Lcy10g006830 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy10g006830
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2
Location	Chr10: 27892245 .. 27901305 (+)
RNA-Seq Expression	Lcy10g006830
Synteny	Lcy10g006830

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGGAGGGTGCGGGTTCATTCGTCTGAGTTAGCGAGACTTCATTTGATTCACGAACAGCGAGGGAGGGAGAAATGGCTTGGAGAGGACAGCTATCCAAGAATTTGAAGGAGCTTCGAATCTTGCTCTGCCAAACCTCTCCTTCGAGCGCCCCTGCTAGGTATTCCTTTTCTGCTTTCTTTTACGTTTTACGATCCCTTCCAAAACTACAAATCGTGCTCCCGGAACTTCTTTTCAGAGATTGTTGATTAAAGGAGTTTTGGCTCTGACAGGGCATTTGTGGAAAAGAATTACAAGGACCTCAAGACTTTGAATCCCAGATTTCCTATATTGATCCGCGAATGCAGTGGAATCGAGCCGCAACTATGGGCTAGATACGGTACTTCAATGCCCACTTCCCACCAAATGATTTCATTTCGTTTTGTTTTCTTCACTCAATGTTTCGAGATTCATTACTGAACTATATGGCGGAAAGGATTTTGCTGCTATACTAGAATTGATTGATGAGCGCGATTGGTAGTATCAAATAATCTGCTCCGGTAGTCTTTCTTTGACATCGATTATTACTTTCGTTGTCTATTAGTGATGGAAAGTACTCTTTCCATGGTAGATAGTCAGGTCATAGTATTTTGAAGGCTCCATTTCCACGGAAGTAGGAAATGACCATCTAATCGAATTCGTTCTGGGTTTATTTCGTCATACTTTGCCATTTTCTTTTATTTTGTTTTGTGAGCTGTGAAATTTGACTGGCCCTTTGGTTTCTTATCCAAAAATGAAATCAAGTAATATAAAAATCGACTGCTCCTGATATACAATCTGCTCCTACGCTGACATCTTCGTCTTAACTTCTAAATGAAGGAGAAATTAGTAGCCATGGGAATTTCACTGTGTCTCATTTTCCCTTGACTGCCATTCATCCTTGAGAGAAAATATATAGTTAAGAAGAACTGTTTTTACTTTTTGTGTGGCTGATCTTTCAAGTGGGACACTCATGAGTAGAACTAGTAATGATACAAATTTTTAGCCGCTTACAAATGCAAGGATGGATTCGCTTCTTGGTTAACTCTTTTTTTTTTTTTTTTTCAGTTTAAATTATTTCTTTTTGTCTTTGACTTTCAAATTTTTTAATTGCATGTGCTCGATAGGTAGCATTGTGGTGGTAACATAATACCTTCTCATATTAAGAGATTATATTAAGTTCTTCACATCAATGTTATCTAAAATATACTTATAAATATGTGTGATAAGAAATCATGAAATTATTCAGATTCCCATTCCTCGACCGACACTTGTGAAGATTATAGAGTAGTTACAATCAACAAGTTTTTTCAATGATGAATAGTGATTATTATTAACTTTTTGGTGGCAATGGAACCTTAACCGTAAATTTTCTTTTAAAATATCATTATAATTTCTTATTCATGTTCATTTTGCGCATTTCAATATCTGATGGATGGGATAATAAGATACAAAAGTTGTTATGTTAACTGAGATTAATTATGGAAAAAATTTCATTGTACACCGATCGAGATCATTAATTGAAATTTGAAATTTGATGTTTACATTCCAATTATTTGTTACAATGAAATCATATTTTGCAGCTTTGCTTTTGTATGAATCCCATTGCTTCATGATAATGATATAAGTTTTTCGCTTACGATCTCAGGTTTTTTTTTAATGTTAGCTTTGCTCAATATCTATATTAAAATCCTTTGAGTATTTCACTTTTATTCTTTTCTTTTTTTTTATTTTTTTTTAATTACAGATGATCAATTTATTTGACTTAATGTTTTTCCTTTAGGAGAAACCGAGTCTTGATTGAGAGAAATGAAAGAATATGGAAGAACATACAAAAAAAACCAGTCCCTCAAAAAGGAATCCTAACACTAACTAAGAAAAAGACTCCAATCCAAAAGAATAAAGTCTAACTGATAATTGCAAAAAACTGGAGAGATCGAAATCCACAATGAGGTATTAAAATGAACAATATCCCAAACTTCACTTGTGGATCTCTCCATATCCCTTAAAATCCTACTATTCCCTCAAGCCAAAGCTCCTAAAATACACATCTACCATAGAACTTTGCCTTTATCCCAAAAAGGGGGATTCTAAAGGAAAGTCTCAAGTGCTAAAGTGGTACTGGTAATTCTATGGAAGAGATTTTGGCATCTCAAGTGCTAAAGTGGTACTGGTGAACAACCCTCTCTCCGTTCATTATAAATTAAGAAGTTAAACTTCCCTTTGATGCCCATATTTCCTATAAAGTTGAGTTTTTTATGCTTTTCCGGCCAGGATGGTGATTTGAATTTGATGCAAATTCATGGTTGAGTTCTCAAACACCCATAAACATTCTTCAGGAGCATTGAGATCTCAAGAAAATACTATAGATGGAAACAATGCAGGCTAGAGCAGTTGAAGAATGCATGAATTATGGAGCTCCAAAGGAGTTGTGAACTTGAGTTTGATGAATATGATAAGTTGAGATATTTTAGTTTCAGGAAAAAAAAAAAACAAGAAAAATAAAAAAGCAGACATACTTTGTCAAACATCTGTTAACAATTTTTTGTGATTATTTTGTTGAGGAAAATGATCTTCAGGAGGAATATGGATAGATGATGAAGTAAAAATTTCTTTGAACTTGGATATCCTTAGATATACCAAAACTAATAGATAGAGAATGCTCAAACGATAGAGCCATCGGGGCAGCAAAGGCAAAGGTAAAGCCGAAGATCCATGGGGCAGGAGGAATGGATAGGGATGAAAAAAGACTTCCTGTGAACTTCGGGGAAATGAAGATATTGAGATCTTACCTTCAATTTTATTGGGAGTGTTAATGATTCCTATTAGTGGCTCCCAAATAAAAATTTTGAACTTCTTTTGATATCTATTTCTATCCTTCCATGCAAATTTTGGGTCTAAGGATTCTAGAGTCCATTATGACGTCATTCAAAAGAGATTTGCAGCCAAATGAGCTGATTCATAAAGCCACGACCACTTGTCTTCCACAGGCCTAAGTATGGATTTAACAAGTATCAAAACAGAGAGGTAAAAATGTGGATTCTCTCTTATTAATTGAAATAAGACCCTTAGGGCTTTATATATACAAGCAATAAACTGAGAGAACTTAAATAACCGGAGATGCAGTTATAACAGATATATAACTCAACTAATAACAGCCATAGTTAAGTAACATAACCCAATACACCCCCCTCAAGATGGACCATGTATATTAAAAATACCCATCTTGACTAGAAATTGTTGAAGAGCTGAGGAGGGCAAAGCCTTTGTGAACATATCTGCCAGTTGAGAAGAAGATCAAATTGGAAGAAGCCGTAGTACACCTCGTTGTATCAAATCACGAATAAAGTGACAATCAATTTCTATGTGCTTGGTCCTTTCATGAAATGTCGGGTTATTGGCTACAAAAATAACAACATGGTTGTCATGATAGACAACTACAGGAGAGGAAGAAGGAAGTTGTAAATCAGTAAGCAAATGAGATAGCCAAGGGAGCTCGCTAGAAACACTTGCTAAGATATGATATTCAACTTCAACCGAAGAATGGGAAACAGTAGCCTATTTCTTATATTTCCAAGACACGAGAGTCACCCAAAAAGACACAAAAACCAGTGATTGAACGCCTAGTGTCTTGACAAGAACCTTAGTCAGAATCAACAAAATCCTTTAGCGAAAATCCTTGGAAGCATGAAGCATGATACCTTGTCCTACTGTTCCTTTCAAATAACGAAGTAAATGATGCAAAGTAGATTAATGGTCATTACAAGGTTTTGCCAAATATGACTAAACTTGTGTATAGTGAAAGAAATATCAAGCTTGGAGATTTGTAAATATAATAAACGCCCAATAAGAGGCCTATAAAGATTAGTATCCCAAAGATTCACCAGAATTATCAGTTGATAACTGAAGATTCGAGGCCATAGGATGAGATACTGGTTTAGCGACTAGAAAACTAGAGTCTTCAAGAATTTGTAAGCAATATTTATGTGGAGACAAGTAAATTCCCTTGGAAGACCTGGATAGTTCAAGACCAAGAAAAAACTTTGCATTTATGAGATCCTTTAATAAGAAATTGGCACAAAGAAACGATTTAATAGTATCAATTTCAATAGGGGAAGGACCCGTCACAAGGATATCATCACATATACTAATAATGCAACAAATGAAGTACCCGAACCCTTAGTAAAAAGGGAATAATCTGCTTTGGATTGAGAAAATCCGTTAGCAAGAAGAACACCAGAAAACTTGGAGAACCATTGTCTTGAGGCTTGTTTGAGACCATAAATCGATTTATGTAACTTGCAAACAAGAGGGGCTTGTGGATGATTTATGATTGGTGTAATAACCCAAAGGTAACAACATATACACCTCTTCAAATAAATCACCATTAAGAAAAACATTATTGATATCCATTTGTATAAGAGGCCAACCATAAGAAGCGGTCAAGGAAAGCAAAACTTTTACAGTAACAATCTTGGCTACCAGGGAAAAAGTATCAATAAAATCAATACCTTCCTGCTGATTATATATCCCTTTGCAATGAGCCGAGCTTTATAGCGAACAACCATATCATCTCCCTTGTACGTTTCGATAAACCCATTTCCAACCTATGGCATGATGACCATCGGGCAGAGGAACCACACTCCAAGTATTGGTGCATTCCATGGCTGATATTTCTTCAGCCATAGCCTGCCTCCATGAAGCAAATTTAACCGCCTGGTGATAATAAGAGAGCTCAAAATCTGTTGACACATTAAAGAGAAAGTGTTGATGAGCATTAGATAATTGGTCACAAGACAAGTGTTTAGCAAGCTTATCCACTGGAGGAGAGTTGTGAAATAAATGGCAGTGACAATCCTTCAGAAAACATGGAGGATGATGTTGCCGGCAAGGAGGAGCCGTGACTAATGCATCAGGGACAGCTGAAATAGGATAAGTAACATCAGCACCCTCGGTAAAAGAATCAGCAACAGAACCACTGGGAATAGTGGCATTAGATCCTTCATGAACAGGTCCAATTGAAGCATTTGGCATTGAAGAGATAGCCTCACCAGTAGCTTCAATTGAATCATTATTAATAGGCAATCCAGTAGCTTCAGTATTAAAAGGAATATCCATAGCTGCCATTGGAAGAACTAAATGAGGAAAAAGGTCATCAACAGCATCAGTAGTAATGAAATAATCTGCTTTGGATTATCCATATTTAGCATTGGAAGAACTAAATGAGGAAAAAAGTCATCTAACAGCATCAAAAAATACAACATCCCGAGAAATAAAGATACGTTGCTTGGAAATATCATATAAACGATATCCCTTTACACCGGCAAGATAACCAAGAAAACACACAAGCCCGTGCACGTGGATCAAACTTGGTACGATGAGCAACAAGAGTGGATGCATAGTAAAGACAACCAAACACTCTTAAAGTAGAGTAGTCAAAATCAGCATTGTACAGAACAGTAAATGGTGTGTTAGATAGCAGAGGCATTGGAGTTCTCTTTATTATATAAGCAATAGTAAGAACACAGTCTCTCCAAAAACGTAACTGTATATGAGATTGGAAAAACATTGCTCATGCAACGTTCAAAAGATGCTTATGCTTGCACTCTACTACAGAATTTTGCTGAGGTATTTCAACACAAGAAAACTGATGAACGGTCCCTTTGGTGGCAAAGAAATCAATAAATTGTAACTCCAGGACATTGTCGATGGACAATAGTAAGTGCATCAAGTTTATTACGCATAGGATAGATCCAAGTAAAACGGGAAGAATCATCAACTAATGTCAAGAAAAAGCGATGACCAGCATAAGTTGGCGTTTTCAAGAGACCCCATATATTAGCATGAATCAAATCAAAAGTATTATTTGCAACATTATTATGAAATGTAAATGACAAACATGACATGGAGAAGTATGGAGTAAGGGATTTAAAAAAAAAAGTATGGAGTAAGGAATCAGACAAAGATAAAGTGTTCTTCAACGAAGATAAGCATTTGGACGATAAATGTCCTAAACGATGATGCCAAGTAGTGGTTGAAATTGAGCAAACCGAGGCTTGAGCGCCTTAAAAAATTCATCTGGTACTAGCAAATATAGGCCATTCAAGCATTCAGCCTTGCCAATCGTCGTCAATAGAGATTTTTCCTGTATAAGACAATATTTTCCACAAAAATTTATAGACAGAATTTGTCATCAATAGGTAGCTCACAGAGATTAGATCGTATGTGAATTCAGGGACAAAAAGAACATCATTAAGTAGTAGAGTGGCATTAATTTGAATATCCCCAACAAAATCAACACAAACTCTATATGTAGTTGGCAAAACAACAATCATAGTATCAAATGCGACGTCAATTGTGAAAAAGATGACGACCATGGCAAATATGATGAGAGTGCCAAGAATCGACAATCCAACAATCAGTAATGGATCCAATAGAAGAGGAAGTAGAAGAACAAATACTTGTAGCATGTGTGCAGTAGAAGCCACAATAACAGGTTCAGATTTAGCAGTCTGAAGATGTGAATTAAGCAAATTAAGCAAATCCATTAACTGAGAATTTTGAGTAGAATTCAAGCTTGAAAAAAAATTCGGAGATAGAGGATGAAGCTTCAGGTGCCGTCGAAGAATGAGGCTTGTAACTAGGGGGATAACCGTGCAATTTGTAACATCGGTCAATAACAAAGCCACGAATTCCACAATGAGTACAAATTTGTGTTGATTCGAAGTCTCTTTCTTGCGAGAACGATCAGTAGGTGAAGAAGTCTTTTTGGTATTATCAACAGCAAAAAGAGTAACTGGATCTGGGGGAAGACTAAGAATACCAGCAGAGTGTTGATGTTCCTCTTAGATTATGAGAGAAAAAACAGTATTAACGTAGGAATCAATTTCATAAGGAGACAGGAGCATATGACTCATTTAATCCCATCAAGAAAGTCATGACATATTTAGAATCAAGATGCTCGATAAATGGCTTCAAACCGTCGCAAGTACACTCTGTAGTTGGCCTGTAATCAGTAAGATCTTGCAAATTGTTTTGAGTTTAGTGTTATAAGTCTCAACTGACATGATACCTTGTTGCAGTGTGACCAATTTCTTACGCATTTGGTAAATACTGGGGCCATTCAAATGCTTGAATTGATCGCACAATTCATCCCAAACTTCTTTGATAGATCCCTTATACACAACACTCGCGACAATATCCTTAGAAACCGAATTAAGAATCTAGGATGCAATGATATCATTGTTGCATTCCTAAGCCTCAAGTAAGGTTTCTTCAGTAGGTTTGGTGATCTTATTAGTTATTATGAAACCAGTCTTGTTCTTCCCCGATATGACCATACGCATTGCACGACTCCATGAAGTATAGTTAATCGTGCCAAGTAAAGGCTGAGTGACTGACGTAGAAGAAGATCCAAAGGAATGATGAAGAAAATAAGGATTCAACTGTCCCTCAATCGCTGTTGTAGTATCATCGCTTCCAATGCCCTTGTCCACCATGAGAGAAGTGAAACTTGGAAGAAGGTAGGAATGAAAAAGGAAAAGAGTAGGAGGCAGGATTGAAAAAGGAAAAACGGGAGGCAGGATCGAAAAAAGAACAAGAGCGAGAGCGAAAAAATTATGGCTAATGATACCATACAAAAGAGAGAGGTAAAAATGTAGATTCTCTTATTAATTGAAATAAGACCCTAGGGCTTCATATATACAAGCGATAAACTCAGAGAACTTAAATAACTGGAGATGCAGTTGTAAAAAATATATAACTCAACTAATAACAACCCTGGTTAAGTAACATAACCCAATAACAAGGGTATCCATAAGAGTAAGAGAAATTCATTCTTGGAATTCCAAATCATTAAGGTTTCTTCCATAGTTTAGGTCCCAAGAAGATTAGGTGGAATTCCAAACTTTAATTGCAGGAAAGCGTTTGAAACAACATATAATCAAGAGAAAAGGGCAGAGAGAGCTATAGTACCCCTCCAAGGGTTTTCTCAGTGCCTTTCATATTAGTTGCTCTTGAAGTCAATACTTCTTTCAGTTCGAAAGTGGCTTTCTAAGGGGTCTTTAGTTGTTTTGGTGGCAGCTTGACTGATCCACCAATCACCTTTGGAAACTCCATATTGTTTTTGCTAATTATCAATCTATTCATAAAGTTATGAATGGGCTTCAATGCCTATTGGACTTCAAAATTGTAGAAGAATGTAGAAGAGGCTGTAGAAGAGTGGAAAAGAGAAAAAAGAGGGGCTTCTTAGAGAAAGCTTTGTGACTATGGGGATGGACGCTGTTAAGAGAATGAAAGATTTGGTTTAAGATGGAGGTCATGGATTGGAAATTCTAACAAACAAACGTGGAGATTATCATCTGAAAATTGGAAGTGGAGGACATGCATTCTTTGCTCTTTAAACTATCTGGTTTTGGCCCAGTGGTCATAGGACAATTGGTGAACAATAATAGATGTTTCTTAAGAATGCTAATATCTCGCAAGTGTTTGACGTTAAATGTCATAAGATTAAATAACATTTTTTTTTGAAAGCTTGATTATGTGCTGAGATTTAGTGGATATGTGGTTGCAATATGCTTTATATTTTCGTTTTTGGTTAATGCAACTGATTATTTTTTCTTTTTGATCTGACAGACATGGGTGTTGAGAAAGTTGCTCGTCTAGATGGTTTGAGTGAGGCTCAGATCTCAAAGGCACTCGAAGACCTAGTTAAAGTTGGGGCATCCTGAAGGCGTAATGTGCTGTGCTGTTGTACTTGCAACAGACGTTAATAAATGCACAAGTGGAACTTCTGTTGAGATACTTTACTGTTTAGATTCTTTTCGCTCTGCTTTTTTGAGATTATTGCTCAAACATTCAGCTTGAGAAAACATGTTTCTGGTACGTATGTTTATTTGTTTATACGAATAGTTTCTCCGGGAGTTATTTTCATAATGGTCATAATGAGTTTCTCATTTTTCATAAAGAATCGACCGCATTAATTTCATAGAATTGGAGTTGGTAAACTTTTTTTTTTCTTCTTTTTCCTATCAAGGCTACGTTCTT

mRNA sequence

TGGGAGGGTGCGGGTTCATTCGTCTGAGTTAGCGAGACTTCATTTGATTCACGAACAGCGAGGGAGGGAGAAATGGCTTGGAGAGGACAGCTATCCAAGAATTTGAAGGAGCTTCGAATCTTGCTCTGCCAAACCTCTCCTTCGAGCGCCCCTGCTAGGGCATTTGTGGAAAAGAATTACAAGGACCTCAAGACTTTGAATCCCAGATTTCCTATATTGATCCGCGAATGCAGTGGAATCGAGCCGCAACTATGGGCTAGATACGACATGGGTGTTGAGAAAGTTGCTCGTCTAGATGGTTTGAGTGAGGCTCAGATCTCAAAGGCACTCGAAGACCTAGTTAAAGTTGGGGCATCCTGAAGGCGTAATGTGCTGTGCTGTTGTACTTGCAACAGACGTTAATAAATGCACAAGTGGAACTTCTGTTGAGATACTTTACTGTTTAGATTCTTTTCGCTCTGCTTTTTTGAGATTATTGCTCAAACATTCAGCTTGAGAAAACATGTTTCTGGTACGTATGTTTATTTGTTTATACGAATAGTTTCTCCGGGAGTTATTTTCATAATGGTCATAATGAGTTTCTCATTTTTCATAAAGAATCGACCGCATTAATTTCATAGAATTGGAGTTGGTAAACTTTTTTTTTTCTTCTTTTTCCTATCAAGGCTACGTTCTT

Coding sequence (CDS)

ATGGCTTGGAGAGGACAGCTATCCAAGAATTTGAAGGAGCTTCGAATCTTGCTCTGCCAAACCTCTCCTTCGAGCGCCCCTGCTAGGGCATTTGTGGAAAAGAATTACAAGGACCTCAAGACTTTGAATCCCAGATTTCCTATATTGATCCGCGAATGCAGTGGAATCGAGCCGCAACTATGGGCTAGATACGACATGGGTGTTGAGAAAGTTGCTCGTCTAGATGGTTTGAGTGAGGCTCAGATCTCAAAGGCACTCGAAGACCTAGTTAAAGTTGGGGCATCCTGA

Protein sequence

MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKDLKTLNPRFPILIRECSGIEPQLWARYDMGVEKVARLDGLSEAQISKALEDLVKVGAS

Homology

[Close]

BLAST of Lcy10g006830 vs. ExPASy Swiss-Prot
Match: Q9FIJ2 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Arabidopsis thaliana OX=3702 GN=At5g47890 PE=1 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 9.6e-38
Identity = 71/95 (74.74%), Postives = 85/95 (89.47%), Query Frame = 0


Query: 1  MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKDLKTLNPRFPILIRECSGIEPQL 60
          MAWRG +SK++KELRILLCQ+SP+SAP R FVEKNYKDLK+LNP+ PILIRECSG++PQ+
Sbjct: 1  MAWRGSISKSMKELRILLCQSSPASAPTRTFVEKNYKDLKSLNPKLPILIRECSGVQPQM 60

Query: 61 WARYDMGVEKVARLDGLSEAQISKALEDLVKVGAS 96
          WARYDMGVE+   LDGL+E QI KALE+LVK GA+
Sbjct: 61 WARYDMGVERCVNLDGLTEPQILKALENLVKSGAT 95

[Close]

BLAST of Lcy10g006830 vs. ExPASy Swiss-Prot
Match: P0CB79 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Pongo abelii OX=9601 GN=NDUFA2 PE=3 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 4.5e-19
Identity = 45/85 (52.94%), Postives = 59/85 (69.41%), Query Frame = 0


Query: 11  LKELRILLCQTSPSSAPARAFVEKNYKDLKTLNPRFPILIRECSGIEPQLWARYDMGVEK 70
           L+E+RI LCQ SP S   R F+EK Y +LK  NP  PILIRECS ++P+LWARY  G EK
Sbjct: 16  LREIRIHLCQRSPGSQGVRDFIEKRYVELKKANPDLPILIRECSDVQPKLWARYAFGQEK 75

Query: 71  VARLDGLSEAQISKALEDLVKVGAS 96
              L+  S  Q+++ALE+++K  AS
Sbjct: 76  NVPLNNFSADQVTRALENVLKPEAS 100

[Close]

BLAST of Lcy10g006830 vs. ExPASy Swiss-Prot
Match: P0CB80 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Pongo pygmaeus OX=9600 GN=NDUFA2 PE=3 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 4.5e-19
Identity = 45/85 (52.94%), Postives = 59/85 (69.41%), Query Frame = 0


Query: 11  LKELRILLCQTSPSSAPARAFVEKNYKDLKTLNPRFPILIRECSGIEPQLWARYDMGVEK 70
           L+E+RI LCQ SP S   R F+EK Y +LK  NP  PILIRECS ++P+LWARY  G EK
Sbjct: 16  LREIRIHLCQRSPGSQGVRDFIEKRYVELKKANPDLPILIRECSDVQPKLWARYAFGQEK 75

Query: 71  VARLDGLSEAQISKALEDLVKVGAS 96
              L+  S  Q+++ALE+++K  AS
Sbjct: 76  NVPLNNFSADQVTRALENVLKPEAS 100

[Close]

BLAST of Lcy10g006830 vs. ExPASy Swiss-Prot
Match: Q02370 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Bos taurus OX=9913 GN=NDUFA2 PE=1 SV=2)

HSP 1 Score: 93.2 bits (230), Expect = 1.7e-18
Identity = 45/87 (51.72%), Postives = 60/87 (68.97%), Query Frame = 0


Query: 4  RGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKDLKTLNPRFPILIRECSGIEPQLWAR 63
          RG+L   L+E+RI LCQ SP S   R F+EK Y +LK  NP  PILIRECS ++P+LWAR
Sbjct: 11 RGKL--GLREIRIHLCQRSPGSQGVRDFIEKRYVELKKANPDLPILIRECSDVQPKLWAR 70

Query: 64 YDMGVEKVARLDGLSEAQISKALEDLV 91
          Y  G EK   L+  S  Q+++ALE+++
Sbjct: 71 YAFGQEKNVSLNNFSADQVTRALENVL 95

[Close]

BLAST of Lcy10g006830 vs. ExPASy Swiss-Prot
Match: Q4R5E2 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Macaca fascicularis OX=9541 GN=NDUFA2 PE=3 SV=3)

HSP 1 Score: 91.7 bits (226), Expect = 4.9e-18
Identity = 42/80 (52.50%), Postives = 56/80 (70.00%), Query Frame = 0


Query: 11 LKELRILLCQTSPSSAPARAFVEKNYKDLKTLNPRFPILIRECSGIEPQLWARYDMGVEK 70
          L+E+RI LCQ SP S   R F+EK Y +LK  NP  PILIRECS ++P+LWARY  G EK
Sbjct: 16 LREIRIHLCQRSPGSQGVRDFIEKRYVELKKANPDLPILIRECSDVQPKLWARYAFGQEK 75

Query: 71 VARLDGLSEAQISKALEDLV 91
             L+  S  Q+++ALE+++
Sbjct: 76 NVPLNNFSADQVTRALENVL 95

[Close]

BLAST of Lcy10g006830 vs. ExPASy TrEMBL
Match: A0A5A7T2I6 (NADH dehydrogenase (Ubiquinone) 1 alpha subcomplex subunit 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1593G00030 PE=3 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 3.2e-44
Identity = 90/95 (94.74%), Postives = 95/95 (100.00%), Query Frame = 0


Query: 1  MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKDLKTLNPRFPILIRECSGIEPQL 60
          MAWRGQLSKNLKELRILLCQ+SPSSAPARAFVEKNYKDLKTLNP+FPILIRECSGIEPQL
Sbjct: 1  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQL 60

Query: 61 WARYDMGVEKVARLDGLSEAQISKALEDLVKVGAS 96
          WARYDMG+E+VARL+GLSEAQISKALEDLVKVGAS
Sbjct: 61 WARYDMGIERVARLEGLSEAQISKALEDLVKVGAS 95

[Close]

BLAST of Lcy10g006830 vs. ExPASy TrEMBL
Match: A0A1S3CN67 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Cucumis melo OX=3656 GN=LOC103502835 PE=3 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 3.2e-44
Identity = 90/95 (94.74%), Postives = 95/95 (100.00%), Query Frame = 0


Query: 1  MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKDLKTLNPRFPILIRECSGIEPQL 60
          MAWRGQLSKNLKELRILLCQ+SPSSAPARAFVEKNYKDLKTLNP+FPILIRECSGIEPQL
Sbjct: 1  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQL 60

Query: 61 WARYDMGVEKVARLDGLSEAQISKALEDLVKVGAS 96
          WARYDMG+E+VARL+GLSEAQISKALEDLVKVGAS
Sbjct: 61 WARYDMGIERVARLEGLSEAQISKALEDLVKVGAS 95

[Close]

BLAST of Lcy10g006830 vs. ExPASy TrEMBL
Match: A0A6J1F628 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like OS=Cucurbita moschata OX=3662 GN=LOC111442457 PE=3 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 4.2e-44
Identity = 89/95 (93.68%), Postives = 95/95 (100.00%), Query Frame = 0


Query: 1  MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKDLKTLNPRFPILIRECSGIEPQL 60
          MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYK+LKTLNP+FPILIRECSG+EPQL
Sbjct: 1  MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKELKTLNPKFPILIRECSGVEPQL 60

Query: 61 WARYDMGVEKVARLDGLSEAQISKALEDLVKVGAS 96
          WARYDMG+E+VARL+GLSEAQISKALEDLVKVGAS
Sbjct: 61 WARYDMGIERVARLEGLSEAQISKALEDLVKVGAS 95

[Close]

BLAST of Lcy10g006830 vs. ExPASy TrEMBL
Match: A0A0A0LDA2 (L51_S25_CI-B8 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G845450 PE=3 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 9.3e-44
Identity = 89/95 (93.68%), Postives = 95/95 (100.00%), Query Frame = 0


Query: 1  MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKDLKTLNPRFPILIRECSGIEPQL 60
          MAWRG+LSKNLKELRILLCQ+SPSSAPARAFVEKNYKDLKTLNP+FPILIRECSGIEPQL
Sbjct: 1  MAWRGKLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQL 60

Query: 61 WARYDMGVEKVARLDGLSEAQISKALEDLVKVGAS 96
          WARYDMG+E+VARL+GLSEAQISKALEDLVKVGAS
Sbjct: 61 WARYDMGIERVARLEGLSEAQISKALEDLVKVGAS 95

[Close]

BLAST of Lcy10g006830 vs. ExPASy TrEMBL
Match: A0A6J1DEP8 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Momordica charantia OX=3673 GN=LOC111020121 PE=3 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.2e-43
Identity = 89/95 (93.68%), Postives = 94/95 (98.95%), Query Frame = 0


Query: 1  MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKDLKTLNPRFPILIRECSGIEPQL 60
          MAWRG LSKNLKELRILLCQTSPSSAPARAFVEKNYKDLK+LNP+FPILIRECSG+EPQL
Sbjct: 1  MAWRGHLSKNLKELRILLCQTSPSSAPARAFVEKNYKDLKSLNPKFPILIRECSGVEPQL 60

Query: 61 WARYDMGVEKVARLDGLSEAQISKALEDLVKVGAS 96
          WARYDMGVE+VARL+GLSEAQISKALEDLVKVGAS
Sbjct: 61 WARYDMGVERVARLEGLSEAQISKALEDLVKVGAS 95

[Close]

BLAST of Lcy10g006830 vs. NCBI nr
Match: XP_008465169.1 (PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Cucumis melo] >KAA0037682.1 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 2 [Cucumis melo var. makuwa])

HSP 1 Score: 187.2 bits (474), Expect = 6.6e-44
Identity = 90/95 (94.74%), Postives = 95/95 (100.00%), Query Frame = 0


Query: 1  MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKDLKTLNPRFPILIRECSGIEPQL 60
          MAWRGQLSKNLKELRILLCQ+SPSSAPARAFVEKNYKDLKTLNP+FPILIRECSGIEPQL
Sbjct: 1  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQL 60

Query: 61 WARYDMGVEKVARLDGLSEAQISKALEDLVKVGAS 96
          WARYDMG+E+VARL+GLSEAQISKALEDLVKVGAS
Sbjct: 61 WARYDMGIERVARLEGLSEAQISKALEDLVKVGAS 95

[Close]

BLAST of Lcy10g006830 vs. NCBI nr
Match: XP_022935669.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like [Cucurbita moschata] >KAG6581644.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018138.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 186.8 bits (473), Expect = 8.6e-44
Identity = 89/95 (93.68%), Postives = 95/95 (100.00%), Query Frame = 0


Query: 1  MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKDLKTLNPRFPILIRECSGIEPQL 60
          MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYK+LKTLNP+FPILIRECSG+EPQL
Sbjct: 1  MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKELKTLNPKFPILIRECSGVEPQL 60

Query: 61 WARYDMGVEKVARLDGLSEAQISKALEDLVKVGAS 96
          WARYDMG+E+VARL+GLSEAQISKALEDLVKVGAS
Sbjct: 61 WARYDMGIERVARLEGLSEAQISKALEDLVKVGAS 95

[Close]

BLAST of Lcy10g006830 vs. NCBI nr
Match: XP_038906356.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Benincasa hispida])

HSP 1 Score: 185.7 bits (470), Expect = 1.9e-43
Identity = 89/95 (93.68%), Postives = 94/95 (98.95%), Query Frame = 0


Query: 1  MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKDLKTLNPRFPILIRECSGIEPQL 60
          MAWRGQLSKNLKELRILLCQ+SPSSAPAR FVEKNYKDLKTLNP+FPILIRECSG+EPQL
Sbjct: 1  MAWRGQLSKNLKELRILLCQSSPSSAPARGFVEKNYKDLKTLNPKFPILIRECSGVEPQL 60

Query: 61 WARYDMGVEKVARLDGLSEAQISKALEDLVKVGAS 96
          WARYDMGVE+VARL+GLSEAQISKALEDLVKVGAS
Sbjct: 61 WARYDMGVERVARLEGLSEAQISKALEDLVKVGAS 95

[Close]

BLAST of Lcy10g006830 vs. NCBI nr
Match: XP_004141152.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Cucumis sativus])

HSP 1 Score: 185.7 bits (470), Expect = 1.9e-43
Identity = 89/95 (93.68%), Postives = 95/95 (100.00%), Query Frame = 0


Query: 1  MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKDLKTLNPRFPILIRECSGIEPQL 60
          MAWRG+LSKNLKELRILLCQ+SPSSAPARAFVEKNYKDLKTLNP+FPILIRECSGIEPQL
Sbjct: 1  MAWRGKLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQL 60

Query: 61 WARYDMGVEKVARLDGLSEAQISKALEDLVKVGAS 96
          WARYDMG+E+VARL+GLSEAQISKALEDLVKVGAS
Sbjct: 61 WARYDMGIERVARLEGLSEAQISKALEDLVKVGAS 95

[Close]

BLAST of Lcy10g006830 vs. NCBI nr
Match: XP_022152373.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Momordica charantia])

HSP 1 Score: 185.3 bits (469), Expect = 2.5e-43
Identity = 89/95 (93.68%), Postives = 94/95 (98.95%), Query Frame = 0


Query: 1  MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKDLKTLNPRFPILIRECSGIEPQL 60
          MAWRG LSKNLKELRILLCQTSPSSAPARAFVEKNYKDLK+LNP+FPILIRECSG+EPQL
Sbjct: 1  MAWRGHLSKNLKELRILLCQTSPSSAPARAFVEKNYKDLKSLNPKFPILIRECSGVEPQL 60

Query: 61 WARYDMGVEKVARLDGLSEAQISKALEDLVKVGAS 96
          WARYDMGVE+VARL+GLSEAQISKALEDLVKVGAS
Sbjct: 61 WARYDMGVERVARLEGLSEAQISKALEDLVKVGAS 95

[Close]

BLAST of Lcy10g006830 vs. TAIR 10
Match: AT5G47890.1 (NADH-ubiquinone oxidoreductase B8 subunit, putative )

HSP 1 Score: 157.1 bits (396), Expect = 6.8e-39
Identity = 71/95 (74.74%), Postives = 85/95 (89.47%), Query Frame = 0


Query: 1  MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKDLKTLNPRFPILIRECSGIEPQL 60
          MAWRG +SK++KELRILLCQ+SP+SAP R FVEKNYKDLK+LNP+ PILIRECSG++PQ+
Sbjct: 1  MAWRGSISKSMKELRILLCQSSPASAPTRTFVEKNYKDLKSLNPKLPILIRECSGVQPQM 60

Query: 61 WARYDMGVEKVARLDGLSEAQISKALEDLVKVGAS 96
          WARYDMGVE+   LDGL+E QI KALE+LVK GA+
Sbjct: 61 WARYDMGVERCVNLDGLTEPQILKALENLVKSGAT 95

The following BLAST results are available for this feature:

BLAST of Lcy10g006830 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FIJ2	9.6e-38	74.74	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Arabidopsis thal...	[more]
P0CB79	4.5e-19	52.94	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Pongo abelii OX=...	[more]
P0CB80	4.5e-19	52.94	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Pongo pygmaeus O...	[more]
Q02370	1.7e-18	51.72	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Bos taurus OX=99...	[more]
Q4R5E2	4.9e-18	52.50	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Macaca fascicula...	[more]

BLAST of Lcy10g006830 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T2I6	3.2e-44	94.74	NADH dehydrogenase (Ubiquinone) 1 alpha subcomplex subunit 2 OS=Cucumis melo var...	[more]
A0A1S3CN67	3.2e-44	94.74	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Cucumis melo OX=...	[more]
A0A6J1F628	4.2e-44	93.68	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like OS=Cucurbita m...	[more]
A0A0A0LDA2	9.3e-44	93.68	L51_S25_CI-B8 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G8454...	[more]
A0A6J1DEP8	1.2e-43	93.68	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Momordica charan...	[more]

BLAST of Lcy10g006830 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008465169.1	6.6e-44	94.74	PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Cucumis...	[more]
XP_022935669.1	8.6e-44	93.68	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like [Cucurbita mos...	[more]
XP_038906356.1	1.9e-43	93.68	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Benincasa hispida]	[more]
XP_004141152.1	1.9e-43	93.68	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Cucumis sativus]	[more]
XP_022152373.1	2.5e-43	93.68	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Momordica charanti...	[more]

BLAST of Lcy10g006830 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G47890.1	6.8e-39	74.74	NADH-ubiquinone oxidoreductase B8 subunit, putative	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007741	Ribosomal protein/NADH dehydrogenase domain	SMART	SM00916	L51_S25_CI_B8_2	coord: 20..93 e-value: 1.9E-25 score: 100.5
IPR007741	Ribosomal protein/NADH dehydrogenase domain	PFAM	PF05047	L51_S25_CI-B8	coord: 28..78 e-value: 8.9E-15 score: 54.4
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 2..93 e-value: 9.0E-32 score: 111.3
None	No IPR available	PIRSR	PIRSR005822-1	PIRSR005822-1	coord: 1..91 e-value: 8.7E-38 score: 126.7
None	No IPR available	PANTHER	PTHR12878:SF5	BNAANNG07980D PROTEIN	coord: 1..94
IPR016464	NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 2	PIRSF	PIRSF005822	NDUA2	coord: 1..95 e-value: 2.0E-39 score: 132.1
IPR016464	NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 2	PANTHER	PTHR12878	NADH-UBIQUINONE OXIDOREDUCTASE B8 SUBUNIT	coord: 1..94
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 10..91

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy10g006830.1	Lcy10g006830.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005747	mitochondrial respiratory chain complex I