Lcy10g008160 (gene) Sponge gourd (P93075) v1

Overview
NameLcy10g008160
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionRibonuclease H-like superfamily protein
LocationChr10: 33490752 .. 33491565 (-)
RNA-Seq ExpressionLcy10g008160
SyntenyLcy10g008160
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGCTGGCATCGCCTGTGCAAAAGTAAAGCTCGAGGAAGAATGAGCTTCAGGGATATATGCCTGTTTAATAAAGCCATGCTTGCGAAACAAAGCTGGAAGATCCTGAAAAACTCTGATTACCTTCTCTCCAGGATCCTAAGGGGTAGATATTTCAAGAACGGAGACTTTATTAATGCCTATGCAGGCCATAATCCCTCCCTAACTTGGCGAAGCATATTATGGGGGAGGGATCTTTTCCTTCAAGATTATAGATGGAGAGTTGGGAACAGAAAATACATCCCCATCCATAATGCACCATGGATCAATAGAGAAGGTTGCAAAACGGTCTTGTGCCCCCCCCCCCCCCCCCGGGAGCTAAGAAACAACAACGTTTGCAGCCTTATTGGAGAGGATGGTTGCTAGAAGGAAAAGGGAGATAAGAAACAAATTTATACCCCTTGATGCAAACAATATTCTGAACATTCCCCTAGGATCCAACTCCTCAGTAGACGAGATTATATGGGCAGAGAGTCCTGAAGGCATTTTCTCGGTTAAGTCAGCCTATCATCTTCCTGTGAACATTGCTGAGTCCAAGGAGTCTACAAGCTCGAATGCTAAAGATGGCCCTACTCTATGGGAGAGGCTGTGGAAGATCAATATCATGCCCAGAATAAAAATCTGTGTGTGGAGGGTCTTAAACAATCTCATCCTATCGAAGGCAAACCTTATTGCTAAAGGGATTGAAATTAACCCTCTCTGTGTTTTATGTAGGAAAAGAGAAGAGTCCACTTCTCACCTAATTTGGGGTTGTAAGTTCACTAAGGAGCTTTGA

mRNA sequence

ATGAGCTGGCATCGCCTGTGCAAAAGTAAAGCTCGAGGAAGAATGAGCTTCAGGGATATATGCCTGTTTAATAAAGCCATGCTTGCGAAACAAAGCTGGAAGATCCTGAAAAACTCTGATTACCTTCTCTCCAGGATCCTAAGGGGTAGATATTTCAAGAACGGAGACTTTATTAATGCCTATGCAGGCCATAATCCCTCCCTAACTTGGCGAAGCATATTATGGGGGAGGGATCTTTTCCTTCAAGATTATAGATGGAGAGTTGGGAACAGAAAATACATCCCCATCCATAATGCACCATGGATCAATAGAGAAGGATCCAACTCCTCAGTAGACGAGATTATATGGGCAGAGAGTCCTGAAGGCATTTTCTCGGTTAAGTCAGCCTATCATCTTCCTGTGAACATTGCTGAGTCCAAGGAGTCTACAAGCTCGAATGCTAAAGATGGCCCTACTCTATGGGAGAGGCTGTGGAAGATCAATATCATGCCCAGAATAAAAATCTGTGTGTGGAGGGTCTTAAACAATCTCATCCTATCGAAGGCAAACCTTATTGCTAAAGGGATTGAAATTAACCCTCTCTGTGTTTTATGTAGGAAAAGAGAAGAGTCCACTTCTCACCTAATTTGGGGTTGTAAGTTCACTAAGGAGCTTTGA

Coding sequence (CDS)

ATGAGCTGGCATCGCCTGTGCAAAAGTAAAGCTCGAGGAAGAATGAGCTTCAGGGATATATGCCTGTTTAATAAAGCCATGCTTGCGAAACAAAGCTGGAAGATCCTGAAAAACTCTGATTACCTTCTCTCCAGGATCCTAAGGGGTAGATATTTCAAGAACGGAGACTTTATTAATGCCTATGCAGGCCATAATCCCTCCCTAACTTGGCGAAGCATATTATGGGGGAGGGATCTTTTCCTTCAAGATTATAGATGGAGAGTTGGGAACAGAAAATACATCCCCATCCATAATGCACCATGGATCAATAGAGAAGGATCCAACTCCTCAGTAGACGAGATTATATGGGCAGAGAGTCCTGAAGGCATTTTCTCGGTTAAGTCAGCCTATCATCTTCCTGTGAACATTGCTGAGTCCAAGGAGTCTACAAGCTCGAATGCTAAAGATGGCCCTACTCTATGGGAGAGGCTGTGGAAGATCAATATCATGCCCAGAATAAAAATCTGTGTGTGGAGGGTCTTAAACAATCTCATCCTATCGAAGGCAAACCTTATTGCTAAAGGGATTGAAATTAACCCTCTCTGTGTTTTATGTAGGAAAAGAGAAGAGTCCACTTCTCACCTAATTTGGGGTTGTAAGTTCACTAAGGAGCTTTGA

Protein sequence

MSWHRLCKSKARGRMSFRDICLFNKAMLAKQSWKILKNSDYLLSRILRGRYFKNGDFINAYAGHNPSLTWRSILWGRDLFLQDYRWRVGNRKYIPIHNAPWINREGSNSSVDEIIWAESPEGIFSVKSAYHLPVNIAESKESTSSNAKDGPTLWERLWKINIMPRIKICVWRVLNNLILSKANLIAKGIEINPLCVLCRKREESTSHLIWGCKFTKEL
Homology
BLAST of Lcy10g008160 vs. ExPASy Swiss-Prot
Match: P93295 (Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 GN=AtMg00310 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.1e-15
Identity = 43/105 (40.95%), Postives = 63/105 (60.00%), Query Frame = 0

Query: 1   MSWHRLCKSKA-RGRMSFRDICLFNKAMLAKQSWKILKNSDYLLSRILRGRYFKNGDFIN 60
           ++W +LCKSK   G + FRD+  FN+A+LAKQS++I+     LLSR+LR RYF +   + 
Sbjct: 42  VAWQKLCKSKEDDGGLGFRDLGWFNQALLAKQSFRIIHQPHTLLSRLLRSRYFPHSSMME 101

Query: 61  AYAGHNPSLTWRSILWGRDLFLQDYRWRVGNRKYIPIHNAPWINR 105
              G  PS  WRSI+ GR+L  +     +G+     IH   W++R
Sbjct: 102 CSVGTRPSYAWRSIIHGRELLSRGLLRTIGD----GIHTKVWLDR 142

BLAST of Lcy10g008160 vs. ExPASy TrEMBL
Match: A0A803P119 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 2.0e-41
Identity = 88/235 (37.45%), Postives = 130/235 (55.32%), Query Frame = 0

Query: 2    SWHRLCKSKARGRMSFRDICLFNKAMLAKQSWKILKNSDYLLSRILRGRYFKNGDFINAY 61
            +W+ LC+SK  G + FR+   FN+A+LAKQ+W+++ N+D LL R L  RYF    F+ A 
Sbjct: 1407 NWNALCRSKLEGGLGFRNFIDFNQALLAKQAWRLVDNNDSLLYRTLYHRYFSRSTFLQAR 1466

Query: 62   AGHNPSLTWRSILWGRDLFLQDYRWRVGNRKYIPIHNAPWINREGSNSSV---------- 121
             GHNPS TWRSILWGRDL+++   W+VG    I   + PW+    + + V          
Sbjct: 1467 LGHNPSYTWRSILWGRDLWVKGLCWKVGTGSSISCASDPWLPGTTNFAPVLCMDANNDLR 1526

Query: 122  --------DEIIWAESPEGIFSVKSAYHLPVNIAESKESTSSNAKDGPTLWERLWKINIM 181
                     ++IW  SP G ++VKS YHL  NI + +  +SSN       W   W +N+ 
Sbjct: 1527 VSDLITADHKLIWQHSPHGCYNVKSGYHLATNIRDQESPSSSNL--NTKWWSHFWHLNLP 1586

Query: 182  PRIKICVWRVLNNLILSKANLIAKGIEINPLCVLCRKREESTSHLIWGCKFTKEL 219
             ++KI  WRV++N++   ANL  + I  +P C  C    ES +H  + CK  K++
Sbjct: 1587 CKVKIFAWRVIHNVLPLAANLFKRHIAPDPKCSRCNYHNESLNHAFFLCKKAKQV 1639

BLAST of Lcy10g008160 vs. ExPASy TrEMBL
Match: A0A803NTN0 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 3.2e-39
Identity = 93/264 (35.23%), Postives = 134/264 (50.76%), Query Frame = 0

Query: 3   WHRLCKSKARGRMSFRDICLFNKAMLAKQSWKILKNSDYLLSRILRGRYFKNGDFINAYA 62
           W  LCKSK  G M FR    FN+A+LAKQ+W+I    + LLSR+L+ RYF N  F++A+ 
Sbjct: 554 WKALCKSKHEGGMGFRSFVHFNQALLAKQAWRIFDMPNSLLSRLLKHRYFSNNSFLDAHI 613

Query: 63  GHNPSLTWRSILWGRDLFLQDYRWRVGNRKYIPIHNAPWI---------NREGSNS---- 122
           GH+PS TW+SI WGRDL ++  R++VGN   I     PWI         + +GS+S    
Sbjct: 614 GHSPSYTWQSICWGRDLLVKGVRFKVGNGTNIACAIDPWIPSHTNFKPVSFQGSSSLSVS 673

Query: 123 -----------------------------------SVDEIIWAESPEGIFSVKSAYHLPV 182
                                                D +IW  S  GI++VKS +HL  
Sbjct: 674 TFITDQREWNIDLLNSYFQPIDVEKILTIPLSFFADQDRLIWHHSSSGIYNVKSGFHLAT 733

Query: 183 NIAESKESTSSNAKDGPTLWERLWKINIMPRIKICVWRVLNNLILSKANLIAKGIEINPL 219
            + E  +S++S+   G   W+  W +N+ P+I+I  W+VLNN++   A L  K I  +  
Sbjct: 734 ALEEQNDSSTSDPNRG--WWKYFWNLNLPPKIRIFAWKVLNNVLPVAAALFKKKIIDSAA 793

BLAST of Lcy10g008160 vs. ExPASy TrEMBL
Match: A0A803PPP4 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 2.3e-37
Identity = 80/263 (30.42%), Postives = 135/263 (51.33%), Query Frame = 0

Query: 2   SWHRLCKSKARGRMSFRDICLFNKAMLAKQSWKILKNSDYLLSRILRGRYFKNGDFINAY 61
           +WH LCKSK  G M FR    FN+A+LAKQ+W++L+  D L  ++L+ RYF + DF++A 
Sbjct: 304 AWHLLCKSKIDGGMGFRSFEQFNQALLAKQAWRLLEKLDSLRGKLLKSRYFPHNDFLHAP 363

Query: 62  AGHNPSLTWRSILWGRDLFLQDYRWRVGNRKYIPIHNAPWINREG----------SNSSV 121
            GH+PSLTW+ I+WGR+L L+   W++G  + I +   PWI              +N+ V
Sbjct: 364 HGHSPSLTWQGIVWGRELLLKGLHWKIGEGRLIRVALDPWIPSRDTFTPTLFSSHANAMV 423

Query: 122 --------------------------------------DEIIWAESPEGIFSVKSAYHLP 181
                                                 D ++W  +  G ++V+S YHL 
Sbjct: 424 SHLITDERVWNVPLLEQWFSPLDVDRILTMTLSFLQHSDALVWHYTTSGAYTVQSGYHLA 483

Query: 182 VNIAESKESTSSNAKDGPTLWERLWKINIMPRIKICVWRVLNNLILSKANLIAKGIEINP 217
            +IA++  +  S++    + W+  W + +  ++KI  WRV++N +    +L+ + I  + 
Sbjct: 484 TSIADTSANNCSSSVSQASWWKYFWSLQLPQKVKIFAWRVIHNALPVVTSLVRRKIITDS 543

BLAST of Lcy10g008160 vs. ExPASy TrEMBL
Match: A0A803QHU6 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 3.0e-37
Identity = 91/265 (34.34%), Postives = 136/265 (51.32%), Query Frame = 0

Query: 3   WHRLCKSKARGRMSFRDICLFNKAMLAKQSWKILKNSDYLLSRILRGRYFKNGDFINAYA 62
           W  LCKSK  G M FR    FN+A+LAKQ+W+I    D LLSR+L+ R+F N  F++A  
Sbjct: 721 WKSLCKSKHEGGMGFRSFVHFNQALLAKQAWRIFYMPDSLLSRLLKHRFFSNSTFLDANI 780

Query: 63  GHNPSLTWRSILWGRDLFLQDYRWRVGNRKYIPIHNAPWI---------NREGSNS---- 122
           GH+PSLTW+SI WG++L ++  R++VGN   I     PWI         +  GS S    
Sbjct: 781 GHSPSLTWQSICWGKELLVKGLRFKVGNGTQIDSKLDPWIQGFNEFKPVSYLGSTSLPVS 840

Query: 123 -----------------------------------SVDEIIWAESPEGIFSVKSAYHLPV 182
                                               +D +IW  +  G+++V+S +HL  
Sbjct: 841 SFITEERIWNVPMLNTYFHPIDSDRILTIPLSFFPDMDRLIWHFTSNGLYTVQSGFHLAS 900

Query: 183 NIAESK-ESTSSNAKDGPTLWERLWKINIMPRIKICVWRVLNNLILSKANLIAKGIEINP 219
           ++ E    STS+N +D    W+  W +N+ P+I+I VW+VL+N++ + A L  K +  + 
Sbjct: 901 SLEEQHCSSTSNNQRD---WWKYFWNLNLPPKIRIFVWKVLHNILPTAAALFKKKVLTSA 960

BLAST of Lcy10g008160 vs. ExPASy TrEMBL
Match: A0A7N2LKM6 (zf-RVT domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 6.6e-37
Identity = 80/264 (30.30%), Postives = 135/264 (51.14%), Query Frame = 0

Query: 1   MSWHRLCKSKARGRMSFRDICLFNKAMLAKQSWKILKNSDYLLSRILRGRYFKNGDFINA 60
           + W +LC SK RG M FRDI  FN AMLAKQ+W++++    L  R+ + RYF    F+ A
Sbjct: 109 IKWGKLCNSKDRGGMGFRDIHAFNLAMLAKQAWRLIQGGHSLFFRVYKTRYFPTCSFMEA 168

Query: 61  YAGHNPSLTWRSILWGRDLFLQDYRWRVGNRKYIPIHNAPWI----------NRE----- 120
             G NPS  WRS+L  RDL      W+VG+ K I + +  W+          NR      
Sbjct: 169 GLGSNPSYVWRSLLEARDLITAATVWKVGDGKSIKLEDHRWLPHPPKFQPNANRSLRVSD 228

Query: 121 -------------------------------GSNSSVDEIIWAESPEGIFSVKSAYHLPV 180
                                           +  S DE++W E+ +G FSVK+AY + +
Sbjct: 229 LFDPCTKQWHTHVLHTNFMQSTVEDIQRVDLRNTHSKDELLWRENKKGTFSVKTAYQVAI 288

Query: 181 NIAESKESTSSNAKDGPTLWERLWKINIMPRIKICVWRVLNNLILSKANLIAKGIEINPL 219
              + ++  SS+ +D   +W  LW+++I P+++  VWR  ++++ ++ NL  + + ++P+
Sbjct: 289 RQQQQEKGESSSTRDVRRMWNCLWQLHIPPKVRNFVWRACSDILPTRTNLCRRKVPLDPV 348

BLAST of Lcy10g008160 vs. NCBI nr
Match: XP_030494705.1 (uncharacterized protein LOC115710484 [Cannabis sativa])

HSP 1 Score: 171.8 bits (434), Expect = 6.6e-39
Identity = 83/225 (36.89%), Postives = 125/225 (55.56%), Query Frame = 0

Query: 2   SWHRLCKSKARGRMSFRDICLFNKAMLAKQSWKILKNSDYLLSRILRGRYFKNGDFINAY 61
           SW  LC SK  G + FR+  L N+A+LAKQ+W+I  N + L+SR+L+ RYFKN DF+ A 
Sbjct: 190 SWPSLCVSKFHGGLGFRNFVLHNQALLAKQAWRIFTNPNSLVSRLLKARYFKNNDFLTAS 249

Query: 62  AGHNPSLTWRSILWGRDLFLQDYRWRVGNRKYIPIHNAPWINREG------SNSSVDEII 121
            GH PS +W SILWGRDL  Q   W++GN K +      W+            S  D +I
Sbjct: 250 KGHTPSYSWSSILWGRDLLYQGLIWKIGNGKSVSTLQHYWVPVTAILTIPIDPSQDDTLI 309

Query: 122 WAESPEGIFSVKSAYHLPVNIAESKES--TSSNAKDGPTLWERLWKINIMPRIKICVWRV 181
           W+  P G  +V +AYHL  + A    S  +SSN       W+ LW + + P+IK  +WR 
Sbjct: 310 WSSHPSGNLTVNTAYHLASSRASFNVSAPSSSNLDQSKKWWKTLWHLPVPPKIKHFIWRT 369

Query: 182 LNNLILSKANLIAKGIEINPLCVLCRKREESTSHLIWGCKFTKEL 219
            ++++ + +NL ++ I  +P C  C    ++  H + GC   +++
Sbjct: 370 YHHILPTSSNLFSRNIIPSPNCSFCSSDLDTVIHALLGCSRARKI 414

BLAST of Lcy10g008160 vs. NCBI nr
Match: XP_030478973.1 (uncharacterized protein LOC115696051 [Cannabis sativa])

HSP 1 Score: 171.0 bits (432), Expect = 1.1e-38
Identity = 88/234 (37.61%), Postives = 127/234 (54.27%), Query Frame = 0

Query: 2    SWHRLCKSKARGRMSFRDICLFNKAMLAKQSWKILKNSDYLLSRILRGRYFKNGDFINAY 61
            SW +LC+SK+ G + FR +  FN+AMLAKQ+WKI K  D LL R+L+ RYF N   + A 
Sbjct: 1172 SWKKLCQSKSMGGLGFRSLIHFNQAMLAKQAWKIFKQPDSLLGRVLKARYFPNSSLLEAI 1231

Query: 62   AGHNPSLTWRSILWGRDLFLQDYRWRVGNRKYIPIHNAPWINREG--------------- 121
             GHNPS  WRSILWGRDL      W++G+ K I      W+                   
Sbjct: 1232 PGHNPSYAWRSILWGRDLMALGLIWKIGDGKNILTIGDHWLPNNKYLCYKDDHVPPSPKL 1291

Query: 122  ---SNSSVDEIIWAESPEGIFSVKSAYHLPVNIAESKESTSSNAKDGPTLWERLWKINIM 181
                + S  E+IW+ +  G+F+VKSAYHL ++  +   STSS+  +    W ++W     
Sbjct: 1292 SFFISDSGYELIWSRAGSGLFTVKSAYHLALSY-QDIPSTSSDT-NSRKFWNKVWYSKAP 1351

Query: 182  PRIKICVWRVLNNLILSKANLIAKGIEINPLCVLCRKREESTSHLIWGCKFTKE 218
            P+IK  +WRV+ + I   ++L +  I  +PLC  C+   E+  H + GC   K+
Sbjct: 1352 PKIKHFIWRVVTHTIPVASSLFSHHIIDSPLCSFCKSNSETVQHALLGCSRLKK 1403

BLAST of Lcy10g008160 vs. NCBI nr
Match: XP_030502765.1 (uncharacterized protein LOC115717936 [Cannabis sativa])

HSP 1 Score: 168.7 bits (426), Expect = 5.6e-38
Identity = 89/264 (33.71%), Postives = 138/264 (52.27%), Query Frame = 0

Query: 2    SWHRLCKSKARGRMSFRDICLFNKAMLAKQSWKILKNSDYLLSRILRGRYFKNGDFINAY 61
            +W+ LCK+K +G + FR+   FN+A+LAKQ+W+I++  + LLS++LR RYF NG+FI++ 
Sbjct: 742  NWNFLCKAKVQGGLGFRNFIHFNQALLAKQAWRIIEFPNSLLSKLLRHRYFSNGNFISSG 801

Query: 62   AGHNPSLTWRSILWGRDLFLQDYRWRVGNRKYIPIHNAPW-------------------- 121
             G NPSLTWRS+ WG++L L+  RWRVG+   I      W                    
Sbjct: 802  LGSNPSLTWRSLFWGKELLLKGLRWRVGSGLTINCATDAWMPGNTTFKPYFFKGADPNLM 861

Query: 122  ---------------INREGSNSSVDEI--------------IWAESPEGIFSVKSAYHL 181
                           +    S + VD I              IW+ S  GI++VKS Y L
Sbjct: 862  VADLISEQRQWDLISLQANFSQADVDRILSIPLSLFPHDDVLIWSHSFTGIYNVKSGYQL 921

Query: 182  PVNIAESKESTSSNAKDGPTLWERLWKINIMPRIKICVWRVLNNLILSKANLIAKGIEIN 217
             V++AE  ++ SS++ +    W   WK+ I P+++I VW+V ++ +   A L  + I  +
Sbjct: 922  AVSLAEQDDTASSSSME--HWWSTFWKVKIPPKVRIFVWKVFHSTLPVAAELYRRHIATS 981

BLAST of Lcy10g008160 vs. NCBI nr
Match: XP_030508852.1 (uncharacterized protein LOC115723496 [Cannabis sativa])

HSP 1 Score: 167.2 bits (422), Expect = 1.6e-37
Identity = 87/264 (32.95%), Postives = 137/264 (51.89%), Query Frame = 0

Query: 2    SWHRLCKSKARGRMSFRDICLFNKAMLAKQSWKILKNSDYLLSRILRGRYFKNGDFINAY 61
            +W+ LCK+K +G + FR+   FN+A+LAKQ+W+IL+  + LLS +LR RYF NG+++ A 
Sbjct: 853  NWNFLCKAKVQGGLGFRNFIHFNQALLAKQAWRILEFPNSLLSNLLRHRYFSNGNYLIAG 912

Query: 62   AGHNPSLTWRSILWGRDLFLQDYRWRVGNRKYIPIHNAPWI------------------- 121
             G NPSLTWRS++WG++L L+  RWRVG+ + I      W+                   
Sbjct: 913  LGSNPSLTWRSLVWGKELLLKGLRWRVGSGERINCKTDSWLPGHTTFKPYFFKGPDPNLL 972

Query: 122  --------------------NREGSNSSV----------DEIIWAESPEGIFSVKSAYHL 181
                                N+   N  +          D +IW +S  G+++VKS YH 
Sbjct: 973  VADLITEHRTWDMISLETNFNQADINRVLSIPLSPYPHDDVLIWNQSFTGVYNVKSGYHF 1032

Query: 182  PVNIAESKESTSSNAKDGPTLWERLWKINIMPRIKICVWRVLNNLILSKANLIAKGIEIN 217
             V++AE  +ST SN+ +    W   WK+ + P+++I VW+V +  +   A L  + I  +
Sbjct: 1033 AVSLAEQDDSTCSNSIE--HWWSNFWKLKLPPKVRIFVWKVFHTSLPVAAELYRRHIAFS 1092

BLAST of Lcy10g008160 vs. NCBI nr
Match: XP_024035599.1 (uncharacterized protein LOC112096407 [Citrus clementina])

HSP 1 Score: 166.0 bits (419), Expect = 3.6e-37
Identity = 85/265 (32.08%), Postives = 134/265 (50.57%), Query Frame = 0

Query: 3   WHRLCKSKARGRMSFRDICLFNKAMLAKQSWKILKNSDYLLSRILRGRYFKNGDFINAYA 62
           W +L  +K RG + FRD+  FN+A+LAKQ W++L+N + L++++++ RY+KN DF+NA  
Sbjct: 569 WEKLSYAKIRGGLGFRDVSCFNQALLAKQGWRLLQNPESLVAKVIKARYYKNTDFLNAKV 628

Query: 63  GHNPSLTWRSILWGRDLFLQDYRWRVGNRKYIPIHNAPWI-------------------- 122
           G +PS  WRSILWGR +  +  RWR+GN + I I  + WI                    
Sbjct: 629 GSSPSFIWRSILWGRQVLQKGTRWRIGNGEKIQIQASNWIPRPTTFKLIVEPSLPTGAKV 688

Query: 123 ------NREGSNSSV-----------------------DEIIWAESPEGIFSVKSAYHLP 182
                 N++ + S +                       DEIIW    +G++SVKS Y L 
Sbjct: 689 SELILPNQQWNESMINQSFARMDADIIKSILLPRTPQEDEIIWHYDRKGLYSVKSGYQLA 748

Query: 183 VNIAESKESTSSNAKDGPTLWERLWKINIMPRIKICVWRVLNNLILSKANLIAKGIEINP 219
           + I   +  TSS        W+ LWK+N+  +IKI VW+     + +  NL  + I   P
Sbjct: 749 LKIKFPEPPTSSAGASQE--WQNLWKLNLPGKIKIFVWKAAKTFLPTAENLWRRKILQEP 808

BLAST of Lcy10g008160 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 100.9 bits (250), Expect = 1.3e-21
Identity = 63/274 (22.99%), Postives = 111/274 (40.51%), Query Frame = 0

Query: 2   SWHRLCKSKARGRMSFRDICLFNKAMLAKQSWKILKNSDYLLSRILRGRYFKNGDFINAY 61
           +W  L   KA G + F+DI  FN A+L KQ W++L   + L++++ + RYF   D +NA 
Sbjct: 43  AWDHLSCYKAEGGIGFKDIEAFNLALLGKQMWRMLSRPESLMAKVFKSRYFHKSDPLNAP 102

Query: 62  AGHNPSLTWRSILWGRDLFLQDYRWRVGNRKYIPIHNAPWIN------------------ 121
            G  PS  W+SI   +++  Q  R  VGN + I I    W++                  
Sbjct: 103 LGSRPSFVWKSIHASQEILRQGARAVVGNGEDIIIWRHKWLDSKPASAALRMQRVPPQEY 162

Query: 122 ----------------------------------------REGSNSSVDEIIWAESPEGI 181
                                                   R G    +D   W  +  G 
Sbjct: 163 ASVSSILKVSDLIDESGREWRKDVIEMLFPEVERKLIGELRPGGRRILDSYTWDYTSSGD 222

Query: 182 FSVKSAYHLPVNIAESKESTSSNAKDG-PTLWERLWKINIMPRIKICVWRVLNNLILSKA 217
           ++VKS Y +   I   + S    ++     +++++WK    P+I+  +W+ L+N +    
Sbjct: 223 YTVKSGYWVLTQIINKRSSPQEVSEPSLNPIYQKIWKSQTSPKIQHFLWKCLSNSLPVAG 282

BLAST of Lcy10g008160 vs. TAIR 10
Match: ATMG00310.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 85.1 bits (209), Expect = 7.5e-17
Identity = 43/105 (40.95%), Postives = 63/105 (60.00%), Query Frame = 0

Query: 1   MSWHRLCKSKA-RGRMSFRDICLFNKAMLAKQSWKILKNSDYLLSRILRGRYFKNGDFIN 60
           ++W +LCKSK   G + FRD+  FN+A+LAKQS++I+     LLSR+LR RYF +   + 
Sbjct: 42  VAWQKLCKSKEDDGGLGFRDLGWFNQALLAKQSFRIIHQPHTLLSRLLRSRYFPHSSMME 101

Query: 61  AYAGHNPSLTWRSILWGRDLFLQDYRWRVGNRKYIPIHNAPWINR 105
              G  PS  WRSI+ GR+L  +     +G+     IH   W++R
Sbjct: 102 CSVGTRPSYAWRSIIHGRELLSRGLLRTIGD----GIHTKVWLDR 142

BLAST of Lcy10g008160 vs. TAIR 10
Match: AT3G09510.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 64.7 bits (156), Expect = 1.1e-10
Identity = 30/103 (29.13%), Postives = 53/103 (51.46%), Query Frame = 0

Query: 112 DEIIWAESPEGIFSVKSAYHLPVNIAESKESTSSNAKDGPTLWERLWKINIMPRIKICVW 171
           D+IIW  +  G ++V+S Y L  +   +     +       L  R+W + IMP++K  +W
Sbjct: 117 DKIIWNYNTTGEYTVRSGYWLLTHDPSTNIPAINPPHGSIDLKTRIWNLPIMPKLKHFLW 176

Query: 172 RVLNNLILSKANLIAKGIEINPLCVLCRKREESTSHLIWGCKF 215
           R L+  + +   L  +G+ I+P C  C +  ES +H ++ C F
Sbjct: 177 RALSQALATTERLTTRGMRIDPSCPRCHRENESINHALFTCPF 219

BLAST of Lcy10g008160 vs. TAIR 10
Match: AT3G26855.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 55.1 bits (131), Expect = 8.4e-08
Identity = 22/60 (36.67%), Postives = 36/60 (60.00%), Query Frame = 0

Query: 157 LWKINIMPRIKICVWRVLNNLILSKANLIAKGIEINPLCVLCRKREESTSHLIWGCKFTK 216
           +W + I P+IK+ +W+ LNN +   A L+++ I I P C  CR  E  T H+++ C F +
Sbjct: 9   IWSLKISPKIKLLIWKALNNALPVGAQLLSRNISIEPFCTRCRDFETIT-HILFNCPFAQ 67

BLAST of Lcy10g008160 vs. TAIR 10
Match: AT2G02520.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 41.6 bits (96), Expect = 9.6e-04
Identity = 16/65 (24.62%), Postives = 34/65 (52.31%), Query Frame = 0

Query: 154 WERLWKINIMPRIKICVWRVLNNLILSKANLIAKGIEINPLCVLCRKREESTSHLIWGCK 213
           ++ +W    +P+     W  + + + +K  +I+ G    PLC+ C   +E+  HL + C+
Sbjct: 44  FKAIWFKGKIPKHAFIAWVNMRHRLHTKDRMISWGFIFPPLCLFCNTHDETRQHLFFDCE 103

Query: 214 FTKEL 219
           F +E+
Sbjct: 104 FAREV 108

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
P932951.1e-1540.95Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 ... [more]
Match NameE-valueIdentityDescription
A0A803P1192.0e-4137.45Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A803NTN03.2e-3935.23Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A803PPP42.3e-3730.42Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A803QHU63.0e-3734.34Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A7N2LKM66.6e-3730.30zf-RVT domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
XP_030494705.16.6e-3936.89uncharacterized protein LOC115710484 [Cannabis sativa][more]
XP_030478973.11.1e-3837.61uncharacterized protein LOC115696051 [Cannabis sativa][more]
XP_030502765.15.6e-3833.71uncharacterized protein LOC115717936 [Cannabis sativa][more]
XP_030508852.11.6e-3732.95uncharacterized protein LOC115723496 [Cannabis sativa][more]
XP_024035599.13.6e-3732.08uncharacterized protein LOC112096407 [Citrus clementina][more]
Match NameE-valueIdentityDescription
AT4G29090.11.3e-2122.99Ribonuclease H-like superfamily protein [more]
ATMG00310.17.5e-1740.95RNA-directed DNA polymerase (reverse transcriptase)-related family protein [more]
AT3G09510.11.1e-1029.13Ribonuclease H-like superfamily protein [more]
AT3G26855.18.4e-0836.67RNA-directed DNA polymerase (reverse transcriptase)-related family protein [more]
AT2G02520.19.6e-0424.62RNA-directed DNA polymerase (reverse transcriptase)-related family protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026960Reverse transcriptase zinc-binding domainPFAMPF13966zf-RVTcoord: 124..218
e-value: 7.4E-17
score: 61.8
NoneNo IPR availablePANTHERPTHR33116:SF41SUBFAMILY NOT NAMEDcoord: 1..135
NoneNo IPR availablePANTHERPTHR33116REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATEDcoord: 1..135

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy10g008160.1Lcy10g008160.1mRNA