Homology
BLAST of Lcy10g006430 vs. ExPASy Swiss-Prot
Match:
Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)
HSP 1 Score: 615.1 bits (1585), Expect = 1.0e-174
Identity = 307/764 (40.18%), Postives = 461/764 (60.34%), Query Frame = 0
Query: 1 MKHCQDIKQFNQILSQMLLTGFIKDTYAASRLIKFSADFP-FIHIDYSRQIFNLIENTNC 60
+ +C+ ++ I +QM+ G YA S+LI+F P F + Y+ +F I+ N
Sbjct: 40 LHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNL 99
Query: 61 FTWNVMMRAYIQRNSPHLVLSLYKLMLLEQMGADNYTYPLLIQACSIRRSEWEGKQVHNH 120
WN M R + + P L LY M+ + ++YT+P ++++C+ ++ EG+Q+H H
Sbjct: 100 LIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGH 159
Query: 121 VLKLGFDSDVYVQNTLINLFSVCSNTTDARRVFDESSVLDSVSWNSILAGYVQIGNVEEA 180
VLKLG D D+YV +LI++ YVQ G +E+A
Sbjct: 160 VLKLGCDLDLYVHTSLISM-------------------------------YVQNGRLEDA 219
Query: 181 KYMYDQMPERSIIASNSMIVLFGIKGLVAEACRLFDEMPEKDMVTWSALIACYEQNGMFE 240
++D+ P R +++ ++I + +G + A +LFDE+P KD+V+W+A+I+ Y + G ++
Sbjct: 220 HKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYK 279
Query: 241 EAMRTFVGMHNVGVMVDEVVAVSALSACANLLIVNMGQLIHSLVLKVGIESYINLQNALI 300
EA+ F M V DE V+ +SACA + +G+ +H + G S + + NALI
Sbjct: 280 EALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALI 339
Query: 301 HMYSKCGDILEARKLFDEAYLLDFISWNSMISGYLKCGLVENAKAIFDSMPKKDVVSWSS 360
+YSKCG++ E A +F+ +P KDV+SW++
Sbjct: 340 DLYSKCGEL-------------------------------ETACGLFERLPYKDVISWNT 399
Query: 361 MISGYAQHDLFYDTLTLFQEMQMNGFKPDETTLVSVISACTRLAAFEQGKWIHAYIKK-- 420
+I GY +L+ + L LFQEM +G P++ T++S++ AC L A + G+WIH YI K
Sbjct: 400 LIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRL 459
Query: 421 NSLTVNVILGTTLIDMYMKCGCVESALEVFHEMDEKGVSTWNALILGLAMNGLVESSLDT 480
+T L T+LIDMY KCG +E+A +VF+ + K +S+WNA+I G AM+G ++S D
Sbjct: 460 KGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDL 519
Query: 481 FSNMKKGHVAPNEITFVGVLSACRHMGLVDEGQHHFDSMIHDHKIKPNIKHYGCMVDLLG 540
FS M+K + P++ITFVG+LSAC H G++D G+H F +M D+K+ P ++HYGCM+DLLG
Sbjct: 520 FSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLG 579
Query: 541 RAGKLQEAEELLNRMPMAPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVL 600
+G +EAEE++N M M PD W +LL ACK HG+ E+G LI+++P++ G +VL
Sbjct: 580 HSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVL 639
Query: 601 LSNIYASKGKWDDVLEVRGMMTKHRVLKTPGCSMIEANGVVHEFLAGDKTHPDMDVIEDM 660
LSNIYAS G+W++V + R ++ + K PGCS IE + VVHEF+ GDK HP I M
Sbjct: 640 LSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGM 699
Query: 661 LGQMAMKLKLEGYTPDTNEVLLDVDEEEKESTLFRHSEKLAIAFGLINISPPTPIRIMKN 720
L +M + L+ G+ PDT+EVL +++EE KE L HSEKLAIAFGLI+ P T + I+KN
Sbjct: 700 LEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKN 741
Query: 721 LRICNDCHTAAKLISKAFCRQIVVRDRHRFHHFEQGLCSCNDYW 762
LR+C +CH A KLISK + R+I+ RDR RFHHF G+CSCNDYW
Sbjct: 760 LRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
BLAST of Lcy10g006430 vs. ExPASy Swiss-Prot
Match:
Q9LUJ2 (Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H56 PE=3 SV=1)
HSP 1 Score: 562.8 bits (1449), Expect = 6.1e-159
Identity = 292/804 (36.32%), Postives = 464/804 (57.71%), Query Frame = 0
Query: 1 MKHCQDIKQFNQILSQMLLTGFIKDTYAASRLIKFSADFPFIH-IDYSRQIFNLIEN-TN 60
+K+C+ I + + G D ++L+ S + + +++++F E+
Sbjct: 39 LKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGT 98
Query: 61 CFTWNVMMRAYIQRNSPHLVLSLYKLMLLEQMGADNYTYPLLIQACSIRRSEWEGKQVHN 120
CF +N ++R Y + + L+ M+ + D YT+P + AC+ R++ G Q+H
Sbjct: 99 CFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHG 158
Query: 121 HVLKLGFDSDVYVQNTLINLFSVCSNTTDARRVFDESSVLDSVSWNSILAGYVQIGNVEE 180
++K+G+ D++VQN+L++ ++ C AR+VFDE S + VSW S++ GY + ++
Sbjct: 159 LIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKD 218
Query: 181 AKYMYDQMPERSIIASNSMIVLFGIK---------------------------------- 240
A ++ +M + NS+ ++ I
Sbjct: 219 AVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALV 278
Query: 241 ------GLVAEACRLFDEMPEKDMVTWSALIACYEQNGMFEEAMRTFVGMHNVGVMVDEV 300
+ A RLFDE ++ +A+ + Y + G+ EA+ F M + GV D +
Sbjct: 279 DMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRI 338
Query: 301 VAVSALSACANLLIVNMGQLIHSLVLKVGIESYINLQNALIHMYSKCGDILEARKLFDEA 360
+SA+S+C+ L + G+ H VL+ G ES+ N+ NALI MY KC A ++FD
Sbjct: 339 SMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRM 398
Query: 361 YLLDFISWNSMISGYLKCGLVENAKAIFDSMPKKDVVSWSSMISGYAQHDLFYDTLTLFQ 420
++WNS+++GY++ G V+ A F++MP+K++VSW+++ISG Q LF + + +F
Sbjct: 399 SNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFC 458
Query: 421 EMQ-MNGFKPDETTLVSVISACTRLAAFEQGKWIHAYIKKNSLTVNVILGTTLIDMYMKC 480
MQ G D T++S+ SAC L A + KWI+ YI+KN + ++V LGTTL+DM+ +C
Sbjct: 459 SMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRC 518
Query: 481 GCVESALEVFHEMDEKGVSTWNALILGLAMNGLVESSLDTFSNMKKGHVAPNEITFVGVL 540
G ESA+ +F+ + + VS W A I +AM G E +++ F +M + + P+ + FVG L
Sbjct: 519 GDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGAL 578
Query: 541 SACRHMGLVDEGQHHFDSMIHDHKIKPNIKHYGCMVDLLGRAGKLQEAEELLNRMPMAPD 600
+AC H GLV +G+ F SM+ H + P HYGCMVDLLGRAG L+EA +L+ MPM P+
Sbjct: 579 TACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPN 638
Query: 601 VATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEVRGM 660
W +LL AC+ G+ EM K+ L P+ G +VLLSN+YAS G+W+D+ +VR
Sbjct: 639 DVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLS 698
Query: 661 MTKHRVLKTPGCSMIEANGVVHEFLAGDKTHPDMDVIEDMLGQMAMKLKLEGYTPDTNEV 720
M + + K PG S I+ G HEF +GD++HP+M IE ML +++ + G+ PD + V
Sbjct: 699 MKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNV 758
Query: 721 LLDVDEEEKESTLFRHSEKLAIAFGLINISPPTPIRIMKNLRICNDCHTAAKLISKAFCR 762
L+DVDE+EK L RHSEKLA+A+GLI+ + T IRI+KNLR+C+DCH+ AK SK + R
Sbjct: 759 LMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNR 818
BLAST of Lcy10g006430 vs. ExPASy Swiss-Prot
Match:
O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)
HSP 1 Score: 560.5 bits (1443), Expect = 3.0e-158
Identity = 291/764 (38.09%), Postives = 443/764 (57.98%), Query Frame = 0
Query: 1 MKHCQDIKQFNQILSQMLLTGFIKDTYAASRLIKFSADFPFIHIDYSRQIFNLIENTNCF 60
++ C ++Q Q M+ TG D Y+AS+L +A F ++Y+R++F+ I N F
Sbjct: 37 IERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSF 96
Query: 61 TWNVMMRAYIQRNSPHLVLSLYKLMLLE-QMGADNYTYPLLIQACSIRRSEWEGKQVHNH 120
WN ++RAY P L + + M+ E Q + YT+P LI+A + S G+ +H
Sbjct: 97 AWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGM 156
Query: 121 VLKLGFDSDVYVQNTLINLFSVCSNTTDARRVFDESSVLDSVSWNSILAGYVQIGNVEEA 180
+K SDV+V N+LI+ + C + LDS
Sbjct: 157 AVKSAVGSDVFVANSLIHCYFSCGD-------------LDS------------------- 216
Query: 181 KYMYDQMPERSIIASNSMIVLFGIKGLVAEACRLFDEMPEKDMVTWSALIACYEQNGMFE 240
AC++F + EKD+V+W+++I + Q G +
Sbjct: 217 ------------------------------ACKVFTTIKEKDVVSWNSMINGFVQKGSPD 276
Query: 241 EAMRTFVGMHNVGVMVDEVVAVSALSACANLLIVNMGQLIHSLVLKVGIESYINLQNALI 300
+A+ F M + V V V LSACA + + G+ + S + + + + L NA++
Sbjct: 277 KALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAML 336
Query: 301 HMYSKCGDILEARKLFDEAYLLDFISWNSMISGYLKCGLVENAKAIFDSMPKKDVVSWSS 360
MY+KCG I +A++LFD D ++W +M+ GY E A+ + +SMP+KD+V+W++
Sbjct: 337 DMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNA 396
Query: 361 MISGYAQHDLFYDTLTLFQEMQM-NGFKPDETTLVSVISACTRLAAFEQGKWIHAYIKKN 420
+IS Y Q+ + L +F E+Q+ K ++ TLVS +SAC ++ A E G+WIH+YIKK+
Sbjct: 397 LISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKH 456
Query: 421 SLTVNVILGTTLIDMYMKCGCVESALEVFHEMDEKGVSTWNALILGLAMNGLVESSLDTF 480
+ +N + + LI MY KCG +E + EVF+ ++++ V W+A+I GLAM+G ++D F
Sbjct: 457 GIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMF 516
Query: 481 SNMKKGHVAPNEITFVGVLSACRHMGLVDEGQHHFDSMIHDHKIKPNIKHYGCMVDLLGR 540
M++ +V PN +TF V AC H GLVDE + F M ++ I P KHY C+VD+LGR
Sbjct: 517 YKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGR 576
Query: 541 AGKLQEAEELLNRMPMAPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLL 600
+G L++A + + MP+ P + WGALLGACK H + + +L+EL+P +DG HVLL
Sbjct: 577 SGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLL 636
Query: 601 SNIYASKGKWDDVLEVRGMMTKHRVLKTPGCSMIEANGVVHEFLAGDKTHPDMDVIEDML 660
SNIYA GKW++V E+R M + K PGCS IE +G++HEFL+GD HP + + L
Sbjct: 637 SNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKL 696
Query: 661 GQMAMKLKLEGYTPDTNEVLLDVDEEE-KESTLFRHSEKLAIAFGLINISPPTPIRIMKN 720
++ KLK GY P+ ++VL ++EEE KE +L HSEKLAI +GLI+ P IR++KN
Sbjct: 697 HEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKN 738
Query: 721 LRICNDCHTAAKLISKAFCRQIVVRDRHRFHHFEQGLCSCNDYW 762
LR+C DCH+ AKLIS+ + R+I+VRDR+RFHHF G CSCND+W
Sbjct: 757 LRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
BLAST of Lcy10g006430 vs. ExPASy Swiss-Prot
Match:
Q3E6Q1 (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1)
HSP 1 Score: 509.2 bits (1310), Expect = 7.9e-143
Identity = 275/800 (34.38%), Postives = 426/800 (53.25%), Query Frame = 0
Query: 1 MKHCQDIKQFNQILSQMLLTGFIKDTYAASRLIKFSADFPFIHIDYSRQIFNLIENTNCF 60
++ C +K+ QIL + G ++ + ++L+ + +D + ++F I++
Sbjct: 44 LERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYG--SVDEAARVFEPIDSKLNV 103
Query: 61 TWNVMMRAYIQRNSPHLVLSLYKLMLLEQMGADNYTYPLLIQACSIRRSEWEGKQVHNHV 120
++ M++ + + + L + M + + Y + L++ C GK++H +
Sbjct: 104 LYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLL 163
Query: 121 LKLGFDSDVYVQNTLINLFSVCSNTTDARRVFDESSVLDSVSWNSILAGYVQIGNVEEAK 180
+K GF D++ L N+++ C +AR+VFD D VSWN+I+AGY Q G A
Sbjct: 164 VKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMAL 223
Query: 181 YMYDQMPERS---------------------------------------IIASNSMIVLF 240
M M E + + S +++ ++
Sbjct: 224 EMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMY 283
Query: 241 GIKGLVAEACRLFDEMPEKDMVTWSALIACYEQNGMFEEAMRTFVGMHNVGVMVDEVVAV 300
G + A +LFD M E+++V+W+++I Y QN +EAM F M + GV +V +
Sbjct: 284 AKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVM 343
Query: 301 SALSACANLLIVNMGQLIHSLVLKVGIESYINLQNALIHMYSKCGDILEARKLFDEAYLL 360
AL ACA+L + G+ IH L +++G++ +++ N+LI MY KC +
Sbjct: 344 GALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKE-------------- 403
Query: 361 DFISWNSMISGYLKCGLVENAKAIFDSMPKKDVVSWSSMISGYAQHDLFYDTLTLFQEMQ 420
V+ A ++F + + +VSW++MI G+AQ+ D L F +M+
Sbjct: 404 -----------------VDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMR 463
Query: 421 MNGFKPDETTLVSVISACTRLAAFEQGKWIHAYIKKNSLTVNVILGTTLIDMYMKCGCVE 480
KPD T VSVI+A L+ KWIH + ++ L NV + T L+DMY KCG +
Sbjct: 464 SRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIM 523
Query: 481 SALEVFHEMDEKGVSTWNALILGLAMNGLVESSLDTFSNMKKGHVAPNEITFVGVLSACR 540
A +F M E+ V+TWNA+I G +G +++L+ F M+KG + PN +TF+ V+SAC
Sbjct: 524 IARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACS 583
Query: 541 HMGLVDEGQHHFDSMIHDHKIKPNIKHYGCMVDLLGRAGKLQEAEELLNRMPMAPDVATW 600
H GLV+ G F M ++ I+ ++ HYG MVDLLGRAG+L EA + + +MP+ P V +
Sbjct: 584 HSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVY 643
Query: 601 GALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEVRGMMTKH 660
GA+LGAC+ H + + +L EL PD G+HVLL+NIY + W+ V +VR M +
Sbjct: 644 GAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQ 703
Query: 661 RVLKTPGCSMIEANGVVHEFLAGDKTHPDMDVIEDMLGQMAMKLKLEGYTPDTNEVLLDV 720
+ KTPGCSM+E VH F +G HPD I L ++ +K GY PDTN ++L V
Sbjct: 704 GLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTN-LVLGV 763
Query: 721 DEEEKESTLFRHSEKLAIAFGLINISPPTPIRIMKNLRICNDCHTAAKLISKAFCRQIVV 762
+ + KE L HSEKLAI+FGL+N + T I + KNLR+C DCH A K IS R+IVV
Sbjct: 764 ENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVV 809
BLAST of Lcy10g006430 vs. ExPASy Swiss-Prot
Match:
Q9SHZ8 (Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H41 PE=3 SV=1)
HSP 1 Score: 507.7 bits (1306), Expect = 2.3e-142
Identity = 270/721 (37.45%), Postives = 410/721 (56.87%), Query Frame = 0
Query: 44 IDYSRQIFNLIENTNCFTWNVMMRAYIQRNSPHLVLSLYKLMLLEQMGADNYTYPLLIQA 103
+D + + F+ + + +W M+ Y H + + M+ E + +T ++ +
Sbjct: 96 MDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLAS 155
Query: 104 CSIRRSEWEGKQVHNHVLKLGFDSDVYVQNTLINLFSVCSNTTDARRVFDESSVLDSVSW 163
+ R GK+VH+ ++KLG +V V N+L+N+++ C + A+ VFD V D SW
Sbjct: 156 VAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSW 215
Query: 164 NSILAGYVQIGNVEEAKYMYDQMPERSIIASNSMIVLFGIKGLVAEACRLFDEMPEKDMV 223
N+++A ++Q+G ++ A ++QM ER I+ NSMI F +G A +F +M ++
Sbjct: 216 NAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLL 275
Query: 224 TWSALIACYEQNGMFEEAMRTFVGMHNVGVMVDEVVAVSALSACANLLIVNMGQLIHSLV 283
+ D S LSACANL + +G+ IHS +
Sbjct: 276 S------------------------------PDRFTLASVLSACANLEKLCIGKQIHSHI 335
Query: 284 LKVGIESYINLQNALIHMYSKCGDILEARKLFDEAYLLD--FISWNSMISGYLKCGLVEN 343
+ G + + NALI MYS+CG + AR+L ++ D + +++ GY+K G +
Sbjct: 336 VTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQ 395
Query: 344 AKAIFDSMPKKDVVSWSSMISGYAQHDLFYDTLTLFQEMQMNGFKPDETTLVSVISACTR 403
AK IF S+ +DVV+W++MI GY QH + + + LF+ M G +P+ TL +++S +
Sbjct: 396 AKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASS 455
Query: 404 LAAFEQGKWIHAYIKKNSLTVNVILGTTLIDMYMKCGCVESALEVFHEMD-EKGVSTWNA 463
LA+ GK IH K+ +V + LI MY K G + SA F + E+ +W +
Sbjct: 456 LASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTS 515
Query: 464 LILGLAMNGLVESSLDTFSNMKKGHVAPNEITFVGVLSACRHMGLVDEGQHHFDSMIHDH 523
+I+ LA +G E +L+ F M + P+ IT+VGV SAC H GLV++G+ +FD M
Sbjct: 516 MIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVD 575
Query: 524 KIKPNIKHYGCMVDLLGRAGKLQEAEELLNRMPMAPDVATWGALLGACKKHGDSEMGRRV 583
KI P + HY CMVDL GRAG LQEA+E + +MP+ PDV TWG+LL AC+ H + ++G+
Sbjct: 576 KIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVA 635
Query: 584 GRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEVRGMMTKHRVLKTPGCSMIEANGVVHE 643
+L+ L+P++ G + L+N+Y++ GKW++ ++R M RV K G S IE VH
Sbjct: 636 AERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHV 695
Query: 644 FLAGDKTHPDMDVIEDMLGQMAMKLKLEGYTPDTNEVLLDVDEEEKESTLFRHSEKLAIA 703
F D THP+ + I + ++ ++K GY PDT VL D++EE KE L HSEKLAIA
Sbjct: 696 FGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIA 755
Query: 704 FGLINISPPTPIRIMKNLRICNDCHTAAKLISKAFCRQIVVRDRHRFHHFEQGLCSCNDY 762
FGLI+ T +RIMKNLR+CNDCHTA K ISK R+I+VRD RFHHF+ G CSC DY
Sbjct: 756 FGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDY 786
BLAST of Lcy10g006430 vs. ExPASy TrEMBL
Match:
A0A6J1J842 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111482218 PE=3 SV=1)
HSP 1 Score: 1426.8 bits (3692), Expect = 0.0e+00
Identity = 690/761 (90.67%), Postives = 723/761 (95.01%), Query Frame = 0
Query: 1 MKHCQDIKQFNQILSQMLLTGFIKDTYAASRLIKFSADFPFIHIDYSRQIFNLIENTNCF 60
MK CQ+IKQF+Q+LSQMLLTG I+DTYAASRLIKFS DFPF HIDY+ +IFNLIENTNCF
Sbjct: 36 MKQCQNIKQFDQVLSQMLLTGLIRDTYAASRLIKFSTDFPFTHIDYTLRIFNLIENTNCF 95
Query: 61 TWNVMMRAYIQRNSPHLVLSLYKLMLLEQMGADNYTYPLLIQACSIRRSEWEGKQVHNHV 120
WN+MMRAYIQRNSPH L+LYK ML + + ADNYTYPLLIQACSIRRSE EGKQVHNHV
Sbjct: 96 MWNMMMRAYIQRNSPHFALNLYKSMLFKYLEADNYTYPLLIQACSIRRSEGEGKQVHNHV 155
Query: 121 LKLGFDSDVYVQNTLINLFSVCSNTTDARRVFDESSVLDSVSWNSILAGYVQIGNVEEAK 180
+KLGFDSDVYVQNTLIN FSVCSN +DARRVFDESSVLDSVSWNSIL+GYVQ+GNVEEAK
Sbjct: 156 MKLGFDSDVYVQNTLINFFSVCSNMSDARRVFDESSVLDSVSWNSILSGYVQVGNVEEAK 215
Query: 181 YMYDQMPERSIIASNSMIVLFGIKGLVAEACRLFDEMPEKDMVTWSALIACYEQNGMFEE 240
YMYDQMPE+SIIASNSMIVLFG KGLV EAC+LFDEMPE+DMVTWSALIACYEQN MFEE
Sbjct: 216 YMYDQMPEKSIIASNSMIVLFGNKGLVVEACKLFDEMPERDMVTWSALIACYEQNEMFEE 275
Query: 241 AMRTFVGMHNVGVMVDEVVAVSALSACANLLIVNMGQLIHSLVLKVGIESYINLQNALIH 300
AMRTFVGMH +GVMVDEVV VSALSACANLLIVNMG+LIHSL LK+GIESYINLQNALIH
Sbjct: 276 AMRTFVGMHKIGVMVDEVVTVSALSACANLLIVNMGKLIHSLALKIGIESYINLQNALIH 335
Query: 301 MYSKCGDILEARKLFDEAYLLDFISWNSMISGYLKCGLVENAKAIFDSMPKKDVVSWSSM 360
MYSK GDI+EARKLFDEAYLLD ISWNSMISGYLKCGLVENAKAIFDSMPKKDVVSWSSM
Sbjct: 336 MYSKFGDIMEARKLFDEAYLLDLISWNSMISGYLKCGLVENAKAIFDSMPKKDVVSWSSM 395
Query: 361 ISGYAQHDLFYDTLTLFQEMQMNGFKPDETTLVSVISACTRLAAFEQGKWIHAYIKKNSL 420
ISGYAQHDLFY+TLTLFQEMQMNGFKPDETTLVSVISACTRLAA EQGKW+HAYIKKN L
Sbjct: 396 ISGYAQHDLFYETLTLFQEMQMNGFKPDETTLVSVISACTRLAALEQGKWVHAYIKKNGL 455
Query: 421 TVNVILGTTLIDMYMKCGCVESALEVFHEMDEKGVSTWNALILGLAMNGLVESSLDTFSN 480
TVNVILGTTLIDMYMKCGC ESALEVF M EKGVSTWNALILGLAMNG VESSL+ FSN
Sbjct: 456 TVNVILGTTLIDMYMKCGCAESALEVFDGMVEKGVSTWNALILGLAMNGSVESSLEMFSN 515
Query: 481 MKKGHVAPNEITFVGVLSACRHMGLVDEGQHHFDSMIHDHKIKPNIKHYGCMVDLLGRAG 540
MKKGHVAPNEITFVGVL ACRHMGLVDEG+HHF SMI+DHKI+PN+KHYGCMVDLLGRAG
Sbjct: 516 MKKGHVAPNEITFVGVLGACRHMGLVDEGRHHFHSMIYDHKIRPNVKHYGCMVDLLGRAG 575
Query: 541 KLQEAEELLNRMPMAPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSN 600
KLQEAEELLNRMPM PDVATWGALLGACKKHGDSE+GRRVGRKLIELQPDHDGFHVLLSN
Sbjct: 576 KLQEAEELLNRMPMTPDVATWGALLGACKKHGDSELGRRVGRKLIELQPDHDGFHVLLSN 635
Query: 601 IYASKGKWDDVLEVRGMMTKHRVLKTPGCSMIEANGVVHEFLAGDKTHPDMDVIEDMLGQ 660
I ASKGKWDDVLE+RGMMTKHRVLKTPGCSMIEANGVVHEFLAGDKTHPDMD IEDMLGQ
Sbjct: 636 ICASKGKWDDVLEIRGMMTKHRVLKTPGCSMIEANGVVHEFLAGDKTHPDMDAIEDMLGQ 695
Query: 661 MAMKLKLEGYTPDTNEVLLDVDEEEKESTLFRHSEKLAIAFGLINISPPTPIRIMKNLRI 720
MAMKLKLEGYTPDTNEVLLDVDEEEKESTLFRHSEKLAIAFGLINISPPTPIRI+KNLRI
Sbjct: 696 MAMKLKLEGYTPDTNEVLLDVDEEEKESTLFRHSEKLAIAFGLINISPPTPIRIIKNLRI 755
Query: 721 CNDCHTAAKLISKAFCRQIVVRDRHRFHHFEQGLCSCNDYW 762
CNDCHTAAKLISKAFCRQIV+RDRHRFHHFE G+CSC DYW
Sbjct: 756 CNDCHTAAKLISKAFCRQIVLRDRHRFHHFEHGICSCKDYW 796
BLAST of Lcy10g006430 vs. ExPASy TrEMBL
Match:
A0A6J1F0X4 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111441375 PE=3 SV=1)
HSP 1 Score: 1424.8 bits (3687), Expect = 0.0e+00
Identity = 691/761 (90.80%), Postives = 721/761 (94.74%), Query Frame = 0
Query: 1 MKHCQDIKQFNQILSQMLLTGFIKDTYAASRLIKFSADFPFIHIDYSRQIFNLIENTNCF 60
MK CQ+IKQF+Q+LSQMLLTG I+DTYAASRLIKFS +FPFIHIDY+ +IFNLIENTNCF
Sbjct: 36 MKQCQNIKQFDQVLSQMLLTGLIRDTYAASRLIKFSTEFPFIHIDYTLRIFNLIENTNCF 95
Query: 61 TWNVMMRAYIQRNSPHLVLSLYKLMLLEQMGADNYTYPLLIQACSIRRSEWEGKQVHNHV 120
WN+MMRAYIQRNSPH LSLYK ML + + ADNYTYPLLIQACSIRRSEWEGKQVHNHV
Sbjct: 96 MWNMMMRAYIQRNSPHFALSLYKSMLFKYLEADNYTYPLLIQACSIRRSEWEGKQVHNHV 155
Query: 121 LKLGFDSDVYVQNTLINLFSVCSNTTDARRVFDESSVLDSVSWNSILAGYVQIGNVEEAK 180
+KLGFDSDVYVQNTLIN FSVCSN +DARRVFDES+VLDSVSWNSILAGYVQ+GNVEEAK
Sbjct: 156 MKLGFDSDVYVQNTLINFFSVCSNMSDARRVFDESTVLDSVSWNSILAGYVQVGNVEEAK 215
Query: 181 YMYDQMPERSIIASNSMIVLFGIKGLVAEACRLFDEMPEKDMVTWSALIACYEQNGMFEE 240
MYDQMPE+SIIASNSMIVLFG KGLV EAC+LFDEMPE+DMVTWSALIACYEQN MFEE
Sbjct: 216 CMYDQMPEKSIIASNSMIVLFGNKGLVVEACKLFDEMPERDMVTWSALIACYEQNEMFEE 275
Query: 241 AMRTFVGMHNVGVMVDEVVAVSALSACANLLIVNMGQLIHSLVLKVGIESYINLQNALIH 300
AMRTFVGMH GVMVDEVV VSALSACANLLIVNMG+LIHSL LK+GIESYINLQNALIH
Sbjct: 276 AMRTFVGMHKFGVMVDEVVTVSALSACANLLIVNMGKLIHSLALKIGIESYINLQNALIH 335
Query: 301 MYSKCGDILEARKLFDEAYLLDFISWNSMISGYLKCGLVENAKAIFDSMPKKDVVSWSSM 360
MYSK GDI ARKLFDEAYLLD ISWNSMISGYLKCGLVENAKAIFDSMPKKDVVSWSSM
Sbjct: 336 MYSKFGDITVARKLFDEAYLLDLISWNSMISGYLKCGLVENAKAIFDSMPKKDVVSWSSM 395
Query: 361 ISGYAQHDLFYDTLTLFQEMQMNGFKPDETTLVSVISACTRLAAFEQGKWIHAYIKKNSL 420
ISGYAQHDLFY+TLTLFQEMQMNGFKPDETTLVSVISACTRLAA EQGKW+HAYIKKN L
Sbjct: 396 ISGYAQHDLFYETLTLFQEMQMNGFKPDETTLVSVISACTRLAALEQGKWVHAYIKKNGL 455
Query: 421 TVNVILGTTLIDMYMKCGCVESALEVFHEMDEKGVSTWNALILGLAMNGLVESSLDTFSN 480
TVNVILGTTLIDMYMKCGCVESALEVF M EKGVSTWNALILGLAMNG VESSL+ FSN
Sbjct: 456 TVNVILGTTLIDMYMKCGCVESALEVFDGMVEKGVSTWNALILGLAMNGSVESSLEMFSN 515
Query: 481 MKKGHVAPNEITFVGVLSACRHMGLVDEGQHHFDSMIHDHKIKPNIKHYGCMVDLLGRAG 540
MKKGHV PNEITFVGVL ACRHMGLVDEG+HHF SMI+DHKI+PN+K YGCMVDLLGRAG
Sbjct: 516 MKKGHVTPNEITFVGVLGACRHMGLVDEGRHHFHSMIYDHKIRPNVKLYGCMVDLLGRAG 575
Query: 541 KLQEAEELLNRMPMAPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSN 600
KLQEAEELLNRMPM PDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSN
Sbjct: 576 KLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSN 635
Query: 601 IYASKGKWDDVLEVRGMMTKHRVLKTPGCSMIEANGVVHEFLAGDKTHPDMDVIEDMLGQ 660
IYASKGKWDDVLE+RGMMTKHRVLKTPGCSMIEANGVVHEFLAGDKTHPDMD IEDMLGQ
Sbjct: 636 IYASKGKWDDVLEIRGMMTKHRVLKTPGCSMIEANGVVHEFLAGDKTHPDMDAIEDMLGQ 695
Query: 661 MAMKLKLEGYTPDTNEVLLDVDEEEKESTLFRHSEKLAIAFGLINISPPTPIRIMKNLRI 720
MAMKLKLEGYTPDTNEVLLDVDEEEKESTLFRHSEKLAIAFGLINISPPTPIRI+KNLRI
Sbjct: 696 MAMKLKLEGYTPDTNEVLLDVDEEEKESTLFRHSEKLAIAFGLINISPPTPIRIIKNLRI 755
Query: 721 CNDCHTAAKLISKAFCRQIVVRDRHRFHHFEQGLCSCNDYW 762
CNDCHTAAKLISKAFCRQIV+RDRHRFHHFE G+CSC DYW
Sbjct: 756 CNDCHTAAKLISKAFCRQIVLRDRHRFHHFEHGICSCKDYW 796
BLAST of Lcy10g006430 vs. ExPASy TrEMBL
Match:
A0A6J1DFB5 (pentatricopeptide repeat-containing protein At3g62890 OS=Momordica charantia OX=3673 GN=LOC111019971 PE=3 SV=1)
HSP 1 Score: 1401.3 bits (3626), Expect = 0.0e+00
Identity = 675/761 (88.70%), Postives = 714/761 (93.82%), Query Frame = 0
Query: 1 MKHCQDIKQFNQILSQMLLTGFIKDTYAASRLIKFSADFPFIHIDYSRQIFNLIENTNCF 60
+ C DIKQFNQILSQMLLTGFI+DTYAASRLIKFS DFPFIHIDY+R+IFN +ENTNCF
Sbjct: 37 LNQCHDIKQFNQILSQMLLTGFIRDTYAASRLIKFSTDFPFIHIDYTRRIFNCVENTNCF 96
Query: 61 TWNVMMRAYIQRNSPHLVLSLYKLMLLEQMGADNYTYPLLIQACSIRRSEWEGKQVHNHV 120
WNVMMR YIQRNSPH L LYKLML + +G DNYTYP+++QACSIR+SE+EGKQVHNH+
Sbjct: 97 MWNVMMRTYIQRNSPHFSLGLYKLMLSKYVGPDNYTYPIIVQACSIRQSEFEGKQVHNHI 156
Query: 121 LKLGFDSDVYVQNTLINLFSVCSNTTDARRVFDESSVLDSVSWNSILAGYVQIGNVEEAK 180
LKLGFDSDVYVQNTLINLFSVCSN TDARR+FDESSVLDSVSWNSILAGYVQIG+VEEAK
Sbjct: 157 LKLGFDSDVYVQNTLINLFSVCSNMTDARRMFDESSVLDSVSWNSILAGYVQIGSVEEAK 216
Query: 181 YMYDQMPERSIIASNSMIVLFGIKGLVAEACRLFDEMPEKDMVTWSALIACYEQNGMFEE 240
Y+YDQMPERSIIASNSMIVLFG KG V +A +LFDEMPEKDMVTWSALIACYEQN M EE
Sbjct: 217 YIYDQMPERSIIASNSMIVLFGSKGRVIDARKLFDEMPEKDMVTWSALIACYEQNEMLEE 276
Query: 241 AMRTFVGMHNVGVMVDEVVAVSALSACANLLIVNMGQLIHSLVLKVGIESYINLQNALIH 300
AMRTFVGMH +GVMVDEVVAVSALSACANLLIVNMG+LIHSL ++GIESYINLQNALIH
Sbjct: 277 AMRTFVGMHKIGVMVDEVVAVSALSACANLLIVNMGKLIHSLAWRIGIESYINLQNALIH 336
Query: 301 MYSKCGDILEARKLFDEAYLLDFISWNSMISGYLKCGLVENAKAIFDSMPKKDVVSWSSM 360
MYSKCGDI+EAR+LFDEAYLLD ISWNSMISGYLKCG VE+AKA+FD+MP+KD+VSWSS+
Sbjct: 337 MYSKCGDIMEARRLFDEAYLLDQISWNSMISGYLKCGSVEDAKALFDTMPRKDIVSWSSI 396
Query: 361 ISGYAQHDLFYDTLTLFQEMQMNGFKPDETTLVSVISACTRLAAFEQGKWIHAYIKKNSL 420
+SGYAQHDLFY+TLTLFQEMQMNG KPDET LVSVISAC RL A EQGKWIHAYIKKNSL
Sbjct: 397 LSGYAQHDLFYETLTLFQEMQMNGLKPDETMLVSVISACARLTALEQGKWIHAYIKKNSL 456
Query: 421 TVNVILGTTLIDMYMKCGCVESALEVFHEMDEKGVSTWNALILGLAMNGLVESSLDTFSN 480
TVN ILGTTL+DMYMKCGCVESALEVFH M EKGVSTWN LILGLAMNGLVESSLD FSN
Sbjct: 457 TVNAILGTTLVDMYMKCGCVESALEVFHGMVEKGVSTWNTLILGLAMNGLVESSLDMFSN 516
Query: 481 MKKGHVAPNEITFVGVLSACRHMGLVDEGQHHFDSMIHDHKIKPNIKHYGCMVDLLGRAG 540
MKK HVAPNEITFVGVL ACRHMGLVDEG+HHF SMIHDHKIKPNIKHYGCMVDLLGRAG
Sbjct: 517 MKKCHVAPNEITFVGVLGACRHMGLVDEGRHHFHSMIHDHKIKPNIKHYGCMVDLLGRAG 576
Query: 541 KLQEAEELLNRMPMAPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSN 600
KLQEAEE+LN MPM PDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSN
Sbjct: 577 KLQEAEEILNHMPMEPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSN 636
Query: 601 IYASKGKWDDVLEVRGMMTKHRVLKTPGCSMIEANGVVHEFLAGDKTHPDMDVIEDMLGQ 660
IYAS+GKWDDVLE+RGMMTKH VLKTPGCSMIEANGVVHEFLAGDK HPDMD IEDMLGQ
Sbjct: 637 IYASRGKWDDVLEIRGMMTKHGVLKTPGCSMIEANGVVHEFLAGDKLHPDMDAIEDMLGQ 696
Query: 661 MAMKLKLEGYTPDTNEVLLDVDEEEKESTLFRHSEKLAIAFGLINISPPTPIRIMKNLRI 720
MAMKLKLEGYTPDTNEVLLDVDEEEKESTLFRHSEKLAIAFGLINI+PPTPIRIMKNLRI
Sbjct: 697 MAMKLKLEGYTPDTNEVLLDVDEEEKESTLFRHSEKLAIAFGLININPPTPIRIMKNLRI 756
Query: 721 CNDCHTAAKLISKAFCRQIVVRDRHRFHHFEQGLCSCNDYW 762
CNDCHTAAKLISKAF RQIV+RDRHRFHHFE G CSC DYW
Sbjct: 757 CNDCHTAAKLISKAFGRQIVLRDRHRFHHFEHGFCSCKDYW 797
BLAST of Lcy10g006430 vs. ExPASy TrEMBL
Match:
A0A1S4E1G8 (pentatricopeptide repeat-containing protein At3g62890-like OS=Cucumis melo OX=3656 GN=LOC103496856 PE=3 SV=1)
HSP 1 Score: 1390.2 bits (3597), Expect = 0.0e+00
Identity = 672/761 (88.30%), Postives = 712/761 (93.56%), Query Frame = 0
Query: 1 MKHCQDIKQFNQILSQMLLTGFIKDTYAASRLIKFSADFPFIHIDYSRQIFNLIENTNCF 60
+ CQ I QFNQILSQMLLTGFI++TYAASRLIKFS FPFIHIDY+R+IFN IENTNCF
Sbjct: 52 LNKCQHINQFNQILSQMLLTGFIRETYAASRLIKFSTHFPFIHIDYTRRIFNFIENTNCF 111
Query: 61 TWNVMMRAYIQRNSPHLVLSLYKLMLLEQMGADNYTYPLLIQACSIRRSEWEGKQVHNHV 120
WN+M+RAYIQ NSPH +LYK ML +GADNYTYPLLIQACSIRRSEWE KQVHNHV
Sbjct: 112 MWNMMIRAYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHV 171
Query: 121 LKLGFDSDVYVQNTLINLFSVCSNTTDARRVFDESSVLDSVSWNSILAGYVQIGNVEEAK 180
LKLGFDSDVYV+NTLIN FSVCSN TDARRVFDE+S+LDSVSWNSILAGYVQIGNVEEAK
Sbjct: 172 LKLGFDSDVYVRNTLINCFSVCSNMTDARRVFDENSILDSVSWNSILAGYVQIGNVEEAK 231
Query: 181 YMYDQMPERSIIASNSMIVLFGIKGLVAEACRLFDEMPEKDMVTWSALIACYEQNGMFEE 240
++Y QMPERSIIASNSMIVLFGIKGLV EAC+LFD M EKDMVTWSALIAC++QN MFEE
Sbjct: 232 HIYHQMPERSIIASNSMIVLFGIKGLVVEACKLFDAMLEKDMVTWSALIACFQQNEMFEE 291
Query: 241 AMRTFVGMHNVGVMVDEVVAVSALSACANLLIVNMGQLIHSLVLKVGIESYINLQNALIH 300
A+RTFVGMH +GVMVDEVVAVSALSACA+LLIVNMG+LIHSL LKVG ESYINLQNALI+
Sbjct: 292 AIRTFVGMHKIGVMVDEVVAVSALSACADLLIVNMGKLIHSLSLKVGTESYINLQNALIY 351
Query: 301 MYSKCGDILEARKLFDEAYLLDFISWNSMISGYLKCGLVENAKAIFDSMPKKDVVSWSSM 360
MYSKCGDI+ ARKLFDEAYLLD ISWNSMISGYLKC LV+NAKAIFDSMP+KDVVSWSSM
Sbjct: 352 MYSKCGDIVVARKLFDEAYLLDLISWNSMISGYLKCSLVDNAKAIFDSMPEKDVVSWSSM 411
Query: 361 ISGYAQHDLFYDTLTLFQEMQMNGFKPDETTLVSVISACTRLAAFEQGKWIHAYIKKNSL 420
ISGYAQHDLF ++L LFQEMQM+GFKPDE TLVSVISAC RLAA EQGKW+HAYIKKN L
Sbjct: 412 ISGYAQHDLFDESLALFQEMQMSGFKPDEATLVSVISACARLAALEQGKWVHAYIKKNGL 471
Query: 421 TVNVILGTTLIDMYMKCGCVESALEVFHEMDEKGVSTWNALILGLAMNGLVESSLDTFSN 480
T+NVILGTTLIDMYMKCGCVE+ALEVF+ M EKGVSTWNALILGLAMNGLVESSLD FSN
Sbjct: 472 TINVILGTTLIDMYMKCGCVETALEVFYGMIEKGVSTWNALILGLAMNGLVESSLDMFSN 531
Query: 481 MKKGHVAPNEITFVGVLSACRHMGLVDEGQHHFDSMIHDHKIKPNIKHYGCMVDLLGRAG 540
MKK HV PNEITFVGVL ACRHMGLVDEGQHHF SMIHDHKI+PN+KHYGCMVDLLGRAG
Sbjct: 532 MKKCHVTPNEITFVGVLGACRHMGLVDEGQHHFHSMIHDHKIQPNVKHYGCMVDLLGRAG 591
Query: 541 KLQEAEELLNRMPMAPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSN 600
KLQEAEELLNRMPM PDVATWGALLGACKKHGDSEMG+RVGRKLIELQPDHDGFHVLLSN
Sbjct: 592 KLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGKRVGRKLIELQPDHDGFHVLLSN 651
Query: 601 IYASKGKWDDVLEVRGMMTKHRVLKTPGCSMIEANGVVHEFLAGDKTHPDMDVIEDMLGQ 660
IYASKGKWDDVLE+RGMMTKHRVLK PGCSMIEANGV+HEFLAGDKTHP+MD IEDML +
Sbjct: 652 IYASKGKWDDVLEIRGMMTKHRVLKIPGCSMIEANGVIHEFLAGDKTHPNMDAIEDMLVE 711
Query: 661 MAMKLKLEGYTPDTNEVLLDVDEEEKESTLFRHSEKLAIAFGLINISPPTPIRIMKNLRI 720
MAMKLKLEGYTPDTNEVLLDVDEEEKESTLFRHSEKLAIAFGLINISPPTPIRIMKNLRI
Sbjct: 712 MAMKLKLEGYTPDTNEVLLDVDEEEKESTLFRHSEKLAIAFGLINISPPTPIRIMKNLRI 771
Query: 721 CNDCHTAAKLISKAFCRQIVVRDRHRFHHFEQGLCSCNDYW 762
CNDCHTAAKLISKAFCR+IVVRDRHRFHHFEQG CSC DYW
Sbjct: 772 CNDCHTAAKLISKAFCRKIVVRDRHRFHHFEQGFCSCKDYW 812
BLAST of Lcy10g006430 vs. ExPASy TrEMBL
Match:
A0A2I4EA65 (pentatricopeptide repeat-containing protein At3g62890-like OS=Juglans regia OX=51240 GN=LOC108987751 PE=3 SV=1)
HSP 1 Score: 1185.2 bits (3065), Expect = 0.0e+00
Identity = 568/758 (74.93%), Postives = 650/758 (85.75%), Query Frame = 0
Query: 4 CQDIKQFNQILSQMLLTGFIKDTYAASRLIKFSADFPFIHIDYSRQIFNLIENTNCFTWN 63
CQ KQ NQ+LSQM+ TGFI+DT+AASR++K SAD PF+HID+S QIFN I+N+N F WN
Sbjct: 29 CQSPKQLNQVLSQMIFTGFIRDTFAASRVLKCSADSPFVHIDHSLQIFNHIDNSNGFIWN 88
Query: 64 VMMRAYIQRNSPHLVLSLYKLMLLEQMGADNYTYPLLIQACSIRRSEWEGKQVHNHVLKL 123
MMRAY+QRNSP + LYKLML +G DNYTYP+L+QAC+IR SE+EGK++HNHVLK
Sbjct: 89 TMMRAYVQRNSPEKAICLYKLMLDRNVGCDNYTYPILVQACTIRLSEFEGKELHNHVLKT 148
Query: 124 GFDSDVYVQNTLINLFSVCSNTTDARRVFDESSVLDSVSWNSILAGYVQIGNVEEAKYMY 183
GFDSDVYVQNTLIN+++VC N DAR + DES VLDSVSWNSILAGYVQIG+V+ A Y+Y
Sbjct: 149 GFDSDVYVQNTLINMYAVCGNMGDARHLVDESPVLDSVSWNSILAGYVQIGDVDNANYIY 208
Query: 184 DQMPERSIIASNSMIVLFGIKGLVAEACRLFDEMPEKDMVTWSALIACYEQNGMFEEAMR 243
D MPER+ IASNSMIVLFG G + EA +LF+EMPEKDMV+WSALI+CYEQN M+EEA+
Sbjct: 209 DMMPERNTIASNSMIVLFGRTGRLIEALQLFNEMPEKDMVSWSALISCYEQNEMYEEALV 268
Query: 244 TFVGMHNVGVMVDEVVAVSALSACANLLIVNMGQLIHSLVLKVGIESYINLQNALIHMYS 303
F+ M G+MVDEVV VS LSACA+L +V +G++IH LV+K+GIESY+NLQNA IHMYS
Sbjct: 269 LFMKMKANGIMVDEVVVVSVLSACAHLSLVKIGKIIHGLVVKIGIESYVNLQNAFIHMYS 328
Query: 304 KCGDILEARKLFDEAYLLDFISWNSMISGYLKCGLVENAKAIFDSMPKKDVVSWSSMISG 363
CGDI+ ARKLF+ LD ISWNSMISGYLKCG VE AK +FDSMP KDVVSWS+MISG
Sbjct: 329 TCGDIIAARKLFNGGCHLDQISWNSMISGYLKCGSVEIAKELFDSMPNKDVVSWSAMISG 388
Query: 364 YAQHDLFYDTLTLFQEMQMNGFKPDETTLVSVISACTRLAAFEQGKWIHAYIKKNSLTVN 423
YAQHD F +TL LFQEMQ++G PDETTLVSVISACT LAA + GKWIHAYIKKN L VN
Sbjct: 389 YAQHDRFSETLALFQEMQLDGLSPDETTLVSVISACTHLAALDLGKWIHAYIKKNGLKVN 448
Query: 424 VILGTTLIDMYMKCGCVESALEVFHEMDEKGVSTWNALILGLAMNGLVESSLDTFSNMKK 483
VILGTTLIDMYMKCGCVE+ALEVF+ M E+ VSTWNALILGLA+NGLV+ SLD FS MK+
Sbjct: 449 VILGTTLIDMYMKCGCVENALEVFYGMVERWVSTWNALILGLAINGLVDKSLDMFSEMKR 508
Query: 484 GHVAPNEITFVGVLSACRHMGLVDEGQHHFDSMIHDHKIKPNIKHYGCMVDLLGRAGKLQ 543
V PNEITF+GVL ACRHMGLVDEG HF+SMI +HKI+PNIKHYGCMVDLLGRAG L+
Sbjct: 509 CGVEPNEITFMGVLGACRHMGLVDEGYRHFNSMIQEHKIEPNIKHYGCMVDLLGRAGMLK 568
Query: 544 EAEELLNRMPMAPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYA 603
EAE+L+ MPMAPDVATWGALLGACKKHGD++MG RVGRKLIE QPDHDGFHVLLSNIYA
Sbjct: 569 EAEQLIETMPMAPDVATWGALLGACKKHGDNKMGERVGRKLIEFQPDHDGFHVLLSNIYA 628
Query: 604 SKGKWDDVLEVRGMMTKHRVLKTPGCSMIEANGVVHEFLAGDKTHPDMDVIEDMLGQMAM 663
SKG WD LEVRGMM +H V+KTPGCSMIEA GVVHEFLAGDKTHP M IED L ++A
Sbjct: 629 SKGNWDGALEVRGMMMRHGVVKTPGCSMIEAKGVVHEFLAGDKTHPWMKEIEDKLDEIAK 688
Query: 664 KLKLEGYTPDTNEVLLDVDEEEKESTLFRHSEKLAIAFGLINISPPTPIRIMKNLRICND 723
KLK+EGY PDTNE+ LD+D+EEKE++LFRHSEKLAIAFGLI ISPPTPIRI+KNLRICND
Sbjct: 689 KLKMEGYAPDTNEISLDIDQEEKETSLFRHSEKLAIAFGLIAISPPTPIRIIKNLRICND 748
Query: 724 CHTAAKLISKAFCRQIVVRDRHRFHHFEQGLCSCNDYW 762
CH AAK IS+AF R+IV+RDRHRFHHF+QG CSC DYW
Sbjct: 749 CHAAAKFISRAFNREIVIRDRHRFHHFKQGSCSCTDYW 786
BLAST of Lcy10g006430 vs. NCBI nr
Match:
KAG6581225.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1429.1 bits (3698), Expect = 0.0e+00
Identity = 691/761 (90.80%), Postives = 721/761 (94.74%), Query Frame = 0
Query: 1 MKHCQDIKQFNQILSQMLLTGFIKDTYAASRLIKFSADFPFIHIDYSRQIFNLIENTNCF 60
MK CQ+IKQF+Q+LSQMLLTG I+DTYAASRLIKFS +FPFIHIDY+ +IFNLIENTNCF
Sbjct: 36 MKQCQNIKQFDQVLSQMLLTGLIRDTYAASRLIKFSTEFPFIHIDYTLRIFNLIENTNCF 95
Query: 61 TWNVMMRAYIQRNSPHLVLSLYKLMLLEQMGADNYTYPLLIQACSIRRSEWEGKQVHNHV 120
WN+MMRAYIQRNSPH LSLYK ML + + ADNYTYPLLIQACSIRRSEWEGKQVHNHV
Sbjct: 96 MWNMMMRAYIQRNSPHFALSLYKSMLFKYLEADNYTYPLLIQACSIRRSEWEGKQVHNHV 155
Query: 121 LKLGFDSDVYVQNTLINLFSVCSNTTDARRVFDESSVLDSVSWNSILAGYVQIGNVEEAK 180
+KLGFDSDVYVQNTLIN FSVCS +DARRVFDESSV DSVSWNSILAGYVQ+GNVEEAK
Sbjct: 156 MKLGFDSDVYVQNTLINFFSVCSKMSDARRVFDESSVSDSVSWNSILAGYVQVGNVEEAK 215
Query: 181 YMYDQMPERSIIASNSMIVLFGIKGLVAEACRLFDEMPEKDMVTWSALIACYEQNGMFEE 240
YMYDQMPE+SIIASNSMIVLFG KGLV EAC+LFDEMPE+DMVTWSALIACYEQN MFEE
Sbjct: 216 YMYDQMPEKSIIASNSMIVLFGNKGLVVEACKLFDEMPERDMVTWSALIACYEQNEMFEE 275
Query: 241 AMRTFVGMHNVGVMVDEVVAVSALSACANLLIVNMGQLIHSLVLKVGIESYINLQNALIH 300
AMRTFVGMH GVMVDEVV VSALSACANLLIVNMG+LIHSL LK+GIESYINLQNALIH
Sbjct: 276 AMRTFVGMHKFGVMVDEVVTVSALSACANLLIVNMGKLIHSLALKIGIESYINLQNALIH 335
Query: 301 MYSKCGDILEARKLFDEAYLLDFISWNSMISGYLKCGLVENAKAIFDSMPKKDVVSWSSM 360
MYSK GDI EARKLFDEAYLLD ISWNSMISGYLKCG VENAKAIFDSMPKKDVVSWSSM
Sbjct: 336 MYSKFGDITEARKLFDEAYLLDLISWNSMISGYLKCGFVENAKAIFDSMPKKDVVSWSSM 395
Query: 361 ISGYAQHDLFYDTLTLFQEMQMNGFKPDETTLVSVISACTRLAAFEQGKWIHAYIKKNSL 420
ISGYAQHDLFY+TLTLFQEMQMNGF+PDETTLVSVISACTRLAA EQGKW+HAYIKKN L
Sbjct: 396 ISGYAQHDLFYETLTLFQEMQMNGFRPDETTLVSVISACTRLAALEQGKWVHAYIKKNGL 455
Query: 421 TVNVILGTTLIDMYMKCGCVESALEVFHEMDEKGVSTWNALILGLAMNGLVESSLDTFSN 480
TVNVILGTTLIDMYMKCGCVESALEVF M EKGVSTWNALILGLAMNG VESSL+ FSN
Sbjct: 456 TVNVILGTTLIDMYMKCGCVESALEVFDGMVEKGVSTWNALILGLAMNGSVESSLEMFSN 515
Query: 481 MKKGHVAPNEITFVGVLSACRHMGLVDEGQHHFDSMIHDHKIKPNIKHYGCMVDLLGRAG 540
MKKGHV PNEITFVGVL ACRHMGLVDEG+HHF SMI+DHKI+PN+KHYGCMVDLLGRAG
Sbjct: 516 MKKGHVTPNEITFVGVLGACRHMGLVDEGRHHFHSMIYDHKIRPNVKHYGCMVDLLGRAG 575
Query: 541 KLQEAEELLNRMPMAPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSN 600
KLQEAEELLNRMPM PDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSN
Sbjct: 576 KLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSN 635
Query: 601 IYASKGKWDDVLEVRGMMTKHRVLKTPGCSMIEANGVVHEFLAGDKTHPDMDVIEDMLGQ 660
IYASKGKWDDVLE+RGMMTKHRVLKTPGCSMIEANGVVHEFLAGDKTHPDMD IEDMLGQ
Sbjct: 636 IYASKGKWDDVLEIRGMMTKHRVLKTPGCSMIEANGVVHEFLAGDKTHPDMDAIEDMLGQ 695
Query: 661 MAMKLKLEGYTPDTNEVLLDVDEEEKESTLFRHSEKLAIAFGLINISPPTPIRIMKNLRI 720
MAMKLKLEGYTPDTNEVLLDVDEEEKESTLFRHSEKLAIAFGLINISPPTPIRI+KNLRI
Sbjct: 696 MAMKLKLEGYTPDTNEVLLDVDEEEKESTLFRHSEKLAIAFGLINISPPTPIRIIKNLRI 755
Query: 721 CNDCHTAAKLISKAFCRQIVVRDRHRFHHFEQGLCSCNDYW 762
CNDCHTAAKLISKAFCRQIV+RDRHRFHHFE G+CSC DYW
Sbjct: 756 CNDCHTAAKLISKAFCRQIVLRDRHRFHHFEHGICSCKDYW 796
BLAST of Lcy10g006430 vs. NCBI nr
Match:
XP_022983674.1 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Cucurbita maxima])
HSP 1 Score: 1426.8 bits (3692), Expect = 0.0e+00
Identity = 690/761 (90.67%), Postives = 723/761 (95.01%), Query Frame = 0
Query: 1 MKHCQDIKQFNQILSQMLLTGFIKDTYAASRLIKFSADFPFIHIDYSRQIFNLIENTNCF 60
MK CQ+IKQF+Q+LSQMLLTG I+DTYAASRLIKFS DFPF HIDY+ +IFNLIENTNCF
Sbjct: 36 MKQCQNIKQFDQVLSQMLLTGLIRDTYAASRLIKFSTDFPFTHIDYTLRIFNLIENTNCF 95
Query: 61 TWNVMMRAYIQRNSPHLVLSLYKLMLLEQMGADNYTYPLLIQACSIRRSEWEGKQVHNHV 120
WN+MMRAYIQRNSPH L+LYK ML + + ADNYTYPLLIQACSIRRSE EGKQVHNHV
Sbjct: 96 MWNMMMRAYIQRNSPHFALNLYKSMLFKYLEADNYTYPLLIQACSIRRSEGEGKQVHNHV 155
Query: 121 LKLGFDSDVYVQNTLINLFSVCSNTTDARRVFDESSVLDSVSWNSILAGYVQIGNVEEAK 180
+KLGFDSDVYVQNTLIN FSVCSN +DARRVFDESSVLDSVSWNSIL+GYVQ+GNVEEAK
Sbjct: 156 MKLGFDSDVYVQNTLINFFSVCSNMSDARRVFDESSVLDSVSWNSILSGYVQVGNVEEAK 215
Query: 181 YMYDQMPERSIIASNSMIVLFGIKGLVAEACRLFDEMPEKDMVTWSALIACYEQNGMFEE 240
YMYDQMPE+SIIASNSMIVLFG KGLV EAC+LFDEMPE+DMVTWSALIACYEQN MFEE
Sbjct: 216 YMYDQMPEKSIIASNSMIVLFGNKGLVVEACKLFDEMPERDMVTWSALIACYEQNEMFEE 275
Query: 241 AMRTFVGMHNVGVMVDEVVAVSALSACANLLIVNMGQLIHSLVLKVGIESYINLQNALIH 300
AMRTFVGMH +GVMVDEVV VSALSACANLLIVNMG+LIHSL LK+GIESYINLQNALIH
Sbjct: 276 AMRTFVGMHKIGVMVDEVVTVSALSACANLLIVNMGKLIHSLALKIGIESYINLQNALIH 335
Query: 301 MYSKCGDILEARKLFDEAYLLDFISWNSMISGYLKCGLVENAKAIFDSMPKKDVVSWSSM 360
MYSK GDI+EARKLFDEAYLLD ISWNSMISGYLKCGLVENAKAIFDSMPKKDVVSWSSM
Sbjct: 336 MYSKFGDIMEARKLFDEAYLLDLISWNSMISGYLKCGLVENAKAIFDSMPKKDVVSWSSM 395
Query: 361 ISGYAQHDLFYDTLTLFQEMQMNGFKPDETTLVSVISACTRLAAFEQGKWIHAYIKKNSL 420
ISGYAQHDLFY+TLTLFQEMQMNGFKPDETTLVSVISACTRLAA EQGKW+HAYIKKN L
Sbjct: 396 ISGYAQHDLFYETLTLFQEMQMNGFKPDETTLVSVISACTRLAALEQGKWVHAYIKKNGL 455
Query: 421 TVNVILGTTLIDMYMKCGCVESALEVFHEMDEKGVSTWNALILGLAMNGLVESSLDTFSN 480
TVNVILGTTLIDMYMKCGC ESALEVF M EKGVSTWNALILGLAMNG VESSL+ FSN
Sbjct: 456 TVNVILGTTLIDMYMKCGCAESALEVFDGMVEKGVSTWNALILGLAMNGSVESSLEMFSN 515
Query: 481 MKKGHVAPNEITFVGVLSACRHMGLVDEGQHHFDSMIHDHKIKPNIKHYGCMVDLLGRAG 540
MKKGHVAPNEITFVGVL ACRHMGLVDEG+HHF SMI+DHKI+PN+KHYGCMVDLLGRAG
Sbjct: 516 MKKGHVAPNEITFVGVLGACRHMGLVDEGRHHFHSMIYDHKIRPNVKHYGCMVDLLGRAG 575
Query: 541 KLQEAEELLNRMPMAPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSN 600
KLQEAEELLNRMPM PDVATWGALLGACKKHGDSE+GRRVGRKLIELQPDHDGFHVLLSN
Sbjct: 576 KLQEAEELLNRMPMTPDVATWGALLGACKKHGDSELGRRVGRKLIELQPDHDGFHVLLSN 635
Query: 601 IYASKGKWDDVLEVRGMMTKHRVLKTPGCSMIEANGVVHEFLAGDKTHPDMDVIEDMLGQ 660
I ASKGKWDDVLE+RGMMTKHRVLKTPGCSMIEANGVVHEFLAGDKTHPDMD IEDMLGQ
Sbjct: 636 ICASKGKWDDVLEIRGMMTKHRVLKTPGCSMIEANGVVHEFLAGDKTHPDMDAIEDMLGQ 695
Query: 661 MAMKLKLEGYTPDTNEVLLDVDEEEKESTLFRHSEKLAIAFGLINISPPTPIRIMKNLRI 720
MAMKLKLEGYTPDTNEVLLDVDEEEKESTLFRHSEKLAIAFGLINISPPTPIRI+KNLRI
Sbjct: 696 MAMKLKLEGYTPDTNEVLLDVDEEEKESTLFRHSEKLAIAFGLINISPPTPIRIIKNLRI 755
Query: 721 CNDCHTAAKLISKAFCRQIVVRDRHRFHHFEQGLCSCNDYW 762
CNDCHTAAKLISKAFCRQIV+RDRHRFHHFE G+CSC DYW
Sbjct: 756 CNDCHTAAKLISKAFCRQIVLRDRHRFHHFEHGICSCKDYW 796
BLAST of Lcy10g006430 vs. NCBI nr
Match:
XP_022934101.1 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Cucurbita moschata])
HSP 1 Score: 1424.8 bits (3687), Expect = 0.0e+00
Identity = 691/761 (90.80%), Postives = 721/761 (94.74%), Query Frame = 0
Query: 1 MKHCQDIKQFNQILSQMLLTGFIKDTYAASRLIKFSADFPFIHIDYSRQIFNLIENTNCF 60
MK CQ+IKQF+Q+LSQMLLTG I+DTYAASRLIKFS +FPFIHIDY+ +IFNLIENTNCF
Sbjct: 36 MKQCQNIKQFDQVLSQMLLTGLIRDTYAASRLIKFSTEFPFIHIDYTLRIFNLIENTNCF 95
Query: 61 TWNVMMRAYIQRNSPHLVLSLYKLMLLEQMGADNYTYPLLIQACSIRRSEWEGKQVHNHV 120
WN+MMRAYIQRNSPH LSLYK ML + + ADNYTYPLLIQACSIRRSEWEGKQVHNHV
Sbjct: 96 MWNMMMRAYIQRNSPHFALSLYKSMLFKYLEADNYTYPLLIQACSIRRSEWEGKQVHNHV 155
Query: 121 LKLGFDSDVYVQNTLINLFSVCSNTTDARRVFDESSVLDSVSWNSILAGYVQIGNVEEAK 180
+KLGFDSDVYVQNTLIN FSVCSN +DARRVFDES+VLDSVSWNSILAGYVQ+GNVEEAK
Sbjct: 156 MKLGFDSDVYVQNTLINFFSVCSNMSDARRVFDESTVLDSVSWNSILAGYVQVGNVEEAK 215
Query: 181 YMYDQMPERSIIASNSMIVLFGIKGLVAEACRLFDEMPEKDMVTWSALIACYEQNGMFEE 240
MYDQMPE+SIIASNSMIVLFG KGLV EAC+LFDEMPE+DMVTWSALIACYEQN MFEE
Sbjct: 216 CMYDQMPEKSIIASNSMIVLFGNKGLVVEACKLFDEMPERDMVTWSALIACYEQNEMFEE 275
Query: 241 AMRTFVGMHNVGVMVDEVVAVSALSACANLLIVNMGQLIHSLVLKVGIESYINLQNALIH 300
AMRTFVGMH GVMVDEVV VSALSACANLLIVNMG+LIHSL LK+GIESYINLQNALIH
Sbjct: 276 AMRTFVGMHKFGVMVDEVVTVSALSACANLLIVNMGKLIHSLALKIGIESYINLQNALIH 335
Query: 301 MYSKCGDILEARKLFDEAYLLDFISWNSMISGYLKCGLVENAKAIFDSMPKKDVVSWSSM 360
MYSK GDI ARKLFDEAYLLD ISWNSMISGYLKCGLVENAKAIFDSMPKKDVVSWSSM
Sbjct: 336 MYSKFGDITVARKLFDEAYLLDLISWNSMISGYLKCGLVENAKAIFDSMPKKDVVSWSSM 395
Query: 361 ISGYAQHDLFYDTLTLFQEMQMNGFKPDETTLVSVISACTRLAAFEQGKWIHAYIKKNSL 420
ISGYAQHDLFY+TLTLFQEMQMNGFKPDETTLVSVISACTRLAA EQGKW+HAYIKKN L
Sbjct: 396 ISGYAQHDLFYETLTLFQEMQMNGFKPDETTLVSVISACTRLAALEQGKWVHAYIKKNGL 455
Query: 421 TVNVILGTTLIDMYMKCGCVESALEVFHEMDEKGVSTWNALILGLAMNGLVESSLDTFSN 480
TVNVILGTTLIDMYMKCGCVESALEVF M EKGVSTWNALILGLAMNG VESSL+ FSN
Sbjct: 456 TVNVILGTTLIDMYMKCGCVESALEVFDGMVEKGVSTWNALILGLAMNGSVESSLEMFSN 515
Query: 481 MKKGHVAPNEITFVGVLSACRHMGLVDEGQHHFDSMIHDHKIKPNIKHYGCMVDLLGRAG 540
MKKGHV PNEITFVGVL ACRHMGLVDEG+HHF SMI+DHKI+PN+K YGCMVDLLGRAG
Sbjct: 516 MKKGHVTPNEITFVGVLGACRHMGLVDEGRHHFHSMIYDHKIRPNVKLYGCMVDLLGRAG 575
Query: 541 KLQEAEELLNRMPMAPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSN 600
KLQEAEELLNRMPM PDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSN
Sbjct: 576 KLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSN 635
Query: 601 IYASKGKWDDVLEVRGMMTKHRVLKTPGCSMIEANGVVHEFLAGDKTHPDMDVIEDMLGQ 660
IYASKGKWDDVLE+RGMMTKHRVLKTPGCSMIEANGVVHEFLAGDKTHPDMD IEDMLGQ
Sbjct: 636 IYASKGKWDDVLEIRGMMTKHRVLKTPGCSMIEANGVVHEFLAGDKTHPDMDAIEDMLGQ 695
Query: 661 MAMKLKLEGYTPDTNEVLLDVDEEEKESTLFRHSEKLAIAFGLINISPPTPIRIMKNLRI 720
MAMKLKLEGYTPDTNEVLLDVDEEEKESTLFRHSEKLAIAFGLINISPPTPIRI+KNLRI
Sbjct: 696 MAMKLKLEGYTPDTNEVLLDVDEEEKESTLFRHSEKLAIAFGLINISPPTPIRIIKNLRI 755
Query: 721 CNDCHTAAKLISKAFCRQIVVRDRHRFHHFEQGLCSCNDYW 762
CNDCHTAAKLISKAFCRQIV+RDRHRFHHFE G+CSC DYW
Sbjct: 756 CNDCHTAAKLISKAFCRQIVLRDRHRFHHFEHGICSCKDYW 796
BLAST of Lcy10g006430 vs. NCBI nr
Match:
XP_023526340.1 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like isoform X2 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1423.3 bits (3683), Expect = 0.0e+00
Identity = 688/761 (90.41%), Postives = 720/761 (94.61%), Query Frame = 0
Query: 1 MKHCQDIKQFNQILSQMLLTGFIKDTYAASRLIKFSADFPFIHIDYSRQIFNLIENTNCF 60
MK CQ+IKQF+Q+LSQMLLTG I+DTYAASRLIKFS +FPFIHIDY+ +IFNLIENTNCF
Sbjct: 1 MKQCQNIKQFDQVLSQMLLTGLIRDTYAASRLIKFSTEFPFIHIDYTLRIFNLIENTNCF 60
Query: 61 TWNVMMRAYIQRNSPHLVLSLYKLMLLEQMGADNYTYPLLIQACSIRRSEWEGKQVHNHV 120
WN+MMRAYIQRNSPH LSLYK ML + + ADNYTYPLLIQACSIRRSEWEGKQVHNHV
Sbjct: 61 MWNMMMRAYIQRNSPHFALSLYKSMLFKYLEADNYTYPLLIQACSIRRSEWEGKQVHNHV 120
Query: 121 LKLGFDSDVYVQNTLINLFSVCSNTTDARRVFDESSVLDSVSWNSILAGYVQIGNVEEAK 180
+KLGFDSDVYVQNTLIN FSVCS +DARRVFDESSVLDSVSWNSILAGYVQIGNVEEAK
Sbjct: 121 MKLGFDSDVYVQNTLINFFSVCSKMSDARRVFDESSVLDSVSWNSILAGYVQIGNVEEAK 180
Query: 181 YMYDQMPERSIIASNSMIVLFGIKGLVAEACRLFDEMPEKDMVTWSALIACYEQNGMFEE 240
YMYDQMPE+SIIASNSMIVLFG KGLV EAC+LFDEMPE+DMVTWSALIACYEQN MFEE
Sbjct: 181 YMYDQMPEKSIIASNSMIVLFGNKGLVVEACKLFDEMPERDMVTWSALIACYEQNEMFEE 240
Query: 241 AMRTFVGMHNVGVMVDEVVAVSALSACANLLIVNMGQLIHSLVLKVGIESYINLQNALIH 300
AMRTF GMH GVMVDEVV VSALSACANLLIVNMG+LIHSL LK+GIESYINLQNALIH
Sbjct: 241 AMRTFAGMHKFGVMVDEVVTVSALSACANLLIVNMGKLIHSLALKIGIESYINLQNALIH 300
Query: 301 MYSKCGDILEARKLFDEAYLLDFISWNSMISGYLKCGLVENAKAIFDSMPKKDVVSWSSM 360
MYSK GDI+ ARKLFDEAYLLD ISWNS+ISGYLKCGLVENAK IFDSMPKKDVVSWSSM
Sbjct: 301 MYSKFGDIMVARKLFDEAYLLDLISWNSLISGYLKCGLVENAKTIFDSMPKKDVVSWSSM 360
Query: 361 ISGYAQHDLFYDTLTLFQEMQMNGFKPDETTLVSVISACTRLAAFEQGKWIHAYIKKNSL 420
ISGYAQHDLFY+TLTLFQEMQ+NGF+PDETTLVSVISACTRLAA EQGKW+HAYIK+N L
Sbjct: 361 ISGYAQHDLFYETLTLFQEMQLNGFRPDETTLVSVISACTRLAALEQGKWVHAYIKRNGL 420
Query: 421 TVNVILGTTLIDMYMKCGCVESALEVFHEMDEKGVSTWNALILGLAMNGLVESSLDTFSN 480
TVNVILGTTLIDMYMKCGCVESALEVF M EKGVSTWNALILGLAMNG VESSL+ FSN
Sbjct: 421 TVNVILGTTLIDMYMKCGCVESALEVFDGMVEKGVSTWNALILGLAMNGSVESSLEMFSN 480
Query: 481 MKKGHVAPNEITFVGVLSACRHMGLVDEGQHHFDSMIHDHKIKPNIKHYGCMVDLLGRAG 540
MKKGHV PNEITFVGVL ACRHMGLVDEG+HHF SMI+DHKIKPN+KHYGCMVDLLGRAG
Sbjct: 481 MKKGHVTPNEITFVGVLGACRHMGLVDEGRHHFHSMIYDHKIKPNVKHYGCMVDLLGRAG 540
Query: 541 KLQEAEELLNRMPMAPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSN 600
KLQEAEELLNRMPM PDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSN
Sbjct: 541 KLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSN 600
Query: 601 IYASKGKWDDVLEVRGMMTKHRVLKTPGCSMIEANGVVHEFLAGDKTHPDMDVIEDMLGQ 660
IYASKGKWDDVLE+RGMMTKHRVLKTPGCSMIEANGVVHEFLAGDKTHPDMD IEDMLGQ
Sbjct: 601 IYASKGKWDDVLEIRGMMTKHRVLKTPGCSMIEANGVVHEFLAGDKTHPDMDAIEDMLGQ 660
Query: 661 MAMKLKLEGYTPDTNEVLLDVDEEEKESTLFRHSEKLAIAFGLINISPPTPIRIMKNLRI 720
MAMKLKLEGYTPDTNEVLLDVDEEEKESTLFRHSEKLAIAFGLINIS PTPIRI+KNLRI
Sbjct: 661 MAMKLKLEGYTPDTNEVLLDVDEEEKESTLFRHSEKLAIAFGLINISSPTPIRIIKNLRI 720
Query: 721 CNDCHTAAKLISKAFCRQIVVRDRHRFHHFEQGLCSCNDYW 762
CNDCHTAAKLISKAFCRQIV+RDRHRFHHFE G+CSC DYW
Sbjct: 721 CNDCHTAAKLISKAFCRQIVLRDRHRFHHFEHGICSCKDYW 761
BLAST of Lcy10g006430 vs. NCBI nr
Match:
XP_023526339.1 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1423.3 bits (3683), Expect = 0.0e+00
Identity = 688/761 (90.41%), Postives = 720/761 (94.61%), Query Frame = 0
Query: 1 MKHCQDIKQFNQILSQMLLTGFIKDTYAASRLIKFSADFPFIHIDYSRQIFNLIENTNCF 60
MK CQ+IKQF+Q+LSQMLLTG I+DTYAASRLIKFS +FPFIHIDY+ +IFNLIENTNCF
Sbjct: 40 MKQCQNIKQFDQVLSQMLLTGLIRDTYAASRLIKFSTEFPFIHIDYTLRIFNLIENTNCF 99
Query: 61 TWNVMMRAYIQRNSPHLVLSLYKLMLLEQMGADNYTYPLLIQACSIRRSEWEGKQVHNHV 120
WN+MMRAYIQRNSPH LSLYK ML + + ADNYTYPLLIQACSIRRSEWEGKQVHNHV
Sbjct: 100 MWNMMMRAYIQRNSPHFALSLYKSMLFKYLEADNYTYPLLIQACSIRRSEWEGKQVHNHV 159
Query: 121 LKLGFDSDVYVQNTLINLFSVCSNTTDARRVFDESSVLDSVSWNSILAGYVQIGNVEEAK 180
+KLGFDSDVYVQNTLIN FSVCS +DARRVFDESSVLDSVSWNSILAGYVQIGNVEEAK
Sbjct: 160 MKLGFDSDVYVQNTLINFFSVCSKMSDARRVFDESSVLDSVSWNSILAGYVQIGNVEEAK 219
Query: 181 YMYDQMPERSIIASNSMIVLFGIKGLVAEACRLFDEMPEKDMVTWSALIACYEQNGMFEE 240
YMYDQMPE+SIIASNSMIVLFG KGLV EAC+LFDEMPE+DMVTWSALIACYEQN MFEE
Sbjct: 220 YMYDQMPEKSIIASNSMIVLFGNKGLVVEACKLFDEMPERDMVTWSALIACYEQNEMFEE 279
Query: 241 AMRTFVGMHNVGVMVDEVVAVSALSACANLLIVNMGQLIHSLVLKVGIESYINLQNALIH 300
AMRTF GMH GVMVDEVV VSALSACANLLIVNMG+LIHSL LK+GIESYINLQNALIH
Sbjct: 280 AMRTFAGMHKFGVMVDEVVTVSALSACANLLIVNMGKLIHSLALKIGIESYINLQNALIH 339
Query: 301 MYSKCGDILEARKLFDEAYLLDFISWNSMISGYLKCGLVENAKAIFDSMPKKDVVSWSSM 360
MYSK GDI+ ARKLFDEAYLLD ISWNS+ISGYLKCGLVENAK IFDSMPKKDVVSWSSM
Sbjct: 340 MYSKFGDIMVARKLFDEAYLLDLISWNSLISGYLKCGLVENAKTIFDSMPKKDVVSWSSM 399
Query: 361 ISGYAQHDLFYDTLTLFQEMQMNGFKPDETTLVSVISACTRLAAFEQGKWIHAYIKKNSL 420
ISGYAQHDLFY+TLTLFQEMQ+NGF+PDETTLVSVISACTRLAA EQGKW+HAYIK+N L
Sbjct: 400 ISGYAQHDLFYETLTLFQEMQLNGFRPDETTLVSVISACTRLAALEQGKWVHAYIKRNGL 459
Query: 421 TVNVILGTTLIDMYMKCGCVESALEVFHEMDEKGVSTWNALILGLAMNGLVESSLDTFSN 480
TVNVILGTTLIDMYMKCGCVESALEVF M EKGVSTWNALILGLAMNG VESSL+ FSN
Sbjct: 460 TVNVILGTTLIDMYMKCGCVESALEVFDGMVEKGVSTWNALILGLAMNGSVESSLEMFSN 519
Query: 481 MKKGHVAPNEITFVGVLSACRHMGLVDEGQHHFDSMIHDHKIKPNIKHYGCMVDLLGRAG 540
MKKGHV PNEITFVGVL ACRHMGLVDEG+HHF SMI+DHKIKPN+KHYGCMVDLLGRAG
Sbjct: 520 MKKGHVTPNEITFVGVLGACRHMGLVDEGRHHFHSMIYDHKIKPNVKHYGCMVDLLGRAG 579
Query: 541 KLQEAEELLNRMPMAPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSN 600
KLQEAEELLNRMPM PDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSN
Sbjct: 580 KLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSN 639
Query: 601 IYASKGKWDDVLEVRGMMTKHRVLKTPGCSMIEANGVVHEFLAGDKTHPDMDVIEDMLGQ 660
IYASKGKWDDVLE+RGMMTKHRVLKTPGCSMIEANGVVHEFLAGDKTHPDMD IEDMLGQ
Sbjct: 640 IYASKGKWDDVLEIRGMMTKHRVLKTPGCSMIEANGVVHEFLAGDKTHPDMDAIEDMLGQ 699
Query: 661 MAMKLKLEGYTPDTNEVLLDVDEEEKESTLFRHSEKLAIAFGLINISPPTPIRIMKNLRI 720
MAMKLKLEGYTPDTNEVLLDVDEEEKESTLFRHSEKLAIAFGLINIS PTPIRI+KNLRI
Sbjct: 700 MAMKLKLEGYTPDTNEVLLDVDEEEKESTLFRHSEKLAIAFGLINISSPTPIRIIKNLRI 759
Query: 721 CNDCHTAAKLISKAFCRQIVVRDRHRFHHFEQGLCSCNDYW 762
CNDCHTAAKLISKAFCRQIV+RDRHRFHHFE G+CSC DYW
Sbjct: 760 CNDCHTAAKLISKAFCRQIVLRDRHRFHHFEHGICSCKDYW 800
BLAST of Lcy10g006430 vs. TAIR 10
Match:
AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 615.1 bits (1585), Expect = 7.3e-176
Identity = 307/764 (40.18%), Postives = 461/764 (60.34%), Query Frame = 0
Query: 1 MKHCQDIKQFNQILSQMLLTGFIKDTYAASRLIKFSADFP-FIHIDYSRQIFNLIENTNC 60
+ +C+ ++ I +QM+ G YA S+LI+F P F + Y+ +F I+ N
Sbjct: 40 LHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNL 99
Query: 61 FTWNVMMRAYIQRNSPHLVLSLYKLMLLEQMGADNYTYPLLIQACSIRRSEWEGKQVHNH 120
WN M R + + P L LY M+ + ++YT+P ++++C+ ++ EG+Q+H H
Sbjct: 100 LIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGH 159
Query: 121 VLKLGFDSDVYVQNTLINLFSVCSNTTDARRVFDESSVLDSVSWNSILAGYVQIGNVEEA 180
VLKLG D D+YV +LI++ YVQ G +E+A
Sbjct: 160 VLKLGCDLDLYVHTSLISM-------------------------------YVQNGRLEDA 219
Query: 181 KYMYDQMPERSIIASNSMIVLFGIKGLVAEACRLFDEMPEKDMVTWSALIACYEQNGMFE 240
++D+ P R +++ ++I + +G + A +LFDE+P KD+V+W+A+I+ Y + G ++
Sbjct: 220 HKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYK 279
Query: 241 EAMRTFVGMHNVGVMVDEVVAVSALSACANLLIVNMGQLIHSLVLKVGIESYINLQNALI 300
EA+ F M V DE V+ +SACA + +G+ +H + G S + + NALI
Sbjct: 280 EALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALI 339
Query: 301 HMYSKCGDILEARKLFDEAYLLDFISWNSMISGYLKCGLVENAKAIFDSMPKKDVVSWSS 360
+YSKCG++ E A +F+ +P KDV+SW++
Sbjct: 340 DLYSKCGEL-------------------------------ETACGLFERLPYKDVISWNT 399
Query: 361 MISGYAQHDLFYDTLTLFQEMQMNGFKPDETTLVSVISACTRLAAFEQGKWIHAYIKK-- 420
+I GY +L+ + L LFQEM +G P++ T++S++ AC L A + G+WIH YI K
Sbjct: 400 LIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRL 459
Query: 421 NSLTVNVILGTTLIDMYMKCGCVESALEVFHEMDEKGVSTWNALILGLAMNGLVESSLDT 480
+T L T+LIDMY KCG +E+A +VF+ + K +S+WNA+I G AM+G ++S D
Sbjct: 460 KGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDL 519
Query: 481 FSNMKKGHVAPNEITFVGVLSACRHMGLVDEGQHHFDSMIHDHKIKPNIKHYGCMVDLLG 540
FS M+K + P++ITFVG+LSAC H G++D G+H F +M D+K+ P ++HYGCM+DLLG
Sbjct: 520 FSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLG 579
Query: 541 RAGKLQEAEELLNRMPMAPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVL 600
+G +EAEE++N M M PD W +LL ACK HG+ E+G LI+++P++ G +VL
Sbjct: 580 HSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVL 639
Query: 601 LSNIYASKGKWDDVLEVRGMMTKHRVLKTPGCSMIEANGVVHEFLAGDKTHPDMDVIEDM 660
LSNIYAS G+W++V + R ++ + K PGCS IE + VVHEF+ GDK HP I M
Sbjct: 640 LSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGM 699
Query: 661 LGQMAMKLKLEGYTPDTNEVLLDVDEEEKESTLFRHSEKLAIAFGLINISPPTPIRIMKN 720
L +M + L+ G+ PDT+EVL +++EE KE L HSEKLAIAFGLI+ P T + I+KN
Sbjct: 700 LEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKN 741
Query: 721 LRICNDCHTAAKLISKAFCRQIVVRDRHRFHHFEQGLCSCNDYW 762
LR+C +CH A KLISK + R+I+ RDR RFHHF G+CSCNDYW
Sbjct: 760 LRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
BLAST of Lcy10g006430 vs. TAIR 10
Match:
AT3G22690.2 (INVOLVED IN: photosystem II assembly, regulation of chlorophyll biosynthetic process, photosystem I assembly, thylakoid membrane organization, RNA modification; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1). )
HSP 1 Score: 562.8 bits (1449), Expect = 4.3e-160
Identity = 292/804 (36.32%), Postives = 464/804 (57.71%), Query Frame = 0
Query: 1 MKHCQDIKQFNQILSQMLLTGFIKDTYAASRLIKFSADFPFIH-IDYSRQIFNLIEN-TN 60
+K+C+ I + + G D ++L+ S + + +++++F E+
Sbjct: 39 LKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGT 98
Query: 61 CFTWNVMMRAYIQRNSPHLVLSLYKLMLLEQMGADNYTYPLLIQACSIRRSEWEGKQVHN 120
CF +N ++R Y + + L+ M+ + D YT+P + AC+ R++ G Q+H
Sbjct: 99 CFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHG 158
Query: 121 HVLKLGFDSDVYVQNTLINLFSVCSNTTDARRVFDESSVLDSVSWNSILAGYVQIGNVEE 180
++K+G+ D++VQN+L++ ++ C AR+VFDE S + VSW S++ GY + ++
Sbjct: 159 LIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKD 218
Query: 181 AKYMYDQMPERSIIASNSMIVLFGIK---------------------------------- 240
A ++ +M + NS+ ++ I
Sbjct: 219 AVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALV 278
Query: 241 ------GLVAEACRLFDEMPEKDMVTWSALIACYEQNGMFEEAMRTFVGMHNVGVMVDEV 300
+ A RLFDE ++ +A+ + Y + G+ EA+ F M + GV D +
Sbjct: 279 DMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRI 338
Query: 301 VAVSALSACANLLIVNMGQLIHSLVLKVGIESYINLQNALIHMYSKCGDILEARKLFDEA 360
+SA+S+C+ L + G+ H VL+ G ES+ N+ NALI MY KC A ++FD
Sbjct: 339 SMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRM 398
Query: 361 YLLDFISWNSMISGYLKCGLVENAKAIFDSMPKKDVVSWSSMISGYAQHDLFYDTLTLFQ 420
++WNS+++GY++ G V+ A F++MP+K++VSW+++ISG Q LF + + +F
Sbjct: 399 SNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFC 458
Query: 421 EMQ-MNGFKPDETTLVSVISACTRLAAFEQGKWIHAYIKKNSLTVNVILGTTLIDMYMKC 480
MQ G D T++S+ SAC L A + KWI+ YI+KN + ++V LGTTL+DM+ +C
Sbjct: 459 SMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRC 518
Query: 481 GCVESALEVFHEMDEKGVSTWNALILGLAMNGLVESSLDTFSNMKKGHVAPNEITFVGVL 540
G ESA+ +F+ + + VS W A I +AM G E +++ F +M + + P+ + FVG L
Sbjct: 519 GDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGAL 578
Query: 541 SACRHMGLVDEGQHHFDSMIHDHKIKPNIKHYGCMVDLLGRAGKLQEAEELLNRMPMAPD 600
+AC H GLV +G+ F SM+ H + P HYGCMVDLLGRAG L+EA +L+ MPM P+
Sbjct: 579 TACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPN 638
Query: 601 VATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEVRGM 660
W +LL AC+ G+ EM K+ L P+ G +VLLSN+YAS G+W+D+ +VR
Sbjct: 639 DVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLS 698
Query: 661 MTKHRVLKTPGCSMIEANGVVHEFLAGDKTHPDMDVIEDMLGQMAMKLKLEGYTPDTNEV 720
M + + K PG S I+ G HEF +GD++HP+M IE ML +++ + G+ PD + V
Sbjct: 699 MKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNV 758
Query: 721 LLDVDEEEKESTLFRHSEKLAIAFGLINISPPTPIRIMKNLRICNDCHTAAKLISKAFCR 762
L+DVDE+EK L RHSEKLA+A+GLI+ + T IRI+KNLR+C+DCH+ AK SK + R
Sbjct: 759 LMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNR 818
BLAST of Lcy10g006430 vs. TAIR 10
Match:
AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 560.5 bits (1443), Expect = 2.1e-159
Identity = 291/764 (38.09%), Postives = 443/764 (57.98%), Query Frame = 0
Query: 1 MKHCQDIKQFNQILSQMLLTGFIKDTYAASRLIKFSADFPFIHIDYSRQIFNLIENTNCF 60
++ C ++Q Q M+ TG D Y+AS+L +A F ++Y+R++F+ I N F
Sbjct: 37 IERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSF 96
Query: 61 TWNVMMRAYIQRNSPHLVLSLYKLMLLE-QMGADNYTYPLLIQACSIRRSEWEGKQVHNH 120
WN ++RAY P L + + M+ E Q + YT+P LI+A + S G+ +H
Sbjct: 97 AWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGM 156
Query: 121 VLKLGFDSDVYVQNTLINLFSVCSNTTDARRVFDESSVLDSVSWNSILAGYVQIGNVEEA 180
+K SDV+V N+LI+ + C + LDS
Sbjct: 157 AVKSAVGSDVFVANSLIHCYFSCGD-------------LDS------------------- 216
Query: 181 KYMYDQMPERSIIASNSMIVLFGIKGLVAEACRLFDEMPEKDMVTWSALIACYEQNGMFE 240
AC++F + EKD+V+W+++I + Q G +
Sbjct: 217 ------------------------------ACKVFTTIKEKDVVSWNSMINGFVQKGSPD 276
Query: 241 EAMRTFVGMHNVGVMVDEVVAVSALSACANLLIVNMGQLIHSLVLKVGIESYINLQNALI 300
+A+ F M + V V V LSACA + + G+ + S + + + + L NA++
Sbjct: 277 KALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAML 336
Query: 301 HMYSKCGDILEARKLFDEAYLLDFISWNSMISGYLKCGLVENAKAIFDSMPKKDVVSWSS 360
MY+KCG I +A++LFD D ++W +M+ GY E A+ + +SMP+KD+V+W++
Sbjct: 337 DMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNA 396
Query: 361 MISGYAQHDLFYDTLTLFQEMQM-NGFKPDETTLVSVISACTRLAAFEQGKWIHAYIKKN 420
+IS Y Q+ + L +F E+Q+ K ++ TLVS +SAC ++ A E G+WIH+YIKK+
Sbjct: 397 LISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKH 456
Query: 421 SLTVNVILGTTLIDMYMKCGCVESALEVFHEMDEKGVSTWNALILGLAMNGLVESSLDTF 480
+ +N + + LI MY KCG +E + EVF+ ++++ V W+A+I GLAM+G ++D F
Sbjct: 457 GIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMF 516
Query: 481 SNMKKGHVAPNEITFVGVLSACRHMGLVDEGQHHFDSMIHDHKIKPNIKHYGCMVDLLGR 540
M++ +V PN +TF V AC H GLVDE + F M ++ I P KHY C+VD+LGR
Sbjct: 517 YKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGR 576
Query: 541 AGKLQEAEELLNRMPMAPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLL 600
+G L++A + + MP+ P + WGALLGACK H + + +L+EL+P +DG HVLL
Sbjct: 577 SGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLL 636
Query: 601 SNIYASKGKWDDVLEVRGMMTKHRVLKTPGCSMIEANGVVHEFLAGDKTHPDMDVIEDML 660
SNIYA GKW++V E+R M + K PGCS IE +G++HEFL+GD HP + + L
Sbjct: 637 SNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKL 696
Query: 661 GQMAMKLKLEGYTPDTNEVLLDVDEEE-KESTLFRHSEKLAIAFGLINISPPTPIRIMKN 720
++ KLK GY P+ ++VL ++EEE KE +L HSEKLAI +GLI+ P IR++KN
Sbjct: 697 HEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKN 738
Query: 721 LRICNDCHTAAKLISKAFCRQIVVRDRHRFHHFEQGLCSCNDYW 762
LR+C DCH+ AKLIS+ + R+I+VRDR+RFHHF G CSCND+W
Sbjct: 757 LRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
BLAST of Lcy10g006430 vs. TAIR 10
Match:
AT3G22690.1 (CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012881), Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1); Has 49784 Blast hits to 14716 proteins in 280 species: Archae - 2; Bacteria - 10; Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0; Other Eukaryotes - 904 (source: NCBI BLink). )
HSP 1 Score: 558.5 bits (1438), Expect = 8.1e-159
Identity = 291/803 (36.24%), Postives = 463/803 (57.66%), Query Frame = 0
Query: 1 MKHCQDIKQFNQILSQMLLTGFIKDTYAASRLIKFSADFPFIH-IDYSRQIFNLIEN-TN 60
+K+C+ I + + G D ++L+ S + + +++++F E+
Sbjct: 39 LKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGT 98
Query: 61 CFTWNVMMRAYIQRNSPHLVLSLYKLMLLEQMGADNYTYPLLIQACSIRRSEWEGKQVHN 120
CF +N ++R Y + + L+ M+ + D YT+P + AC+ R++ G Q+H
Sbjct: 99 CFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHG 158
Query: 121 HVLKLGFDSDVYVQNTLINLFSVCSNTTDARRVFDESSVLDSVSWNSILAGYVQIGNVEE 180
++K+G+ D++VQN+L++ ++ C AR+VFDE S + VSW S++ GY + ++
Sbjct: 159 LIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKD 218
Query: 181 AKYMYDQMPERSIIASNSMIVLFGIK---------------------------------- 240
A ++ +M + NS+ ++ I
Sbjct: 219 AVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALV 278
Query: 241 ------GLVAEACRLFDEMPEKDMVTWSALIACYEQNGMFEEAMRTFVGMHNVGVMVDEV 300
+ A RLFDE ++ +A+ + Y + G+ EA+ F M + GV D +
Sbjct: 279 DMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRI 338
Query: 301 VAVSALSACANLLIVNMGQLIHSLVLKVGIESYINLQNALIHMYSKCGDILEARKLFDEA 360
+SA+S+C+ L + G+ H VL+ G ES+ N+ NALI MY KC A ++FD
Sbjct: 339 SMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRM 398
Query: 361 YLLDFISWNSMISGYLKCGLVENAKAIFDSMPKKDVVSWSSMISGYAQHDLFYDTLTLFQ 420
++WNS+++GY++ G V+ A F++MP+K++VSW+++ISG Q LF + + +F
Sbjct: 399 SNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFC 458
Query: 421 EMQ-MNGFKPDETTLVSVISACTRLAAFEQGKWIHAYIKKNSLTVNVILGTTLIDMYMKC 480
MQ G D T++S+ SAC L A + KWI+ YI+KN + ++V LGTTL+DM+ +C
Sbjct: 459 SMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRC 518
Query: 481 GCVESALEVFHEMDEKGVSTWNALILGLAMNGLVESSLDTFSNMKKGHVAPNEITFVGVL 540
G ESA+ +F+ + + VS W A I +AM G E +++ F +M + + P+ + FVG L
Sbjct: 519 GDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGAL 578
Query: 541 SACRHMGLVDEGQHHFDSMIHDHKIKPNIKHYGCMVDLLGRAGKLQEAEELLNRMPMAPD 600
+AC H GLV +G+ F SM+ H + P HYGCMVDLLGRAG L+EA +L+ MPM P+
Sbjct: 579 TACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPN 638
Query: 601 VATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEVRGM 660
W +LL AC+ G+ EM K+ L P+ G +VLLSN+YAS G+W+D+ +VR
Sbjct: 639 DVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLS 698
Query: 661 MTKHRVLKTPGCSMIEANGVVHEFLAGDKTHPDMDVIEDMLGQMAMKLKLEGYTPDTNEV 720
M + + K PG S I+ G HEF +GD++HP+M IE ML +++ + G+ PD + V
Sbjct: 699 MKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNV 758
Query: 721 LLDVDEEEKESTLFRHSEKLAIAFGLINISPPTPIRIMKNLRICNDCHTAAKLISKAFCR 761
L+DVDE+EK L RHSEKLA+A+GLI+ + T IRI+KNLR+C+DCH+ AK SK + R
Sbjct: 759 LMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNR 818
BLAST of Lcy10g006430 vs. TAIR 10
Match:
AT1G11290.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 509.2 bits (1310), Expect = 5.6e-144
Identity = 275/800 (34.38%), Postives = 426/800 (53.25%), Query Frame = 0
Query: 1 MKHCQDIKQFNQILSQMLLTGFIKDTYAASRLIKFSADFPFIHIDYSRQIFNLIENTNCF 60
++ C +K+ QIL + G ++ + ++L+ + +D + ++F I++
Sbjct: 44 LERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYG--SVDEAARVFEPIDSKLNV 103
Query: 61 TWNVMMRAYIQRNSPHLVLSLYKLMLLEQMGADNYTYPLLIQACSIRRSEWEGKQVHNHV 120
++ M++ + + + L + M + + Y + L++ C GK++H +
Sbjct: 104 LYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLL 163
Query: 121 LKLGFDSDVYVQNTLINLFSVCSNTTDARRVFDESSVLDSVSWNSILAGYVQIGNVEEAK 180
+K GF D++ L N+++ C +AR+VFD D VSWN+I+AGY Q G A
Sbjct: 164 VKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMAL 223
Query: 181 YMYDQMPERS---------------------------------------IIASNSMIVLF 240
M M E + + S +++ ++
Sbjct: 224 EMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMY 283
Query: 241 GIKGLVAEACRLFDEMPEKDMVTWSALIACYEQNGMFEEAMRTFVGMHNVGVMVDEVVAV 300
G + A +LFD M E+++V+W+++I Y QN +EAM F M + GV +V +
Sbjct: 284 AKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVM 343
Query: 301 SALSACANLLIVNMGQLIHSLVLKVGIESYINLQNALIHMYSKCGDILEARKLFDEAYLL 360
AL ACA+L + G+ IH L +++G++ +++ N+LI MY KC +
Sbjct: 344 GALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKE-------------- 403
Query: 361 DFISWNSMISGYLKCGLVENAKAIFDSMPKKDVVSWSSMISGYAQHDLFYDTLTLFQEMQ 420
V+ A ++F + + +VSW++MI G+AQ+ D L F +M+
Sbjct: 404 -----------------VDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMR 463
Query: 421 MNGFKPDETTLVSVISACTRLAAFEQGKWIHAYIKKNSLTVNVILGTTLIDMYMKCGCVE 480
KPD T VSVI+A L+ KWIH + ++ L NV + T L+DMY KCG +
Sbjct: 464 SRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIM 523
Query: 481 SALEVFHEMDEKGVSTWNALILGLAMNGLVESSLDTFSNMKKGHVAPNEITFVGVLSACR 540
A +F M E+ V+TWNA+I G +G +++L+ F M+KG + PN +TF+ V+SAC
Sbjct: 524 IARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACS 583
Query: 541 HMGLVDEGQHHFDSMIHDHKIKPNIKHYGCMVDLLGRAGKLQEAEELLNRMPMAPDVATW 600
H GLV+ G F M ++ I+ ++ HYG MVDLLGRAG+L EA + + +MP+ P V +
Sbjct: 584 HSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVY 643
Query: 601 GALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEVRGMMTKH 660
GA+LGAC+ H + + +L EL PD G+HVLL+NIY + W+ V +VR M +
Sbjct: 644 GAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQ 703
Query: 661 RVLKTPGCSMIEANGVVHEFLAGDKTHPDMDVIEDMLGQMAMKLKLEGYTPDTNEVLLDV 720
+ KTPGCSM+E VH F +G HPD I L ++ +K GY PDTN ++L V
Sbjct: 704 GLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTN-LVLGV 763
Query: 721 DEEEKESTLFRHSEKLAIAFGLINISPPTPIRIMKNLRICNDCHTAAKLISKAFCRQIVV 762
+ + KE L HSEKLAI+FGL+N + T I + KNLR+C DCH A K IS R+IVV
Sbjct: 764 ENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVV 809
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9LN01 | 1.0e-174 | 40.18 | Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... | [more] |
Q9LUJ2 | 6.1e-159 | 36.32 | Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana OX... | [more] |
O82380 | 3.0e-158 | 38.09 | Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... | [more] |
Q3E6Q1 | 7.9e-143 | 34.38 | Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop... | [more] |
Q9SHZ8 | 2.3e-142 | 37.45 | Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1J842 | 0.0e+00 | 90.67 | pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like OS=Cuc... | [more] |
A0A6J1F0X4 | 0.0e+00 | 90.80 | pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like OS=Cuc... | [more] |
A0A6J1DFB5 | 0.0e+00 | 88.70 | pentatricopeptide repeat-containing protein At3g62890 OS=Momordica charantia OX=... | [more] |
A0A1S4E1G8 | 0.0e+00 | 88.30 | pentatricopeptide repeat-containing protein At3g62890-like OS=Cucumis melo OX=36... | [more] |
A0A2I4EA65 | 0.0e+00 | 74.93 | pentatricopeptide repeat-containing protein At3g62890-like OS=Juglans regia OX=5... | [more] |
Match Name | E-value | Identity | Description | |
KAG6581225.1 | 0.0e+00 | 90.80 | Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... | [more] |
XP_022983674.1 | 0.0e+00 | 90.67 | pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Cucur... | [more] |
XP_022934101.1 | 0.0e+00 | 90.80 | pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Cucur... | [more] |
XP_023526340.1 | 0.0e+00 | 90.41 | pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like isofor... | [more] |
XP_023526339.1 | 0.0e+00 | 90.41 | pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like isofor... | [more] |
Match Name | E-value | Identity | Description | |
AT1G08070.1 | 7.3e-176 | 40.18 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G22690.2 | 4.3e-160 | 36.32 | INVOLVED IN: photosystem II assembly, regulation of chlorophyll biosynthetic pro... | [more] |
AT2G29760.1 | 2.1e-159 | 38.09 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G22690.1 | 8.1e-159 | 36.24 | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012... | [more] |
AT1G11290.1 | 5.6e-144 | 34.38 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |