Lcy10g006970 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy10g006970
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Protein ALP1-like
Location	Chr10: 28494889 .. 28496448 (+)
RNA-Seq Expression	Lcy10g006970
Synteny	Lcy10g006970

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTGTTCTGAAGCTCGCTTACTTTCTAATAATGATGTGATGGACTTGCTTGAAGAAGAAGAAGAATATGAGGATGAAGATCTCTTGATATTTTTTCGTCTATTGAGGGAAGAATTGCATAAAACACAAATGCTTAGACAACCCTACAGAACTTCTACACTCACAGGTCATGATTACGTGGTTGAATTGTTAAATGCTAACGATACAAGATGCTTTGATTGTTTTAGGATGAAAAAAAGATGCATTTGTAACGTTTTGTGAAGAGTTGAAAAACACCACTAATCTAAAATCTTCCAGATATTTGATGTTGGTTCATTATATTTTGTGTAAGAAAAAAATATTTTGTTTGTTACTTTGATTAATTGATATGTTGTTGGTTTATTATATTTTGTGCTAGAAAGATCTTTGTTTTTTTTTAATTTACTAGTAGTTTATGTTATTTGAACATGATTAAAATAGGTATTAATTATGGATTGTTCTGAAGCTCGCTTACTTTCTAATAATGATGTGATGGACTTGCTTGAAGAAGAAGAAGAATATGAGGATGAAGATCTCTTGATATTTTTTCGTATATTAAGGGAAGAATTGCATAAAACACAAATGCTTAGACAACCCTGCAGAACTTCTACACTCAGAGGTCATGATTACGTGGTTGAATTGTTAAATGCTAATGATACAAGATGCTTTGATTGTTTTAGGATGAAAAAAAGATGCATTTGTAACGTTTTGTGAAGAGTTGAAAAACACCACTAATCTAAAATCTTCCAGATATTTGACTGTGCAAGAACAAGTGGTTATAATTTTGCTCACTATATCACACAATGAAATGAATCGCTTAGTAGCAAAAAGATTCCAACATTTTGGTCAGACAATCTGACGATATTTTAATCACGTACTACAGAAAGTTTGCCAGCTTGGAACCAAAATTATTTGTCCATTGGAACTTGACAATGTCCCTCCAGAGATTATGTTCAAATCTAAATACTATCCTTTCTTTAAGGTAATTTTCTTGGTTAGTTATTATTTTATAAGTTATTTTAATGAAAATTAGTTTGAAATATATACTTTTATTTAATAGGATTGTGTTGGTACAATTGATGGAACTAACATTAGCGCATCTATTCCACAACATGAGCAAATTCCATATCGTGGTAAAAAGACAAATCCCACATGGAATGTTATGTGTCTTTGCTCTTTTGATATGCGGTTTACATTTGTCATGTCTGGTTGGGAAGGAACAGAAAATAACTTTCGAATCTTTCTTGAATGTATTAGAGATCCTGCAAATAAATTTCCAATACCTACTAGAGGTATATATCTTTTATTTTTTTAGAAAATAATATTCTTTCTATTTGGCTATTGTTTTATTGATTAGAAATATTCTTGATTGAACAGATCGATATTATCTTGTTGATTCTGGTTATACTAATATGCTTGGATTTCTATAACCCTATCGTGGAGAAAGATATCATTTGCGAGATTTTAGAGACGATAGACGTCAACCACAAGGTAAAGAAGAGTTATTCAACTATCGACATTCATCACTTCGCAATGTGA

mRNA sequence

ATGGATTGTTCTGAAGCTCGCTTACTTTCTAATAATGATGTGATGGACTTGCTTGAAGAAGAAGAAGAATATGAGGATGAAGATCTCTTGATATTTTTTCGTCTATTGAGGGAAGAATTGCATAAAACACAAATGCTTAGACAACCCTACAGAACTTCTACACTCACAGGTCATGATTACGTGGTATTAATTATGGATTGTTCTGAAGCTCGCTTACTTTCTAATAATGATGTGATGGACTTGCTTGAAGAAGAAGAAGAATATGAGGATGAAGATCTCTTGATATTTTTTCGTATATTAAGGGAAGAATTGCATAAAACACAAATGCTTAGACAACCCTGCAGAACTTCTACACTCAGAGGTCATGATTACGTGAAAGTTTGCCAGCTTGGAACCAAAATTATTTGTCCATTGGAACTTGACAATGTCCCTCCAGAGATTATGTTCAAATCTAAATACTATCCTTTCTTTAAGGATTGTGTTGGTACAATTGATGGAACTAACATTAGCGCATCTATTCCACAACATGAGCAAATTCCATATCGTGGTAAAAAGACAAATCCCACATGGAATGTTATGTGTCTTTGCTCTTTTGATATGCGGTTTACATTTGTCATGTCTGGTTGGGAAGGAACAGAAAATAACTTTCGAATCTTTCTTGAATGTATTAGAGATCCTGCAAATAAATTTCCAATACCTACTAGAGAAATATTCTTGATTGAACAGATCGATATTATCTTGTTGATTCTGGTTATACTAATATGCTTGGATTTCTATAACCCTATCGTGGAGAAAGATATCATTTGCGAGATTTTAGAGACGATAGACGTCAACCACAAGGTAAAGAAGAGTTATTCAACTATCGACATTCATCACTTCGCAATGTGA

Coding sequence (CDS)

ATGGATTGTTCTGAAGCTCGCTTACTTTCTAATAATGATGTGATGGACTTGCTTGAAGAAGAAGAAGAATATGAGGATGAAGATCTCTTGATATTTTTTCGTCTATTGAGGGAAGAATTGCATAAAACACAAATGCTTAGACAACCCTACAGAACTTCTACACTCACAGGTCATGATTACGTGGTATTAATTATGGATTGTTCTGAAGCTCGCTTACTTTCTAATAATGATGTGATGGACTTGCTTGAAGAAGAAGAAGAATATGAGGATGAAGATCTCTTGATATTTTTTCGTATATTAAGGGAAGAATTGCATAAAACACAAATGCTTAGACAACCCTGCAGAACTTCTACACTCAGAGGTCATGATTACGTGAAAGTTTGCCAGCTTGGAACCAAAATTATTTGTCCATTGGAACTTGACAATGTCCCTCCAGAGATTATGTTCAAATCTAAATACTATCCTTTCTTTAAGGATTGTGTTGGTACAATTGATGGAACTAACATTAGCGCATCTATTCCACAACATGAGCAAATTCCATATCGTGGTAAAAAGACAAATCCCACATGGAATGTTATGTGTCTTTGCTCTTTTGATATGCGGTTTACATTTGTCATGTCTGGTTGGGAAGGAACAGAAAATAACTTTCGAATCTTTCTTGAATGTATTAGAGATCCTGCAAATAAATTTCCAATACCTACTAGAGAAATATTCTTGATTGAACAGATCGATATTATCTTGTTGATTCTGGTTATACTAATATGCTTGGATTTCTATAACCCTATCGTGGAGAAAGATATCATTTGCGAGATTTTAGAGACGATAGACGTCAACCACAAGGTAAAGAAGAGTTATTCAACTATCGACATTCATCACTTCGCAATGTGA

Protein sequence

MDCSEARLLSNNDVMDLLEEEEEYEDEDLLIFFRLLREELHKTQMLRQPYRTSTLTGHDYVVLIMDCSEARLLSNNDVMDLLEEEEEYEDEDLLIFFRILREELHKTQMLRQPCRTSTLRGHDYVKVCQLGTKIICPLELDNVPPEIMFKSKYYPFFKDCVGTIDGTNISASIPQHEQIPYRGKKTNPTWNVMCLCSFDMRFTFVMSGWEGTENNFRIFLECIRDPANKFPIPTREIFLIEQIDIILLILVILICLDFYNPIVEKDIICEILETIDVNHKVKKSYSTIDIHHFAM

Homology

[Close]

BLAST of Lcy10g006970 vs. ExPASy TrEMBL
Match: A0A5D3C7F6 (Protein ALP1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold157G00500 PE=3 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 8.7e-40
Identity = 72/115 (62.61%), Postives = 95/115 (82.61%), Query Frame = 0


Query: 126 KVCQLGTKIICPLELDNVPPEIMFKSKYYPFFKDCVGTIDGTNISASIPQHEQIPYRGKK 185
           KVC+LG +II P  +D V  +I+  SKYYPFFKDC+G IDGT+++ASIPQ+EQIP+RG+K
Sbjct: 41  KVCKLGGEIIRPPNMDTVATKIVSNSKYYPFFKDCIGAIDGTHVAASIPQNEQIPFRGRK 100

Query: 186 TNPTWNVMCLCSFDMRFTFVMSGWEGTENNFRIFLECIRDPANKFPIPTREIFLI 241
           TN TWN+MC+CSFDM FT+VMSGWEG+ N+ RI  ECI++P NKFP+P R+ + +
Sbjct: 101 TNTTWNIMCVCSFDMLFTYVMSGWEGSANDSRILQECIKNPENKFPMPKRDQYYL 155

[Close]

BLAST of Lcy10g006970 vs. ExPASy TrEMBL
Match: A0A5A7VNL5 (Putative nuclease HARBI1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold238G001450 PE=3 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 4.9e-35
Identity = 64/101 (63.37%), Postives = 84/101 (83.17%), Query Frame = 0


Query: 140 LDNVPPEIMFKSKYYPFFKDCVGTIDGTNISASIPQHEQIPYRGKKTNPTWNVMCLCSFD 199
           +D V  EI+  SKYYP FKDC+G IDGT+++ASIPQ+EQIP+RG+KTN TWN+MC+CSFD
Sbjct: 1   MDTVAMEIVSNSKYYPLFKDCIGAIDGTHVAASIPQNEQIPFRGRKTNTTWNIMCVCSFD 60

Query: 200 MRFTFVMSGWEGTENNFRIFLECIRDPANKFPIPTREIFLI 241
           M FT+VMSGWEG+ N+ RI  ECI++P NKFP+P R+ + +
Sbjct: 61  MLFTYVMSGWEGSANDSRILQECIKNPENKFPMPKRDQYYL 101

[Close]

BLAST of Lcy10g006970 vs. ExPASy TrEMBL
Match: A0A5D3DC11 (Protein ALP1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold392G00620 PE=3 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 8.4e-35
Identity = 63/101 (62.38%), Postives = 85/101 (84.16%), Query Frame = 0


Query: 140 LDNVPPEIMFKSKYYPFFKDCVGTIDGTNISASIPQHEQIPYRGKKTNPTWNVMCLCSFD 199
           ++ V  +I+  SKYYPFFKDC+G IDGT+++ASIPQ+EQIP+RG+KTN TWN+MC+CSFD
Sbjct: 1   MNTVATKIVSNSKYYPFFKDCIGAIDGTHVAASIPQNEQIPFRGRKTNTTWNIMCVCSFD 60

Query: 200 MRFTFVMSGWEGTENNFRIFLECIRDPANKFPIPTREIFLI 241
           M FT+VMSGWEG+ N+ RI  ECI++P NKFP+P R+ + +
Sbjct: 61  MLFTYVMSGWEGSANDSRILQECIKNPENKFPMPKRDQYYL 101

[Close]

BLAST of Lcy10g006970 vs. ExPASy TrEMBL
Match: A0A1S4E0U9 (uncharacterized protein LOC103496041 OS=Cucumis melo OX=3656 GN=LOC103496041 PE=3 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 2.3e-32
Identity = 62/101 (61.39%), Postives = 81/101 (80.20%), Query Frame = 0


Query: 140 LDNVPPEIMFKSKYYPFFKDCVGTIDGTNISASIPQHEQIPYRGKKTNPTWNVMCLCSFD 199
           +D +P EI+  SKYYPFFKD +G ID T++ ASI Q+EQI +RG+KTN TWN+MC+CSFD
Sbjct: 1   MDTIPMEIISNSKYYPFFKDFIGAIDDTHVVASILQNEQILFRGRKTNTTWNIMCVCSFD 60

Query: 200 MRFTFVMSGWEGTENNFRIFLECIRDPANKFPIPTREIFLI 241
           M FT+VMSGWEG+ N+FRI  ECI +P NKFP+P R+ + +
Sbjct: 61  MLFTYVMSGWEGSTNDFRILEECIENPENKFPMPKRDQYYL 101

[Close]

BLAST of Lcy10g006970 vs. ExPASy TrEMBL
Match: A0A4Y7J673 (Uncharacterized protein OS=Papaver somniferum OX=3469 GN=C5167_014815 PE=3 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 5.1e-32
Identity = 86/244 (35.25%), Postives = 135/244 (55.33%), Query Frame = 0


Query: 9   LSNNDVMDLLEEEEEYEDEDLLIFFRLLREELHKTQMLRQPYRTSTLTGHDYV------- 68
           + + D     +   + ED  + +   L+ +ELHK + ++ P  TS L+G +++       
Sbjct: 191 MESRDTSSSSDSSSDSEDSFMEL---LMVKELHK-RYIKIPMMTSVLSGREFIFELLNGH 250

Query: 69  ------VLIMDCSEARLL-SNNDVMDLLEEEEEYEDEDLLIFFRILREELHKTQMLRQPC 128
                 ++ MD S   LL S     D L+++     E+ +  F     +  + +++ +  
Sbjct: 251 PRRMYNLMRMDPSTFMLLCSTLRTNDFLQDDRSVSVEEAVGIFLATVSQSMRNRVVAEMF 310

Query: 129 RTSTLRGHDYVK-----VCQLGTKIICPLELDNVPPEIMFKSKYYPFFKDCVGTIDGTNI 188
           + S    + + K     +C+LG  II P  +D VPPEIM   K+YP+F DCVG IDGT+I
Sbjct: 311 QHSNETVYRHFKKVLKALCRLGCLIIKPPNMDEVPPEIMTNPKFYPWFVDCVGAIDGTHI 370

Query: 189 SASIPQHEQIPYRGKKTNPTWNVMCLCSFDMRFTFVMSGWEGTENNFRIFLECIRDPANK 234
           SA +P  +QIP+RG+K   T N+MC CSFDM FTFV +GWEGT N+ R+ ++ I +  NK
Sbjct: 371 SACVPASKQIPFRGRKAQITQNIMCACSFDMLFTFVYTGWEGTANDARVLMDAISNEENK 430

[Close]

BLAST of Lcy10g006970 vs. NCBI nr
Match: KAG8363101.1 (hypothetical protein BUALT_BualtUnG0004500 [Buddleja alternifolia])

HSP 1 Score: 179.5 bits (454), Expect = 4.3e-41
Identity = 99/245 (40.41%), Postives = 141/245 (57.55%), Query Frame = 0


Query: 16  DLLEEEEEYEDEDLLIFFRLL-REELHKTQMLRQPYRTSTLTGHDYVVLIMDCSEAR--- 75
           D++EE E+ E++ +++F  L   EE  +  +L+ P R S ++GH YV+ +M+ +  R   
Sbjct: 10  DIIEELEQIEEDVMMMFLMLFCFEEYERLYLLKTPCRNSKMSGHAYVMELMNANPTRCYD 69

Query: 76  ---------LLSNNDVMD---LLEEEEEYEDEDLLIFFRILREELHK---TQMLRQPCRT 135
                    +  NN +M+   L         E + IF  I+   +      +  +    T
Sbjct: 70  MFRMKPDVFITFNNTLMENCGLKHSRYLSAYEQVAIFLHIIAHGITSRVAAEKFQHSGET 129

Query: 136 STLRGHDYVK-VCQLGTKIICPLELDNVPPEIMFKSKYYPFFKDCVGTIDGTNISASIPQ 195
            +   H  +K +C+LG +II P   D VPPEI+   KYYPFFKDC+G IDGT+I A IP 
Sbjct: 130 ISKVFHRVLKAICKLGVEIIAPPNFDEVPPEILHNPKYYPFFKDCIGAIDGTHIEACIPI 189

Query: 196 HEQIPYRGKKTNPTWNVMCLCSFDMRFTFVMSGWEGTENNFRIFLECIRDPANKFPIPTR 241
            +QIPYRGKK  PT NV+  CSFD+ FTFVM GWEGT N+ RIF ECI +P NKFP+P  
Sbjct: 190 PQQIPYRGKKVEPTQNVIAACSFDLCFTFVMCGWEGTANDSRIFFECITNPENKFPMPVG 249

[Close]

BLAST of Lcy10g006970 vs. NCBI nr
Match: KAG8372299.1 (hypothetical protein BUALT_Bualt12G0051800 [Buddleja alternifolia])

HSP 1 Score: 177.6 bits (449), Expect = 1.6e-40
Identity = 98/245 (40.00%), Postives = 141/245 (57.55%), Query Frame = 0


Query: 16  DLLEEEEEYEDEDLLIFFRLL-REELHKTQMLRQPYRTSTLTGHDYVVLIMDCSEAR--- 75
           D++EE E+ E++ +++F  L   EE  +  +L+ P R S ++GH YV+ +M+ +  R   
Sbjct: 10  DIIEELEQIEEDVMMMFLMLFCFEEYERLYLLKTPCRNSKMSGHAYVMELMNANPTRCYD 69

Query: 76  ---------LLSNNDVMD---LLEEEEEYEDEDLLIFFRILREELHK---TQMLRQPCRT 135
                    +  +N ++D   L         E + IF  I+   +      +  +    T
Sbjct: 70  MFRMKPDVFITFSNTLIDKCGLKHSRYLSAYEQVAIFLHIIAHGIMSRVAAEKFQHSGET 129

Query: 136 STLRGHDYVK-VCQLGTKIICPLELDNVPPEIMFKSKYYPFFKDCVGTIDGTNISASIPQ 195
            +   H  +K +C+LG +II P   D VPPEI+   KYYPFFKDC+G IDGT+I A IP 
Sbjct: 130 ISKVFHRVLKAICKLGVEIIAPPNFDEVPPEILHNPKYYPFFKDCIGAIDGTHIEACIPI 189

Query: 196 HEQIPYRGKKTNPTWNVMCLCSFDMRFTFVMSGWEGTENNFRIFLECIRDPANKFPIPTR 241
            +QIPYRGKK  PT NV+  CSFD+ FTFVM GWEGT N+ RIF ECI +P NKFP+P  
Sbjct: 190 PQQIPYRGKKVEPTQNVIAACSFDLCFTFVMCGWEGTTNDSRIFFECITNPENKFPMPVG 249

[Close]

BLAST of Lcy10g006970 vs. NCBI nr
Match: KAG8371481.1 (hypothetical protein BUALT_Bualt13G0092200 [Buddleja alternifolia])

HSP 1 Score: 176.8 bits (447), Expect = 2.8e-40
Identity = 98/245 (40.00%), Postives = 140/245 (57.14%), Query Frame = 0


Query: 16  DLLEEEEEYEDEDLLIFFRLL-REELHKTQMLRQPYRTSTLTGHDYVVLIMDCSEAR--- 75
           D+ EE E+ E++ +++F  L   EE  +  +L+ P R S ++GH YV+ +M+ +  R   
Sbjct: 10  DIFEELEQIEEDVMMMFLMLFCFEEYERLYLLKTPCRNSKMSGHAYVMELMNANPTRCYD 69

Query: 76  ---------LLSNNDVMD---LLEEEEEYEDEDLLIFFRILREELHK---TQMLRQPCRT 135
                    +  +N +M+   L         E + IF  I+   +      +  +    T
Sbjct: 70  MFRMKPNVFITFSNTLMENCGLKHSRYLSAYEQVAIFLHIIAHGITSRVAAEKFQHSGET 129

Query: 136 STLRGHDYVK-VCQLGTKIICPLELDNVPPEIMFKSKYYPFFKDCVGTIDGTNISASIPQ 195
            +   H  +K +C+LG +II P   D VPPEI+   KYYPFFKDC+G IDGT+I A IP 
Sbjct: 130 ISKVFHRVLKAICKLGVEIIAPPNFDEVPPEILHNPKYYPFFKDCIGAIDGTHIEACIPI 189

Query: 196 HEQIPYRGKKTNPTWNVMCLCSFDMRFTFVMSGWEGTENNFRIFLECIRDPANKFPIPTR 241
            +QIPYRGKK  PT NV+  CSFD+ FTFVM GWEGT N+ RIF ECI +P NKFP+P  
Sbjct: 190 PQQIPYRGKKVEPTQNVIAACSFDLCFTFVMCGWEGTANDSRIFFECITNPENKFPMPVG 249

[Close]

BLAST of Lcy10g006970 vs. NCBI nr
Match: TYK06269.1 (protein ALP1-like [Cucumis melo var. makuwa])

HSP 1 Score: 174.1 bits (440), Expect = 1.8e-39
Identity = 72/115 (62.61%), Postives = 95/115 (82.61%), Query Frame = 0


Query: 126 KVCQLGTKIICPLELDNVPPEIMFKSKYYPFFKDCVGTIDGTNISASIPQHEQIPYRGKK 185
           KVC+LG +II P  +D V  +I+  SKYYPFFKDC+G IDGT+++ASIPQ+EQIP+RG+K
Sbjct: 41  KVCKLGGEIIRPPNMDTVATKIVSNSKYYPFFKDCIGAIDGTHVAASIPQNEQIPFRGRK 100

Query: 186 TNPTWNVMCLCSFDMRFTFVMSGWEGTENNFRIFLECIRDPANKFPIPTREIFLI 241
           TN TWN+MC+CSFDM FT+VMSGWEG+ N+ RI  ECI++P NKFP+P R+ + +
Sbjct: 101 TNTTWNIMCVCSFDMLFTYVMSGWEGSANDSRILQECIKNPENKFPMPKRDQYYL 155

[Close]

BLAST of Lcy10g006970 vs. NCBI nr
Match: KAG8377899.1 (hypothetical protein BUALT_Bualt08G0081500 [Buddleja alternifolia])

HSP 1 Score: 173.3 bits (438), Expect = 3.1e-39
Identity = 97/245 (39.59%), Postives = 138/245 (56.33%), Query Frame = 0


Query: 16  DLLEEEEEYEDEDLLIFFRLL-REELHKTQMLRQPYRTSTLTGHDYVVLIMDCSEAR--- 75
           D++EE E+ E++ +++F  L   EE  +  +L+ P R S ++GH YV+ +M+ +  R   
Sbjct: 10  DIIEELEQIEEDVMMMFLMLFCFEEYERLYLLKTPCRNSKMSGHAYVMELMNANPTRCYD 69

Query: 76  ----------LLSNNDVMDLLEEEEEYED--EDLLIFFRILREELHK---TQMLRQPCRT 135
                       SN  +     +   Y    E + IF  I+   +      +  +    T
Sbjct: 70  MFRMKPDVLITFSNTLIEKCGLKHSRYLSAYEQVAIFLHIIAHGITSRVAAEKFQHSGET 129

Query: 136 STLRGHDYVK-VCQLGTKIICPLELDNVPPEIMFKSKYYPFFKDCVGTIDGTNISASIPQ 195
            +   H  +K +C+LG +II P   D VPPEI+   KYY FFKDC+G IDGT+I A IP 
Sbjct: 130 ISKVFHRVLKAICKLGVEIIAPPNFDEVPPEILHNPKYYQFFKDCIGAIDGTHIEACIPI 189

Query: 196 HEQIPYRGKKTNPTWNVMCLCSFDMRFTFVMSGWEGTENNFRIFLECIRDPANKFPIPTR 241
            +QIPYRGKK  PT NV+  CSFD+ FTFVM GWEGT N+ RIF ECI +P NKFP+P  
Sbjct: 190 PQQIPYRGKKIEPTQNVIAACSFDLCFTFVMCGWEGTANDSRIFFECITNPENKFPMPVG 249

[Close]

BLAST of Lcy10g006970 vs. TAIR 10
Match: AT5G28950.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41980.1); Has 448 Blast hits to 446 proteins in 74 species: Archae - 0; Bacteria - 0; Metazoa - 31; Fungi - 21; Plants - 396; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 89.0 bits (219), Expect = 7.1e-18
Identity = 33/94 (35.11%), Postives = 61/94 (64.89%), Query Frame = 0


Query: 143 VPPEIMFKSKYYPFFKDCVGTIDGTNISASIPQHEQIPYRGKKTNPTWNVMCLCSFDMRF 202
           VP +I   ++ YP+FKDCVG ID T+I A + Q +   +R +K + + N++  C+FD+ F
Sbjct: 8   VPRKIRESTRLYPYFKDCVGAIDDTHIFAMVSQKKMPSFRNRKGDISQNMLAACNFDVEF 67

Query: 203 TFVMSGWEGTENNFRIFLECIRDPANKFPIPTRE 237
            +V+SGWEG+ ++ ++  + +   +N+ P+P  +
Sbjct: 68  MYVLSGWEGSAHDSKVLNDALTRNSNRLPVPEED 101

[Close]

BLAST of Lcy10g006970 vs. TAIR 10
Match: AT5G41980.1 (CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 70.9 bits (172), Expect = 2.0e-12
Identity = 30/87 (34.48%), Postives = 51/87 (58.62%), Query Frame = 0


Query: 155 PFFKDCVGTIDGTNISASIPQHEQIPYRGKKTNPTWNVMCLCSFDMRFTFVMSGWEGTEN 214
           P+FKDCVG +D  +I   +   EQ P+R      T NV+   SFD+RF +V++GWEG+ +
Sbjct: 138 PYFKDCVGVVDSFHIPVMVGVDEQGPFRNGNGLLTQNVLAASSFDLRFNYVLAGWEGSAS 197

Query: 215 NFRIFLECIRDPANKFPIPTREIFLIE 242
           + ++ L       NK  +P  + ++++
Sbjct: 198 DQQV-LNAALTRRNKLQVPQGKYYIVD 223

[Close]

BLAST of Lcy10g006970 vs. TAIR 10
Match: AT1G43722.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G28730.1); Has 924 Blast hits to 912 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 222; Fungi - 31; Plants - 661; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 63.9 bits (154), Expect = 2.4e-10
Identity = 27/102 (26.47%), Postives = 53/102 (51.96%), Query Frame = 0


Query: 139 ELDNVPPEIMFKSKYYPFFKDCVGTIDGTNISASIPQHEQIPYRGKKTNPTWNVMCLCSF 198
           EL  +P  +    +Y+P+F   VG +DGT++   +    Q  Y  +  N + N+M +C  
Sbjct: 155 ELYRIPERLQVDQRYWPYFSGFVGAMDGTHVCVKVKPDLQGMYWNRHDNASLNIMAICDL 214

Query: 199 DMRFTFVMSGWEGTENNFRIFLECIRDPANKFPIPTREIFLI 241
            M FT++ +G  G+  +  + L+  +   ++FP+P  E + +
Sbjct: 215 KMLFTYIWNGAPGSCYDTAV-LQIAQQSDSEFPLPPSEKYYL 255

The following BLAST results are available for this feature:

BLAST of Lcy10g006970 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy10g006970 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C7F6	8.7e-40	62.61	Protein ALP1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold157G00...	[more]
A0A5A7VNL5	4.9e-35	63.37	Putative nuclease HARBI1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6...	[more]
A0A5D3DC11	8.4e-35	62.38	Protein ALP1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold392G00...	[more]
A0A1S4E0U9	2.3e-32	61.39	uncharacterized protein LOC103496041 OS=Cucumis melo OX=3656 GN=LOC103496041 PE=...	[more]
A0A4Y7J673	5.1e-32	35.25	Uncharacterized protein OS=Papaver somniferum OX=3469 GN=C5167_014815 PE=3 SV=1	[more]

BLAST of Lcy10g006970 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG8363101.1	4.3e-41	40.41	hypothetical protein BUALT_BualtUnG0004500 [Buddleja alternifolia]	[more]
KAG8372299.1	1.6e-40	40.00	hypothetical protein BUALT_Bualt12G0051800 [Buddleja alternifolia]	[more]
KAG8371481.1	2.8e-40	40.00	hypothetical protein BUALT_Bualt13G0092200 [Buddleja alternifolia]	[more]
TYK06269.1	1.8e-39	62.61	protein ALP1-like [Cucumis melo var. makuwa]	[more]
KAG8377899.1	3.1e-39	39.59	hypothetical protein BUALT_Bualt08G0081500 [Buddleja alternifolia]	[more]

BLAST of Lcy10g006970 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G28950.1	7.1e-18	35.11	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G41980.1	2.0e-12	34.48	CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (Int...	[more]
AT1G43722.1	2.4e-10	26.47	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR22930	UNCHARACTERIZED	coord: 138..229
None	No IPR available	PANTHER	PTHR22930:SF212	NUCLEASE HARBI1 ISOFORM X1-RELATED	coord: 138..229

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy10g006970.1	Lcy10g006970.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding