Lcy10g004920 (gene) Sponge gourd (P93075) v1

Overview
NameLcy10g004920
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Descriptionprotein STRICTOSIDINE SYNTHASE-LIKE 3
LocationChr10: 13003456 .. 13008285 (-)
RNA-Seq ExpressionLcy10g004920
SyntenyLcy10g004920
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTATAGTGGCCCGAACGGTGATGATGTCCATGGAGACACGGTCGGGAAACTCATCAACTGGCCATCGTCTTCGTGGGTTTCAACAACTTGTGTCCTTCAACACGATGATGATAAGGCGAGGACTACAAGTGGAGAATTATGCGAAGGCGATGAACCAGTGATAACACCTAATTCGTGCTATCTTATTACCTTTAACATAAGCTTGTTAGAAGAATTTTATGATTTAATTGTCTTAATTTTAGGTCCTTTGAGCATAGGTAGAATTGGGAGCCAACCACACGATTTGGTTTTAATTCGGGTCAATTAGGGAGTTTTTTAGTCCTCTCGAAGTTCTTGGACGACGAGGAGGTGAAAGGACCCGAGCGGATCGAAACGGGCCTGAAGAATTGCACCAAGATTCAAAGGTTGAAGCCCCATACCAAGAAAGATCGAGACAAAACCGAGAAAAAAGGCAGCAAGGCTAGAAAAGGGGTCAGTGTCCTAGCGTCTCGACGCCGACGCAAATTCTAGACGGATGAAATATCTGTTTAGGCAGCGTCTCGACGCTACAACGATTATTATAAATACTAGGGCTCGGTTTTGTCTGCCGTTAGGTTAGAAATTTCATATTTTTACGATATTCCTTTCACCTCTTTTTAGTTTTCTAAGTAGTTTAGACCTTTTAGGGTTGTTTTTAATGTATTCTTTTGGGATTTTTTGTGGTTTACCTTTCTTTATGAGTAGTTAAATCTTGTGGAATCGTTGGCTTGGGATTATACTTTGAATGTATTGAATACTTGGCTGAGTTTTCTAGTTTCTATTCAAGTTCTTTGTTGTTTGCTTGTGCTTTTCATGTAATCTTGTTTAAACCAATGCATATTATTAAGATCTTAGAATTGACGACTCTAGGAGATTAGTTTTGTGTATTCTATCAGTTATTTGAGATAGTCACTAGGTTGAGGCAAGTCCATCACTAATCTAACATGTTTAGTGTAGACTCTTGATAAGCCTAAGATGCATGATAAAAGTTGTATTGATTGAATCTGAATTTCTATTCTATTTGATTGATGCAATTTCGGACCCTTGTGTTTAAAACGACTAATTTATGTAAGCAATCACGAGATCTCGAGTTGTTTATTTTAGATTAGTTAGATATAGTTTGGTGATCATCGGGCTATGCATGTGGGGTAGCGGGCGAATATCTAAAATTAATTAATTATATTAGCTGCATGATCCTGGGTTAATGAATTAATTAAACACAGGTTAGTTAGGGGGATCCTCCGAGTAACCAAGAAGCACCACCGGGCTCATTTAAACTGCATGGAATATTTTTTTAGAGAAAACTAGGAAGCCAAGTAATAAGTCATTCAAGCATCATACCCCCAATCCAACGATCTTTTGCCTTTCATTGAATTTTATCTTAAATTCTCTTTGTTGCATGTTTTTCTTGTTTGGCTTAATTTTTATGTTCAATGCTTTATTTTATTTGTAACGTCTCGCGTTTCGAAATCGAGCCATTTTGGAATTGATTGGGTGTTCTTATTCTAATTTGAAAAATTAGAATTTAAGTTTAGCCTTGGGTCGTTAAAATAAATTTCTATAATTTAGGGAAAATAGATTTTTAACTAAATCTTTAATTCCTAAGTTTGGAGGTTTAATATTCGATATTTATTTTAAATATCAAAAGACGTAAATCCTTAATCAATTGAGTTATTTTCTTTCTCAAATCTTTTAGGAGCTAAGTTTGGGATTTTAAGATAAAATTCTAAATAAAACATAATTCCTAATTAAATTAGGATTTCTTTCTTAAGGTTTATCTATAATATTATATTAAAAAGCAAGGATTTGTGAAAAATATTTTTAGACTAAAATACCCATTTAAATTTAAGATAATTACTTTAGTTAAAATATAATTGTTTTAATTAAAAAATAAAATCAAAAAAATCAAAAAGTGGAAATAAAATTTCGTAATTGTTTTAATTGAAAAAAATTAAATATAAAAAAATGAAAACATCTTATCTTATTTGCTTTTATAAAAATAAAAAATACACAAATTTCGTATTAATTATTTTCATAATTAAAAATAAATTTAAGACAATTACTTTAGTTAAAATCTAATTGTTATAATTAAAAAACTAAAAGATAAAAAAAAAACAAGGAGTGGAAATCAAATTTCATGATTGTTTTAATTAAAAAAAAATAAAACAATCTTATCCTATTTGTTTTAATTACAAAAATAAAAGATAAAAAATGAAAACAAAAATTATCCTATCTGTTTTTATAAAAATAAAAATAACAACAAACAAACAAATTTCGTATTATATGTTTTAATAATTAAAAATAAATTTAAGATAATTACATTTAAGAAAAATAGTTTTGCAAGTTTAAAATCAATTTTTTTTCTTTTATTTTTATAATAAATATCAACTTCTATTAAAACTCTCTTCAAAATATCACACGTGATTTTAAAAAAAAATTAAAGAAAATTATTTATAGATATTTGTTATTCTTCTAATGTTTTTGTCTCTAATTTTATTTTTTTTCCTGCTTACCACTATTATAGTTTGAATATATTGGTTACAATTTGAATTTGAATTTTTTCAATTTAATTAGTTGGTGATTCCCGAATATTATATTATAATTAACAAGCTACAAATTTTTTGATATAATATTTTTTAATAGTCGTTCACACGTAAATTCAAATGAATGCGACACGTGGAATAAACTTTGATTTGTATTAATACTGTATGCGTGTGAGTATACAATCTCTAGTACATAATCCTCTGATTCTCTCTTGTGTGTGAATGTGTTTCACTCGAGGGCTAGAACGTTTGATCTCGAGTGTGAGGCTTCAATGGATCCTTGAAGCTTGAAGTCTTCTAAGTTTGAAAGAGTCTTCAGTCTTCAAGAAGTGTTCAGTACTTGGAAACTTATAGATTTTAGAGAGTCTTCAGTCTTCCGTTTTGGGAGAATTTCTCTGAATTCTCTAAGTCTGGTTGAGAGCTCCCAAATTCTGAACCCCGGAAATGATGGAGAACTCCTCTATTTATAGAGTTCTCGCAAGATGGGCCCTAGTGACTTTTGGGCCTAACAACTTGGGCTTGACCTTTATTAGTCTTGGGCTCAACCCTTTAGTCTTGAGTTTGATTCATATTTGACCCAAATACTTAAAAGACCCAAATTTGATCCAAATAATTATTATTTTTAATTAATTTTTCAAATTAATTAATTTGATCAAAATAATTTAATTTTAATTAATTGAACAAATAGAAATTTGACTCTATAAATTTATAATTGACCAACTTTGTTTTCAAATTAAATTTGGGACACATGTCAATTTATAATTGGTCCCAAATTTAATTAATTATAATTTCATCATTAATTTCATGTAATGACGTGACAATTTGTGATTGGTCAAAATTTCTTCTTCAACAAATGCCCCTTTTCGAGATTTAGACACAAATTATGTGTGGATGAATCTCAATTGGATTTTAATTCCATATTGAATTTTAGTCGTGTCCAAATTTTATGTAACTTTGAATTTGGAGTAATTTCTCTCTATTTTGAATTTGACTCGAGTTTAATTTGGAGCTGAATTATGATTAGGCCCAAATTATCTCAAGATAAACTCAATCTCAAATACCTTGAATTTCAAATAAGGCTTGAAAAAAAAAATTAGTTGGAGTAATGTTAAATTCTATCCAAAATTTTGTTTGAGGAATAGTATTCTAAAATATGCCCCTTTGATTTAGATTTAGCTAAGAGTTTAGCTATACCGATTTTAATTTAATTTAAATCAAATCAAATTCGAAATTTATCCAATTTATCTTACTTTAAAATTGGACCAATTTGAATTTCTATTCAAAATTGATTTAAATCAAATTTCCCACTTAAATTACGATTTGAATTGGCACTCGGATCTAATTAGAGATAAGATTCAATTTATAATCAAATAAGATATTATCTTTACCTTATTTGAATCTAAGATCATTCTTCTATAAATAGCCACAATATACCCTCCTTCCATTCACGTTTGGTTGTACGTTTCCATTTGAGTATCCGGTTTGACAAGAAAACATGCGATTTATACATTGTTGATGCATACTTTGGGCTGATGAACGTCGGACCTGAAGGGGGATCTGGCAACATCTCTTGCAACTGAAGCCGAAGGAGTGCCATTCAAGCTTACCAATCATCTAGACCTTGATGACAAAGGGAATGTATACTTTATAGATAGCAGCACCAAACACCACAGAAGGTAAGCCATGGTGATTTTCTCTTGCTAATTACCAAAATATTAGGGATGGATTCATAGTAAGCAGACTTCCTAATTACTATGGTGATTTTCTTGTTGGTCACCATTGTATAGAGGAGGGATTTGTGAAAATCGAAAGCAAAAGTAAAACTCGTTTGTAGAACTAAACAAGGAGCAGGGGAATGAAGAATGTTGTTTATGTTCAAGACAACATTGGATTTTTCTTCTTATAAACCAAAATTTCAATTTCTTATAACATTCTGTTGTTAACTACACTGATTATTAGAACACTCAACGAACTGCTTGGTACTTGCGTTGTTTAGCTTTGTGATCGCTGTGTGTTTAGTTTTCTTGCTGCTTGTCTCTGAACTCTGAAGGCAACAAACCTACTAATAGTTCTAATTCCTATATTTCTTGTGCAGGAACTTCTTACAAGTAGTTTATTATTATGTTTTTGTTGAAAACACCGGGAGAGTTTTGAAATACAATGTTGCTACTGGACAAACCACTGTGCTTGTGAGGGATGTCTCTAAACAAGGACGGTTCATTCTTTGTCTTCTGCGAAGGGTCCAAAGGAAGGTGAAAACTCTATAA

mRNA sequence

ATGTATAGTGGCCCGAACGGTGATGATGTCCATGGAGACACGGTCGGGAAACTCATCAACTGGCCATCGTCTTCGTGGGGGGATCTGGCAACATCTCTTGCAACTGAAGCCGAAGGAGTGCCATTCAAGCTTACCAATCATCTAGACCTTGATGACAAAGGGAATGTATACTTTATAGATAGCAGCACCAAACACCACAGAAGGAACTTCTTACAAGTAGTTTATTATTATGTTTTTGTTGAAAACACCGGGAGAGTTTTGAAATACAATGTTGCTACTGGACAAACCACTGTGCTTGTGAGGGATGTCTCTAAACAAGGACGGTTCATTCTTTGTCTTCTGCGAAGGGTCCAAAGGAAGGTGAAAACTCTATAA

Coding sequence (CDS)

ATGTATAGTGGCCCGAACGGTGATGATGTCCATGGAGACACGGTCGGGAAACTCATCAACTGGCCATCGTCTTCGTGGGGGGATCTGGCAACATCTCTTGCAACTGAAGCCGAAGGAGTGCCATTCAAGCTTACCAATCATCTAGACCTTGATGACAAAGGGAATGTATACTTTATAGATAGCAGCACCAAACACCACAGAAGGAACTTCTTACAAGTAGTTTATTATTATGTTTTTGTTGAAAACACCGGGAGAGTTTTGAAATACAATGTTGCTACTGGACAAACCACTGTGCTTGTGAGGGATGTCTCTAAACAAGGACGGTTCATTCTTTGTCTTCTGCGAAGGGTCCAAAGGAAGGTGAAAACTCTATAA

Protein sequence

MYSGPNGDDVHGDTVGKLINWPSSSWGDLATSLATEAEGVPFKLTNHLDLDDKGNVYFIDSSTKHHRRNFLQVVYYYVFVENTGRVLKYNVATGQTTVLVRDVSKQGRFILCLLRRVQRKVKTL
Homology
[Close]
BLAST of Lcy10g004920 vs. ExPASy Swiss-Prot
Match: Q8VWF6 (Protein STRICTOSIDINE SYNTHASE-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=SSL3 PE=2 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 3.0e-15
Identity = 42/77 (54.55%), Postives = 56/77 (72.73%), Query Frame = 0 

Query: 27  GDLATSLATEAEGVPFKLTNHLDLDDKGNVYFIDSSTKHHRRNFLQVVYYYVFVENTGRV 86
           G LATS+  EA+GVP + TN LD+DD+GNVYF DSS+   RR F+ ++   V  E++GRV
Sbjct: 160 GGLATSVTNEADGVPLRFTNDLDIDDEGNVYFTDSSSFFQRRKFMLLI---VSGEDSGRV 219

Query: 87  LKYNVATGQTTVLVRDV 104
           LKYN  T +TT LVR++
Sbjct: 220 LKYNPKTKETTTLVRNL 233

[Close]
BLAST of Lcy10g004920 vs. ExPASy Swiss-Prot
Match: Q4V3D9 (Protein STRICTOSIDINE SYNTHASE-LIKE 10 OS=Arabidopsis thaliana OX=3702 GN=SSL10 PE=2 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 8.4e-10
Identity = 35/79 (44.30%), Postives = 53/79 (67.09%), Query Frame = 0 

Query: 27  GDLATSLATEAEGVPFKLTNHLDLDDKGNV-YFIDSSTKHHRRNFLQVVYYYVFVENTGR 86
           G LA  L TEAEG PF+ TN LD+D++ +V YF D+S +  RR FL  V   + V+ TGR
Sbjct: 144 GGLAKPLVTEAEGQPFRFTNDLDIDEQEDVIYFTDTSARFQRRQFLAAV---LNVDKTGR 203

Query: 87  VLKYNVATGQTTVLVRDVS 105
            +KY+ ++ + TVL++ ++
Sbjct: 204 FIKYDRSSKKATVLLQGLA 219

[Close]
BLAST of Lcy10g004920 vs. ExPASy Swiss-Prot
Match: P68174 (Strictosidine synthase (Fragment) OS=Rauvolfia mannii OX=4062 GN=STR1 PE=3 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 2.5e-06
Identity = 32/84 (38.10%), Postives = 50/84 (59.52%), Query Frame = 0 

Query: 25  SWGDLATSLATEAEGVPFKLTNHLDLDDK-GNVYFIDSSTKHHRRNFLQVVYYYVFVENT 84
           S G  AT LAT  +GVPFK    + +D + G VYF D ST +  R   Q++      + T
Sbjct: 128 SEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIM---DTSDKT 187

Query: 85  GRVLKYNVATGQTTVLVRDVSKQG 108
           GR++KY+ +T +TT+L++++   G
Sbjct: 188 GRLIKYDPSTKETTLLLKELHVPG 208

[Close]
BLAST of Lcy10g004920 vs. ExPASy Swiss-Prot
Match: P68175 (Strictosidine synthase OS=Rauvolfia serpentina OX=4060 GN=STR1 PE=1 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 2.5e-06
Identity = 32/84 (38.10%), Postives = 50/84 (59.52%), Query Frame = 0 

Query: 25  SWGDLATSLATEAEGVPFKLTNHLDLDDK-GNVYFIDSSTKHHRRNFLQVVYYYVFVENT 84
           S G  AT LAT  +GVPFK    + +D + G VYF D ST +  R   Q++      + T
Sbjct: 130 SEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIM---DTSDKT 189

Query: 85  GRVLKYNVATGQTTVLVRDVSKQG 108
           GR++KY+ +T +TT+L++++   G
Sbjct: 190 GRLIKYDPSTKETTLLLKELHVPG 210

[Close]
BLAST of Lcy10g004920 vs. ExPASy Swiss-Prot
Match: Q9SD07 (Protein STRICTOSIDINE SYNTHASE-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=SSL4 PE=1 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 3.7e-05
Identity = 33/107 (30.84%), Postives = 57/107 (53.27%), Query Frame = 0 

Query: 24  SSWGDLATSLATEAEGVPFKLTNHLDLDDKGNVYFIDSSTKHHRRNFLQVVYYYVFVENT 83
           S  G     L  EA+GV FKLT+ + + D G +YF D+S+K+   +F Q ++ ++  +  
Sbjct: 139 SDGGKKTELLTDEADGVRFKLTDAVTVADNGVLYFTDASSKY---DFYQFIFDFLEGKPH 198

Query: 84  GRVLKYNVATGQTTVLVRDV---------SKQGRFILC--LLRRVQR 120
           GRV+ ++  T  T VL++D+           Q  F+ C  ++RR  +
Sbjct: 199 GRVMSFDPTTRATRVLLKDLYFANGISMSPDQTHFVFCETIMRRCSK 242

[Close]
BLAST of Lcy10g004920 vs. ExPASy TrEMBL
Match: A0A5A7UXA6 (Protein STRICTOSIDINE SYNTHASE-LIKE 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G001590 PE=3 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 1.4e-23
Identity = 63/93 (67.74%), Postives = 71/93 (76.34%), Query Frame = 0 

Query: 27  GDLATSLATEAEGVPFKLTNHLDLDDKGNVYFIDSSTKHHRRNFLQVVYYYVFVENTGRV 86
           G LATSL+TEAEGVPFK  N LDLDD+GNVYF DSSTK+HRRNF+QVV+     ENTGR+
Sbjct: 172 GGLATSLSTEAEGVPFKFINDLDLDDEGNVYFTDSSTKYHRRNFIQVVF---SAENTGRL 231

Query: 87  LKYNVATGQTTVLVRD--------VSKQGRFIL 112
           LKYN ATG+TTVLVRD        +SK G F L
Sbjct: 232 LKYNAATGETTVLVRDLYFPNGVSLSKDGSFFL 261

[Close]
BLAST of Lcy10g004920 vs. ExPASy TrEMBL
Match: A0A1S3BVV7 (protein STRICTOSIDINE SYNTHASE-LIKE 3 OS=Cucumis melo OX=3656 GN=LOC103494202 PE=3 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 1.4e-23
Identity = 63/93 (67.74%), Postives = 71/93 (76.34%), Query Frame = 0 

Query: 27  GDLATSLATEAEGVPFKLTNHLDLDDKGNVYFIDSSTKHHRRNFLQVVYYYVFVENTGRV 86
           G LATSL+TEAEGVPFK  N LDLDD+GNVYF DSSTK+HRRNF+QVV+     ENTGR+
Sbjct: 172 GGLATSLSTEAEGVPFKFINDLDLDDEGNVYFTDSSTKYHRRNFIQVVF---SAENTGRL 231

Query: 87  LKYNVATGQTTVLVRD--------VSKQGRFIL 112
           LKYN ATG+TTVLVRD        +SK G F L
Sbjct: 232 LKYNAATGETTVLVRDLYFPNGVSLSKDGSFFL 261

[Close]
BLAST of Lcy10g004920 vs. ExPASy TrEMBL
Match: A0A6J1E0U7 (protein STRICTOSIDINE SYNTHASE-LIKE 3-like OS=Cucurbita moschata OX=3662 GN=LOC111429789 PE=3 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 6.9e-23
Identity = 59/77 (76.62%), Postives = 66/77 (85.71%), Query Frame = 0 

Query: 27  GDLATSLATEAEGVPFKLTNHLDLDDKGNVYFIDSSTKHHRRNFLQVVYYYVFVENTGRV 86
           G LATS++TEAEGVPFK TN LDLDD+GNVYF D+STK+ RRNFLQVV+     ENTGRV
Sbjct: 172 GGLATSVSTEAEGVPFKFTNDLDLDDEGNVYFTDTSTKYSRRNFLQVVF---SAENTGRV 231

Query: 87  LKYNVATGQTTVLVRDV 104
           LKYN ATG+TTVLVRDV
Sbjct: 232 LKYNAATGETTVLVRDV 245

[Close]
BLAST of Lcy10g004920 vs. ExPASy TrEMBL
Match: A0A6J1JD63 (protein STRICTOSIDINE SYNTHASE-LIKE 3 OS=Cucurbita maxima OX=3661 GN=LOC111485721 PE=3 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 1.2e-22
Identity = 59/77 (76.62%), Postives = 65/77 (84.42%), Query Frame = 0 

Query: 27  GDLATSLATEAEGVPFKLTNHLDLDDKGNVYFIDSSTKHHRRNFLQVVYYYVFVENTGRV 86
           G LATSL+TEAEGVPFK TN LDLDD+GNVYF D+STK+ RRNFLQVV+     ENTGRV
Sbjct: 172 GGLATSLSTEAEGVPFKFTNDLDLDDEGNVYFTDTSTKYPRRNFLQVVF---SAENTGRV 231

Query: 87  LKYNVATGQTTVLVRDV 104
           LKYN  TG+TTVLVRDV
Sbjct: 232 LKYNATTGETTVLVRDV 245

[Close]
BLAST of Lcy10g004920 vs. ExPASy TrEMBL
Match: A0A0A0LSY4 (Str_synth domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G025790 PE=3 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 1.2e-22
Identity = 62/93 (66.67%), Postives = 70/93 (75.27%), Query Frame = 0 

Query: 27  GDLATSLATEAEGVPFKLTNHLDLDDKGNVYFIDSSTKHHRRNFLQVVYYYVFVENTGRV 86
           G LATSL+TEAEGVPFK  N LDLDD+GNVYF DSSTK+ RRNF+QVV+     ENTGR+
Sbjct: 172 GGLATSLSTEAEGVPFKFINDLDLDDEGNVYFTDSSTKYERRNFIQVVF---SAENTGRL 231

Query: 87  LKYNVATGQTTVLVRD--------VSKQGRFIL 112
           LKYN ATG+TTVLVRD        +SK G F L
Sbjct: 232 LKYNAATGETTVLVRDLHFPNGVSLSKDGSFFL 261

[Close]
BLAST of Lcy10g004920 vs. NCBI nr
Match: XP_008453519.1 (PREDICTED: protein STRICTOSIDINE SYNTHASE-LIKE 3 [Cucumis melo] >KAA0058159.1 protein STRICTOSIDINE SYNTHASE-LIKE 3 [Cucumis melo var. makuwa] >TYK28517.1 protein STRICTOSIDINE SYNTHASE-LIKE 3 [Cucumis melo var. makuwa])

HSP 1 Score: 119.0 bits (297), Expect = 2.9e-23
Identity = 63/93 (67.74%), Postives = 71/93 (76.34%), Query Frame = 0 

Query: 27  GDLATSLATEAEGVPFKLTNHLDLDDKGNVYFIDSSTKHHRRNFLQVVYYYVFVENTGRV 86
           G LATSL+TEAEGVPFK  N LDLDD+GNVYF DSSTK+HRRNF+QVV+     ENTGR+
Sbjct: 172 GGLATSLSTEAEGVPFKFINDLDLDDEGNVYFTDSSTKYHRRNFIQVVF---SAENTGRL 231

Query: 87  LKYNVATGQTTVLVRD--------VSKQGRFIL 112
           LKYN ATG+TTVLVRD        +SK G F L
Sbjct: 232 LKYNAATGETTVLVRDLYFPNGVSLSKDGSFFL 261

[Close]
BLAST of Lcy10g004920 vs. NCBI nr
Match: XP_038878317.1 (protein STRICTOSIDINE SYNTHASE-LIKE 3-like [Benincasa hispida])

HSP 1 Score: 118.2 bits (295), Expect = 4.9e-23
Identity = 63/93 (67.74%), Postives = 71/93 (76.34%), Query Frame = 0 

Query: 27  GDLATSLATEAEGVPFKLTNHLDLDDKGNVYFIDSSTKHHRRNFLQVVYYYVFVENTGRV 86
           G LATSL+TEAEGVPFK TN LDLD++GNVYF DSSTK+HRRNFL VV+     EN+GRV
Sbjct: 172 GGLATSLSTEAEGVPFKFTNDLDLDEEGNVYFTDSSTKYHRRNFLHVVF---SAENSGRV 231

Query: 87  LKYNVATGQTTVLVRDV--------SKQGRFIL 112
           LKYN ATG+TTVLVRDV        SK G F +
Sbjct: 232 LKYNAATGETTVLVRDVYFPNGVSLSKDGSFFV 261

[Close]
BLAST of Lcy10g004920 vs. NCBI nr
Match: XP_022921564.1 (protein STRICTOSIDINE SYNTHASE-LIKE 3-like [Cucurbita moschata])

HSP 1 Score: 116.7 bits (291), Expect = 1.4e-22
Identity = 59/77 (76.62%), Postives = 66/77 (85.71%), Query Frame = 0 

Query: 27  GDLATSLATEAEGVPFKLTNHLDLDDKGNVYFIDSSTKHHRRNFLQVVYYYVFVENTGRV 86
           G LATS++TEAEGVPFK TN LDLDD+GNVYF D+STK+ RRNFLQVV+     ENTGRV
Sbjct: 172 GGLATSVSTEAEGVPFKFTNDLDLDDEGNVYFTDTSTKYSRRNFLQVVF---SAENTGRV 231

Query: 87  LKYNVATGQTTVLVRDV 104
           LKYN ATG+TTVLVRDV
Sbjct: 232 LKYNAATGETTVLVRDV 245

[Close]
BLAST of Lcy10g004920 vs. NCBI nr
Match: KAG6589649.1 (Protein STRICTOSIDINE SYNTHASE-LIKE 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 116.7 bits (291), Expect = 1.4e-22
Identity = 59/77 (76.62%), Postives = 66/77 (85.71%), Query Frame = 0 

Query: 27  GDLATSLATEAEGVPFKLTNHLDLDDKGNVYFIDSSTKHHRRNFLQVVYYYVFVENTGRV 86
           G +ATSL+TEAEGVPFK TN LDLDD+GNVYF D+STK+ RRNFLQVV+     ENTGRV
Sbjct: 172 GGVATSLSTEAEGVPFKFTNDLDLDDEGNVYFTDTSTKYSRRNFLQVVF---SAENTGRV 231

Query: 87  LKYNVATGQTTVLVRDV 104
           LKYN ATG+TTVLVRDV
Sbjct: 232 LKYNAATGETTVLVRDV 245

[Close]
BLAST of Lcy10g004920 vs. NCBI nr
Match: KAG6589647.1 (Protein STRICTOSIDINE SYNTHASE-LIKE 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 116.3 bits (290), Expect = 1.9e-22
Identity = 59/77 (76.62%), Postives = 66/77 (85.71%), Query Frame = 0 

Query: 27  GDLATSLATEAEGVPFKLTNHLDLDDKGNVYFIDSSTKHHRRNFLQVVYYYVFVENTGRV 86
           G LATSL+TEAEGVPFK TN LDLD++GNVYF D+STK+ RRNFLQVV+     ENTGRV
Sbjct: 172 GGLATSLSTEAEGVPFKFTNDLDLDEEGNVYFTDTSTKYSRRNFLQVVF---SAENTGRV 231

Query: 87  LKYNVATGQTTVLVRDV 104
           LKYN ATG+TTVLVRDV
Sbjct: 232 LKYNAATGETTVLVRDV 245

[Close]
BLAST of Lcy10g004920 vs. TAIR 10
Match: AT1G08470.1 (strictosidine synthase-like 3 )

HSP 1 Score: 82.8 bits (203), Expect = 2.1e-16
Identity = 42/77 (54.55%), Postives = 56/77 (72.73%), Query Frame = 0 

Query: 27  GDLATSLATEAEGVPFKLTNHLDLDDKGNVYFIDSSTKHHRRNFLQVVYYYVFVENTGRV 86
           G LATS+  EA+GVP + TN LD+DD+GNVYF DSS+   RR F+ ++   V  E++GRV
Sbjct: 160 GGLATSVTNEADGVPLRFTNDLDIDDEGNVYFTDSSSFFQRRKFMLLI---VSGEDSGRV 219

Query: 87  LKYNVATGQTTVLVRDV 104
           LKYN  T +TT LVR++
Sbjct: 220 LKYNPKTKETTTLVRNL 233

[Close]
BLAST of Lcy10g004920 vs. TAIR 10
Match: AT5G22020.1 (Calcium-dependent phosphotriesterase superfamily protein )

HSP 1 Score: 79.0 bits (193), Expect = 3.1e-15
Identity = 45/93 (48.39%), Postives = 56/93 (60.22%), Query Frame = 0 

Query: 27  GDLATSLATEAEGVPFKLTNHLDLDDKGNVYFIDSSTKHHRRNFLQVVYYYVFVENTGRV 86
           G LAT L TEAEGVP   TN LD+ D G VYF DSS  + RRNFLQ+V+     +NTGRV
Sbjct: 166 GGLATPLVTEAEGVPLGFTNDLDIADDGTVYFTDSSISYQRRNFLQLVF---SGDNTGRV 225

Query: 87  LKYNVATGQTTVLVRD--------VSKQGRFIL 112
           LKY+    +  VLV +        +S+ G F +
Sbjct: 226 LKYDPVAKKAVVLVSNLQFPNGVSISRDGSFFV 255

[Close]
BLAST of Lcy10g004920 vs. TAIR 10
Match: AT3G57030.1 (Calcium-dependent phosphotriesterase superfamily protein )

HSP 1 Score: 64.7 bits (156), Expect = 6.0e-11
Identity = 35/79 (44.30%), Postives = 53/79 (67.09%), Query Frame = 0 

Query: 27  GDLATSLATEAEGVPFKLTNHLDLDDKGNV-YFIDSSTKHHRRNFLQVVYYYVFVENTGR 86
           G LA  L TEAEG PF+ TN LD+D++ +V YF D+S +  RR FL  V   + V+ TGR
Sbjct: 144 GGLAKPLVTEAEGQPFRFTNDLDIDEQEDVIYFTDTSARFQRRQFLAAV---LNVDKTGR 203

Query: 87  VLKYNVATGQTTVLVRDVS 105
            +KY+ ++ + TVL++ ++
Sbjct: 204 FIKYDRSSKKATVLLQGLA 219

[Close]
BLAST of Lcy10g004920 vs. TAIR 10
Match: AT3G51420.1 (strictosidine synthase-like 4 )

HSP 1 Score: 49.3 bits (116), Expect = 2.6e-06
Identity = 33/107 (30.84%), Postives = 57/107 (53.27%), Query Frame = 0 

Query: 24  SSWGDLATSLATEAEGVPFKLTNHLDLDDKGNVYFIDSSTKHHRRNFLQVVYYYVFVENT 83
           S  G     L  EA+GV FKLT+ + + D G +YF D+S+K+   +F Q ++ ++  +  
Sbjct: 139 SDGGKKTELLTDEADGVRFKLTDAVTVADNGVLYFTDASSKY---DFYQFIFDFLEGKPH 198

Query: 84  GRVLKYNVATGQTTVLVRDV---------SKQGRFILC--LLRRVQR 120
           GRV+ ++  T  T VL++D+           Q  F+ C  ++RR  +
Sbjct: 199 GRVMSFDPTTRATRVLLKDLYFANGISMSPDQTHFVFCETIMRRCSK 242

[Close]
BLAST of Lcy10g004920 vs. TAIR 10
Match: AT1G74010.1 (Calcium-dependent phosphotriesterase superfamily protein )

HSP 1 Score: 44.3 bits (103), Expect = 8.4e-05
Identity = 34/94 (36.17%), Postives = 45/94 (47.87%), Query Frame = 0 

Query: 27  GDLATSLATEAEGVPFKLTNHLDLD-DKGNVYFIDSSTKHHRRNFLQVVYYYVFVENTGR 86
           G LAT LA   +G PFK  + LD+D   G VYF   S+K   R  L  V      + +G+
Sbjct: 125 GGLATKLADSVDGKPFKFLDGLDVDPTTGVVYFTSFSSKFGPREVLIAV---GLKDASGK 184

Query: 87  VLKYNVATGQTTVLVRD--------VSKQGRFIL 112
           + KY+ AT   T L+          VS  G F+L
Sbjct: 185 LFKYDPATKAVTELMEGLSGAAGCAVSSDGSFVL 215

The following BLAST results are available for this feature:
BLAST of Lcy10g004920 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8VWF63.0e-1554.55Protein STRICTOSIDINE SYNTHASE-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=SSL3 PE... [more]
Q4V3D98.4e-1044.30Protein STRICTOSIDINE SYNTHASE-LIKE 10 OS=Arabidopsis thaliana OX=3702 GN=SSL10 ... [more]
P681742.5e-0638.10Strictosidine synthase (Fragment) OS=Rauvolfia mannii OX=4062 GN=STR1 PE=3 SV=1[more]
P681752.5e-0638.10Strictosidine synthase OS=Rauvolfia serpentina OX=4060 GN=STR1 PE=1 SV=1[more]
Q9SD073.7e-0530.84Protein STRICTOSIDINE SYNTHASE-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=SSL4 PE... [more]
BLAST of Lcy10g004920 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7UXA61.4e-2367.74Protein STRICTOSIDINE SYNTHASE-LIKE 3 OS=Cucumis melo var. makuwa OX=1194695 GN=... [more]
A0A1S3BVV71.4e-2367.74protein STRICTOSIDINE SYNTHASE-LIKE 3 OS=Cucumis melo OX=3656 GN=LOC103494202 PE... [more]
A0A6J1E0U76.9e-2376.62protein STRICTOSIDINE SYNTHASE-LIKE 3-like OS=Cucurbita moschata OX=3662 GN=LOC1... [more]
A0A6J1JD631.2e-2276.62protein STRICTOSIDINE SYNTHASE-LIKE 3 OS=Cucurbita maxima OX=3661 GN=LOC11148572... [more]
A0A0A0LSY41.2e-2266.67Str_synth domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G025790 P... [more]
BLAST of Lcy10g004920 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008453519.12.9e-2367.74PREDICTED: protein STRICTOSIDINE SYNTHASE-LIKE 3 [Cucumis melo] >KAA0058159.1 pr... [more]
XP_038878317.14.9e-2367.74protein STRICTOSIDINE SYNTHASE-LIKE 3-like [Benincasa hispida][more]
XP_022921564.11.4e-2276.62protein STRICTOSIDINE SYNTHASE-LIKE 3-like [Cucurbita moschata][more]
KAG6589649.11.4e-2276.62Protein STRICTOSIDINE SYNTHASE-LIKE 3, partial [Cucurbita argyrosperma subsp. so... [more]
KAG6589647.11.9e-2276.62Protein STRICTOSIDINE SYNTHASE-LIKE 3, partial [Cucurbita argyrosperma subsp. so... [more]
BLAST of Lcy10g004920 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G08470.12.1e-1654.55strictosidine synthase-like 3 [more]
AT5G22020.13.1e-1548.39Calcium-dependent phosphotriesterase superfamily protein [more]
AT3G57030.16.0e-1144.30Calcium-dependent phosphotriesterase superfamily protein [more]
AT3G51420.12.6e-0630.84strictosidine synthase-like 4 [more]
AT1G74010.18.4e-0536.17Calcium-dependent phosphotriesterase superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018119Strictosidine synthase, conserved regionPFAMPF03088Str_synthcoord: 46..103
e-value: 1.5E-9
score: 37.9
IPR011042Six-bladed beta-propeller, TolB-likeGENE3D2.120.10.30coord: 13..105
e-value: 3.4E-22
score: 80.7
NoneNo IPR availablePANTHERPTHR10426:SF98STRICTOSIDINE SYNTHASE TRANSCRIPTION FACTOR WD40-LIKE FAMILY-RELATEDcoord: 27..104
NoneNo IPR availablePANTHERPTHR10426STRICTOSIDINE SYNTHASE-RELATEDcoord: 27..104
NoneNo IPR availableSUPERFAMILY63829Calcium-dependent phosphotriesterasecoord: 27..103

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy10g004920.1Lcy10g004920.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009058 biosynthetic process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005773 vacuole
molecular_function GO:0016844 strictosidine synthase activity