Lcy10g006230 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTAACTCCTCCTTCATGTTCATCAATCCTTTATGTGCAGAAGCTGTTGCTGTTTTGGAGGGGCTTCAATTGGCTCATAGAATGAATATGAGACGAATTAAGATATTATCTGATTCATTTACTCTTGTCTCAATTCTGCATAAGGAGGTGGAATGTGATGCTAACATTGCTCCAGTCATTTGGGATATAGAGCAAACTAGAAATATGTTTGAGAGTGTTAAAATTTTTCATGTGAGTCATCAATATAATGTGATGACTCATAAATTGGCTCGTTCAGGTTTGTTTTTTGTTCCAAATTTGTGGATTACCAACTATCCAGATTGGATTTCTAAGTTGGTTGTTAGTGAGTTAATGAAACTTTTTTCCATTGTCTAAAAAAACCATTTTTTTCATCAAACAAAAGTTGGGTAGCCGTCGGTTTCATTCAACATGTTTTTCTACTGTAGTCCCAAAAAAAAAGAAAAAAAAAACATGTTTTTCTACCGTGTGAAAAATTAAGCAGAGAGAAAAAAAAAAAAGACAAAATGGTAATTTCACCCACTCAAAAGTCGAAAAAGAAAAACCTTTGCACTCAAAAGAAAAAGAAAAAAAAAAAAAAAAAAAAACCTCCTGAATCTCTTTAGCCCTCCTCTTATAGTCCCGTATTTGGCAAATTCCAATGAACATTACTCTCAGTTTTGAAATCAGATGATTTCGCCACCTCCATGAAGAAGAACCAGGTCTGCAACCTGCGAACCATTACTGGACCTTCCGATTCCATCATACTCTAAAACCCATTAGCTTTTCTCTGTTTTCTTCAACAACGGAAAAGAAGGAACAGTGGTAGGTTTCCTTTCAGTTCTGCCCTCACTCCTTCCTCAGCTTTTCTATGCAATTTGGGACAAATCCATTCTCTGGTTTCCACGTCGCCGCTTTATTGGATGGCGATATCTAGTTTGAGCGCGCAAAAATTGGTTTATTGTTATCACATTTTGCTGTGTTTCTATCTTTCGCCGTGCCCTTTTGTCTGTTGCAGAAAATTTTCGTTCTTTAACTTTAGGAGTGCAGGTGGGACTTGGAAGAAGTTCAAATTGGTTGCTCGATTTCGTTCGGGAGTACGGTTCCGGGAGTTGA ATGGTTAACTCCTCCTTCATGTTCATCAATCCTTTATGTGCAGAAGCTGTTGCTGTTTTGGAGGGGCTTCAATTGGCTCATAGAATGAATATGAGACGAATTAAGATATTATCTGATTCATTTACTCTTGTCTCAATTCTGCATAAGGAGGTGGAATGTGATGCTAACATTGCTCCAGTCATTTGGGATATAGAGCAAACTAGAAATATGTTTGAGAGTGTTAAAATTTTTCATGTGAGTCATCAATATAATGTGATGACTCATAAATTGGCTCGTTCAGGAGTGCAGGTGGGACTTGGAAGAAGTTCAAATTGGTTGCTCGATTTCGTTCGGGAGTACGGTTCCGGGAGTTGA ATGGTTAACTCCTCCTTCATGTTCATCAATCCTTTATGTGCAGAAGCTGTTGCTGTTTTGGAGGGGCTTCAATTGGCTCATAGAATGAATATGAGACGAATTAAGATATTATCTGATTCATTTACTCTTGTCTCAATTCTGCATAAGGAGGTGGAATGTGATGCTAACATTGCTCCAGTCATTTGGGATATAGAGCAAACTAGAAATATGTTTGAGAGTGTTAAAATTTTTCATGTGAGTCATCAATATAATGTGATGACTCATAAATTGGCTCGTTCAGGAGTGCAGGTGGGACTTGGAAGAAGTTCAAATTGGTTGCTCGATTTCGTTCGGGAGTACGGTTCCGGGAGTTGA MVNSSFMFINPLCAEAVAVLEGLQLAHRMNMRRIKILSDSFTLVSILHKEVECDANIAPVIWDIEQTRNMFESVKIFHVSHQYNVMTHKLARSGVQVGLGRSSNWLLDFVREYGSGS Homology
BLAST of Lcy10g006230 vs. ExPASy TrEMBL
Match: A0A6P6UBL0 (uncharacterized protein LOC113709083 OS=Coffea arabica OX=13443 GN=LOC113709083 PE=4 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 8.9e-04 Identity = 31/107 (28.97%), Postives = 57/107 (53.27%), Query Frame = 0
BLAST of Lcy10g006230 vs. ExPASy TrEMBL
Match: A0A2N9I609 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS47740 PE=4 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 8.9e-04 Identity = 26/82 (31.71%), Postives = 45/82 (54.88%), Query Frame = 0
BLAST of Lcy10g006230 vs. ExPASy TrEMBL
Match: A0A2N9EI79 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS2337 PE=4 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 8.9e-04 Identity = 31/94 (32.98%), Postives = 51/94 (54.26%), Query Frame = 0
BLAST of Lcy10g006230 vs. ExPASy TrEMBL
Match: A0A2N9EM29 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS3764 PE=4 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 8.9e-04 Identity = 31/94 (32.98%), Postives = 51/94 (54.26%), Query Frame = 0
BLAST of Lcy10g006230 vs. NCBI nr
Match: XP_017250619.1 (PREDICTED: uncharacterized protein LOC108221234 [Daucus carota subsp. sativus]) HSP 1 Score: 60.1 bits (144), Expect = 1.5e-05 Identity = 38/104 (36.54%), Postives = 53/104 (50.96%), Query Frame = 0
BLAST of Lcy10g006230 vs. NCBI nr
Match: XP_042974784.1 (uncharacterized protein LOC122306423 [Carya illinoinensis]) HSP 1 Score: 55.8 bits (133), Expect = 2.8e-04 Identity = 32/94 (34.04%), Postives = 50/94 (53.19%), Query Frame = 0
BLAST of Lcy10g006230 vs. NCBI nr
Match: XP_021722392.1 (uncharacterized protein LOC110689869 [Chenopodium quinoa]) HSP 1 Score: 54.3 bits (129), Expect = 8.2e-04 Identity = 31/112 (27.68%), Postives = 61/112 (54.46%), Query Frame = 0
BLAST of Lcy10g006230 vs. NCBI nr
Match: XP_042962672.1 (uncharacterized protein LOC122296942 [Carya illinoinensis]) HSP 1 Score: 54.3 bits (129), Expect = 8.2e-04 Identity = 31/94 (32.98%), Postives = 52/94 (55.32%), Query Frame = 0
BLAST of Lcy10g006230 vs. NCBI nr
Match: XP_042969199.1 (uncharacterized protein LOC122301911 [Carya illinoinensis]) HSP 1 Score: 54.3 bits (129), Expect = 8.2e-04 Identity = 27/78 (34.62%), Postives = 47/78 (60.26%), Query Frame = 0
BLAST of Lcy10g006230 vs. TAIR 10
Match: AT5G42965.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein ) HSP 1 Score: 43.1 bits (100), Expect = 1.8e-04 Identity = 23/70 (32.86%), Postives = 38/70 (54.29%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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