Lcy10g008280 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGTCTTCTTCAAGTCTTTCTTCCGCTGCTGACGACCGATTACCGGTCTTGTCCTCGTCAACCACTAATCCTGTCACTACTCCTATTCCCTCTCAGCGTAATAATCCAAATGTTTCCACCCCGTTATCTACTGGTTTTCCCCGAACCCTCAACCCTAATGTCCCTCTGTTTACCACTGGTATGAACCCTGGTTTTCTTCAGCATCCAGTCTTATCTTCTGCTTCTCCGAGCCATGGTTTTCAGTACCCCCCACTGTTGGTCGCTACTGCAAGCGCACGGTATCGCAAGTAATATAAAACGGAAGAATTCCGAGTATCGAATCCATAGGGAGGCGAAGCGAAATTTAAGCAAGCAAAGATTCCTAGAGCACTAAAAATACTTGGGATAAACAATATTTAGGGACCAGATCATGCAATCAAAGAAAATTAAAAATCAAAACAATTAGAGAGAAAATTTGATCAATCGATAAAAATAAAATGCGGAGAAAGAGTTTTCTAATGGGAAGAGGGGTCTTGAAAATCAATTATTAGCTAAACAATTGCTACAATTGTCCTATCTCGTTGCCCAACTAATTATACTCCTAGAATCTCCGTTAATAACATAGGTTCTCCTGTCGGTCTCCCCTAATTGTAATTAATTTATTTTAACAACCTAAGTGTCCTTAGCGCCATTAAAAATCATTAATTATTACGCTCTGATTCATTTTAGGAATCTGAGTTTAATCAACTAATCCCGTTGTCACGACGGGCAATTAAACTAGTTGCATGGATTACGATTTATCCTAACTTCTCTCCGTCGAGTTTCCATTAAGAATCAGATCAGTACACAATTGGCTAGATTGCATAAAGCATTAAGCACATCCATACAAATAATTAGGACAAAGGGCTAGAGATAGGCAATTATAACAACATTTGAACTATAATTTCATTTCAAGACCCCAAATTGGGGTTTAGCTATACATAGCTAAAGTATTCACAATAATTACAACGGAAAGCATAATAAAGAGCATAATAAAAGGGAAGGAATTGACCGTAGAAGACCCCTTCGCTACGCTTGGAGTCCCTCCGAAAACTCCTTGAGCCTCCTAGGATGCTCCCTAAAATTCCCCAAAATTTTCCCACTAAGAAAGCTCTCAAAAGGCTAGAAAGCCTTGAGAGTGGCTCCAAGGGAGCCAAAGAAAGAAAGGAAGGAATGAGGAAATGATGATTGATGTCTAAAATGAGGCACCAAGGGGCGCCTTTTATAGGCTCGGAAATGGGGTAGCGTCGCGACGCTGTGACATCATCAACTTGCCGGTCAAGAAATGGACAGCGTCTCGACGCTAGGCGTTTTCCAGACTTTCCAGCTGCGGATTGGGCTTCTTTGCTTGGGCCAACTTCAATTCTTTTTGGGCTTTTTCTTCATAATTGTCCTCTTTTGACTCCCCTTGACCCAAGCATGGAAATTGGGCTTGAATGGCTTCATTTTGGACACTTTTTCCATGAAATCCACAACTTTGCTCCTAAAGACCAAATAACAAAATATATGAAATATTTTCAATAAAAACACAATTAAAGCACAAAAAAGCCTAATAAATTGGGACTAAAATAGCTACATTTCTGCTCGCTATCACCCACCCTTTTCTTCTGCTCCGACTGTGTTTCCACCTTTCAATGTCGCTCAACAACCTTTTCCCCAAATTCCCCAAACTTCTTCTCCGTATCCCTCCCTCACCCCTCCCCTGCACATCAAATTGTCGAATTCGAGAATTACCTTTTATGGAAGAATCAACTGCTTAACCATATTATTGCTTTCGATATGGAAGGTTTTCATAAATGGCACTTTGGCTCCACAACGGTTCTTGGATACAGCTCAGACCCAGGTAAATCCGCAATTTCTTGTTTGGAAAAACTTGATGCGCAAATTGCTTACCGCAAGTGTACGGGTCAAGTAATAATATAGTGTTTTCGTGTAAAACGAGTGTCGTCCTCTGGATTGGTTTTCTAGCAAATTAAGTACCGTGAATACTTTTGTTCAATTTTATTTAGGGAGCAAAACTTAATGAAAAAGATAAATCTAAAGACAAAAAACATAAAATAAAGGTGGAGACTCAAAGGGAAAGACCCTTAGGGAATTGATTTCATTATTTAAGATTGAGGATTGATTAACAGGAATGAATTGATCGTGCAATTATTCTACAAGCCAAGGAAACTTTTATCATGATTACCTCTCCCGAGTATAATTGATTCTCATGCATATAACTAACTTGATATCCCTATCTAAGTTCATTAACATGCAAGGCATTATTCGGTTTAATCCTTGTTATACTTCTAGAGATATTCCAAATCCTATCACAAACTTAGAATTTCTACTCTAGTCATGCAATTAAACAAGGCAAGTCTTAGGCCAAATCCTCTCTCCCGAGTTAGATTCAACACTTAAAACATTCAATTAGTGATCAAGTAATTGAAAGCATTACACAAAATTGCATGCATAAAATAAAAGCACATTCATACCAAAAATCAATCCAACAACTAAAACAACTACATCAATCCCTAAGACAAACAACTAGAAATTCATAGTCTTTAAACCACAAACACTAATTGCAAGAAAAGCCATAAAAACTATAAGAGTTAAGGGAAAGAGAAAGGAAAACTCGAATCCGTCGAAACCGGCACGTCCCCGTCACGATCTCCACGTCTTCTCACTTGATTCCCGCTCCTTGGCCTTGCTTTAGCTCCCACCAAAGGTCTCTAGTCGAAACTAGGGCTAAAATCTAACCAATTGGACTCCTCCAATCCGTAGCACAAAAAGAAGAATTTATAGAAAATCTGCCGATAGCGCCGCGACGCTGTGCCTTTGCCGCGTATTCTGAATAAGGAAAACCTGACAGCGTCTCGACGCTCTTGTCACAGCGTCTCGACGCTGTGACCTCTGCAGCCCAACTCGATTAAGGAATCAGCTAGCGTCGAGACGCCACAAGGCTAGCGTCGATACGCTAGCTCTCGGCCAAGCCCACTTGGAGAAGCTTCCAACATGATTCTTTTCGGCTCCTTAGCTTCTTTTGGCATCCCAAACACCCGATTAACTCCAATTTCACGTTTTAGCTCCAATAAACCAATTTCTACAAAATAAACATTAAAGTGCATTAAAATGGCCACAAATTACTCAAAGACTAACTAAAATGTACTGGGAAACATAGCTCGCTATGCGCGCTATCACAGAAGTACAATCGAATTCTTATGGGATGGATTTATTCCTTTCTCAATGAGGACAAGCTTGGAGAGATTATTGGCTGCTCTTCAGTCTACGAGATTTGGGAGCATCTTCGGACAGTCTACGAATCATCTTCCACAGCGAGGATTATGGCTCTTCGGTCTCAACTCCAGAAAATTTGCAAGGATGCCTCACTGTTACTCAGTATCTCTCTCAAATCAAGGATATCGCCGACAAATTCTCTGCGAGCCGTTGTCTTACCGAGATCATCTCGCCTATATTCTGGAAGGTTTGGGAACAGAATATAATCCATTTGTCACCCAAAAAAGAACCCACCCACGTTGTGAGATTCGAAAGCAGCTACGCGAGCTAGAGTGTGAGCGATGCGATTCTGCTCATGAGAGCAGTGCTTGAACACTGAGCTATCCAGCTTCGGAGCCAAAGCAACTATGGCTTCCAAAATATTTTTGATTTCCGAGTGATCCTCCGCCTTGCCACTGATGCAGTCGATCACTTGCAAAGCGTCGGACTCAATAACCAGGTTTAGATTCTTTCAATAGTTTCCATGTATGCATTTCAGCGGATTCTAAAGATGAAATCATTTGGAAATTTGACAAAAGAGGTCTTTTCTCCGTTAAAAGCGCTTATCAGATAGCGTTAACCATCAAAGATAGGGATGAACCCTCCTCTTCGGATCCTTCTAGCCAATCTCGCCTTTGGAAATCTATATGGAAGCTCGAGATCCCCCCTAGAGCCAAACTTTGCAGCTGGAAAATTATAAAGAATGTCATTCCTACTAAGGACAATATTCAATCTAAAAGTGTTGATGCTCCTAATTTTTGTGGTTTTTGCAGGAAATTTAGGGAAACTACGGTGCACGTGATCTGGGAGTGCAAAGAGGTAAGGAAAATCTGGCATCTCTATCTTCCTAGTTCTGAAGCTCTATTCTCTTTCAACAGGAATGGATGGTCCAGCAAGGATTACTGGGGATGGTGGATGGACAAATCTAGGCCGGAGGACCTGTGTTCGGTAGTAATAATCATGTGGCAAATATGGAACGAAAGGAATCAGAGACTTAACGCATCTGGGAATTATCACAGCAGTCAGATTCTCATTCAAATTGACAACCAATTAGGGCAGCTGAAAAGGAATACAGAGAAGTACCAGGTTGGTCCCAATTCGGCTCTGGCAGAGAGCCTTCCGAGTCCCCCCAAATGGTCTCCACCGCCGGTCATTTTCTAG ATGGCGTCTTCTTCAAGTCTTTCTTCCGCTGCTGACGACCGATTACCGGTCTTGTCCTCGTCAACCACTAATCCTGTCACTACTCCTATTCCCTCTCAGCGTAATAATCCAAATGTTTCCACCCCGTTATCTACTGGTTTTCCCCGAACCCTCAACCCTAATGTCCCTCTGTTTACCACTGCGGATTCTAAAGATGAAATCATTTGGAAATTTGACAAAAGAGGTCTTTTCTCCGTTAAAAGCGCTTATCAGATAGCGTTAACCATCAAAGATAGGGATGAACCCTCCTCTTCGGATCCTTCTAGCCAATCTCGCCTTTGGAAATCTATATGGAAGCTCGAGATCCCCCCTAGAGCCAAACTTTGCAGCTGGAAAATTATAAAGAATGTCATTCCTACTAAGGACAATATTCAATCTAAAAGTGTTGATGCTCCTAATTTTTGTGGTTTTTGCAGGAAATTTAGGGAAACTACGGTGCACGTGATCTGGGAGTGCAAAGAGGTAAGGAAAATCTGGCATCTCTATCTTCCTAGTTCTGAAGCTCTATTCTCTTTCAACAGGAATGGATGGTCCAGCAAGGATTACTGGGGATGGTGGATGGACAAATCTAGGCCGGAGGACCTGTGTTCGGTAGTAATAATCATGTGGCAAATATGGAACGAAAGGAATCAGAGACTTAACGCATCTGGGAATTATCACAGCAGTCAGATTCTCATTCAAATTGACAACCAATTAGGGCAGCTGAAAAGGAATACAGAGAAGTACCAGGTTGGTCCCAATTCGGCTCTGGCAGAGAGCCTTCCGAGTCCCCCCAAATGGTCTCCACCGCCGGTCATTTTCTAG ATGGCGTCTTCTTCAAGTCTTTCTTCCGCTGCTGACGACCGATTACCGGTCTTGTCCTCGTCAACCACTAATCCTGTCACTACTCCTATTCCCTCTCAGCGTAATAATCCAAATGTTTCCACCCCGTTATCTACTGGTTTTCCCCGAACCCTCAACCCTAATGTCCCTCTGTTTACCACTGCGGATTCTAAAGATGAAATCATTTGGAAATTTGACAAAAGAGGTCTTTTCTCCGTTAAAAGCGCTTATCAGATAGCGTTAACCATCAAAGATAGGGATGAACCCTCCTCTTCGGATCCTTCTAGCCAATCTCGCCTTTGGAAATCTATATGGAAGCTCGAGATCCCCCCTAGAGCCAAACTTTGCAGCTGGAAAATTATAAAGAATGTCATTCCTACTAAGGACAATATTCAATCTAAAAGTGTTGATGCTCCTAATTTTTGTGGTTTTTGCAGGAAATTTAGGGAAACTACGGTGCACGTGATCTGGGAGTGCAAAGAGGTAAGGAAAATCTGGCATCTCTATCTTCCTAGTTCTGAAGCTCTATTCTCTTTCAACAGGAATGGATGGTCCAGCAAGGATTACTGGGGATGGTGGATGGACAAATCTAGGCCGGAGGACCTGTGTTCGGTAGTAATAATCATGTGGCAAATATGGAACGAAAGGAATCAGAGACTTAACGCATCTGGGAATTATCACAGCAGTCAGATTCTCATTCAAATTGACAACCAATTAGGGCAGCTGAAAAGGAATACAGAGAAGTACCAGGTTGGTCCCAATTCGGCTCTGGCAGAGAGCCTTCCGAGTCCCCCCAAATGGTCTCCACCGCCGGTCATTTTCTAG MASSSSLSSAADDRLPVLSSSTTNPVTTPIPSQRNNPNVSTPLSTGFPRTLNPNVPLFTTADSKDEIIWKFDKRGLFSVKSAYQIALTIKDRDEPSSSDPSSQSRLWKSIWKLEIPPRAKLCSWKIIKNVIPTKDNIQSKSVDAPNFCGFCRKFRETTVHVIWECKEVRKIWHLYLPSSEALFSFNRNGWSSKDYWGWWMDKSRPEDLCSVVIIMWQIWNERNQRLNASGNYHSSQILIQIDNQLGQLKRNTEKYQVGPNSALAESLPSPPKWSPPPVIF Homology
BLAST of Lcy10g008280 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 1.1e-12 Identity = 47/188 (25.00%), Postives = 81/188 (43.09%), Query Frame = 0
BLAST of Lcy10g008280 vs. ExPASy TrEMBL
Match: A0A2P6QWT3 (Putative ribonuclease H-like domain, reverse transcriptase zinc-binding domain-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4g0415961 PE=4 SV=1) HSP 1 Score: 126.3 bits (316), Expect = 2.0e-25 Identity = 65/210 (30.95%), Postives = 111/210 (52.86%), Query Frame = 0
BLAST of Lcy10g008280 vs. ExPASy TrEMBL
Match: A0A7N2LVY0 (zf-RVT domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 3.7e-24 Identity = 56/161 (34.78%), Postives = 86/161 (53.42%), Query Frame = 0
BLAST of Lcy10g008280 vs. ExPASy TrEMBL
Match: A0A7N2LFZ6 (zf-RVT domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 8.3e-24 Identity = 62/195 (31.79%), Postives = 92/195 (47.18%), Query Frame = 0
BLAST of Lcy10g008280 vs. ExPASy TrEMBL
Match: A0A2N9IWN7 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS56441 PE=4 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 2.7e-22 Identity = 60/170 (35.29%), Postives = 86/170 (50.59%), Query Frame = 0
BLAST of Lcy10g008280 vs. ExPASy TrEMBL
Match: A0A7J6F936 (CCHC-type domain-containing protein OS=Cannabis sativa OX=3483 GN=F8388_006510 PE=4 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 3.5e-22 Identity = 67/218 (30.73%), Postives = 108/218 (49.54%), Query Frame = 0
BLAST of Lcy10g008280 vs. NCBI nr
Match: PRQ38614.1 (putative ribonuclease H-like domain, reverse transcriptase zinc-binding domain-containing protein [Rosa chinensis]) HSP 1 Score: 126.3 bits (316), Expect = 4.1e-25 Identity = 65/210 (30.95%), Postives = 111/210 (52.86%), Query Frame = 0
BLAST of Lcy10g008280 vs. NCBI nr
Match: XP_023908235.1 (uncharacterized protein LOC112019924 [Quercus suber]) HSP 1 Score: 121.3 bits (303), Expect = 1.3e-23 Identity = 63/199 (31.66%), Postives = 103/199 (51.76%), Query Frame = 0
BLAST of Lcy10g008280 vs. NCBI nr
Match: XP_006491472.1 (uncharacterized protein LOC102626455 [Citrus sinensis]) HSP 1 Score: 118.6 bits (296), Expect = 8.5e-23 Identity = 69/221 (31.22%), Postives = 114/221 (51.58%), Query Frame = 0
BLAST of Lcy10g008280 vs. NCBI nr
Match: XP_042974832.1 (uncharacterized protein LOC122306468 [Carya illinoinensis]) HSP 1 Score: 118.2 bits (295), Expect = 1.1e-22 Identity = 69/224 (30.80%), Postives = 102/224 (45.54%), Query Frame = 0
BLAST of Lcy10g008280 vs. NCBI nr
Match: XP_042988705.1 (uncharacterized protein LOC122316240 [Carya illinoinensis]) HSP 1 Score: 116.3 bits (290), Expect = 4.2e-22 Identity = 77/261 (29.50%), Postives = 114/261 (43.68%), Query Frame = 0
BLAST of Lcy10g008280 vs. TAIR 10
Match: AT4G04650.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein ) HSP 1 Score: 64.7 bits (156), Expect = 1.4e-10 Identity = 58/242 (23.97%), Postives = 103/242 (42.56%), Query Frame = 0
BLAST of Lcy10g008280 vs. TAIR 10
Match: AT3G25270.1 (Ribonuclease H-like superfamily protein ) HSP 1 Score: 58.9 bits (141), Expect = 7.4e-09 Identity = 41/190 (21.58%), Postives = 78/190 (41.05%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
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