Lcy10g007000 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy10g007000
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	SNARE associated Golgi protein family
Location	Chr10: 28797945 .. 28801478 (-)
RNA-Seq Expression	Lcy10g007000
Synteny	Lcy10g007000

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCACTCCTCGGTTGTAAAAGAACCTTGTCCCCAAGGTTGAAAGATGGAAATTGCTTCTTGAAGTCATCAACGAACTCCCAAGTAGCTTCATGTTCAGGCAGCCCCTTCCAACTAATCAGCACTTCCTTTCCATTATTTCGAAAAGTGAAGACCTCCACAGGCTCTATAATCCATTCATACTCATCTGACAAGGGGGGAGATTCTGTTTGAACTTCCAGGTGTGGTCCCACAACCCGTTTCAACTGGGAGACGTGAAATACCGGATGGATTGTTGTGGTATTTGGGAGCTTCAATCGATAGGCTACATATCCTATCTTTTCCTCAATTTGATAAGGTCCAAAGAATTTGGGTGATAGCTTTTCATTCCTCTTCCTTGCTAAGGACTGCTGTCTGTATGCTCTGATTTTCAAAAAGACCCAGTCTCCTTCCTCAAAGTGCGCCTCTGTTCTTTTTTGGTCACCAAACTTTTTCATGCGCTCTTGGGCTGCTTGCAAATGGTTCTTCAACATGTTCAAAGTGACGTCCCCGTCAGCCAACTGCTGATCTAGCACTACATTTGAAGTTCTCATCCCTCAATAAGTGAATAATGGGGGTGGAGGTTTGCCATACACAACTTGGAGTTTGGTAGTCAATAAGTCAATAATAGGTCTGTCATAAGTCAATAATGTCGTTTGAGTGGAATTTGGTAGTAGTTGGAGATTGTTTTGCATTGGAGTTTGGCATTGGTATCGTTACACTTATTTTAGATCTTTGTTTTGTTCTTGGATGTCTAATGATGCTGTATGTATTCCTTTTATGAGAGTTGTGATCTTATTATTTTATTAGGTTGATTTGATACAAGATCGACACTCGTGCTTTTATTTGAATTTTTAGAAGTATATGTTAAACTTGTTTATCAGATGTAAGAAAAAATTGGGTGATTATTGTAGTTACACTATTATGTTGTCGAAATTTTCAGGACATTACAGGAAGATGGGAGTTGGATGGGGATGGTGGTCCAAATTAGCCACTATAGTGGCGGCGGTGGCGATTCTTAGAGAATTAGGGAAACGATATGGATGGGAAATTGACAAAGAAGCTGCTCTCAATGTGTTCGGCCAGTGGTCCGATCAACTGGGGATATGGGCCATGCCTGTGTATGTCGGCATCCATACCATCACACTTGCTCTGTGCTTGCCCTACGCTGTGTTCTTTGAAGCCACTGCTTCTTTGCTCTTTGGCTTCTTCCCTGCCGTGATTTGTGTTTTCTCTGCCAAGGTGCTTGGGGCTTCCCTCTCCTTCTGGATTGGCAGGTTTGTTCTAACAATTCTTGTTGTCGAATGATTTTTTTTTATTCAATTATGAGTTTATGCAAGGCATCTGATGTGAAATTGTCTGCTTCTATGGAATTAGGTTTAGAACTTTCTTGCTGTAGTTTTAGATATGTTTGTTGATTGGGCCCTTGTTGCCCACATTATTATGAGGATTTTATGCGTTTGATCATTTAATTTTGTTGATTGGGCCCTTGTTCTCCTGTTGGACATTGTTGAAAGAAGAGTTGGTGCTTACTATTTGTTGTACCCTTTTTGAAGTTGTTTCAGTTAGTGAATATGAAAGCAGAAGTCTTGTCAGTGACAAGCTGTGAAGGAGCAGGGGAAATCAGGTGCCACGACTTAATAGTTTTCAGATCATTTGGGAATAGAAACAGAAACTTTTCATTAATATAGTTTTTAATGGGAACTGTAGACTGTATAAACCAAACAAAGAGACAAAAGGAGAGATGAGAAATCCCCTTTTAACACCAATTGGCATAGATCATCAAGACGTTGTAGTTAGAAAATTCTTTGGATAAAGTGCACCAATTAGAGGAAAAGAATATAACTAGGTCCCTGAAGTCTTGTAAAATAGCACATTTTTGAACATCTTTTTATGATTTTTTTTTAAACCACAACCTCCAAGCTAACACGTGATAGCATTGTACTGAATAATCTTTTCTTGCCCTCCAAAGGGATGTGGATGGCCACAAAGAAGTTGAATTAGAGCTACCACATTATTTTAGGGAAGTACCAATGAAGGTTAAATTAACTAAACAACTTCCCCCAACTTTTACCTGCAAATGAAAGTAGAGGCAATTCTAGTCATTTGATGATCTTTTATCGAAAAGAGTACAAACATGTGGACAAAGCATAGTTAGCAAACATTTTCTGCAATTTGTTGCTAGCCTTCAGCAGATCTTGGAATTTTAGATTTCCTAATAGCCTTGTCCAGGCAGGTACCAAGGATTTCTTTCATTTGAAAGAGTCCCAAAAACCCGGATTTGCAGGTAGAGGATTCACTGATCTTTGCGAATAGACTCCTTCCATTGATCAGCTGTCTGAGGCCAACTTCCTTGAGTGGATTCTTTACCTGCAAATTGGAGTTTATATCGGAATAAAGGCACTCATTTTCAACTTTAGCAGAAAACAAAGAGTGGTTGTATGACTCTTCATTTCTTTAGACGTCTCCAATGAGTGGAAGAAACCTTTTAGAATTGATAAAATATAATTGCTTTGCAAATGGAAATTTATTTTTACCCTGTGATAAAAAAAACTTCGATTCAAGGTTAGCTTGACAAATTAATTGCTTTAGGTTTTTCTAAAATGCTTTATTTATAAGTTATTGCCCCATCTAGTCCTCTTTTCTGATTTTGGTGGAGGGGGGGGGGGGGGGGGTTGCTTAATCTCGCGTACTTTGTTTGACTGACTGTCCGTTTAATGTACAGTTTCAGTCGTTGGTTCTTATGTAATTTCTATTCTCCATCCTTCTTCTCTTTCTCAATTCAAGGTCATGTTTTTGTTCAGGTTACTTTTTAGGAATTCAAGTTCAGCTATGGAGTGGGCTCAGAGGAACAAATACTTCCATCTTCTTTCTAGAGGAGTAGAACAAGATGGTTGGAAATTTGTCCTTCTTGCCCGTTTTTCACCGATTCCCTCATACGTTATAAATTATGCTCTTGCTGCGACCAAAGTTGGGTTCTTTCTAGATTTTCTGCTACCAACTGTAGTTGGATGCATGCCAATGATACTTCAGAACACATCGATTGGCAGTCTTGCTGGTGCTGCAGTTGCTTCAGCCTCAGGCGCTCAAAAATCTCAGGTATGGTCATACATTTTTCCTGTACTTGGTATTGGATCGAGCATTCTTATTTCCTGGAGGATTAAAAAGTACTCTAGTGGACTCAAAATGGCTGATAGTTCCTCTAGTGTTGAAGGGAGTGACAACGTTGACCCATCCAAAACCAAGGACTTAAAGAAAACTCGATAATCTTAAAGTAACAGTATGTTTTTTACATCTTTTAGATGAGATACATTCATTCATAATTTGTATACCTTGGACCAGTGTCCATGACAGGCCTTTTCTTTTCTTAAGAAATTAGATTTATGGCATATTTTCGTCTTTTGATTAGGGGGTTTCCGTTCACTTACATTAATCCAAACCTTTAATTCATTTAAGTTTTCATTTGAATCTGAGCCATAAACTAAAAGATGACTGTTCAGAAGAAATATCCAAGGAGAT

mRNA sequence

TCACTCCTCGGTTGTAAAAGAACCTTGTCCCCAAGGTTGAAAGATGGAAATTGCTTCTTGAAGTCATCAACGAACTCCCAAGTAGCTTCATGTTCAGGCAGCCCCTTCCAACTAATCAGCACTTCCTTTCCATTATTTCGAAAAGTGAAGACCTCCACAGGCTCTATAATCCATTCATACTCATCTGACAAGGGGGGAGATTCTGTTTGAACTTCCAGGTGTGGTCCCACAACCCGTTTCAACTGGGAGACGTGAAATACCGGATGGATTGTTGTGGTATTTGGGAGCTTCAATCGATAGGCTACATATCCTATCTTTTCCTCAATTTGATAAGGTCCAAAGAATTTGGGTGATAGCTTTTCATTCCTCTTCCTTGCTAAGGACTGCTGTCTGTATGCTCTGATTTTCAAAAAGACCCAGTCTCCTTCCTCAAAGTGCGCCTCTGTTCTTTTTTGGTCACCAAACTTTTTCATGCGCTCTTGGGCTGCTTGCAAATGGTTCTTCAACATGTTCAAAGTGACGTCCCCGTCAGCCAACTGCTGATCTAGCACTACATTTGAAGTTCTCATCCCTCAATAAGTGAATAATGGGGGTGGAGGTTTGCCATACACAACTTGGAGTTTGGTAGTCAATAAGTCAATAATAGGTCTGTCATAAGTCAATAATGTCGTTTGAGTGGAATTTGGTAGTAGTTGGAGATTGTTTTGCATTGGAGTTTGGCATTGGTATCGTTACACTTATTTTAGATCTTTGTTTTGTTCTTGGATGTCTAATGATGCTGTATGTATTCCTTTTATGAGAGTTGTGATCTTATTATTTTATTAGGTTGATTTGATACAAGATCGACACTCGTGCTTTTATTTGAATTTTTAGAAGTATATGTTAAACTTGTTTATCAGATGTAAGAAAAAATTGGGTGATTATTGTAGTTACACTATTATGTTGTCGAAATTTTCAGGACATTACAGGAAGATGGGAGTTGGATGGGGATGGTGGTCCAAATTAGCCACTATAGTGGCGGCGGTGGCGATTCTTAGAGAATTAGGGAAACGATATGGATGGGAAATTGACAAAGAAGCTGCTCTCAATGTGTTCGGCCAGTGGTCCGATCAACTGGGGATATGGGCCATGCCTGTGTATGTCGGCATCCATACCATCACACTTGCTCTGTGCTTGCCCTACGCTGTGTTCTTTGAAGCCACTGCTTCTTTGCTCTTTGGCTTCTTCCCTGCCGTGATTTGTGTTTTCTCTGCCAAGGTGCTTGGGGCTTCCCTCTCCTTCTGGATTGGCAGGTTACTTTTTAGGAATTCAAGTTCAGCTATGGAGTGGGCTCAGAGGAACAAATACTTCCATCTTCTTTCTAGAGGAGTAGAACAAGATGGTTGGAAATTTGTCCTTCTTGCCCGTTTTTCACCGATTCCCTCATACGTTATAAATTATGCTCTTGCTGCGACCAAAGTTGGGTTCTTTCTAGATTTTCTGCTACCAACTGTAGTTGGATGCATGCCAATGATACTTCAGAACACATCGATTGGCAGTCTTGCTGGTGCTGCAGTTGCTTCAGCCTCAGGCGCTCAAAAATCTCAGGTATGGTCATACATTTTTCCTGTACTTGGTATTGGATCGAGCATTCTTATTTCCTGGAGGATTAAAAAGTACTCTAGTGGACTCAAAATGGCTGATAGTTCCTCTAGTGTTGAAGGGAGTGACAACGTTGACCCATCCAAAACCAAGGACTTAAAGAAAACTCGATAATCTTAAAGTAACAGTATGTTTTTTACATCTTTTAGATGAGATACATTCATTCATAATTTGTATACCTTGGACCAGTGTCCATGACAGGCCTTTTCTTTTCTTAAGAAATTAGATTTATGGCATATTTTCGTCTTTTGATTAGGGGGTTTCCGTTCACTTACATTAATCCAAACCTTTAATTCATTTAAGTTTTCATTTGAATCTGAGCCATAAACTAAAAGATGACTGTTCAGAAGAAATATCCAAGGAGAT

Coding sequence (CDS)

ATGTTAAACTTGTTTATCAGATGTAAGAAAAAATTGGGTGATTATTGTAGTTACACTATTATGTTGTCGAAATTTTCAGGACATTACAGGAAGATGGGAGTTGGATGGGGATGGTGGTCCAAATTAGCCACTATAGTGGCGGCGGTGGCGATTCTTAGAGAATTAGGGAAACGATATGGATGGGAAATTGACAAAGAAGCTGCTCTCAATGTGTTCGGCCAGTGGTCCGATCAACTGGGGATATGGGCCATGCCTGTGTATGTCGGCATCCATACCATCACACTTGCTCTGTGCTTGCCCTACGCTGTGTTCTTTGAAGCCACTGCTTCTTTGCTCTTTGGCTTCTTCCCTGCCGTGATTTGTGTTTTCTCTGCCAAGGTGCTTGGGGCTTCCCTCTCCTTCTGGATTGGCAGGTTACTTTTTAGGAATTCAAGTTCAGCTATGGAGTGGGCTCAGAGGAACAAATACTTCCATCTTCTTTCTAGAGGAGTAGAACAAGATGGTTGGAAATTTGTCCTTCTTGCCCGTTTTTCACCGATTCCCTCATACGTTATAAATTATGCTCTTGCTGCGACCAAAGTTGGGTTCTTTCTAGATTTTCTGCTACCAACTGTAGTTGGATGCATGCCAATGATACTTCAGAACACATCGATTGGCAGTCTTGCTGGTGCTGCAGTTGCTTCAGCCTCAGGCGCTCAAAAATCTCAGGTATGGTCATACATTTTTCCTGTACTTGGTATTGGATCGAGCATTCTTATTTCCTGGAGGATTAAAAAGTACTCTAGTGGACTCAAAATGGCTGATAGTTCCTCTAGTGTTGAAGGGAGTGACAACGTTGACCCATCCAAAACCAAGGACTTAAAGAAAACTCGATAA

Protein sequence

MLNLFIRCKKKLGDYCSYTIMLSKFSGHYRKMGVGWGWWSKLATIVAAVAILRELGKRYGWEIDKEAALNVFGQWSDQLGIWAMPVYVGIHTITLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFRNSSSAMEWAQRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVVGCMPMILQNTSIGSLAGAAVASASGAQKSQVWSYIFPVLGIGSSILISWRIKKYSSGLKMADSSSSVEGSDNVDPSKTKDLKKTR

Homology

[Close]

BLAST of Lcy10g007000 vs. ExPASy TrEMBL
Match: A0A6J1DDR9 (uncharacterized protein LOC111020123 OS=Momordica charantia OX=3673 GN=LOC111020123 PE=4 SV=1)

HSP 1 Score: 474.9 bits (1221), Expect = 2.3e-130
Identity = 239/260 (91.92%), Postives = 248/260 (95.38%), Query Frame = 0


Query: 32  MGVGWGWWSKLATIVAAVAILRELGKRYGWEIDKEAALNVFGQWSDQLGIWAMPVYVGIH 91
           MG GW  WSKLA  VA VAILRELGKRYGWEIDKEAA+ V GQWSD+LGIWAMP YVGIH
Sbjct: 1   MGAGWRRWSKLAAAVAVVAILRELGKRYGWEIDKEAAIEVVGQWSDRLGIWAMPAYVGIH 60

Query: 92  TITLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFRNSSSAMEWA 151
           T TLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFRNS SAMEWA
Sbjct: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFRNSKSAMEWA 120

Query: 152 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVVGCMPM 211
           QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTV+GC+PM
Sbjct: 121 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCLPM 180

Query: 212 ILQNTSIGSLAGAAVASASGAQKSQVWSYIFPVLGIGSSILISWRIKKYSSGLKMADSSS 271
           ILQNTSIGSLAGAAVASASG+QKSQ+WSYIFPVLGIGSSILISWRIKKYSSGLKMA+SSS
Sbjct: 181 ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISWRIKKYSSGLKMAESSS 240

Query: 272 SVEGSDNVDPSKTKDLKKTR 292
           SVEGSD+VD SKT+DLKKTR
Sbjct: 241 SVEGSDSVDTSKTRDLKKTR 260

[Close]

BLAST of Lcy10g007000 vs. ExPASy TrEMBL
Match: A0A6J1F1R5 (uncharacterized protein LOC111441406 OS=Cucurbita moschata OX=3662 GN=LOC111441406 PE=4 SV=1)

HSP 1 Score: 468.0 bits (1203), Expect = 2.9e-128
Identity = 234/260 (90.00%), Postives = 248/260 (95.38%), Query Frame = 0


Query: 32  MGVGWGWWSKLATIVAAVAILRELGKRYGWEIDKEAALNVFGQWSDQLGIWAMPVYVGIH 91
           MG GWG WSKLA +VA VAILRELGK YGWEID+EAAL VFGQWSD+LG+WAMP YVG+H
Sbjct: 1   MGAGWGRWSKLAAVVAVVAILRELGKLYGWEIDREAALKVFGQWSDRLGVWAMPAYVGVH 60

Query: 92  TITLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFRNSSSAMEWA 151
           T TLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLF+NSSSAMEWA
Sbjct: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFKNSSSAMEWA 120

Query: 152 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVVGCMPM 211
           QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTV+GCMPM
Sbjct: 121 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM 180

Query: 212 ILQNTSIGSLAGAAVASASGAQKSQVWSYIFPVLGIGSSILISWRIKKYSSGLKMADSSS 271
           ILQNTSIGSLAGAAVASASG+QKSQ+WSYIFPVLGIGSSILIS RIKKYSSGLKMA+SSS
Sbjct: 181 ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISLRIKKYSSGLKMAESSS 240

Query: 272 SVEGSDNVDPSKTKDLKKTR 292
           SVE SD+V+PSK K+ KKT+
Sbjct: 241 SVERSDSVEPSKAKEFKKTQ 260

[Close]

BLAST of Lcy10g007000 vs. ExPASy TrEMBL
Match: A0A0A0LFP4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G845510 PE=4 SV=1)

HSP 1 Score: 466.1 bits (1198), Expect = 1.1e-127
Identity = 233/260 (89.62%), Postives = 245/260 (94.23%), Query Frame = 0


Query: 32  MGVGWGWWSKLATIVAAVAILRELGKRYGWEIDKEAALNVFGQWSDQLGIWAMPVYVGIH 91
           MG  WG WSKLA IVA VAILR+LGK YGWE D++AAL VF QWSD+LG+WAMP YVGIH
Sbjct: 1   MGAAWGRWSKLAAIVAVVAILRQLGKTYGWEFDRDAALKVFTQWSDRLGVWAMPAYVGIH 60

Query: 92  TITLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFRNSSSAMEWA 151
           T TLALCLPYAVFFEATASLLFGFFPAVICVF AKVLGASLSFWIGRLLF+NSSSAMEWA
Sbjct: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFFAKVLGASLSFWIGRLLFKNSSSAMEWA 120

Query: 152 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVVGCMPM 211
           QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTV+GCMPM
Sbjct: 121 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM 180

Query: 212 ILQNTSIGSLAGAAVASASGAQKSQVWSYIFPVLGIGSSILISWRIKKYSSGLKMADSSS 271
           ILQNTSIGSLAGAAVASASG+QKSQ+WSYIFPVLGIGSSILISWRIKKYSSGLK+A SSS
Sbjct: 181 ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISWRIKKYSSGLKVAGSSS 240

Query: 272 SVEGSDNVDPSKTKDLKKTR 292
           S EG+DNVDPSKTK+ KKTR
Sbjct: 241 SDEGNDNVDPSKTKEFKKTR 260

[Close]

BLAST of Lcy10g007000 vs. ExPASy TrEMBL
Match: A0A1S3CN62 (uncharacterized protein LOC103502831 OS=Cucumis melo OX=3656 GN=LOC103502831 PE=4 SV=1)

HSP 1 Score: 466.1 bits (1198), Expect = 1.1e-127
Identity = 234/260 (90.00%), Postives = 244/260 (93.85%), Query Frame = 0


Query: 32  MGVGWGWWSKLATIVAAVAILRELGKRYGWEIDKEAALNVFGQWSDQLGIWAMPVYVGIH 91
           M   WG WSKLA +VAAVAILRELGKRYGWE D+EAAL VF QWSD+LG+WAMP YVGIH
Sbjct: 1   MAPAWGRWSKLAALVAAVAILRELGKRYGWEFDREAALKVFTQWSDRLGVWAMPAYVGIH 60

Query: 92  TITLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFRNSSSAMEWA 151
           T TLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLF NSSSAMEWA
Sbjct: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFTNSSSAMEWA 120

Query: 152 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVVGCMPM 211
           QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTV+GCMPM
Sbjct: 121 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM 180

Query: 212 ILQNTSIGSLAGAAVASASGAQKSQVWSYIFPVLGIGSSILISWRIKKYSSGLKMADSSS 271
           ILQNTSIGSLAGAAVASASG+ KSQ+WSYIFPVLGIGSSILISWRIKKYSSGLKM  SSS
Sbjct: 181 ILQNTSIGSLAGAAVASASGSHKSQIWSYIFPVLGIGSSILISWRIKKYSSGLKMTGSSS 240

Query: 272 SVEGSDNVDPSKTKDLKKTR 292
           S EG+DNVDPSKTK+ KKT+
Sbjct: 241 SDEGNDNVDPSKTKEFKKTQ 260

[Close]

BLAST of Lcy10g007000 vs. ExPASy TrEMBL
Match: A0A6J1J5V4 (uncharacterized protein LOC111481545 OS=Cucurbita maxima OX=3661 GN=LOC111481545 PE=4 SV=1)

HSP 1 Score: 456.8 bits (1174), Expect = 6.6e-125
Identity = 232/260 (89.23%), Postives = 243/260 (93.46%), Query Frame = 0


Query: 32  MGVGWGWWSKLATIVAAVAILRELGKRYGWEIDKEAALNVFGQWSDQLGIWAMPVYVGIH 91
           MG GWG WSKLA +VA VAILRELGK YGWEID+EAAL VFG WSD+LG+WAMP YVGIH
Sbjct: 1   MGAGWGRWSKLAAVVAVVAILRELGKLYGWEIDREAALKVFGHWSDRLGVWAMPAYVGIH 60

Query: 92  TITLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFRNSSSAMEWA 151
           T TLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLF+NSSSAMEWA
Sbjct: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFKNSSSAMEWA 120

Query: 152 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVVGCMPM 211
           QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTV+GCMPM
Sbjct: 121 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM 180

Query: 212 ILQNTSIGSLAGAAVASASGAQKSQVWSYIFPVLGIGSSILISWRIKKYSSGLKMADSSS 271
           ILQNTSIGSLAGAAVASASG+QKSQ+WSYIFPVLGIGSSILIS RIKKYSSGLKMA+SSS
Sbjct: 181 ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISLRIKKYSSGLKMAESSS 240

Query: 272 SVEGSDNVDPSKTKDLKKTR 292
           SVE      PSKTK+ KKT+
Sbjct: 241 SVE------PSKTKEFKKTQ 254

[Close]

BLAST of Lcy10g007000 vs. NCBI nr
Match: XP_022152375.1 (uncharacterized protein LOC111020123 [Momordica charantia])

HSP 1 Score: 474.9 bits (1221), Expect = 4.8e-130
Identity = 239/260 (91.92%), Postives = 248/260 (95.38%), Query Frame = 0


Query: 32  MGVGWGWWSKLATIVAAVAILRELGKRYGWEIDKEAALNVFGQWSDQLGIWAMPVYVGIH 91
           MG GW  WSKLA  VA VAILRELGKRYGWEIDKEAA+ V GQWSD+LGIWAMP YVGIH
Sbjct: 1   MGAGWRRWSKLAAAVAVVAILRELGKRYGWEIDKEAAIEVVGQWSDRLGIWAMPAYVGIH 60

Query: 92  TITLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFRNSSSAMEWA 151
           T TLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFRNS SAMEWA
Sbjct: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFRNSKSAMEWA 120

Query: 152 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVVGCMPM 211
           QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTV+GC+PM
Sbjct: 121 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCLPM 180

Query: 212 ILQNTSIGSLAGAAVASASGAQKSQVWSYIFPVLGIGSSILISWRIKKYSSGLKMADSSS 271
           ILQNTSIGSLAGAAVASASG+QKSQ+WSYIFPVLGIGSSILISWRIKKYSSGLKMA+SSS
Sbjct: 181 ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISWRIKKYSSGLKMAESSS 240

Query: 272 SVEGSDNVDPSKTKDLKKTR 292
           SVEGSD+VD SKT+DLKKTR
Sbjct: 241 SVEGSDSVDTSKTRDLKKTR 260

[Close]

BLAST of Lcy10g007000 vs. NCBI nr
Match: XP_038903022.1 (uncharacterized protein LOC120089724 [Benincasa hispida])

HSP 1 Score: 469.2 bits (1206), Expect = 2.7e-128
Identity = 236/260 (90.77%), Postives = 248/260 (95.38%), Query Frame = 0


Query: 32  MGVGWGWWSKLATIVAAVAILRELGKRYGWEIDKEAALNVFGQWSDQLGIWAMPVYVGIH 91
           MG GWG WSKLA +VAAVAILRELGKRYGWEIDKEA+L VF QWSD+LG+WAMP YVGIH
Sbjct: 1   MGAGWGRWSKLAAVVAAVAILRELGKRYGWEIDKEASLKVFSQWSDRLGVWAMPAYVGIH 60

Query: 92  TITLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFRNSSSAMEWA 151
           T TLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFR SSSAMEWA
Sbjct: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFRKSSSAMEWA 120

Query: 152 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVVGCMPM 211
           QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTV+GCMPM
Sbjct: 121 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM 180

Query: 212 ILQNTSIGSLAGAAVASASGAQKSQVWSYIFPVLGIGSSILISWRIKKYSSGLKMADSSS 271
           ILQNTSIGSLAGAAVASASG+QKSQ+WSYIFP+LGIGSSILISWRIKKYSSGLKMA+ SS
Sbjct: 181 ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPILGIGSSILISWRIKKYSSGLKMAE-SS 240

Query: 272 SVEGSDNVDPSKTKDLKKTR 292
           SV G+DNVDPSK K+ KKT+
Sbjct: 241 SVAGNDNVDPSKIKNSKKTQ 259

[Close]

BLAST of Lcy10g007000 vs. NCBI nr
Match: XP_022934149.1 (uncharacterized protein LOC111441406 [Cucurbita moschata])

HSP 1 Score: 468.0 bits (1203), Expect = 5.9e-128
Identity = 234/260 (90.00%), Postives = 248/260 (95.38%), Query Frame = 0


Query: 32  MGVGWGWWSKLATIVAAVAILRELGKRYGWEIDKEAALNVFGQWSDQLGIWAMPVYVGIH 91
           MG GWG WSKLA +VA VAILRELGK YGWEID+EAAL VFGQWSD+LG+WAMP YVG+H
Sbjct: 1   MGAGWGRWSKLAAVVAVVAILRELGKLYGWEIDREAALKVFGQWSDRLGVWAMPAYVGVH 60

Query: 92  TITLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFRNSSSAMEWA 151
           T TLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLF+NSSSAMEWA
Sbjct: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFKNSSSAMEWA 120

Query: 152 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVVGCMPM 211
           QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTV+GCMPM
Sbjct: 121 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM 180

Query: 212 ILQNTSIGSLAGAAVASASGAQKSQVWSYIFPVLGIGSSILISWRIKKYSSGLKMADSSS 271
           ILQNTSIGSLAGAAVASASG+QKSQ+WSYIFPVLGIGSSILIS RIKKYSSGLKMA+SSS
Sbjct: 181 ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISLRIKKYSSGLKMAESSS 240

Query: 272 SVEGSDNVDPSKTKDLKKTR 292
           SVE SD+V+PSK K+ KKT+
Sbjct: 241 SVERSDSVEPSKAKEFKKTQ 260

[Close]

BLAST of Lcy10g007000 vs. NCBI nr
Match: XP_004141157.1 (uncharacterized protein LOC101209858 [Cucumis sativus] >KGN59784.1 hypothetical protein Csa_001292 [Cucumis sativus])

HSP 1 Score: 466.1 bits (1198), Expect = 2.3e-127
Identity = 233/260 (89.62%), Postives = 245/260 (94.23%), Query Frame = 0


Query: 32  MGVGWGWWSKLATIVAAVAILRELGKRYGWEIDKEAALNVFGQWSDQLGIWAMPVYVGIH 91
           MG  WG WSKLA IVA VAILR+LGK YGWE D++AAL VF QWSD+LG+WAMP YVGIH
Sbjct: 1   MGAAWGRWSKLAAIVAVVAILRQLGKTYGWEFDRDAALKVFTQWSDRLGVWAMPAYVGIH 60

Query: 92  TITLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFRNSSSAMEWA 151
           T TLALCLPYAVFFEATASLLFGFFPAVICVF AKVLGASLSFWIGRLLF+NSSSAMEWA
Sbjct: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFFAKVLGASLSFWIGRLLFKNSSSAMEWA 120

Query: 152 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVVGCMPM 211
           QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTV+GCMPM
Sbjct: 121 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM 180

Query: 212 ILQNTSIGSLAGAAVASASGAQKSQVWSYIFPVLGIGSSILISWRIKKYSSGLKMADSSS 271
           ILQNTSIGSLAGAAVASASG+QKSQ+WSYIFPVLGIGSSILISWRIKKYSSGLK+A SSS
Sbjct: 181 ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISWRIKKYSSGLKVAGSSS 240

Query: 272 SVEGSDNVDPSKTKDLKKTR 292
           S EG+DNVDPSKTK+ KKTR
Sbjct: 241 SDEGNDNVDPSKTKEFKKTR 260

[Close]

BLAST of Lcy10g007000 vs. NCBI nr
Match: XP_008465163.1 (PREDICTED: uncharacterized protein LOC103502831 [Cucumis melo])

HSP 1 Score: 466.1 bits (1198), Expect = 2.3e-127
Identity = 234/260 (90.00%), Postives = 244/260 (93.85%), Query Frame = 0


Query: 32  MGVGWGWWSKLATIVAAVAILRELGKRYGWEIDKEAALNVFGQWSDQLGIWAMPVYVGIH 91
           M   WG WSKLA +VAAVAILRELGKRYGWE D+EAAL VF QWSD+LG+WAMP YVGIH
Sbjct: 1   MAPAWGRWSKLAALVAAVAILRELGKRYGWEFDREAALKVFTQWSDRLGVWAMPAYVGIH 60

Query: 92  TITLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFRNSSSAMEWA 151
           T TLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLF NSSSAMEWA
Sbjct: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFTNSSSAMEWA 120

Query: 152 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVVGCMPM 211
           QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTV+GCMPM
Sbjct: 121 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM 180

Query: 212 ILQNTSIGSLAGAAVASASGAQKSQVWSYIFPVLGIGSSILISWRIKKYSSGLKMADSSS 271
           ILQNTSIGSLAGAAVASASG+ KSQ+WSYIFPVLGIGSSILISWRIKKYSSGLKM  SSS
Sbjct: 181 ILQNTSIGSLAGAAVASASGSHKSQIWSYIFPVLGIGSSILISWRIKKYSSGLKMTGSSS 240

Query: 272 SVEGSDNVDPSKTKDLKKTR 292
           S EG+DNVDPSKTK+ KKT+
Sbjct: 241 SDEGNDNVDPSKTKEFKKTQ 260

[Close]

BLAST of Lcy10g007000 vs. TAIR 10
Match: AT1G44960.1 (SNARE associated Golgi protein family )

HSP 1 Score: 321.6 bits (823), Expect = 6.4e-88
Identity = 167/257 (64.98%), Postives = 202/257 (78.60%), Query Frame = 0


Query: 39  WSKLATIVAAVAIL-RELGKRYGWEIDKEAALNVFGQWSDQLGIWAMPVYVGIHTITLAL 98
           W  +A  VA +AI+ R+   +YGW  +KEAAL    +WSD+LGIWA+P YV +HTITLAL
Sbjct: 4   WLAIAATVAIIAIIVRQGTTQYGW--NKEAALEKLKEWSDRLGIWAIPTYVAVHTITLAL 63

Query: 99  CLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFRNSSSAMEWAQRNKYF 158
           CLP+AVFFEA AS+LFGF PA++CVFSAKVL AS SFWIGR +F++S+ A  WA  NKYF
Sbjct: 64  CLPHAVFFEAGASMLFGFLPALLCVFSAKVLAASFSFWIGRFVFKSSTRATGWAHSNKYF 123

Query: 159 HLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVVGCMPMILQNTS 218
           ++LSRGVE+DGWKFVLLARFSPIPSYVINYALAAT+V F  DFL PTV+GC+PMILQN S
Sbjct: 124 NILSRGVERDGWKFVLLARFSPIPSYVINYALAATEVRFVADFLFPTVIGCLPMILQNAS 183

Query: 219 IGSLAGAAVASASGAQKSQVWSYIFPVLGIGSSILISWRIKKYSSGLKMADS-----SSS 278
           +GSLAG AVAS +G QKSQVW Y+FPVLGI SS+LIS RIKKYS+G+  A S     +SS
Sbjct: 184 VGSLAGMAVASVAGKQKSQVWGYVFPVLGILSSVLISLRIKKYSAGITEASSDTSANNSS 243

Query: 279 VEGSDNVDPSKTKDLKK 290
           +  S+  +P+   D  K
Sbjct: 244 LASSETANPAYGTDGSK 258

[Close]

BLAST of Lcy10g007000 vs. TAIR 10
Match: AT1G03260.1 (SNARE associated Golgi protein family )

HSP 1 Score: 48.1 bits (113), Expect = 1.4e-05
Identity = 53/222 (23.87%), Postives = 98/222 (44.14%), Query Frame = 0


Query: 66  EAALNVFGQW-SDQLGIWAMPVYVGIHTITLALCLPYAVFFEATASLLFGFFPAVICVFS 125
           E  L  F  W  + LG +  P+ + +  I L +    A         LFG     +    
Sbjct: 33  EQKLKDFLLWIKEDLGPFG-PLALALAYIPLTIVAVPASVLTLGGGYLFGLPVGFVADSL 92

Query: 126 AKVLGASLSFWIGRLLFRNSSSAMEWAQRNKYFHLLSRGVEQDGWKFVLLARFSPI-PSY 185
              LGA+ +F +GR +    S      +    F  +S  +++ G+K VLL R  PI P  
Sbjct: 93  GATLGATAAFLLGRTI--GKSYVTSKIKHYPKFQAVSVAIQKSGFKIVLLLRVVPILPFN 152

Query: 186 VINYALAATKVGFFLDFLLPTVVGCMPMILQNTSIGSLAGAAVASASGAQKSQVWSYIFP 245
           ++NY L+ T V    +++L T +G MP+      +G+          G  +  V+ ++  
Sbjct: 153 MLNYLLSVTPVRLG-EYMLATWLGMMPITFALVYVGTTLKDLSDITHGWHEVSVFRWVIM 212

Query: 246 VLGIGSSILI---SWRIKKYSSGLKMADSSSSVEGSDNVDPS 283
           ++G+  ++++     R+ K S    +A++ + ++G  N D S
Sbjct: 213 MVGVALAVILIICITRVAKSSLDKALAENGTELDGKKNDDAS 250

[Close]

BLAST of Lcy10g007000 vs. TAIR 10
Match: AT1G22850.1 (SNARE associated Golgi protein family )

HSP 1 Score: 46.2 bits (108), Expect = 5.2e-05
Identity = 47/192 (24.48%), Postives = 86/192 (44.79%), Query Frame = 0


Query: 44  TIVAAVAILREL----GKRYGWEIDKEAALNVFGQWSDQLGIWAMPVYVGIHTITLALCL 103
           TI+A V ++  +    G  Y +       L  F  + +  G     +++ ++     L +
Sbjct: 109 TILAGVLLIGTVGGFAGVGYVYRDQINTFLTQFSTYIEGYGTAGYALFIAVYAGLEILAI 168

Query: 104 PYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFRNSSSAMEWAQRNKYFHL 163
           P A+    +A LLFG     I V  +  + AS++F I R   R     ++  + NK F  
Sbjct: 169 P-ALPLTMSAGLLFGPLIGTIIVSISGTMAASVAFLIARYFAR--ERILKLVEDNKKFLA 228

Query: 164 LSRGVEQDGWKFVLLARFSP-IPSYVINYALAATKVGFFLDFLLPTVVGCMPMILQNTSI 223
           + + + ++G++ V L R SP +P  + NY    T V  F+ ++L + +G +P      S 
Sbjct: 229 IDKAIGENGFRVVTLLRLSPLLPFSLGNYLYGLTSVK-FVPYVLGSWLGMLPGSWAYVSA 288

Query: 224 GSLAGAAVASAS 231
           G+   A +   S
Sbjct: 289 GAFGRAIIQEES 296

The following BLAST results are available for this feature:

BLAST of Lcy10g007000 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy10g007000 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DDR9	2.3e-130	91.92	uncharacterized protein LOC111020123 OS=Momordica charantia OX=3673 GN=LOC111020...	[more]
A0A6J1F1R5	2.9e-128	90.00	uncharacterized protein LOC111441406 OS=Cucurbita moschata OX=3662 GN=LOC1114414...	[more]
A0A0A0LFP4	1.1e-127	89.62	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G845510 PE=4 SV=1	[more]
A0A1S3CN62	1.1e-127	90.00	uncharacterized protein LOC103502831 OS=Cucumis melo OX=3656 GN=LOC103502831 PE=...	[more]
A0A6J1J5V4	6.6e-125	89.23	uncharacterized protein LOC111481545 OS=Cucurbita maxima OX=3661 GN=LOC111481545...	[more]

BLAST of Lcy10g007000 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022152375.1	4.8e-130	91.92	uncharacterized protein LOC111020123 [Momordica charantia]	[more]
XP_038903022.1	2.7e-128	90.77	uncharacterized protein LOC120089724 [Benincasa hispida]	[more]
XP_022934149.1	5.9e-128	90.00	uncharacterized protein LOC111441406 [Cucurbita moschata]	[more]
XP_004141157.1	2.3e-127	89.62	uncharacterized protein LOC101209858 [Cucumis sativus] >KGN59784.1 hypothetical ...	[more]
XP_008465163.1	2.3e-127	90.00	PREDICTED: uncharacterized protein LOC103502831 [Cucumis melo]	[more]

BLAST of Lcy10g007000 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G44960.1	6.4e-88	64.98	SNARE associated Golgi protein family	[more]
AT1G03260.1	1.4e-05	23.87	SNARE associated Golgi protein family	[more]
AT1G22850.1	5.2e-05	24.48	SNARE associated Golgi protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032816	SNARE associated Golgi protein	PFAM	PF09335	SNARE_assoc	coord: 99..220 e-value: 7.4E-21 score: 74.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 267..291
None	No IPR available	PANTHER	PTHR47699	SNARE ASSOCIATED GOLGI PROTEIN FAMILY	coord: 37..285

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy10g007000.1	Lcy10g007000.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane