLRPGLIIRVLSRCG-DAGNLGYRFFLWATKQPGYFH 130

Query: 96  SSFMYSRACELIGINRSPCLLVNVIEDYRREGC-LVDIRMFKVILNLCKEAKLAKEALSI 155
           S  +      ++   R    +  +IE+ R+    L++  +F V++     A + K+A+ +
Sbjct: 131 SYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFVVLMRRFASANMVKKAVEV 190

Query: 156 LGKVPEFRLQADTTMYNLIIRLFTEKGEMDKAMELMKEMVSVDIHPNMITYIAMLKGFCD 215
           L ++P++ L+ D  ++  ++    + G + +A ++ ++M      PN+  + ++L G+C 
Sbjct: 191 LDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDM-REKFPPNLRYFTSLLYGWCR 250

Query: 216 VGRLDDAYGLFKAMKENGCAPNAVAYSVLLNGASRHGIMEKLMELLEEMEKEGGNCSPNT 275
            G+L +A  +   MKE G  P+ V ++ LL+G +  G M    +L+ +M K G    PN 
Sbjct: 251 EGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRG--FEPNV 310

Query: 276 VTYTSIIQSLCELGQPL-EALKILDRMEDLGCAPNRVTVSTLMKEFCKDGHMEEAYKLID 335
             YT +IQ+LC   + + EA+++   ME  GC  + VT + L+  FCK G +++ Y ++D
Sbjct: 311 NCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLD 370

Query: 336 RIVARGGASYGDCYSSLVVSLVKMKKIAEAEELFRNMLANGVKPDGVACSVMIKELCLEG 395
            +  +G       Y  ++V+  K ++  E  EL   M   G  PD +  +V+I+  C  G
Sbjct: 371 DMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLG 430

Query: 396 RVVDGFNLCNEVDRNGYLTSIDSAIYSLLLVGLCEHDHFVDAAKLARLMLKKGIHLEPRY 455
            V +   L NE++ NG    +D+  + +++ G       ++A    + M+ +GI   P+Y
Sbjct: 431 EVKEAVRLWNEMEANGLSPGVDT--FVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQY 490

Query: 456 A--DSIIKHLKKFEDQEL 467
               S++ +L + +  E+
Sbjct: 491 GTLKSLLNNLVRDDKLEM 502

[Close]
BLAST of Lcy10g008430 vs. ExPASy Swiss-Prot
Match: O49436 (Pentatricopeptide repeat-containing protein At4g20090 OS=Arabidopsis thaliana OX=3702 GN=EMB1025 PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 2.5e-41
Identity = 114/337 (33.83%), Postives = 175/337 (51.93%), Query Frame = 0 

Query: 114 VNVIEDYRREGCLVDIRMFKVILN-LCKEAKLAK-----EALSILGKVPEFRLQADTTMY 173
           V ++++ + EGC     ++ V+++ LCK+  L +     + + + G VP      +   Y
Sbjct: 242 VLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVP------NEVTY 301

Query: 174 NLIIRLFTEKGEMDKAMELMKEMVSVDIHPNMITYIAMLKGFCDVGRLDDAYGLFKAMKE 233
           N +I     KG++DKA+ L++ MVS    PN +TY  ++ G     R  DA  L  +M+E
Sbjct: 302 NTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEE 361

Query: 234 NGCAPNAVAYSVLLNGASRHGIMEKLMELLEEMEKEGGNCSPNTVTYTSIIQSLCELGQP 293
            G   N   YSVL++G  + G  E+ M L  +M ++G  C PN V Y+ ++  LC  G+P
Sbjct: 362 RGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKG--CKPNIVVYSVLVDGLCREGKP 421

Query: 294 LEALKILDRMEDLGCAPNRVTVSTLMKEFCKDGHMEEAYKLIDRIVARGGASYGDCYSSL 353
            EA +IL+RM   GC PN  T S+LMK F K G  EEA ++   +   G +    CYS L
Sbjct: 422 NEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVL 481

Query: 354 VVSLVKMKKIAEAEELFRNMLANGVKPDGVACSVMIKELCLEGRVVDGFNLCNE-VDRNG 413
           +  L  + ++ EA  ++  ML  G+KPD VA S +IK LC  G +     L +E + +  
Sbjct: 482 IDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEE 541

Query: 414 YLTSIDSAIYSLLLVGLCEHDHFVDAAKLARLMLKKG 444
             +  D   Y++LL GLC       A  L   ML +G
Sbjct: 542 PKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRG 570

[Close]
BLAST of Lcy10g008430 vs. ExPASy Swiss-Prot
Match: O04491 (Putative pentatricopeptide repeat-containing protein At1g09680 OS=Arabidopsis thaliana OX=3702 GN=At1g09680 PE=3 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 1.3e-39
Identity = 92/322 (28.57%), Postives = 170/322 (52.80%), Query Frame = 0 

Query: 124 GCLVDIRMFKVILN-LCKEAKLAKEALSILGKVPEFRLQADTTMYNLIIRLFTEKGEMDK 183
           G  +++ +F +++N  CKE  ++ +A  +  ++ +  LQ     +N +I  + + G +D+
Sbjct: 235 GFPLNVYVFNILMNKFCKEGNIS-DAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDE 294

Query: 184 AMELMKEMVSVDIHPNMITYIAMLKGFCDVGRLDDAYGLFKAMKENGCAPNAVAYSVLLN 243
              L  +M      P++ TY A++   C   ++D A+GLF  M + G  PN V ++ L++
Sbjct: 295 GFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIH 354

Query: 244 GASRHGIMEKLMELLEEMEKEGGNCSPNTVTYTSIIQSLCELGQPLEALKILDRMEDLGC 303
           G SR+G ++ + E  ++M  +G    P+ V Y +++   C+ G  + A  I+D M   G 
Sbjct: 355 GHSRNGEIDLMKESYQKMLSKG--LQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGL 414

Query: 304 APNRVTVSTLMKEFCKDGHMEEAYKLIDRIVARGGASYGDCYSSLVVSLVKMKKIAEAEE 363
            P+++T +TL+  FC+ G +E A ++   +   G       +S+LV  + K  ++ +AE 
Sbjct: 415 RPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAER 474

Query: 364 LFRNMLANGVKPDGVACSVMIKELCLEGRVVDGFNLCNEVDRNGYLTSIDSAIYSLLLVG 423
             R ML  G+KPD V  ++M+   C +G    GF L  E+  +G++ S+    Y++LL G
Sbjct: 475 ALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSV--VTYNVLLNG 534

Query: 424 LCEHDHFVDAAKLARLMLKKGI 445
           LC+     +A  L   ML  G+
Sbjct: 535 LCKLGQMKNADMLLDAMLNIGV 551

[Close]
BLAST of Lcy10g008430 vs. ExPASy Swiss-Prot
Match: Q9LFF1 (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MEE40 PE=2 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 3.9e-39
Identity = 101/347 (29.11%), Postives = 173/347 (49.86%), Query Frame = 0 

Query: 114 VNVIEDY-RREGCLVDIRMFKVILN-LCKEAKLAKEALSILGKVPEFRLQADTTMYNLII 173
           +N I++   ++G   D   F  ++N LCK A   K A+ I+  + +     D   YN +I
Sbjct: 279 LNFIQEMSNQDGFFPDQYTFNTLVNGLCK-AGHVKHAIEIMDVMLQEGYDPDVYTYNSVI 338

Query: 174 RLFTEKGEMDKAMELMKEMVSVDIHPNMITYIAMLKGFCDVGRLDDAYGLFKAMKENGCA 233
               + GE+ +A+E++ +M++ D  PN +TY  ++   C   ++++A  L + +   G  
Sbjct: 339 SGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGIL 398

Query: 234 PNAVAYSVLLNGASRHGIMEKLMELLEEMEKEGGNCSPNTVTYTSIIQSLCELGQPLEAL 293
           P+   ++ L+ G          MEL EEM  +G  C P+  TY  +I SLC  G+  EAL
Sbjct: 399 PDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKG--CEPDEFTYNMLIDSLCSKGKLDEAL 458

Query: 294 KILDRMEDLGCAPNRVTVSTLMKEFCKDGHMEEAYKLIDRIVARGGASYGDCYSSLVVSL 353
            +L +ME  GCA + +T +TL+  FCK     EA ++ D +   G +     Y++L+  L
Sbjct: 459 NMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGL 518

Query: 354 VKMKKIAEAEELFRNMLANGVKPDGVACSVMIKELCLEGRVVDGFNLCNEVDRNGYLTSI 413
            K +++ +A +L   M+  G KPD    + ++   C  G +    ++   +  NG     
Sbjct: 519 CKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNG--CEP 578

Query: 414 DSAIYSLLLVGLCEHDHFVDAAKLARLMLKKGIHLEPRYADSIIKHL 459
           D   Y  L+ GLC+      A+KL R +  KGI+L P   + +I+ L
Sbjct: 579 DIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGL 620

[Close]
BLAST of Lcy10g008430 vs. ExPASy TrEMBL
Match: A0A6J1EQI2 (pentatricopeptide repeat-containing protein At5g47360 OS=Cucurbita moschata OX=3662 GN=LOC111435690 PE=3 SV=1)

HSP 1 Score: 837.4 bits (2162), Expect = 2.9e-239
Identity = 413/475 (86.95%), Postives = 443/475 (93.26%), Query Frame = 0 

Query: 1   MALFRISCSRSSLFHLRISTLSTLQLSTISSADLFYNHLQKNNGNVEKTLATVKTKLDSR 60
           MALFRI   R S F  +ISTLSTLQLST+SSADLFY+HLQK NGNVEKTLATVKTKLDSR
Sbjct: 1   MALFRIFYPRPSSFRFKISTLSTLQLSTVSSADLFYDHLQKKNGNVEKTLATVKTKLDSR 60

Query: 61  FVNEVLHKCSFELSRMGLRFFIWAGRQPNYRHSSFMYSRACELIGINRSPCLLVNVIEDY 120
            VN+VLHKCS ELS+MGLRFFIWAGRQPNYRHSSFMY+RACELIG+NRSPCLL NVIEDY
Sbjct: 61  CVNQVLHKCSLELSQMGLRFFIWAGRQPNYRHSSFMYTRACELIGLNRSPCLLFNVIEDY 120

Query: 121 RREGCLVDIRMFKVILNLCKEAKLAKEALSILGKVPEFRLQADTTMYNLIIRLFTEKGEM 180
           RREGCLVDI MFKVILNLCKE KLAKEALSILGK+ EF L+ADTTMYNL+IRLFTEKGEM
Sbjct: 121 RREGCLVDIGMFKVILNLCKEGKLAKEALSILGKMAEFHLRADTTMYNLVIRLFTEKGEM 180

Query: 181 DKAMELMKEMVSVDIHPNMITYIAMLKGFCDVGRLDDAYGLFKAMKENGCAPNAVAYSVL 240
           DKAMEL+KEM SVDI PNMITYIAMLKGFCDVGRL+DAYGLFK MK+NGCAPN VAYSVL
Sbjct: 181 DKAMELLKEMDSVDIDPNMITYIAMLKGFCDVGRLEDAYGLFKVMKDNGCAPNTVAYSVL 240

Query: 241 LNGASRHGIMEKLMELLEEMEKEGGNCSPNTVTYTSIIQSLCELGQPLEALKILDRMEDL 300
           LNGASRHG +EKLMELLEEMEK+GG C PNTVTYTSIIQSLCE+GQPLEALKILDRMED 
Sbjct: 241 LNGASRHGDLEKLMELLEEMEKQGGTCGPNTVTYTSIIQSLCEVGQPLEALKILDRMEDF 300

Query: 301 GCAPNRVTVSTLMKEFCKDGHMEEAYKLIDRIVARGGASYGDCYSSLVVSLVKMKKIAEA 360
           GCAPNRVTVS L+KEFCKDGHMEEAYKLIDR+ ARGGASYGDCYSSLV+SL+KMK+IAEA
Sbjct: 301 GCAPNRVTVSVLVKEFCKDGHMEEAYKLIDRVAARGGASYGDCYSSLVISLIKMKRIAEA 360

Query: 361 EELFRNMLANGVKPDGVACSVMIKELCLEGRVVDGFNLCNEVDRNGYLTSIDSAIYSLLL 420
           EELFRNMLANGVKPDGVAC++MIKELCLE RVVDGFNLCNEVDRNGYL+SIDS IYSLLL
Sbjct: 361 EELFRNMLANGVKPDGVACTLMIKELCLEERVVDGFNLCNEVDRNGYLSSIDSDIYSLLL 420

Query: 421 VGLCEHDHFVDAAKLARLMLKKGIHLEPRYADSIIKHLKKFEDQELVMHLGGLRK 476
           VGLCEHDH VDAAKLARLML+KGI L+P YA+SIIKH+KKF DQ LVMHLGG+R+
Sbjct: 421 VGLCEHDHSVDAAKLARLMLQKGIRLKPHYAESIIKHVKKFGDQNLVMHLGGIRE 475

[Close]
BLAST of Lcy10g008430 vs. ExPASy TrEMBL
Match: A0A6J1I125 (pentatricopeptide repeat-containing protein At5g47360 OS=Cucurbita maxima OX=3661 GN=LOC111468919 PE=3 SV=1)

HSP 1 Score: 836.3 bits (2159), Expect = 6.5e-239
Identity = 412/475 (86.74%), Postives = 445/475 (93.68%), Query Frame = 0 

Query: 1   MALFRISCSRSSLFHLRISTLSTLQLSTISSADLFYNHLQKNNGNVEKTLATVKTKLDSR 60
           MALFRI   R S F  +ISTLSTLQLST+SSADLFY+HLQKNNGNVEKTLATV+TKLDSR
Sbjct: 1   MALFRIFYPRPSSFRFKISTLSTLQLSTVSSADLFYDHLQKNNGNVEKTLATVRTKLDSR 60

Query: 61  FVNEVLHKCSFELSRMGLRFFIWAGRQPNYRHSSFMYSRACELIGINRSPCLLVNVIEDY 120
            VN+VLHKCSFELS MGLRFFIWAGRQPNYRHSSFMY+RACELIG+NRSPCLL NVIEDY
Sbjct: 61  CVNQVLHKCSFELSPMGLRFFIWAGRQPNYRHSSFMYARACELIGLNRSPCLLFNVIEDY 120

Query: 121 RREGCLVDIRMFKVILNLCKEAKLAKEALSILGKVPEFRLQADTTMYNLIIRLFTEKGEM 180
           RREGCL+DI MFKVILNLCKE KLAKEALSILGK+ EF L+ADTTMYNL+IRLFTEKGEM
Sbjct: 121 RREGCLLDIGMFKVILNLCKEGKLAKEALSILGKMAEFHLRADTTMYNLVIRLFTEKGEM 180

Query: 181 DKAMELMKEMVSVDIHPNMITYIAMLKGFCDVGRLDDAYGLFKAMKENGCAPNAVAYSVL 240
           DKAMEL+KEM SVDI PNMITYIAMLKGFCDVGRL+DAYGLFK MKENGCAPN VAYSVL
Sbjct: 181 DKAMELLKEMDSVDIDPNMITYIAMLKGFCDVGRLEDAYGLFKVMKENGCAPNTVAYSVL 240

Query: 241 LNGASRHGIMEKLMELLEEMEKEGGNCSPNTVTYTSIIQSLCELGQPLEALKILDRMEDL 300
           LNGASRHG +EKLMELLEEMEK+GGNC PNTVTYTSIIQSLCE+GQPLEALKILDRMED 
Sbjct: 241 LNGASRHGDLEKLMELLEEMEKQGGNCGPNTVTYTSIIQSLCEVGQPLEALKILDRMEDS 300

Query: 301 GCAPNRVTVSTLMKEFCKDGHMEEAYKLIDRIVARGGASYGDCYSSLVVSLVKMKKIAEA 360
           GC+PNRVTVS L+KEFCKDGHMEEAYKLIDR+ ARGGASYGDCYSSLV+SL+KMK+IAEA
Sbjct: 301 GCSPNRVTVSALVKEFCKDGHMEEAYKLIDRVAARGGASYGDCYSSLVISLIKMKRIAEA 360

Query: 361 EELFRNMLANGVKPDGVACSVMIKELCLEGRVVDGFNLCNEVDRNGYLTSIDSAIYSLLL 420
           EELFRNMLANGVKPDGVAC++MIKELCLE RVVDGFNLCNEV+RNGYL+SIDS IYSLLL
Sbjct: 361 EELFRNMLANGVKPDGVACTLMIKELCLEERVVDGFNLCNEVNRNGYLSSIDSDIYSLLL 420

Query: 421 VGLCEHDHFVDAAKLARLMLKKGIHLEPRYADSIIKHLKKFEDQELVMHLGGLRK 476
           VGLCEHDH VDAAKLARLML+KGI L+P YA+SIIKH+KKF  Q+LVMHLGG+R+
Sbjct: 421 VGLCEHDHSVDAAKLARLMLQKGIRLKPHYAESIIKHVKKFGGQDLVMHLGGIRE 475

[Close]
BLAST of Lcy10g008430 vs. ExPASy TrEMBL
Match: A0A6J1DNK5 (pentatricopeptide repeat-containing protein At5g47360 OS=Momordica charantia OX=3673 GN=LOC111022875 PE=3 SV=1)

HSP 1 Score: 814.3 bits (2102), Expect = 2.7e-232
Identity = 403/475 (84.84%), Postives = 436/475 (91.79%), Query Frame = 0 

Query: 1   MALFRISCSRSSLFHLRISTLSTLQLSTISSADLFYNHLQKNNGNVEKTLATVKTKLDSR 60
           MALF I   RS  F L+IS LS L LST+SSADLFY+HLQKNNGNVEK LATVKT LDSR
Sbjct: 1   MALFGIFSFRSFSFGLKISKLSALHLSTVSSADLFYDHLQKNNGNVEKILATVKTTLDSR 60

Query: 61  FVNEVLHKCSFELSRMGLRFFIWAGRQPNYRHSSFMYSRACELIGINRSPCLLVNVIEDY 120
            VN+VLHKCSFELS MGLRFFIWAGRQPNYRHSSFMYSRACELIGI+RSPCLL+NVIEDY
Sbjct: 61  CVNQVLHKCSFELSLMGLRFFIWAGRQPNYRHSSFMYSRACELIGIDRSPCLLLNVIEDY 120

Query: 121 RREGCLVDIRMFKVILNLCKEAKLAKEALSILGKVPEFRLQADTTMYNLIIRLFTEKGEM 180
           RREGC+VDIRMFKV+LNLCKEAKLA EAL ILGK+PEF L+ADTT+YNL++RLF EKGEM
Sbjct: 121 RREGCVVDIRMFKVMLNLCKEAKLANEALLILGKMPEFHLRADTTIYNLVVRLFIEKGEM 180

Query: 181 DKAMELMKEMVSVDIHPNMITYIAMLKGFCDVGRLDDAYGLFKAMKENGCAPNAVAYSVL 240
           DKAM+LM+EM S+DIHPNMITYIAMLKGFCDVGRL+DAYGLFKAMKENGC+PN +AYS+L
Sbjct: 181 DKAMKLMEEMDSIDIHPNMITYIAMLKGFCDVGRLEDAYGLFKAMKENGCSPNTLAYSIL 240

Query: 241 LNGASRHGIMEKLMELLEEMEKEGGNCSPNTVTYTSIIQSLCELGQPLEALKILDRMEDL 300
           LNGASR GI EK+MELLEEMEKEGGNCSPNTVTYTSIIQSLCELGQPLEALKILDRME+ 
Sbjct: 241 LNGASRQGITEKIMELLEEMEKEGGNCSPNTVTYTSIIQSLCELGQPLEALKILDRMENS 300

Query: 301 GCAPNRVTVSTLMKEFCKDGHMEEAYKLIDRIVARGGASYGDCYSSLVVSLVKMKKIAEA 360
           GCAPNRVTV TL+KEFCKDGHMEE Y+LI R+VARGG SYGDCYSSLVVSL KMKKIA A
Sbjct: 301 GCAPNRVTVRTLIKEFCKDGHMEEVYELIHRVVARGGTSYGDCYSSLVVSLAKMKKIAAA 360

Query: 361 EELFRNMLANGVKPDGVACSVMIKELCLEGRVVDGFNLCNEVDRNGYLTSIDSAIYSLLL 420
           EELFRNMLA+GVKPDGVACSVMIKELCLE RV+DG+NLCNEVDRNGYL+SIDS IYSLLL
Sbjct: 361 EELFRNMLASGVKPDGVACSVMIKELCLEERVLDGYNLCNEVDRNGYLSSIDSDIYSLLL 420

Query: 421 VGLCEHDHFVDAAKLARLMLKKGIHLEPRYADSIIKHLKKFEDQELVMHLGGLRK 476
           VGLCEHDH +DA KLARLMLKKGI L+P YAD +IKHL KF DQELVM LGG+RK
Sbjct: 421 VGLCEHDHPMDAEKLARLMLKKGIRLKPHYADHVIKHLNKFGDQELVMQLGGIRK 475

[Close]
BLAST of Lcy10g008430 vs. ExPASy TrEMBL
Match: A0A0A0LI44 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G123590 PE=4 SV=1)

HSP 1 Score: 812.0 bits (2096), Expect = 1.3e-231
Identity = 402/475 (84.63%), Postives = 440/475 (92.63%), Query Frame = 0 

Query: 1   MALFRISCSRSSLFHLRISTLSTLQLSTISSADLFYNHLQKNNGNVEKTLATVKTKLDSR 60
           MALFRISC RSS F L ISTLST  L+T+SS+DLFY+HL+K+NGN++KTLAT+KTKLDSR
Sbjct: 1   MALFRISCPRSSSFLLNISTLSTFHLNTLSSSDLFYDHLEKSNGNLDKTLATLKTKLDSR 60

Query: 61  FVNEVLHKCSFELSRMGLRFFIWAGRQPNYRHSSFMYSRACELIGINRSPCLLVNVIEDY 120
            VNEVL+KCSFELS+MGLRFFIWAGRQPNYRHSSFMYSRACELIGIN SPCLL NVIEDY
Sbjct: 61  CVNEVLYKCSFELSQMGLRFFIWAGRQPNYRHSSFMYSRACELIGINVSPCLLFNVIEDY 120

Query: 121 RREGCLVDIRMFKVILNLCKEAKLAKEALSILGKVPEFRLQADTTMYNLIIRLFTEKGEM 180
           RREGCLVDIRMFK+ILNLCKEAKLAKEALSIL K+ EF L+ADTTMYNL+IRLFTEKGEM
Sbjct: 121 RREGCLVDIRMFKIILNLCKEAKLAKEALSILRKMSEFHLRADTTMYNLVIRLFTEKGEM 180

Query: 181 DKAMELMKEMVSVDIHPNMITYIAMLKGFCDVGRLDDAYGLFKAMKENGCAPNAVAYSVL 240
           DKAMELMKEM SVDIHPNMITYI+MLKGFCDVGR +DAYGLFK MKENGCAPN V YSVL
Sbjct: 181 DKAMELMKEMDSVDIHPNMITYISMLKGFCDVGRWEDAYGLFKDMKENGCAPNTVVYSVL 240

Query: 241 LNGASRHGIMEKLMELLEEMEKEGGNCSPNTVTYTSIIQSLCELGQPLEALKILDRMEDL 300
           +NGA R  IM++LME+L+EMEK+GG CSPNTVTYTSIIQSLCE G PLEALK+LDRME+ 
Sbjct: 241 VNGAIRLRIMDRLMEMLKEMEKQGGTCSPNTVTYTSIIQSLCEEGHPLEALKVLDRMEEY 300

Query: 301 GCAPNRVTVSTLMKEFCKDGHMEEAYKLIDRIVARGGASYGDCYSSLVVSLVKMKKIAEA 360
           G APNRV VS L+KEFCKDGH+EEAYKLIDR+VARGG SYGDCYSSLVV+LVKMKKIAEA
Sbjct: 301 GYAPNRVAVSFLVKEFCKDGHVEEAYKLIDRVVARGGVSYGDCYSSLVVTLVKMKKIAEA 360

Query: 361 EELFRNMLANGVKPDGVACSVMIKELCLEGRVVDGFNLCNEVDRNGYLTSIDSAIYSLLL 420
           E+LFRNMLANGVKPDGVACS+MI+ELCLE RV+DGFNLC EVDRNGYL SID+ IYSLLL
Sbjct: 361 EKLFRNMLANGVKPDGVACSLMIRELCLEERVLDGFNLCYEVDRNGYLCSIDADIYSLLL 420

Query: 421 VGLCEHDHFVDAAKLARLMLKKGIHLEPRYADSIIKHLKKFEDQELVMHLGGLRK 476
           VGLCEHDH VDAAKLARLMLKKGI L+P YA+SIIKHLKKFED+ELVMHLGG+RK
Sbjct: 421 VGLCEHDHSVDAAKLARLMLKKGIRLKPHYAESIIKHLKKFEDRELVMHLGGIRK 475

[Close]
BLAST of Lcy10g008430 vs. ExPASy TrEMBL
Match: A0A1S3B4L9 (pentatricopeptide repeat-containing protein At5g47360 OS=Cucumis melo OX=3656 GN=LOC103485755 PE=4 SV=1)

HSP 1 Score: 775.0 bits (2000), Expect = 1.8e-220
Identity = 389/475 (81.89%), Postives = 428/475 (90.11%), Query Frame = 0 

Query: 1   MALFRISCSRSSLFHLRISTLSTLQLSTISSADLFYNHLQKNNGNVEKTLATVKTKLDSR 60
           MALFRIS  RSS   L ISTLST  LST+SS+DLFY+HL+KNNGNVEKTLATVKTKLDSR
Sbjct: 1   MALFRISYPRSSSILLNISTLSTFHLSTLSSSDLFYDHLEKNNGNVEKTLATVKTKLDSR 60

Query: 61  FVNEVLHKCSFELSRMGLRFFIWAGRQPNYRHSSFMYSRACELIGINRSPCLLVNVIEDY 120
            VNEVL+KCS ELS+MGLRFFIWAGRQPNYRH+SFMYSRACELIGIN SPCLL NVIEDY
Sbjct: 61  CVNEVLYKCSSELSQMGLRFFIWAGRQPNYRHTSFMYSRACELIGINVSPCLLFNVIEDY 120

Query: 121 RREGCLVDIRMFKVILNLCKEAKLAKEALSILGKVPEFRLQADTTMYNLIIRLFTEKGEM 180
           RREGCLVDIR+F++ILNLCKEAKL KEALSIL K+ EF L+ADTT+YNL+IRL TEKGEM
Sbjct: 121 RREGCLVDIRIFQIILNLCKEAKLTKEALSILRKMSEFHLRADTTIYNLVIRLCTEKGEM 180

Query: 181 DKAMELMKEMVSVDIHPNMITYIAMLKGFCDVGRLDDAYGLFKAMKENGCAPNAVAYSVL 240
           DKAMELMKEM SVDIHPNMITYI+M+KGFCDVGR +DAYGLFKAMKENG APN V YSVL
Sbjct: 181 DKAMELMKEMDSVDIHPNMITYISMIKGFCDVGRWEDAYGLFKAMKENGYAPNTVVYSVL 240

Query: 241 LNGASRHGIMEKLMELLEEMEKEGGNCSPNTVTYTSIIQSLCELGQPLEALKILDRMEDL 300
           +NGA R  IM+KLME+LEEMEK+GG C PNTVTYTSIIQSLCE G  LEALK+LDRME+ 
Sbjct: 241 VNGAVRLRIMDKLMEMLEEMEKQGGTCRPNTVTYTSIIQSLCEQGFLLEALKVLDRMEEY 300

Query: 301 GCAPNRVTVSTLMKEFCKDGHMEEAYKLIDRIVARGGASYGDCYSSLVVSLVKMKKIAEA 360
           G APNRV V  L+KEFCKDGH+EEAYKLIDR+VARGGASYGDC SSLV+SLVKMKKI EA
Sbjct: 301 GHAPNRVAVGYLVKEFCKDGHVEEAYKLIDRVVARGGASYGDCCSSLVISLVKMKKIPEA 360

Query: 361 EELFRNMLANGVKPDGVACSVMIKELCLEGRVVDGFNLCNEVDRNGYLTSIDSAIYSLLL 420
           E+LFRNMLANGVKPDGVACS+MI+ELCLE RV+DGF+LC EVDRNGYL  ID+ +YSLLL
Sbjct: 361 EKLFRNMLANGVKPDGVACSLMIRELCLEERVLDGFSLCYEVDRNGYLCYIDADVYSLLL 420

Query: 421 VGLCEHDHFVDAAKLARLMLKKGIHLEPRYADSIIKHLKKFEDQELVMHLGGLRK 476
           VGL +HDH VDAA LARLMLKKGI L+P YA+SIIKHLKKFEDQEL+MHLGG+RK
Sbjct: 421 VGLYQHDHSVDAAILARLMLKKGIRLKPHYAESIIKHLKKFEDQELIMHLGGIRK 475

[Close]
BLAST of Lcy10g008430 vs. NCBI nr
Match: KAG6579716.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 841.3 bits (2172), Expect = 4.2e-240
Identity = 414/475 (87.16%), Postives = 445/475 (93.68%), Query Frame = 0 

Query: 1   MALFRISCSRSSLFHLRISTLSTLQLSTISSADLFYNHLQKNNGNVEKTLATVKTKLDSR 60
           MALFRI   R S F  +ISTLSTLQLST+SSADLFY+HLQKNNGNVEKTLATVKTKLDSR
Sbjct: 1   MALFRIFYPRPSSFRFKISTLSTLQLSTVSSADLFYDHLQKNNGNVEKTLATVKTKLDSR 60

Query: 61  FVNEVLHKCSFELSRMGLRFFIWAGRQPNYRHSSFMYSRACELIGINRSPCLLVNVIEDY 120
            VN+VLHKCSFELS+MGLRFFIWAGRQPNYRHSSFMY+RACELIG+NRSPCLL NVIEDY
Sbjct: 61  CVNQVLHKCSFELSQMGLRFFIWAGRQPNYRHSSFMYTRACELIGLNRSPCLLFNVIEDY 120

Query: 121 RREGCLVDIRMFKVILNLCKEAKLAKEALSILGKVPEFRLQADTTMYNLIIRLFTEKGEM 180
           RREGCLVDI MFKVILNLCKE KLAKEALSILGK+ EF L+ADTTMYNL+IRLFTEKG+M
Sbjct: 121 RREGCLVDIGMFKVILNLCKEGKLAKEALSILGKMAEFHLRADTTMYNLVIRLFTEKGDM 180

Query: 181 DKAMELMKEMVSVDIHPNMITYIAMLKGFCDVGRLDDAYGLFKAMKENGCAPNAVAYSVL 240
           DKAMEL+KEM SVDI PNMITYIAMLKGFCDVGRL+DAYGLFK MK+NGCAPN VAYSVL
Sbjct: 181 DKAMELLKEMDSVDIDPNMITYIAMLKGFCDVGRLEDAYGLFKVMKDNGCAPNTVAYSVL 240

Query: 241 LNGASRHGIMEKLMELLEEMEKEGGNCSPNTVTYTSIIQSLCELGQPLEALKILDRMEDL 300
           LNGASRHG +EKLMELLEEMEK+GG C PNTVTYTSIIQSLCE+GQPLEALKILDRMED 
Sbjct: 241 LNGASRHGDLEKLMELLEEMEKQGGTCGPNTVTYTSIIQSLCEVGQPLEALKILDRMEDF 300

Query: 301 GCAPNRVTVSTLMKEFCKDGHMEEAYKLIDRIVARGGASYGDCYSSLVVSLVKMKKIAEA 360
           GCAPNRVTVS L+KEFCKDGHMEEAYKLIDR+ ARGGASYGDCYSSLV+SL+KMK+IAEA
Sbjct: 301 GCAPNRVTVSVLVKEFCKDGHMEEAYKLIDRVAARGGASYGDCYSSLVISLIKMKRIAEA 360

Query: 361 EELFRNMLANGVKPDGVACSVMIKELCLEGRVVDGFNLCNEVDRNGYLTSIDSAIYSLLL 420
           EELFRNMLANGVKPDGVAC++MIKELCLE RVVDGFNLCNEVDRNGYL+SIDS IYSLLL
Sbjct: 361 EELFRNMLANGVKPDGVACTLMIKELCLEDRVVDGFNLCNEVDRNGYLSSIDSDIYSLLL 420

Query: 421 VGLCEHDHFVDAAKLARLMLKKGIHLEPRYADSIIKHLKKFEDQELVMHLGGLRK 476
           VGLCEHDH VDAAKLARLML+KGI L+P YA+SIIKH+KKF DQ LVMHLGG+R+
Sbjct: 421 VGLCEHDHSVDAAKLARLMLQKGIRLKPHYAESIIKHVKKFGDQNLVMHLGGIRE 475

[Close]
BLAST of Lcy10g008430 vs. NCBI nr
Match: KAG7017159.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 840.9 bits (2171), Expect = 5.5e-240
Identity = 414/475 (87.16%), Postives = 445/475 (93.68%), Query Frame = 0 

Query: 1   MALFRISCSRSSLFHLRISTLSTLQLSTISSADLFYNHLQKNNGNVEKTLATVKTKLDSR 60
           MALFRI   R S F  +ISTLSTLQLST+SSADLFY+HLQKNNGNVEKTLATVKTKLDSR
Sbjct: 1   MALFRIFYPRPSSFRFKISTLSTLQLSTVSSADLFYDHLQKNNGNVEKTLATVKTKLDSR 60

Query: 61  FVNEVLHKCSFELSRMGLRFFIWAGRQPNYRHSSFMYSRACELIGINRSPCLLVNVIEDY 120
            VN+VLHKCSFELS+MGLRFFIWAGRQPNYRHSSFMY+RACELIG+NRSPCLL NVIEDY
Sbjct: 61  CVNQVLHKCSFELSQMGLRFFIWAGRQPNYRHSSFMYTRACELIGLNRSPCLLFNVIEDY 120

Query: 121 RREGCLVDIRMFKVILNLCKEAKLAKEALSILGKVPEFRLQADTTMYNLIIRLFTEKGEM 180
           RREGCLVDI MFKVILNLCKE KLAKEALSILGK+ EF L+ADTTMYNL+IRLFTEKG+M
Sbjct: 121 RREGCLVDIGMFKVILNLCKEGKLAKEALSILGKMAEFHLRADTTMYNLVIRLFTEKGDM 180

Query: 181 DKAMELMKEMVSVDIHPNMITYIAMLKGFCDVGRLDDAYGLFKAMKENGCAPNAVAYSVL 240
           DKAMEL+KEM SVDI PNMITYIAMLKGFCDVGRL+DAYGLFK MK+NGCAPN VAYSVL
Sbjct: 181 DKAMELLKEMDSVDIDPNMITYIAMLKGFCDVGRLEDAYGLFKVMKDNGCAPNTVAYSVL 240

Query: 241 LNGASRHGIMEKLMELLEEMEKEGGNCSPNTVTYTSIIQSLCELGQPLEALKILDRMEDL 300
           LNGASRHG +EKLMELLEEMEK+GG C PNTVTYTSIIQSLCE+GQPLEALKILDRMED 
Sbjct: 241 LNGASRHGDLEKLMELLEEMEKQGGTCGPNTVTYTSIIQSLCEVGQPLEALKILDRMEDF 300

Query: 301 GCAPNRVTVSTLMKEFCKDGHMEEAYKLIDRIVARGGASYGDCYSSLVVSLVKMKKIAEA 360
           GCAPNRVTVS L+KEFCKDGHMEEAYKLIDR+ ARGGASYGDCYSSLV+SL+KMK+IAEA
Sbjct: 301 GCAPNRVTVSVLVKEFCKDGHMEEAYKLIDRVAARGGASYGDCYSSLVISLIKMKRIAEA 360

Query: 361 EELFRNMLANGVKPDGVACSVMIKELCLEGRVVDGFNLCNEVDRNGYLTSIDSAIYSLLL 420
           EELFRNMLANGVKPDGVAC++MIKELCLE RVVDGFNLCNEVDRNGYL+SIDS IYSLLL
Sbjct: 361 EELFRNMLANGVKPDGVACTLMIKELCLEERVVDGFNLCNEVDRNGYLSSIDSDIYSLLL 420

Query: 421 VGLCEHDHFVDAAKLARLMLKKGIHLEPRYADSIIKHLKKFEDQELVMHLGGLRK 476
           VGLCEHDH VDAAKLARLML+KGI L+P YA+SIIKH+KKF DQ LVMHLGG+R+
Sbjct: 421 VGLCEHDHSVDAAKLARLMLQKGIRLKPHYAESIIKHVKKFGDQNLVMHLGGIRE 475

[Close]
BLAST of Lcy10g008430 vs. NCBI nr
Match: XP_023551479.1 (pentatricopeptide repeat-containing protein At5g47360 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 839.0 bits (2166), Expect = 2.1e-239
Identity = 413/475 (86.95%), Postives = 444/475 (93.47%), Query Frame = 0 

Query: 1   MALFRISCSRSSLFHLRISTLSTLQLSTISSADLFYNHLQKNNGNVEKTLATVKTKLDSR 60
           MALFRI   R S F  +ISTLSTLQLST+SSADLFY+HLQKNNGNVEKTL TVKTKLDSR
Sbjct: 1   MALFRIFYPRPSSFRFKISTLSTLQLSTVSSADLFYDHLQKNNGNVEKTLTTVKTKLDSR 60

Query: 61  FVNEVLHKCSFELSRMGLRFFIWAGRQPNYRHSSFMYSRACELIGINRSPCLLVNVIEDY 120
            VNEVLHKCSFELS+MGLRFFIWAGRQPNYRHSSFMY+RACELIG+NRSPCL+ NVIEDY
Sbjct: 61  CVNEVLHKCSFELSQMGLRFFIWAGRQPNYRHSSFMYTRACELIGLNRSPCLVFNVIEDY 120

Query: 121 RREGCLVDIRMFKVILNLCKEAKLAKEALSILGKVPEFRLQADTTMYNLIIRLFTEKGEM 180
           RREGCLVDI MFKVILNLCKE KLAKEALSILG++ EF L+ADTTMYNL+IRLFTEKGEM
Sbjct: 121 RREGCLVDIGMFKVILNLCKEGKLAKEALSILGEMAEFHLRADTTMYNLVIRLFTEKGEM 180

Query: 181 DKAMELMKEMVSVDIHPNMITYIAMLKGFCDVGRLDDAYGLFKAMKENGCAPNAVAYSVL 240
           DKAMEL+KEM SVDI PNMITYIAMLKGFCDVGRL+DAYGLFK MK+NGCAPN VAYSVL
Sbjct: 181 DKAMELLKEMDSVDIDPNMITYIAMLKGFCDVGRLEDAYGLFKVMKDNGCAPNTVAYSVL 240

Query: 241 LNGASRHGIMEKLMELLEEMEKEGGNCSPNTVTYTSIIQSLCELGQPLEALKILDRMEDL 300
           LNGASRHG +EKLMELLEEMEK+GG C PNTVTYTSIIQSLCE+GQPLEALKILDRMED 
Sbjct: 241 LNGASRHGDLEKLMELLEEMEKQGGTCGPNTVTYTSIIQSLCEVGQPLEALKILDRMEDF 300

Query: 301 GCAPNRVTVSTLMKEFCKDGHMEEAYKLIDRIVARGGASYGDCYSSLVVSLVKMKKIAEA 360
           GCAPNRVTVS L+KEFCKDGHMEEAYKLIDR+ ARGGASYGDCYSSLV+SL+KMK+IAEA
Sbjct: 301 GCAPNRVTVSVLVKEFCKDGHMEEAYKLIDRVAARGGASYGDCYSSLVISLIKMKRIAEA 360

Query: 361 EELFRNMLANGVKPDGVACSVMIKELCLEGRVVDGFNLCNEVDRNGYLTSIDSAIYSLLL 420
           EELFRNMLANGVKPDGVAC++MIKELCLE RVVDGFNLCNEVDRNGYL+SIDS IYSLLL
Sbjct: 361 EELFRNMLANGVKPDGVACTLMIKELCLEERVVDGFNLCNEVDRNGYLSSIDSDIYSLLL 420

Query: 421 VGLCEHDHFVDAAKLARLMLKKGIHLEPRYADSIIKHLKKFEDQELVMHLGGLRK 476
           VGLCEHDH VDAAKLARLML+KGI L+P YA+SIIKH+KKF DQ LVMHLGG+R+
Sbjct: 421 VGLCEHDHSVDAAKLARLMLQKGIRLKPHYAESIIKHVKKFGDQNLVMHLGGIRE 475

[Close]
BLAST of Lcy10g008430 vs. NCBI nr
Match: XP_022928928.1 (pentatricopeptide repeat-containing protein At5g47360 [Cucurbita moschata])

HSP 1 Score: 837.4 bits (2162), Expect = 6.1e-239
Identity = 413/475 (86.95%), Postives = 443/475 (93.26%), Query Frame = 0 

Query: 1   MALFRISCSRSSLFHLRISTLSTLQLSTISSADLFYNHLQKNNGNVEKTLATVKTKLDSR 60
           MALFRI   R S F  +ISTLSTLQLST+SSADLFY+HLQK NGNVEKTLATVKTKLDSR
Sbjct: 1   MALFRIFYPRPSSFRFKISTLSTLQLSTVSSADLFYDHLQKKNGNVEKTLATVKTKLDSR 60

Query: 61  FVNEVLHKCSFELSRMGLRFFIWAGRQPNYRHSSFMYSRACELIGINRSPCLLVNVIEDY 120
            VN+VLHKCS ELS+MGLRFFIWAGRQPNYRHSSFMY+RACELIG+NRSPCLL NVIEDY
Sbjct: 61  CVNQVLHKCSLELSQMGLRFFIWAGRQPNYRHSSFMYTRACELIGLNRSPCLLFNVIEDY 120

Query: 121 RREGCLVDIRMFKVILNLCKEAKLAKEALSILGKVPEFRLQADTTMYNLIIRLFTEKGEM 180
           RREGCLVDI MFKVILNLCKE KLAKEALSILGK+ EF L+ADTTMYNL+IRLFTEKGEM
Sbjct: 121 RREGCLVDIGMFKVILNLCKEGKLAKEALSILGKMAEFHLRADTTMYNLVIRLFTEKGEM 180

Query: 181 DKAMELMKEMVSVDIHPNMITYIAMLKGFCDVGRLDDAYGLFKAMKENGCAPNAVAYSVL 240
           DKAMEL+KEM SVDI PNMITYIAMLKGFCDVGRL+DAYGLFK MK+NGCAPN VAYSVL
Sbjct: 181 DKAMELLKEMDSVDIDPNMITYIAMLKGFCDVGRLEDAYGLFKVMKDNGCAPNTVAYSVL 240

Query: 241 LNGASRHGIMEKLMELLEEMEKEGGNCSPNTVTYTSIIQSLCELGQPLEALKILDRMEDL 300
           LNGASRHG +EKLMELLEEMEK+GG C PNTVTYTSIIQSLCE+GQPLEALKILDRMED 
Sbjct: 241 LNGASRHGDLEKLMELLEEMEKQGGTCGPNTVTYTSIIQSLCEVGQPLEALKILDRMEDF 300

Query: 301 GCAPNRVTVSTLMKEFCKDGHMEEAYKLIDRIVARGGASYGDCYSSLVVSLVKMKKIAEA 360
           GCAPNRVTVS L+KEFCKDGHMEEAYKLIDR+ ARGGASYGDCYSSLV+SL+KMK+IAEA
Sbjct: 301 GCAPNRVTVSVLVKEFCKDGHMEEAYKLIDRVAARGGASYGDCYSSLVISLIKMKRIAEA 360

Query: 361 EELFRNMLANGVKPDGVACSVMIKELCLEGRVVDGFNLCNEVDRNGYLTSIDSAIYSLLL 420
           EELFRNMLANGVKPDGVAC++MIKELCLE RVVDGFNLCNEVDRNGYL+SIDS IYSLLL
Sbjct: 361 EELFRNMLANGVKPDGVACTLMIKELCLEERVVDGFNLCNEVDRNGYLSSIDSDIYSLLL 420

Query: 421 VGLCEHDHFVDAAKLARLMLKKGIHLEPRYADSIIKHLKKFEDQELVMHLGGLRK 476
           VGLCEHDH VDAAKLARLML+KGI L+P YA+SIIKH+KKF DQ LVMHLGG+R+
Sbjct: 421 VGLCEHDHSVDAAKLARLMLQKGIRLKPHYAESIIKHVKKFGDQNLVMHLGGIRE 475

[Close]
BLAST of Lcy10g008430 vs. NCBI nr
Match: XP_022969835.1 (pentatricopeptide repeat-containing protein At5g47360 [Cucurbita maxima])

HSP 1 Score: 836.3 bits (2159), Expect = 1.4e-238
Identity = 412/475 (86.74%), Postives = 445/475 (93.68%), Query Frame = 0 

Query: 1   MALFRISCSRSSLFHLRISTLSTLQLSTISSADLFYNHLQKNNGNVEKTLATVKTKLDSR 60
           MALFRI   R S F  +ISTLSTLQLST+SSADLFY+HLQKNNGNVEKTLATV+TKLDSR
Sbjct: 1   MALFRIFYPRPSSFRFKISTLSTLQLSTVSSADLFYDHLQKNNGNVEKTLATVRTKLDSR 60

Query: 61  FVNEVLHKCSFELSRMGLRFFIWAGRQPNYRHSSFMYSRACELIGINRSPCLLVNVIEDY 120
            VN+VLHKCSFELS MGLRFFIWAGRQPNYRHSSFMY+RACELIG+NRSPCLL NVIEDY
Sbjct: 61  CVNQVLHKCSFELSPMGLRFFIWAGRQPNYRHSSFMYARACELIGLNRSPCLLFNVIEDY 120

Query: 121 RREGCLVDIRMFKVILNLCKEAKLAKEALSILGKVPEFRLQADTTMYNLIIRLFTEKGEM 180
           RREGCL+DI MFKVILNLCKE KLAKEALSILGK+ EF L+ADTTMYNL+IRLFTEKGEM
Sbjct: 121 RREGCLLDIGMFKVILNLCKEGKLAKEALSILGKMAEFHLRADTTMYNLVIRLFTEKGEM 180

Query: 181 DKAMELMKEMVSVDIHPNMITYIAMLKGFCDVGRLDDAYGLFKAMKENGCAPNAVAYSVL 240
           DKAMEL+KEM SVDI PNMITYIAMLKGFCDVGRL+DAYGLFK MKENGCAPN VAYSVL
Sbjct: 181 DKAMELLKEMDSVDIDPNMITYIAMLKGFCDVGRLEDAYGLFKVMKENGCAPNTVAYSVL 240

Query: 241 LNGASRHGIMEKLMELLEEMEKEGGNCSPNTVTYTSIIQSLCELGQPLEALKILDRMEDL 300
           LNGASRHG +EKLMELLEEMEK+GGNC PNTVTYTSIIQSLCE+GQPLEALKILDRMED 
Sbjct: 241 LNGASRHGDLEKLMELLEEMEKQGGNCGPNTVTYTSIIQSLCEVGQPLEALKILDRMEDS 300

Query: 301 GCAPNRVTVSTLMKEFCKDGHMEEAYKLIDRIVARGGASYGDCYSSLVVSLVKMKKIAEA 360
           GC+PNRVTVS L+KEFCKDGHMEEAYKLIDR+ ARGGASYGDCYSSLV+SL+KMK+IAEA
Sbjct: 301 GCSPNRVTVSALVKEFCKDGHMEEAYKLIDRVAARGGASYGDCYSSLVISLIKMKRIAEA 360

Query: 361 EELFRNMLANGVKPDGVACSVMIKELCLEGRVVDGFNLCNEVDRNGYLTSIDSAIYSLLL 420
           EELFRNMLANGVKPDGVAC++MIKELCLE RVVDGFNLCNEV+RNGYL+SIDS IYSLLL
Sbjct: 361 EELFRNMLANGVKPDGVACTLMIKELCLEERVVDGFNLCNEVNRNGYLSSIDSDIYSLLL 420

Query: 421 VGLCEHDHFVDAAKLARLMLKKGIHLEPRYADSIIKHLKKFEDQELVMHLGGLRK 476
           VGLCEHDH VDAAKLARLML+KGI L+P YA+SIIKH+KKF  Q+LVMHLGG+R+
Sbjct: 421 VGLCEHDHSVDAAKLARLMLQKGIRLKPHYAESIIKHVKKFGGQDLVMHLGGIRE 475

[Close]
BLAST of Lcy10g008430 vs. TAIR 10
Match: AT5G47360.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 407.9 bits (1047), Expect = 1.1e-113
Identity = 208/453 (45.92%), Postives = 309/453 (68.21%), Query Frame = 0 

Query: 19  STLSTLQ-LSTISSADLFYNHLQKNNGNVEKTLATVKTKLDSRFVNEVLHKCSFELSRMG 78
           S +S L+ L+T+S+A+  Y  LQ    N+EK LA+   +LDS  +NEVL +C     + G
Sbjct: 19  SKISALRFLTTVSAAERLYGQLQGCTSNLEKELASANVQLDSSCINEVLRRCDPNQFQSG 78

Query: 79  LRFFIWAGRQPNYRHSSFMYSRACELIGINRSPCLLVNVIEDYRREGCLVDIRMFKVILN 138
           LRFFIWAG   ++RHS++MY++AC+++ I   P L+  VIE YR+E C V+++  +++L 
Sbjct: 79  LRFFIWAGTLSSHRHSAYMYTKACDILKIRAKPDLIKYVIESYRKEECFVNVKTMRIVLT 138

Query: 139 LCKEAKLAKEALSILGKVPEFRLQADTTMYNLIIRLFTEKGEMDKAMELMKEMVSVDIHP 198
           LC +A LA EAL +L K PEF + ADT  YNL+IRLF +KG+++ A  L+KEM  V ++P
Sbjct: 139 LCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYP 198

Query: 199 NMITYIAMLKGFCDVGRLDDAYGLFKAMKENGCAPNAVAYSVLLNGASRHGIMEKLMELL 258
           ++ITY +M+ G+C+ G++DDA+ L K M ++ C  N+V YS +L G  + G ME+ +ELL
Sbjct: 199 DVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELL 258

Query: 259 EEMEKE--GGNCSPNTVTYTSIIQSLCELGQPLEALKILDRMEDLGCAPNRVTVSTLMKE 318
            EMEKE  GG  SPN VTYT +IQ+ CE  +  EAL +LDRM + GC PNRVT   L++ 
Sbjct: 259 AEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQG 318

Query: 319 FCK-DGHMEEAYKLIDRIVARGGASYGDCYSSLVVSLVKMKKIAEAEELFRNMLANGVKP 378
             + D  ++   KLID++V  GG S  +C+SS  VSL++MK+  EAE++FR ML  GV+P
Sbjct: 319 VLENDEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWEEAEKIFRLMLVRGVRP 378

Query: 379 DGVACSVMIKELCLEGRVVDGFNLCNEVDRNGYLTSIDSAIYSLLLVGLCEHDHFVDAAK 438
           DG+ACS + +ELCL  R +D F L  E+++    ++IDS I+++LL+GLC+  +  +AAK
Sbjct: 379 DGLACSHVFRELCLLERYLDCFLLYQEIEKKDVKSTIDSDIHAVLLLGLCQQGNSWEAAK 438

Query: 439 LARLMLKKGIHLEPRYADSIIKHLKKFEDQELV 468
           LA+ ML K + L+  + + II+ LKK  D++L+
Sbjct: 439 LAKSMLDKKMRLKVSHVEKIIEALKKTGDEDLM 471

[Close]
BLAST of Lcy10g008430 vs. TAIR 10
Match: AT3G49730.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 181.8 bits (460), Expect = 1.3e-45
Identity = 117/438 (26.71%), Postives = 224/438 (51.14%), Query Frame = 0 

Query: 36  YNHLQKNNGNVEK-TLATVKTKLDSR--FVNEVLHKCSFELSRMGLRFFIWAGRQPNYRH 95
           Y  L+ ++  V K  LA  ++ +D R   +  VL +C  +   +G RFF+WA +QP Y H
Sbjct: 71  YRILRNHHSRVPKLELALNESGIDLRPGLIIRVLSRCG-DAGNLGYRFFLWATKQPGYFH 130

Query: 96  SSFMYSRACELIGINRSPCLLVNVIEDYRREGC-LVDIRMFKVILNLCKEAKLAKEALSI 155
           S  +      ++   R    +  +IE+ R+    L++  +F V++     A + K+A+ +
Sbjct: 131 SYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFVVLMRRFASANMVKKAVEV 190

Query: 156 LGKVPEFRLQADTTMYNLIIRLFTEKGEMDKAMELMKEMVSVDIHPNMITYIAMLKGFCD 215
           L ++P++ L+ D  ++  ++    + G + +A ++ ++M      PN+  + ++L G+C 
Sbjct: 191 LDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDM-REKFPPNLRYFTSLLYGWCR 250

Query: 216 VGRLDDAYGLFKAMKENGCAPNAVAYSVLLNGASRHGIMEKLMELLEEMEKEGGNCSPNT 275
            G+L +A  +   MKE G  P+ V ++ LL+G +  G M    +L+ +M K G    PN 
Sbjct: 251 EGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRG--FEPNV 310

Query: 276 VTYTSIIQSLCELGQPL-EALKILDRMEDLGCAPNRVTVSTLMKEFCKDGHMEEAYKLID 335
             YT +IQ+LC   + + EA+++   ME  GC  + VT + L+  FCK G +++ Y ++D
Sbjct: 311 NCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLD 370

Query: 336 RIVARGGASYGDCYSSLVVSLVKMKKIAEAEELFRNMLANGVKPDGVACSVMIKELCLEG 395
            +  +G       Y  ++V+  K ++  E  EL   M   G  PD +  +V+I+  C  G
Sbjct: 371 DMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLG 430

Query: 396 RVVDGFNLCNEVDRNGYLTSIDSAIYSLLLVGLCEHDHFVDAAKLARLMLKKGIHLEPRY 455
            V +   L NE++ NG    +D+  + +++ G       ++A    + M+ +GI   P+Y
Sbjct: 431 EVKEAVRLWNEMEANGLSPGVDT--FVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQY 490

Query: 456 A--DSIIKHLKKFEDQEL 467
               S++ +L + +  E+
Sbjct: 491 GTLKSLLNNLVRDDKLEM 502

[Close]
BLAST of Lcy10g008430 vs. TAIR 10
Match: AT4G20090.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 171.4 bits (433), Expect = 1.7e-42
Identity = 114/337 (33.83%), Postives = 175/337 (51.93%), Query Frame = 0 

Query: 114 VNVIEDYRREGCLVDIRMFKVILN-LCKEAKLAK-----EALSILGKVPEFRLQADTTMY 173
           V ++++ + EGC     ++ V+++ LCK+  L +     + + + G VP      +   Y
Sbjct: 242 VLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVP------NEVTY 301

Query: 174 NLIIRLFTEKGEMDKAMELMKEMVSVDIHPNMITYIAMLKGFCDVGRLDDAYGLFKAMKE 233
           N +I     KG++DKA+ L++ MVS    PN +TY  ++ G     R  DA  L  +M+E
Sbjct: 302 NTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEE 361

Query: 234 NGCAPNAVAYSVLLNGASRHGIMEKLMELLEEMEKEGGNCSPNTVTYTSIIQSLCELGQP 293
            G   N   YSVL++G  + G  E+ M L  +M ++G  C PN V Y+ ++  LC  G+P
Sbjct: 362 RGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKG--CKPNIVVYSVLVDGLCREGKP 421

Query: 294 LEALKILDRMEDLGCAPNRVTVSTLMKEFCKDGHMEEAYKLIDRIVARGGASYGDCYSSL 353
            EA +IL+RM   GC PN  T S+LMK F K G  EEA ++   +   G +    CYS L
Sbjct: 422 NEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVL 481

Query: 354 VVSLVKMKKIAEAEELFRNMLANGVKPDGVACSVMIKELCLEGRVVDGFNLCNE-VDRNG 413
           +  L  + ++ EA  ++  ML  G+KPD VA S +IK LC  G +     L +E + +  
Sbjct: 482 IDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEE 541

Query: 414 YLTSIDSAIYSLLLVGLCEHDHFVDAAKLARLMLKKG 444
             +  D   Y++LL GLC       A  L   ML +G
Sbjct: 542 PKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRG 570

[Close]
BLAST of Lcy10g008430 vs. TAIR 10
Match: AT1G09680.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 165.6 bits (418), Expect = 9.6e-41
Identity = 92/322 (28.57%), Postives = 170/322 (52.80%), Query Frame = 0 

Query: 124 GCLVDIRMFKVILN-LCKEAKLAKEALSILGKVPEFRLQADTTMYNLIIRLFTEKGEMDK 183
           G  +++ +F +++N  CKE  ++ +A  +  ++ +  LQ     +N +I  + + G +D+
Sbjct: 235 GFPLNVYVFNILMNKFCKEGNIS-DAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDE 294

Query: 184 AMELMKEMVSVDIHPNMITYIAMLKGFCDVGRLDDAYGLFKAMKENGCAPNAVAYSVLLN 243
              L  +M      P++ TY A++   C   ++D A+GLF  M + G  PN V ++ L++
Sbjct: 295 GFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIH 354

Query: 244 GASRHGIMEKLMELLEEMEKEGGNCSPNTVTYTSIIQSLCELGQPLEALKILDRMEDLGC 303
           G SR+G ++ + E  ++M  +G    P+ V Y +++   C+ G  + A  I+D M   G 
Sbjct: 355 GHSRNGEIDLMKESYQKMLSKG--LQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGL 414

Query: 304 APNRVTVSTLMKEFCKDGHMEEAYKLIDRIVARGGASYGDCYSSLVVSLVKMKKIAEAEE 363
            P+++T +TL+  FC+ G +E A ++   +   G       +S+LV  + K  ++ +AE 
Sbjct: 415 RPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAER 474

Query: 364 LFRNMLANGVKPDGVACSVMIKELCLEGRVVDGFNLCNEVDRNGYLTSIDSAIYSLLLVG 423
             R ML  G+KPD V  ++M+   C +G    GF L  E+  +G++ S+    Y++LL G
Sbjct: 475 ALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSV--VTYNVLLNG 534

Query: 424 LCEHDHFVDAAKLARLMLKKGI 445
           LC+     +A  L   ML  G+
Sbjct: 535 LCKLGQMKNADMLLDAMLNIGV 551

[Close]
BLAST of Lcy10g008430 vs. TAIR 10
Match: AT3G53700.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 164.1 bits (414), Expect = 2.8e-40
Identity = 101/347 (29.11%), Postives = 173/347 (49.86%), Query Frame = 0 

Query: 114 VNVIEDY-RREGCLVDIRMFKVILN-LCKEAKLAKEALSILGKVPEFRLQADTTMYNLII 173
           +N I++   ++G   D   F  ++N LCK A   K A+ I+  + +     D   YN +I
Sbjct: 279 LNFIQEMSNQDGFFPDQYTFNTLVNGLCK-AGHVKHAIEIMDVMLQEGYDPDVYTYNSVI 338

Query: 174 RLFTEKGEMDKAMELMKEMVSVDIHPNMITYIAMLKGFCDVGRLDDAYGLFKAMKENGCA 233
               + GE+ +A+E++ +M++ D  PN +TY  ++   C   ++++A  L + +   G  
Sbjct: 339 SGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGIL 398

Query: 234 PNAVAYSVLLNGASRHGIMEKLMELLEEMEKEGGNCSPNTVTYTSIIQSLCELGQPLEAL 293
           P+   ++ L+ G          MEL EEM  +G  C P+  TY  +I SLC  G+  EAL
Sbjct: 399 PDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKG--CEPDEFTYNMLIDSLCSKGKLDEAL 458

Query: 294 KILDRMEDLGCAPNRVTVSTLMKEFCKDGHMEEAYKLIDRIVARGGASYGDCYSSLVVSL 353
            +L +ME  GCA + +T +TL+  FCK     EA ++ D +   G +     Y++L+  L
Sbjct: 459 NMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGL 518

Query: 354 VKMKKIAEAEELFRNMLANGVKPDGVACSVMIKELCLEGRVVDGFNLCNEVDRNGYLTSI 413
            K +++ +A +L   M+  G KPD    + ++   C  G +    ++   +  NG     
Sbjct: 519 CKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNG--CEP 578

Query: 414 DSAIYSLLLVGLCEHDHFVDAAKLARLMLKKGIHLEPRYADSIIKHL 459
           D   Y  L+ GLC+      A+KL R +  KGI+L P   + +I+ L
Sbjct: 579 DIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGL 620

The following BLAST results are available for this feature:
BLAST of Lcy10g008430 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9LVS31.6e-11245.92Pentatricopeptide repeat-containing protein At5g47360 OS=Arabidopsis thaliana OX... [more]
P0C8A01.8e-4426.71Pentatricopeptide repeat-containing protein At3g49730 OS=Arabidopsis thaliana OX... [more]
O494362.5e-4133.83Pentatricopeptide repeat-containing protein At4g20090 OS=Arabidopsis thaliana OX... [more]
O044911.3e-3928.57Putative pentatricopeptide repeat-containing protein At1g09680 OS=Arabidopsis th... [more]
Q9LFF13.9e-3929.11Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidop... [more]
BLAST of Lcy10g008430 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1EQI22.9e-23986.95pentatricopeptide repeat-containing protein At5g47360 OS=Cucurbita moschata OX=3... [more]
A0A6J1I1256.5e-23986.74pentatricopeptide repeat-containing protein At5g47360 OS=Cucurbita maxima OX=366... [more]
A0A6J1DNK52.7e-23284.84pentatricopeptide repeat-containing protein At5g47360 OS=Momordica charantia OX=... [more]
A0A0A0LI441.3e-23184.63Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G123590 PE=4 SV=1[more]
A0A1S3B4L91.8e-22081.89pentatricopeptide repeat-containing protein At5g47360 OS=Cucumis melo OX=3656 GN... [more]
BLAST of Lcy10g008430 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6579716.14.2e-24087.16Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
KAG7017159.15.5e-24087.16Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
XP_023551479.12.1e-23986.95pentatricopeptide repeat-containing protein At5g47360 [Cucurbita pepo subsp. pep... [more]
XP_022928928.16.1e-23986.95pentatricopeptide repeat-containing protein At5g47360 [Cucurbita moschata][more]
XP_022969835.11.4e-23886.74pentatricopeptide repeat-containing protein At5g47360 [Cucurbita maxima][more]
BLAST of Lcy10g008430 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G47360.11.1e-11345.92Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT3G49730.11.3e-4526.71Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT4G20090.11.7e-4233.83Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G09680.19.6e-4128.57Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G53700.12.8e-4029.11Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR033443Pentacotripeptide-repeat region of PRORPPFAMPF17177PPR_longcoord: 117..271
e-value: 4.0E-15
score: 55.7
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 235..264
e-value: 5.8E-4
score: 17.9
coord: 343..375
e-value: 1.5E-6
score: 26.0
coord: 272..305
e-value: 1.3E-8
score: 32.5
coord: 307..336
e-value: 0.0011
score: 17.0
coord: 200..234
e-value: 6.4E-9
score: 33.5
coord: 166..198
e-value: 2.6E-6
score: 25.2
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 301..331
e-value: 3.0E-8
score: 33.2
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 415..444
e-value: 0.97
score: 9.8
coord: 343..372
e-value: 0.0029
score: 17.7
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 305..339
score: 9.580234
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 233..267
score: 9.624079
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 340..374
score: 9.898111
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 270..304
score: 12.802855
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 198..232
score: 13.120733
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 163..197
score: 11.290196
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 412..446
score: 9.032168
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 35..192
e-value: 7.2E-16
score: 60.3
coord: 193..259
e-value: 1.4E-19
score: 72.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 260..344
e-value: 1.0E-21
score: 79.6
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 345..471
e-value: 9.4E-17
score: 63.4
NoneNo IPR availablePANTHERPTHR45613PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 18..471
NoneNo IPR availablePANTHERPTHR45613:SF82PPR CONTAINING PLANT-LIKE PROTEINcoord: 18..471

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy10g008430.1Lcy10g008430.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding