Lcy10g008340 (gene) Sponge gourd (P93075) v1

Overview
NameLcy10g008340
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionCCHC-type domain-containing protein
LocationChr10: 34007939 .. 34010281 (+)
RNA-Seq ExpressionLcy10g008340
SyntenyLcy10g008340
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAAGAAGGTAGATAATAAAACAAAGAAAGTTATAGGGTAGAAGTAGAGTAAAACCAAAACTAAAAATCAAATGTTTATCAAACGAGACCTTAGTTATCAATTTTTTTTTTTTTTTTTTTTTTGAGATTTTAATTTGTATGAAGGGTTTGCTATCTATAATTTGAACTAGTATTCTCAAGAGTGTCTCTACTTTTTTATTTGTCTTTTGAATCAATGACCTTTAGGGTAGTCCAAGAATATTGGTTAATAGAAATAATCATTTTTTTAGGAAAGTTTGGTGTAACTTGAATAGTAGAAGGTGCTTGAATTTTTTAAAAAGTATATTATGAAGTATTTAATTAGTTTTTTTTTTATAATAATTTTTGTTCTAAAAAACAATATCCTACTGCACACTCCCAATATGAACTTTATGAGAAAGGTTTGTGTCAAGTTTGAGTGTTTGACAATGGAACAATCTAATTACATGAGCTTATAAGTCTCTCACTTTATGTATGATTATTTTGGAGGCTTTATTTCAAACATGATTTATGCTAATTGATAATCAATATTGTATTAATCTTTTTTTTTCTTTTGAGAAAATATTGTATTAATCTTATATAACAAAGATCCAAGTTCAATTCATGAATATAATTAGTGCGGGTGTTGCCCAAAAAAAAAAAAAAACAGATGTATAATTATTAGTGAGGGTTGAGCTCACATGAAAATGTTTAATAAAATTTAATAGTTAAACAGAAATTATGGAAATTAGACAACCGATATTTCACAAATGTCTAATTTTGAAAAAAAATTATCAACTTTGTCTTGGTTCAAGATTTTCCAGCTAAATTCTTTCTATTTTACCCTTTAATATTCATATGTGATTTTTTCAATAATGAAATTCACCGTTAAAAGACAAATTAATTAGTCTCGAATGCTTGGGCATGAGACTTAGGTCAATTTTGCGATTGGTTTCTCAAGGATTCGTTGAATTCTTGCAGGTGTGTTTTCAAGGTCTTGTGTGTTGATTCAATGGAGGCAGATGCTTTGCTAGAGGGATGTCATAAGCTACGGCTAACGTCTGATGAGGAAGAGGTGGCGATTGATGTGGATCGGGTGGTGCTAGATGAAACTTTGAACAGGATGTGGTTCTGCTTGGCCGGGAAGCTGCTCAGCCCCAGACCAATTGCGTGTGAGGTGTTGCGCTGAACGCTTTCCATTGCTCGGCTAGTCGATGATGGTTTACTTGTGGAGCGTCTAGGTAAGAATGTGTTCCTTTTCAAGTTTGTTAAGTTGGTTGATCGCAATCGTGTGTTTCGTTCTGGCCCCTGGTTTTTCGACAAATTTCTACTTGTTCTGGAAATGTTGGATGCGCTTATTAAACCATTGGATCTTCTTTTTAACAAGGCTGCTTTTTCGATACATTTCTTTGATTTGCCTATGGCCTATATGAATGCTACAATGGCCAAGAAATTGGGTGAGGCTATTGGGGATTTTAAGGAAGTGGATTGCAACGCTGAAGGTTGTTGTTGGGGTATCAGTTTGTGGGTCCGTGTTCGGATTGATATCACTAAACCACTTCAGCGTGGTATCAAAATTAATGTAGATGGGTCGATTGGGGGTTGCTGGATTCTGATGAGATATGAACGACTTCCTAAGTTTTGCGCTCGGTGTGGTATATTGGGTCATGGTCTGAAGGATAGGCCTGTGTTGTTTTCGACAGAGGGCCCTAAAACTGGTTTGGGGTACGAGTATGGGTCGTGGCTGCGTTTCGATGGTCCTTTGAAGCCGGCAAGTAAAAATGTTTCTAGAAGTAACCTGTCAGTGCTGGTGGCTTCTCAGGGCGAGGTCAAAATGGTGCAGCCTGTAGGAGATTCTTTGGTCCTCTCTATAGCGACGGTGTCGGCGTCAACTACAGCAGTTGTTGGTGAGGGGGTAGTGTCGTTAAATTCGAGGCCTAGTCCGATTATGGCTGCATCAGAGGTGGTTACAGATTCTGAGATGGTTGGAATTGATGGTTCGGTTAAGGGGCCTGCTATTCTGGAAGGTAGTTTCGTGGGGTCAATGGAAATTGAAACTGTCTCAATGGTTGGTGATTTGGGCCAAGGAAATGTGGGCCAGGCTGTTTTTGTTGGTTAAAGGGTAGGGGCAGTAAGTGGAAGCGCAAGGCACGTGCGTGTAATGCTGAATCTTCTAAAGATGGGCTTGATATTGCTAAAAGGAAGGGTGTTCTGGGCCAATTGGGCTCTATCAGTAAGAAGTTGAAAGTTGTGGAAGAAGACAGTGTTAATGTTGGTTTTGACGGTACCGGTCTTGCAAATGTATCGGCGGACGCTGTGGAGCAACCTCGCCAGGAGTTATGA

mRNA sequence

ATGGGAAGAAGGTGTGTTTTCAAGGTCTTGTGTGTTGATTCAATGGAGGCAGATGCTTTGCTAGAGGGATGTCATAAGCTACGGCTAACGTCTGATGAGGAAGAGGTGGCGATTGATGTGGATCGGGTGGTGCTAGATGAAACTTTGAACAGGATGTGGTTCTGCTTGGCCGGGAAGCTGCTCAGCCCCAGACCAATTGCGTTCGATGATGGTTTACTTGTGGAGCGTCTAGGTAAGAATGTGTTCCTTTTCAAGTTTGTTAAGTTGGTTGATCGCAATCGTGTGTTTCGTTCTGGCCCCTGGTTTTTCGACAAATTTCTACTTGTTCTGGAAATGTTGGATGCGCTTATTAAACCATTGGATCTTCTTTTTAACAAGGCTGCTTTTTCGATACATTTCTTTGATTTGCCTATGGCCTATATGAATGCTACAATGGCCAAGAAATTGGGTGAGGCTATTGGGGATTTTAAGGAAGTGGATTGCAACGCTGAAGGTTGTTGTTGGGGTATCAGTTTGTGGGTCCGTGTTCGGATTGATATCACTAAACCACTTCAGCGTGGTATCAAAATTAATGTAGATGGGTCGATTGGGGGTTGCTGGATTCTGATGAGATATGAACGACTTCCTAAGTTTTGCGCTCGGTGTGGTATATTGGGTCATGGTCTGAAGGATAGGCCTGTGTTGTTTTCGACAGAGGGCCCTAAAACTGGTTTGGGGTACGAGTATGGGTCGTGGCTGCGTTTCGATGGTCCTTTGAAGCCGGCAAGTAAAAATGTTTCTAGAAGTAACCTGTCAGTGCTGGTGGCTTCTCAGGGCGAGGTCAAAATGGTGCAGCCTGTAGGAGATTCTTTGGTCCTCTCTATAGCGACGGTGTCGGCGTCAACTACAGCAGTTGTTGGTGAGGGGGTAGTGTCGTTAAATTCGAGGCCTAGTCCGATTATGGCTGCATCAGAGGTGGTTACAGATTCTGAGATGGTTGGAATTGATGGTTCGGTTAAGGGGCCTGCTATTCTGGAAGGCTGTTTTTGTTGGTTAAAGGGTAGGGGCAGTAAGTGGAAGCGCAAGGCACGTGCGTGTAATGCTGAATCTTCTAAAGATGGGCTTGATATTGCTAAAAGGAAGGGTGTTCTGGGCCAATTGGGCTCTATCAGTAAGAAGTTGAAAGTTGTGGAAGAAGACAGTGTTAATGTTGGTTTTGACGGTACCGGTCTTGCAAATGTATCGGCGGACGCTGTGGAGCAACCTCGCCAGGAGTTATGA

Coding sequence (CDS)

ATGGGAAGAAGGTGTGTTTTCAAGGTCTTGTGTGTTGATTCAATGGAGGCAGATGCTTTGCTAGAGGGATGTCATAAGCTACGGCTAACGTCTGATGAGGAAGAGGTGGCGATTGATGTGGATCGGGTGGTGCTAGATGAAACTTTGAACAGGATGTGGTTCTGCTTGGCCGGGAAGCTGCTCAGCCCCAGACCAATTGCGTTCGATGATGGTTTACTTGTGGAGCGTCTAGGTAAGAATGTGTTCCTTTTCAAGTTTGTTAAGTTGGTTGATCGCAATCGTGTGTTTCGTTCTGGCCCCTGGTTTTTCGACAAATTTCTACTTGTTCTGGAAATGTTGGATGCGCTTATTAAACCATTGGATCTTCTTTTTAACAAGGCTGCTTTTTCGATACATTTCTTTGATTTGCCTATGGCCTATATGAATGCTACAATGGCCAAGAAATTGGGTGAGGCTATTGGGGATTTTAAGGAAGTGGATTGCAACGCTGAAGGTTGTTGTTGGGGTATCAGTTTGTGGGTCCGTGTTCGGATTGATATCACTAAACCACTTCAGCGTGGTATCAAAATTAATGTAGATGGGTCGATTGGGGGTTGCTGGATTCTGATGAGATATGAACGACTTCCTAAGTTTTGCGCTCGGTGTGGTATATTGGGTCATGGTCTGAAGGATAGGCCTGTGTTGTTTTCGACAGAGGGCCCTAAAACTGGTTTGGGGTACGAGTATGGGTCGTGGCTGCGTTTCGATGGTCCTTTGAAGCCGGCAAGTAAAAATGTTTCTAGAAGTAACCTGTCAGTGCTGGTGGCTTCTCAGGGCGAGGTCAAAATGGTGCAGCCTGTAGGAGATTCTTTGGTCCTCTCTATAGCGACGGTGTCGGCGTCAACTACAGCAGTTGTTGGTGAGGGGGTAGTGTCGTTAAATTCGAGGCCTAGTCCGATTATGGCTGCATCAGAGGTGGTTACAGATTCTGAGATGGTTGGAATTGATGGTTCGGTTAAGGGGCCTGCTATTCTGGAAGGCTGTTTTTGTTGGTTAAAGGGTAGGGGCAGTAAGTGGAAGCGCAAGGCACGTGCGTGTAATGCTGAATCTTCTAAAGATGGGCTTGATATTGCTAAAAGGAAGGGTGTTCTGGGCCAATTGGGCTCTATCAGTAAGAAGTTGAAAGTTGTGGAAGAAGACAGTGTTAATGTTGGTTTTGACGGTACCGGTCTTGCAAATGTATCGGCGGACGCTGTGGAGCAACCTCGCCAGGAGTTATGA

Protein sequence

MGRRCVFKVLCVDSMEADALLEGCHKLRLTSDEEEVAIDVDRVVLDETLNRMWFCLAGKLLSPRPIAFDDGLLVERLGKNVFLFKFVKLVDRNRVFRSGPWFFDKFLLVLEMLDALIKPLDLLFNKAAFSIHFFDLPMAYMNATMAKKLGEAIGDFKEVDCNAEGCCWGISLWVRVRIDITKPLQRGIKINVDGSIGGCWILMRYERLPKFCARCGILGHGLKDRPVLFSTEGPKTGLGYEYGSWLRFDGPLKPASKNVSRSNLSVLVASQGEVKMVQPVGDSLVLSIATVSASTTAVVGEGVVSLNSRPSPIMAASEVVTDSEMVGIDGSVKGPAILEGCFCWLKGRGSKWKRKARACNAESSKDGLDIAKRKGVLGQLGSISKKLKVVEEDSVNVGFDGTGLANVSADAVEQPRQEL
Homology
BLAST of Lcy10g008340 vs. ExPASy TrEMBL
Match: A0A6J1DU55 (uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023135 PE=4 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 1.5e-58
Identity = 120/256 (46.88%), Postives = 159/256 (62.11%), Query Frame = 0

Query: 15  MEADALLEGCHKLRLTSDEEEVAIDVDRVVLDETLNRMWFCLAGKLLSPRPIAFD----- 74
           M+ + LL    K +LTS+E+E+A+DVD   +      + + L GKLL+ R I+ D     
Sbjct: 1   MDHENLLADWQKFKLTSEEDEIAMDVDVDAVKMAEQGLAYSLVGKLLAKRIISADVLSRV 60

Query: 75  --------DGLLVERLGKNVFLFKFVKLVDRNRVFRSGPWFFDKFLLVLEMLDALIKPLD 134
                     L VE +GKN+FLF F +  D NRV ++GPWFFDK L+VL+   +     +
Sbjct: 61  LLLAWKVEHQLTVESIGKNLFLFHFCRECDMNRVMKTGPWFFDKALIVLQKPCSSKNISE 120

Query: 135 LLFNKAAFSIHFFDLPMAYMNATMAKKLGEAIGDFKEVDCNAEGCCWGISLWVRVRIDIT 194
           L FN+ AF IH FDLPM+++N TMA +LG AIG+F +VDCN +G  WG SL +RV IDIT
Sbjct: 121 LEFNRVAFWIHLFDLPMSWLNKTMAIRLGNAIGNFVDVDCNEKGFSWGASLRIRVLIDIT 180

Query: 195 KPLQRGIKINVDGSIGGCWILMRYERLPKFCARCGILGHGLKDRPVLFSTEGPKTGLGYE 254
           KPL+RGIKIN+DG +GGCWI ++YERLP FC  CG++GH   D    +      +    E
Sbjct: 181 KPLRRGIKINIDGPMGGCWIPIQYERLPDFCYFCGVIGHSSHDCDARYLAAQDDSRATSE 240

Query: 255 YGSWLRFDGPLKPASK 258
           YG WLRF G    A K
Sbjct: 241 YGPWLRFVGSKAGAQK 256

BLAST of Lcy10g008340 vs. ExPASy TrEMBL
Match: A0A6J1BSZ1 (uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005481 PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 1.6e-50
Identity = 110/250 (44.00%), Postives = 146/250 (58.40%), Query Frame = 0

Query: 15  MEADALLEGCHKLRLTSDEEEVAIDVDRVVLDETLNRMWFCLAGKLLSPRPIAFD----- 74
           M A  LLE     +LTS+E+++A+D+D   L+ T   +   L  KLLS R I+       
Sbjct: 1   MAASNLLEEWKNFKLTSEEDKIAVDIDSSALEGTGKCLELSLICKLLSKRSISCTVLKNT 60

Query: 75  ---------DGLLVERLGKNVFLFKFVKLVDRNRVFRSGPWFFDKFLLVLEMLDALIKPL 134
                        V+ +G N+FLF F +  DRNR+ R GPW FD+ L++++   +L KPL
Sbjct: 61  LKIAWKLDCKAFSVDIIGFNIFLFNFNRSSDRNRILRMGPWTFDRALIIIDNPVSLTKPL 120

Query: 135 DLLFNKAAFSIHFFDLPMAYMNATMAKKLGEAIGDFKEVDCNAEGCCWGISLWVRVRIDI 194
           D+ F   +  +HFFDL +A MN TMA +LG AIG F++V+ NA   CWG  L VRVR D+
Sbjct: 121 DMDFRNVSLWVHFFDLSLACMNKTMATRLGNAIGLFEDVESNANNFCWGSCLRVRVRFDV 180

Query: 195 TKPLQRGIKINVDGSIGGCWILMRYERLPKFCARCGILGHGLKDRPVLFSTEGPKTGLGY 251
            KPL RGIK+N+DG +GGCWI ++YERLP F   CG L H LKD          K     
Sbjct: 181 MKPLHRGIKLNLDGPMGGCWIPIQYERLPDFRYHCGRLDHILKDCSDCCVDSVSK---NL 240

BLAST of Lcy10g008340 vs. ExPASy TrEMBL
Match: A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 1.1e-48
Identity = 126/332 (37.95%), Postives = 175/332 (52.71%), Query Frame = 0

Query: 20  LLEGCHKLRLTSDEEEVAIDVDRVVLDETLNRMWFCLAGKLLSPRPIAF----------- 79
           LLE     +LTS+EEE AIDVD      T +R+   L GKL   RPI             
Sbjct: 6   LLEEWKNFKLTSEEEETAIDVDASAPATTGSRLEQILVGKLFIKRPITCPVMKNTMRTAW 65

Query: 80  ---DDGLLVERLGKNVFLFKFVKLVDRNRVFRSGPWFFDKFLLVLEMLDALIKPLDLLFN 139
              ++   V+ LG N+FLF F + +DRN++++SGPW FD+ L+++    ALI P +L F 
Sbjct: 66  KLENNAFEVQSLGYNLFLFSFARALDRNKIYKSGPWTFDRTLVLINKPVALIPPSELDFT 125

Query: 140 KAAFSIHFFDLPMAYMNATMAKKLGEAIGDFKEVDCNAEGCCWGISLWVRVRIDITKPLQ 199
           K    + FFDLP+  +   MA +LG A+G F+E DC+     WG +L VRV +DI+KPL+
Sbjct: 126 KLPIWVRFFDLPLGCITRDMAIRLGNALGGFEEADCDDLNPDWGSNLRVRVMLDISKPLR 185

Query: 200 RGIKINVDGSIGGCWILMRYERLPKFCARCGILGHGLKDRPVLFSTEGPKTGLGYEYGSW 259
           RGIK+N+DG IGG WI ++YERLP FC  CG+     K                ++YGSW
Sbjct: 186 RGIKLNLDGPIGGAWIPIQYERLPDFCYHCGLSSSRKK----------------HQYGSW 245

Query: 260 LRFDGPLKPASKNVSRSNLSVLVASQGEVKMVQPVGDSLVLSIATVSASTTAVVGEGVVS 319
           LR+ G +KP                    +M QP  D L  S     +S+T+ VG G   
Sbjct: 246 LRYQGTVKPTMP-----------------QMKQPQEDLLDKSGNNSFSSSTSPVGAGSQG 304

Query: 320 LNSRPS--PIMAASE-VVTDSEMVGIDGSVKG 335
           + S P+  PI    E  VT++   G + S +G
Sbjct: 306 VQSAPATGPIAIPMESPVTETPKKGAEPSQQG 304

BLAST of Lcy10g008340 vs. ExPASy TrEMBL
Match: A0A2N9FJK9 (CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS14993 PE=4 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 1.8e-35
Identity = 90/244 (36.89%), Postives = 124/244 (50.82%), Query Frame = 0

Query: 17  ADALLEGCHKLRLTSDEEEVAIDVDRVVLDETLNRMWFCLAGKLLSP------------- 76
           AD L+E   +  LT DE    I  +  + D  +     CL GKLL+              
Sbjct: 2   ADELVEDWRRFSLTEDEAPGFIIAEEAMGDSEVIGS-HCLLGKLLTAKFCNKAALKATML 61

Query: 77  RPIAFDDGLLVERLGKNVFLFKFVKLVDRNRVFRSGPWFFDKFLLVLEMLDALIKPLDLL 136
           R      G++ + +G+N+FLF+F    D  RV    PW FD  LLVL + D       + 
Sbjct: 62  RIWGAASGVVAQDMGRNLFLFQFQNDADCKRVLHGSPWLFDNNLLVLNVFDGSCPANQIS 121

Query: 137 FNKAAFSIHFFDLPMAYMNATMAKKLGEAIGDFKEVDCNAEGCCWGISLWVRVRIDITKP 196
           FN   F + F  +P+ YM     ++LGEAIG+ + VD +A G  WG  L VR+ +D+TKP
Sbjct: 122 FNHCCFWVQFHGIPLFYMTKQTGERLGEAIGNVETVDVSANGVGWGPYLRVRISLDVTKP 181

Query: 197 LQRGIKINVDGSIGGCWILMRYERLPKFCARCGILGHGLKDRPVLFSTEGPKTGLGYEYG 248
           LQRG ++   GS G  WI  +YERLP  C  CG LGHG ++  +   + G  +G    YG
Sbjct: 182 LQRG-RLITFGSSGQQWIAFKYERLPWLCFHCGKLGHGERECGLKIHSGGALSGEFKHYG 241

BLAST of Lcy10g008340 vs. ExPASy TrEMBL
Match: A0A5C7IJL3 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_004194 PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 7.0e-35
Identity = 89/266 (33.46%), Postives = 145/266 (54.51%), Query Frame = 0

Query: 9   VLCVDSMEADALLEGCHKLRLTSDEEEVAIDVDRVVLDETLNRMWFCLAGKLLSPRPIAF 68
           VL + +M A+ +   C  L +  ++ E+   +   V +E +  +  CL GK+LS + +  
Sbjct: 73  VLGLANMSANEIARLCENLSIKDEDREIH-QISEDVGEEGVQDVDHCLVGKVLSGKRVNR 132

Query: 69  DDGLLV-------------ERLGKNVFLFKFVKLVDRNRVFRSGPWFFDKFLLVLEMLDA 128
           +  + V             E +G+NVF+F F    DR+RV++ GPW FDK L+VLEM + 
Sbjct: 133 EAFISVIEHLWNPFGKVEIESVGENVFMFHFQNPEDRSRVWQRGPWHFDKSLIVLEMPEG 192

Query: 129 LIKPLDLLFNKAAFSIHFFDLPMAYMNATMAKKLGEAIGDFKEVDCNAEGCCWGISLWVR 188
             +   L FNKA F +   D+P+  MN   AK L E IG+  E+   +   CWG  L V+
Sbjct: 193 TGEIAKLRFNKADFWVQIHDIPIMCMNRRSAKWLAEQIGEVIEIPSESRD-CWGKFLRVK 252

Query: 189 VRIDITKPLQRGIKINVDGSIGGCWILMRYERLPKFCARCGILGHGLKDRPVLFSTEGPK 248
           VRIDI++PL+R +++++D S     + ++YER+P+FC  CG +GHG+ +   + + +   
Sbjct: 253 VRIDISRPLKRWLRLSLDKSGNVVVVGLKYERMPEFCFACGRVGHGINECSDIEAKKEAM 312

Query: 249 TGLGYEYGSWLRFDGPLKPASKNVSR 262
            G    +G W+R     KP  K+ S+
Sbjct: 313 EGNNPRFGLWMRAPTTDKPKDKSSSQ 336

BLAST of Lcy10g008340 vs. NCBI nr
Match: XP_022156185.1 (uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncharacterized protein LOC111023135 [Momordica charantia])

HSP 1 Score: 236.9 bits (603), Expect = 3.2e-58
Identity = 120/256 (46.88%), Postives = 159/256 (62.11%), Query Frame = 0

Query: 15  MEADALLEGCHKLRLTSDEEEVAIDVDRVVLDETLNRMWFCLAGKLLSPRPIAFD----- 74
           M+ + LL    K +LTS+E+E+A+DVD   +      + + L GKLL+ R I+ D     
Sbjct: 1   MDHENLLADWQKFKLTSEEDEIAMDVDVDAVKMAEQGLAYSLVGKLLAKRIISADVLSRV 60

Query: 75  --------DGLLVERLGKNVFLFKFVKLVDRNRVFRSGPWFFDKFLLVLEMLDALIKPLD 134
                     L VE +GKN+FLF F +  D NRV ++GPWFFDK L+VL+   +     +
Sbjct: 61  LLLAWKVEHQLTVESIGKNLFLFHFCRECDMNRVMKTGPWFFDKALIVLQKPCSSKNISE 120

Query: 135 LLFNKAAFSIHFFDLPMAYMNATMAKKLGEAIGDFKEVDCNAEGCCWGISLWVRVRIDIT 194
           L FN+ AF IH FDLPM+++N TMA +LG AIG+F +VDCN +G  WG SL +RV IDIT
Sbjct: 121 LEFNRVAFWIHLFDLPMSWLNKTMAIRLGNAIGNFVDVDCNEKGFSWGASLRIRVLIDIT 180

Query: 195 KPLQRGIKINVDGSIGGCWILMRYERLPKFCARCGILGHGLKDRPVLFSTEGPKTGLGYE 254
           KPL+RGIKIN+DG +GGCWI ++YERLP FC  CG++GH   D    +      +    E
Sbjct: 181 KPLRRGIKINIDGPMGGCWIPIQYERLPDFCYFCGVIGHSSHDCDARYLAAQDDSRATSE 240

Query: 255 YGSWLRFDGPLKPASK 258
           YG WLRF G    A K
Sbjct: 241 YGPWLRFVGSKAGAQK 256

BLAST of Lcy10g008340 vs. NCBI nr
Match: XP_022132681.1 (uncharacterized protein LOC111005481 [Momordica charantia])

HSP 1 Score: 210.3 bits (534), Expect = 3.2e-50
Identity = 110/250 (44.00%), Postives = 146/250 (58.40%), Query Frame = 0

Query: 15  MEADALLEGCHKLRLTSDEEEVAIDVDRVVLDETLNRMWFCLAGKLLSPRPIAFD----- 74
           M A  LLE     +LTS+E+++A+D+D   L+ T   +   L  KLLS R I+       
Sbjct: 1   MAASNLLEEWKNFKLTSEEDKIAVDIDSSALEGTGKCLELSLICKLLSKRSISCTVLKNT 60

Query: 75  ---------DGLLVERLGKNVFLFKFVKLVDRNRVFRSGPWFFDKFLLVLEMLDALIKPL 134
                        V+ +G N+FLF F +  DRNR+ R GPW FD+ L++++   +L KPL
Sbjct: 61  LKIAWKLDCKAFSVDIIGFNIFLFNFNRSSDRNRILRMGPWTFDRALIIIDNPVSLTKPL 120

Query: 135 DLLFNKAAFSIHFFDLPMAYMNATMAKKLGEAIGDFKEVDCNAEGCCWGISLWVRVRIDI 194
           D+ F   +  +HFFDL +A MN TMA +LG AIG F++V+ NA   CWG  L VRVR D+
Sbjct: 121 DMDFRNVSLWVHFFDLSLACMNKTMATRLGNAIGLFEDVESNANNFCWGSCLRVRVRFDV 180

Query: 195 TKPLQRGIKINVDGSIGGCWILMRYERLPKFCARCGILGHGLKDRPVLFSTEGPKTGLGY 251
            KPL RGIK+N+DG +GGCWI ++YERLP F   CG L H LKD          K     
Sbjct: 181 MKPLHRGIKLNLDGPMGGCWIPIQYERLPDFRYHCGRLDHILKDCSDCCVDSVSK---NL 240

BLAST of Lcy10g008340 vs. NCBI nr
Match: XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia])

HSP 1 Score: 204.1 bits (518), Expect = 2.3e-48
Identity = 126/332 (37.95%), Postives = 175/332 (52.71%), Query Frame = 0

Query: 20  LLEGCHKLRLTSDEEEVAIDVDRVVLDETLNRMWFCLAGKLLSPRPIAF----------- 79
           LLE     +LTS+EEE AIDVD      T +R+   L GKL   RPI             
Sbjct: 6   LLEEWKNFKLTSEEEETAIDVDASAPATTGSRLEQILVGKLFIKRPITCPVMKNTMRTAW 65

Query: 80  ---DDGLLVERLGKNVFLFKFVKLVDRNRVFRSGPWFFDKFLLVLEMLDALIKPLDLLFN 139
              ++   V+ LG N+FLF F + +DRN++++SGPW FD+ L+++    ALI P +L F 
Sbjct: 66  KLENNAFEVQSLGYNLFLFSFARALDRNKIYKSGPWTFDRTLVLINKPVALIPPSELDFT 125

Query: 140 KAAFSIHFFDLPMAYMNATMAKKLGEAIGDFKEVDCNAEGCCWGISLWVRVRIDITKPLQ 199
           K    + FFDLP+  +   MA +LG A+G F+E DC+     WG +L VRV +DI+KPL+
Sbjct: 126 KLPIWVRFFDLPLGCITRDMAIRLGNALGGFEEADCDDLNPDWGSNLRVRVMLDISKPLR 185

Query: 200 RGIKINVDGSIGGCWILMRYERLPKFCARCGILGHGLKDRPVLFSTEGPKTGLGYEYGSW 259
           RGIK+N+DG IGG WI ++YERLP FC  CG+     K                ++YGSW
Sbjct: 186 RGIKLNLDGPIGGAWIPIQYERLPDFCYHCGLSSSRKK----------------HQYGSW 245

Query: 260 LRFDGPLKPASKNVSRSNLSVLVASQGEVKMVQPVGDSLVLSIATVSASTTAVVGEGVVS 319
           LR+ G +KP                    +M QP  D L  S     +S+T+ VG G   
Sbjct: 246 LRYQGTVKPTMP-----------------QMKQPQEDLLDKSGNNSFSSSTSPVGAGSQG 304

Query: 320 LNSRPS--PIMAASE-VVTDSEMVGIDGSVKG 335
           + S P+  PI    E  VT++   G + S +G
Sbjct: 306 VQSAPATGPIAIPMESPVTETPKKGAEPSQQG 304

BLAST of Lcy10g008340 vs. NCBI nr
Match: XP_028075299.1 (uncharacterized protein LOC114277599 [Camellia sinensis])

HSP 1 Score: 162.9 bits (411), Expect = 5.9e-36
Identity = 108/345 (31.30%), Postives = 166/345 (48.12%), Query Frame = 0

Query: 17  ADALLEGCHKLRLTSDEEEVAIDVDRVVLDETLNRMWFCLAGKLLSPRPIAFD------- 76
           AD+L +   +L LT  EEE  + V+ V L  T  ++  CL GKLL+ RP  F+       
Sbjct: 2   ADSLNDLARRLVLTK-EEEAEVVVEEVHLQPTEAKVGLCLVGKLLTTRPFNFEALRTTLT 61

Query: 77  ------DGLLVERLGKNVFLFKFVKLVDRNRVFRSGPWFFDKFLLVLEMLDALIKPLDLL 136
                  G++ + LG N+FL KF  +VD+ RV  +GPW FDK L++    D  + PLD+ 
Sbjct: 62  AVWRASKGIVFKTLGDNLFLIKFGHIVDKRRVMLNGPWNFDKQLVMWRDFDGDLLPLDIT 121

Query: 137 FNKAAFSIHFFDLPMAYMNATMAKKLGEAIGDFKEVDCNAEGCCWGISLWVRVRIDITKP 196
           F+   F +H  +LP+  M   +   LG  +G F +++    G  WG SL +RV I+I KP
Sbjct: 122 FSTMEFWVHVSNLPLISMTRDVGVLLGNQLGRFVDMEYGDGGIAWGQSLCIRVAINIVKP 181

Query: 197 LQRGIKINVDGSIGGCWILMRYERLPKFCARCGILGHGLKDRPVLFSTE--GPKTGLGYE 256
           L+R +K+ + G     WI + YE+LP FC  CG+LGH + D     ST+  G K G    
Sbjct: 182 LRRELKLALSGR-ESVWITLTYEKLPNFCFHCGLLGHSVHD----CSTKILGGKEGESVR 241

Query: 257 YGSWLRFDGPLKPASKNVSRSNLSVLVASQGEVKMVQPVGDSL---------VLSIATVS 316
               L  D  ++   +    ++  V V ++      + +G S          +  IA + 
Sbjct: 242 NSKMLSKDVDVQQGGQGDGSNHSFVPVTAKHRSPEKESMGQSKSGKDNLAPPITGIACIP 301

Query: 317 ASTTAVVGEGVVSLNSRPSPIMAASEVVTDSEMVGIDGSVKGPAI 338
           A   A +G     L     P+    ++ T    VG+D  + GP +
Sbjct: 302 ADLVASLG----GLEGGDLPLAPRPDIQTTEGWVGLDHDLHGPNV 336

BLAST of Lcy10g008340 vs. NCBI nr
Match: XP_028117212.1 (uncharacterized protein LOC114314884 [Camellia sinensis])

HSP 1 Score: 160.2 bits (404), Expect = 3.8e-35
Identity = 84/248 (33.87%), Postives = 133/248 (53.63%), Query Frame = 0

Query: 17  ADALLEGCHKLRLTSDEEEVAIDVDRVVLDETLNRMWFCLAGKLLSPRPIAFD------- 76
           AD++ +   +L LT +EEE  + VD V +  T      CL GKLL+ RP   D       
Sbjct: 2   ADSIEDLAWRLVLT-EEEEAEVVVDEVHIHSTEANAGLCLVGKLLTMRPFNMDALRSTLT 61

Query: 77  ------DGLLVERLGKNVFLFKFVKLVDRNRVFRSGPWFFDKFLLVLEMLDALIKPLDLL 136
                  G++ +  G N+ L +F  +VD+ RV  +GPW FDK L++L+  +  ++P ++ 
Sbjct: 62  SVWKASKGVVFKTFGDNLVLIQFGHIVDKRRVMINGPWSFDKQLVMLKEFNRALQPSEIT 121

Query: 137 FNKAAFSIHFFDLPMAYMNATMAKKLGEAIGDFKEVDCNAEGCCWGISLWVRVRIDITKP 196
           F+   F +H  +LP+  M   +   LG  +G F +++    G  WG +L +R+ I+I KP
Sbjct: 122 FSTMEFWVHASNLPLISMTRDVGVLLGNTLGKFVDMEYGDGGIAWGRALHIRIEINIDKP 181

Query: 197 LQRGIKINVDGSIGGCWILMRYERLPKFCARCGILGHGLKDRPVLFSTEGPKTGLGYEYG 252
           L+RG+K+ + G     WI ++YERLP FC  CG+LGH + D          +  +  +YG
Sbjct: 182 LRRGLKLALGGQ-EPVWITLQYERLPNFCFHCGLLGHSVHDCGNRLLEGAHREEVRLQYG 241

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DU551.5e-5846.88uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A6J1BSZ11.6e-5044.00uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005... [more]
A0A6J1DX301.1e-4837.95uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
A0A2N9FJK91.8e-3536.89CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS1499... [more]
A0A5C7IJL37.0e-3533.46CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_00419... [more]
Match NameE-valueIdentityDescription
XP_022156185.13.2e-5846.88uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncha... [more]
XP_022132681.13.2e-5044.00uncharacterized protein LOC111005481 [Momordica charantia][more]
XP_022158377.12.3e-4837.95uncharacterized protein LOC111024874 [Momordica charantia][more]
XP_028075299.15.9e-3631.30uncharacterized protein LOC114277599 [Camellia sinensis][more]
XP_028117212.13.8e-3533.87uncharacterized protein LOC114314884 [Camellia sinensis][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025836Zinc knuckle CX2CX4HX4CPFAMPF14392zf-CCHC_4coord: 178..221
e-value: 3.3E-11
score: 42.7
IPR025558Domain of unknown function DUF4283PFAMPF14111DUF4283coord: 74..169
e-value: 5.0E-15
score: 55.3
IPR040256Uncharacterized protein At4g02000-likePANTHERPTHR31286GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1.8-LIKEcoord: 26..231
NoneNo IPR availablePANTHERPTHR31286:SF84SUBFAMILY NOT NAMEDcoord: 26..231

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy10g008340.1Lcy10g008340.1mRNA