Lcy10g004870 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy10g004870
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Reverse transcriptase domain-containing protein
Location	Chr10: 12956682 .. 12959666 (+)
RNA-Seq Expression	Lcy10g004870
Synteny	Lcy10g004870

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCCACACAGCCCTAGCAAAACTGCACCTCCACAAAATATGGTCGAGGTCTTCCTCCGCCATCCGACAGGTAATGCAACAAAAAGGCCCGATCAAGCAAGGGATCTTTCTGGAGAGCCGATCAAGAGTATTAACTCTTCCATGGATAACCTGCCAGATGAAAAATTGCACCTTTTTTGGGACCTTCACCTTCCATAACATGGAAAAATGGACAACACGGTGGGAGAAGGGTTAAGCAAACAATGGAAGAAGGACCGACAAGAGAAGCCCATGGAGGGGTTGGGGTTCCACAAACGAAAATCCCTCCTTGAAGTACTGACGGTGGTCTCCTCAATCAAGGACAGGAGAGACAGAAGGTCAGTGGTATCTCTATCAGATAAAGAGCGCGTGAAGCCAAAAGAGTAGGATAGAGAGCTCCCTGAAGGGTTCAAAACCTCAGCCACATAACGATTTTTCATGAAGATAAATGATAAAGTCGAGGGAAAGTAGCGCAAAGGGGTCTCTCCCCCACCCACCTGTCCTCCTAGAAATATGTATCCTCCCCATTCCCCACAGAACAACGAATAAAAGAGGTTAGAAAAGGGAGCTCATGAGAGATTTCTTTCCACGGATTTCTAGAAGTGCCTTTGATCCCCCCATCACCCATTCAGAAGGATGAGGGTTGTATTTGCTAACAATAATCCTATGCCACAGGGTGTTGGATTCAGAGTAAAAGCGCCAAAGTCATTTTGCCAGCATTGTTACGAATTCTCAAATTACCCACCTCTAGCCCCCCTGACTTAAAGACTTCCCCACTAAATCCCAGCTCAAGAGATGCATAGATTTTCCTTCATCCACACCTATGAAGCACGGACACGCTAAAATGGAGGGAGGATCTGTGTCGGACACGGATTCGTCCGGACACGCTCCGGACACGTGTCCGACACGCAATTTTGCGAGTCCTGATTTTTTTTATTTATTTATTTTCGGACACGCTTGGACACGGCCAGATACGCCCACGGACATGCCTCGAATTATTGGTGGTATGCTGCTTAATTAAAAAATAAAAAAAATAAAAAAAAATAGAAAACGTACGTTTTTTGGAGCAGACGGCTAGGGTTTTTTTAATTTTTCAATTTTGCCTTTTGGTTTCACTCCTTCTCCACGAAATCAACCCTTCTCCACGAAATCAGCTACTCCATCTTCACGATTTCTAAAAAAAACACTACAGTAGCTTCGATTCTTCTTCTCCACGATTTCCATTGATCATTTTCTTCTCTCTGTCACCACCGGCGTCGTCACCGACCGTCTTTGCCACCGCCGCCGCTTGTTGCAAGAAGCCGCCACTATCATCGCCCTCACACAAACCACAAACCCTCACACAAACCACCGCTTGACCTTTTTTTTTCTTCCATTTAATTTCTTTCCTTTTTGTTTTTAAACCACCGATTAAGCTTCCCTAGACAAACCACAAACCCTTACACAAACAGGCCCAACCCAAGAGGTATTTTTAAATTAAAAAAAAAAAAAAAAGAAATGATGAAATTAAAAAAATTATATATATACGAAAAAAATTAAAAATTTATATATATACTAAAAATTAAAAATTTATATATATACTAAAAATTAAAAATTTATATATATACTAAAATTTTTTTAAAAATTATATATATATATATATACATACTAAAAAAATTTTAAAAAAATAGCGTATCCTCGACGTATCCGTATCTTAGTTTTTTAGAAATTTACGTATCGCTGTGTCCTGTCGTGTCCGTGTTCGTGCTTCTTAGCTTATTGCGAATGAGGCTATCGAGGACTATCGTGGGAGTGGGCGTGAGAGAGTGATCTTTAAGATTGACTTTGAGAAGGCCTATGATCATGTGGACTGGAATTTCTTGGACAAGATATTGGTTAAGAAAGGGTTTGGGTACAAGTGGAGATCTTGGATTTGGAGTTGTACGAGATCAGTTATGTATTCAATTCTCATCAACGGGAGACCAAAGGGCAGAATTCGAGCTACCCGGGACCTTTGTCAAGGGGACCCCCTATCCCCGTTTCTCTTTCTCCTGGTTGTGGATGCCCTTGGCAGAATCATTTGCAGAGGAGTGGAAGGCAAAATTCTTGAAGGTTTCGATATCGGTCAGAACAAGGTTCCTTTATCCCACCTTCAGTTTGCGGATGATACGATCTTCTTCTGTTCCGGAAAAGAGGATTCCTTCTTACTTTTGAACCACATCTTGGCCTTCTTTGAATCCATGTCTGGCCTGAAAATTAGTAGGGGTAAATGGATGCCCTTAGCAGAATCAACGGGAGACCAAAGGGCAGAATTCGAGCTACCCGGGACCTTCGTCAAGGGGACCCCCTATCCCCGTTTCTCTTTCTCCTGGTTGTGGATGCCCTTAGCAGAATCATTTGCAGAGGAGTGGAAGGCAAAATTCTTGAAGGTTTCGAGATCGGTCAGAACAAGGTTCCTTTATCCCACCTTCAGTTTGCGGATGATACGATCTTCTTCTGTTCCGGAAAAGAGGATTCCTTCTTACTTTTGAACCACATCCTGGCCTTCTTTGAATCCATGTCTGGCTTGAAAATTAATAGGAGTAAATGCCAGATTTTGAGCCTGAACTGTGAGGTTAGCAAGGCGAGGAGATGGGCTGAGCTTGTTGGTTGTGACATGAGTTCGCTCCCTTCTTCTTACTTAGGCTTGTCGTTGGGGCATAACCCGAGATCTACGTTGTTCTGGGACCCTGTGGTGGATAAGGTGAGGAAAAGACTTGCAAATTGGAAAAAGAGTTTTTTCTCCAAAGGAGGTAGGTTGACCCTCATCCGATCTGTGTTAAGTGGGATTCCTATCTATTATTTCTCCCTCTTTAGAGCCCCATGTTCGGTGTGTAAGGCTCTCGAGAAGCTTATGAGGGACTTTCTGTGGGAAGGTGTGGATCTAAGAAGCACGAACACGGACACGGGACACGGACACGAACAGACAAGACACGGCGATTCGTAA

mRNA sequence

ATGTCCCACACAGCCCTAGCAAAACTGCACCTCCACAAAATATGGTCGAGGTCTTCCTCCGCCATCCGACAGCTTATTGCGAATGAGGCTATCGAGGACTATCGTGGGAGTGGGCGTGAGAGAGTGATCTTTAAGATTGACTTTGAGAAGGCCTATGATCATGTGGACTGGAATTTCTTGGACAAGATATTGGTTAAGAAAGGGTTTGGGTACAAGTGGAGATCTTGGATTTGGAGTTGTACGAGATCAGTTATGTATTCAATTCTCATCAACGGGAGACCAAAGGGCAGAATTCGAGCTACCCGGGACCTTTGTCAAGGGGACCCCCTATCCCCGTTTCTCTTTCTCCTGGTTGTGGATGCCCTTGGCAGAATCATTTGCAGAGGAGTGGAAGGCAAAATTCTTGAAGGTTTCGATATCGGTCAGAACAAGGTTCCTTTATCCCACCTTCAGTTTGCGGATGATACGATCTTCTTCTGTTCCGGAAAAGAGGATTCCTTCTTACTTTTGAACCACATCTTGGCCTTCTTTGAATCCATGTCTGGCCTGAAAATTAGTAGGGGTAAATGGATGCCCTTAGCAGAATCAACGGGAGACCAAAGGGCAGAATTCGAGCTACCCGGGACCTTCGTCAAGGGGACCCCCTATCCCCGTTTCTCTTTCTCCTGGTTGTGGATGCCCTTAGCAGAATCATTTGCAGAGGAGTGGAAGGCAAAATTCTTGAAGGTTTCGAGATCGGTCAGAACAAGGAGTAAATGCCAGATTTTGAGCCTGAACTGTGAGGTTAGCAAGGCGAGGAGATGGGCTGAGCTTGTTGGTTGTGACATGAGTTCGCTCCCTTCTTCTTACTTAGGCTTGTCGTTGGGGCATAACCCGAGATCTACGTTGTTCTGGGACCCTGTGGTGGATAAGGTGAGGAAAAGACTTGCAAATTGGAAAAAGAGTTTTTTCTCCAAAGGAGGTAGGTTGACCCTCATCCGATCTGTGTTAAGTGGGATTCCTATCTATTATTTCTCCCTCTTTAGAGCCCCATGTTCGGTGTGTAAGGCTCTCGAGAAGCTTATGAGGGACTTTCTGTGGGAAGGTGTGGATCTAAGAAGCACGAACACGGACACGGGACACGGACACGAACAGACAAGACACGGCGATTCGTAA

Coding sequence (CDS)

ATGTCCCACACAGCCCTAGCAAAACTGCACCTCCACAAAATATGGTCGAGGTCTTCCTCCGCCATCCGACAGCTTATTGCGAATGAGGCTATCGAGGACTATCGTGGGAGTGGGCGTGAGAGAGTGATCTTTAAGATTGACTTTGAGAAGGCCTATGATCATGTGGACTGGAATTTCTTGGACAAGATATTGGTTAAGAAAGGGTTTGGGTACAAGTGGAGATCTTGGATTTGGAGTTGTACGAGATCAGTTATGTATTCAATTCTCATCAACGGGAGACCAAAGGGCAGAATTCGAGCTACCCGGGACCTTTGTCAAGGGGACCCCCTATCCCCGTTTCTCTTTCTCCTGGTTGTGGATGCCCTTGGCAGAATCATTTGCAGAGGAGTGGAAGGCAAAATTCTTGAAGGTTTCGATATCGGTCAGAACAAGGTTCCTTTATCCCACCTTCAGTTTGCGGATGATACGATCTTCTTCTGTTCCGGAAAAGAGGATTCCTTCTTACTTTTGAACCACATCTTGGCCTTCTTTGAATCCATGTCTGGCCTGAAAATTAGTAGGGGTAAATGGATGCCCTTAGCAGAATCAACGGGAGACCAAAGGGCAGAATTCGAGCTACCCGGGACCTTCGTCAAGGGGACCCCCTATCCCCGTTTCTCTTTCTCCTGGTTGTGGATGCCCTTAGCAGAATCATTTGCAGAGGAGTGGAAGGCAAAATTCTTGAAGGTTTCGAGATCGGTCAGAACAAGGAGTAAATGCCAGATTTTGAGCCTGAACTGTGAGGTTAGCAAGGCGAGGAGATGGGCTGAGCTTGTTGGTTGTGACATGAGTTCGCTCCCTTCTTCTTACTTAGGCTTGTCGTTGGGGCATAACCCGAGATCTACGTTGTTCTGGGACCCTGTGGTGGATAAGGTGAGGAAAAGACTTGCAAATTGGAAAAAGAGTTTTTTCTCCAAAGGAGGTAGGTTGACCCTCATCCGATCTGTGTTAAGTGGGATTCCTATCTATTATTTCTCCCTCTTTAGAGCCCCATGTTCGGTGTGTAAGGCTCTCGAGAAGCTTATGAGGGACTTTCTGTGGGAAGGTGTGGATCTAAGAAGCACGAACACGGACACGGGACACGGACACGAACAGACAAGACACGGCGATTCGTAA

Protein sequence

MSHTALAKLHLHKIWSRSSSAIRQLIANEAIEDYRGSGRERVIFKIDFEKAYDHVDWNFLDKILVKKGFGYKWRSWIWSCTRSVMYSILINGRPKGRIRATRDLCQGDPLSPFLFLLVVDALGRIICRGVEGKILEGFDIGQNKVPLSHLQFADDTIFFCSGKEDSFLLLNHILAFFESMSGLKISRGKWMPLAESTGDQRAEFELPGTFVKGTPYPRFSFSWLWMPLAESFAEEWKAKFLKVSRSVRTRSKCQILSLNCEVSKARRWAELVGCDMSSLPSSYLGLSLGHNPRSTLFWDPVVDKVRKRLANWKKSFFSKGGRLTLIRSVLSGIPIYYFSLFRAPCSVCKALEKLMRDFLWEGVDLRSTNTDTGHGHEQTRHGDS

Homology

[Close]

BLAST of Lcy10g004870 vs. ExPASy Swiss-Prot
Match: P11369 (LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE=1 SV=2)

HSP 1 Score: 73.9 bits (180), Expect = 4.3e-12
Identity = 57/212 (26.89%), Postives = 104/212 (49.06%), Query Frame = 0


Query: 39  RERVIFKIDFEKAYDHVDWNFLDKILVKKGFGYKWRSWIWSCTRSVMYSILINGRPKGRI 98
           +  +I  +D EKA+D +   F+ K+L + G    + + I +     + +I +NG     I
Sbjct: 599 KNHMIISLDAEKAFDKIQHPFMIKVLERSGIQGPYLNMIKAIYSKPVANIKVNGEKLEAI 658

Query: 99  RATRDLCQGDPLSPFLFLLVVDALGRIICRGVEGKILEGFDIGQNKVPLSHLQFADDTIF 158
                  QG PLSP+LF +V++ L R I    + K ++G  IG+ +V +S L  ADD I 
Sbjct: 659 PLKSGTRQGCPLSPYLFNIVLEVLARAI---RQQKEIKGIQIGKEEVKISLL--ADDMIV 718

Query: 159 FCSGKEDSFLLLNHILAFFESMSGLKISRGKWMPLAESTGDQRAEFELPGTFVKGTPYP- 218
           + S  ++S   L +++  F  + G KI+  K M     T +++AE E+  T    TP+  
Sbjct: 719 YISDPKNSTRELLNLINSFGEVVGYKINSNKSMAFL-YTKNKQAEKEIRET----TPFSI 778

Query: 219 -RFSFSWLWMPLAESFAEEWKAKFLKVSRSVR 249
              +  +L + L +   + +   F  + + ++
Sbjct: 779 VTNNIKYLGVTLTKEVKDLYDKNFKSLKKEIK 800

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BLAST of Lcy10g004870 vs. ExPASy Swiss-Prot
Match: P08548 (LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 8.1e-11
Identity = 47/162 (29.01%), Postives = 77/162 (47.53%), Query Frame = 0


Query: 39  RERVIFKIDFEKAYDHVDWNFLDKILVKKGFGYKWRSWIWSCTRSVMYSILINGRPKGRI 98
           ++ +I  ID EKA+D++   F+ + L K G    +   I +       +I++NG      
Sbjct: 591 KDHMILSIDAEKAFDNIQHPFMIRTLKKIGIEGTFLKLIEAIYSKPTANIILNGVKLKSF 650

Query: 99  RATRDLCQGDPLSPFLFLLVVDALGRIICRGVEGKILEGFDIGQNKVPLSHLQFADDTIF 158
                  QG PLSP LF +V++ L   I    E K ++G  IG  ++ LS   FADD I 
Sbjct: 651 PLRSGTRQGCPLSPLLFNIVMEVLAIAI---REEKAIKGIHIGSEEIKLS--LFADDMIV 710

Query: 159 FCSGKEDSFLLLNHILAFFESMSGLKISRGKWMPLAESTGDQ 201
           +     DS   L  ++  + ++SG KI+  K +    +  +Q
Sbjct: 711 YLENTRDSTTKLLEVIKEYSNVSGYKINTHKSVAFIYTNNNQ 747

[Close]

BLAST of Lcy10g004870 vs. ExPASy Swiss-Prot
Match: O00370 (LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.8e-10
Identity = 48/152 (31.58%), Postives = 73/152 (48.03%), Query Frame = 0


Query: 35  RGSGRERVIFKIDFEKAYDHVDWNFLDKILVKKGFGYKWRSWIWSCTRSVMYSILINGRP 94
           R   +  VI  ID EKA+D +   F+ K L K G    +   I +       +I++NG+ 
Sbjct: 588 RAKDKNHVIISIDAEKAFDKIQQPFMLKTLNKLGIDGMYLKIIRAIYDKPTANIILNGQK 647

Query: 95  KGRIRATRDLCQGDPLSPFLFLLVVDALGRIICRGVEGKILEGFDIGQNKVPLSHLQFAD 154
                      QG PLSP LF +V++ L R I    + K ++G  +G+ +V LS   FAD
Sbjct: 648 LEAFPLKTGTRQGCPLSPLLFNIVLEVLARAI---RQEKEIKGIQLGKEEVKLS--LFAD 707

Query: 155 DTIFFCSGKEDSFLLLNHILAFFESMSGLKIS 187
           D I +      S   L  +++ F  +SG KI+
Sbjct: 708 DMIVYLENPIVSAQNLLKLISNFSKVSGYKIN 734

[Close]

BLAST of Lcy10g004870 vs. ExPASy Swiss-Prot
Match: P92555 (Uncharacterized mitochondrial protein AtMg01250 OS=Arabidopsis thaliana OX=3702 GN=AtMg01250 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 9.0e-10
Identity = 30/68 (44.12%), Postives = 41/68 (60.29%), Query Frame = 0


Query: 89  LINGRPKGRIRATRDLCQGDPLSPFLFLLVVDALGRIICRGVEGKILEGFDIGQNKVPLS 148
           +ING P+G +  +R L QGDPLSP+LF+L  + L  +  R  E   L G  +  N   ++
Sbjct: 13  IINGAPQGLVTPSRGLRQGDPLSPYLFILCTEVLSGLCRRAQEQGRLPGIRVSNNSPRIN 72

Query: 149 HLQFADDT 157
           HL FADDT
Sbjct: 73  HLLFADDT 80

[Close]

BLAST of Lcy10g004870 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 2.7e-06
Identity = 22/60 (36.67%), Postives = 38/60 (63.33%), Query Frame = 0


Query: 301 VVDKVRKRLANWKKSFFSKGGRLTLIRSVLSGIPIYYFSLFRAPCSVCKALEKLMRDFLW 360
           ++++V  R++ W++   S  GRLTL ++VLS +P++  S    P S+   L++L R FLW
Sbjct: 16  ILERVSSRMSGWREKTLSFAGRLTLTKAVLSSMPVHSMSTILLPQSILNRLDQLSRTFLW 75

[Close]

BLAST of Lcy10g004870 vs. ExPASy TrEMBL
Match: A0A5H2XQW2 (TatD related DNase OS=Prunus dulcis OX=3755 GN=Prudu_862S001100 PE=4 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 6.3e-75
Identity = 149/340 (43.82%), Postives = 196/340 (57.65%), Query Frame = 0


Query: 25  LIANEAIEDYRGSGRERVIFKIDFEKAYDHVDWNFLDKILVKKGFGYKWRSWIWSCTRSV 84
           L+ANE +E+ R   R+ ++FKIDFEKAYDHV+W F+D ++ +KGFG KWR WI+ C  S 
Sbjct: 314 LVANEVVEEVRKQNRKGLVFKIDFEKAYDHVEWKFVDDVMARKGFGVKWRGWIFGCLESA 373

Query: 85  MYSILINGRPKGRIRATRDLCQGDPLSPFLFLLVVDALGRIICRGVEGKILEGFDIGQNK 144
            +SI+ING+P+G+ RA+R L QGDPLSPFLF LV D L RII R  +  ++ G   G ++
Sbjct: 374 NFSIMINGKPRGKFRASRGLRQGDPLSPFLFTLVSDVLSRIIERAQDVNLVHGIVSGHDQ 433

Query: 145 VPLSHLQFADDTIFFCSGKEDSFLLLNHILAFFESMSGLKISRGKWMPLAESTGDQRAEF 204
           V +SHLQFADDTIFF  GKE+ +L L  +L  F  +SG+KI++ K               
Sbjct: 434 VEVSHLQFADDTIFFLDGKEEYWLNLLQMLKLFCDVSGMKINKAK--------------- 493

Query: 205 ELPGTFVKGTPYPRFSFSWLWMPLAESFAEEWKAKFLKVSRSVRTRSKCQILSLNCEVSK 264
                                                           C IL +N  +  
Sbjct: 494 -----------------------------------------------SC-ILGINFSIET 553

Query: 265 ARRWAELVGCDMSSLPSSYLGLSLGHNPRSTLFWDPVVDKVRKRLANWKKSFFSKGGRLT 324
               A   GC++   P  YLGL LG NPR+  FW+PV+DKV KRL  WK++  SKGGRLT
Sbjct: 554 LNNMAGSWGCEVGCWPMVYLGLPLGGNPRALNFWNPVLDKVEKRLQRWKRACLSKGGRLT 590

Query: 325 LIRSVLSGIPIYYFSLFRAPCSVCKALEKLMRDFLWEGVD 365
           LI++VLS IP YY SLF+ P  V   +E+LMR+FLWEGV+
Sbjct: 614 LIQAVLSSIPSYYMSLFKMPIGVTAKVEQLMRNFLWEGVE 590

[Close]

BLAST of Lcy10g004870 vs. ExPASy TrEMBL
Match: M5XHS0 (Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa020085mg PE=4 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 8.3e-75
Identity = 151/340 (44.41%), Postives = 196/340 (57.65%), Query Frame = 0


Query: 25  LIANEAIEDYRGSGRERVIFKIDFEKAYDHVDWNFLDKILVKKGFGYKWRSWIWSCTRSV 84
           L+ANE +E+ R   R+ ++FKIDFEKAYDHV+WNF+D +LV+KGFG KWR WI  C  SV
Sbjct: 537 LVANEVVEEVRKQKRKGLVFKIDFEKAYDHVEWNFVDDVLVRKGFGAKWRGWIIGCLESV 596

Query: 85  MYSILINGRPKGRIRATRDLCQGDPLSPFLFLLVVDALGRIICRGVEGKILEGFDIGQNK 144
            +SI+ING+P+G+ RA+R L QGDPLSPFLF LV D L RII R  +  ++ G   G ++
Sbjct: 597 NFSIMINGKPRGKFRASRGLRQGDPLSPFLFTLVSDVLSRIIERAQDVNLVHGIVSGHDQ 656

Query: 145 VPLSHLQFADDTIFFCSGKEDSFLLLNHILAFFESMSGLKISRGKWMPLAESTGDQRAEF 204
           V +SHLQFADDTIF   GKE+ +L L  +L  F  +SG+KI++ K               
Sbjct: 657 VEVSHLQFADDTIFLLDGKEEYWLNLLQLLKLFCEVSGMKINKAK--------------- 716

Query: 205 ELPGTFVKGTPYPRFSFSWLWMPLAESFAEEWKAKFLKVSRSVRTRSKCQILSLNCEVSK 264
                                                           C IL +N     
Sbjct: 717 -----------------------------------------------SC-ILGINFSTDA 776

Query: 265 ARRWAELVGCDMSSLPSSYLGLSLGHNPRSTLFWDPVVDKVRKRLANWKKSFFSKGGRLT 324
               A   GC++   P  YLGL LG NPR+  FW+PV+DKV KRL  WK++  SKGGRLT
Sbjct: 777 LNNMAGSWGCEVGCWPMVYLGLPLGGNPRALNFWNPVMDKVEKRLQKWKRACLSKGGRLT 813

Query: 325 LIRSVLSGIPIYYFSLFRAPCSVCKALEKLMRDFLWEGVD 365
           LI++VLS IP YY SLF+ P  V   +E+LMR+FLWEG++
Sbjct: 837 LIQAVLSSIPSYYMSLFKMPIGVAAKVEQLMRNFLWEGLE 813

[Close]

BLAST of Lcy10g004870 vs. ExPASy TrEMBL
Match: A0A803P8A0 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 1.1e-74
Identity = 150/341 (43.99%), Postives = 192/341 (56.30%), Query Frame = 0


Query: 25  LIANEAIEDYRGSGRERVIFKIDFEKAYDHVDWNFLDKILVKKGFGYKWRSWIWSCTRSV 84
           L+ANEA+EDYR  G++  + KIDFEKAYD VDW FLD +L KKGFG +WR WI  C  S 
Sbjct: 559 LLANEAVEDYRSRGKKGFVLKIDFEKAYDRVDWGFLDLVLRKKGFGERWRKWIRGCVSST 618

Query: 85  MYSILINGRPKGRIRATRDLCQGDPLSPFLFLLVVDALGRIICRGVEGKILEGFDIGQNK 144
            +SI +NGR +G+   +R L QGDPLSPFLF LV D LGR++ + VE +   GF IG++ 
Sbjct: 619 SFSIFVNGRVRGKFHGSRGLRQGDPLSPFLFTLVADVLGRMVDKAVETEAFSGFQIGKDN 678

Query: 145 VPLSHLQFADDTIFFCSGKEDSFLLLNHILAFFESMSGLKISRGKWMPLAESTGDQRAEF 204
           + LSHLQFADDT+FF    EDS   L  I+  F  +SGLK++                  
Sbjct: 679 IRLSHLQFADDTLFFVK-DEDSLQKLVKIVEAFCGISGLKVN------------------ 738

Query: 205 ELPGTFVKGTPYPRFSFSWLWMPLAESFAEEWKAKFLKVSRSVRTRSKCQILSLNCEVSK 264
                                                         +K Q+L +      
Sbjct: 739 ---------------------------------------------LNKSQLLGICLSDEA 798

Query: 265 ARRWAELVGCDMSSLPSSYLGLSLGHNPRSTLFWDPVVDKVRKRLANWKKSFFSKGGRLT 324
             + A L+GC++   P +YLG+ LG +PR   FW+PV+DK  KR+  WK SF S+GGRLT
Sbjct: 799 VAQGANLIGCEVGKWPMTYLGMPLGGSPRKKTFWEPVLDKCAKRMDGWKCSFLSRGGRLT 835

Query: 325 LIRSVLSGIPIYYFSLFRAPCSVCKALEKLMRDFLWEGVDL 366
           LI+SVLS +PIYY SLF+ P  V K LEK+MRDF WEG DL
Sbjct: 859 LIQSVLSSLPIYYLSLFKVPKMVLKELEKMMRDFFWEGGDL 835

[Close]

BLAST of Lcy10g004870 vs. ExPASy TrEMBL
Match: A0A5E4F090 (Reverse transcriptase domain-containing protein (Fragment) OS=Prunus dulcis OX=3755 GN=ALMOND_2B035017 PE=4 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 1.4e-74
Identity = 150/340 (44.12%), Postives = 196/340 (57.65%), Query Frame = 0


Query: 25  LIANEAIEDYRGSGRERVIFKIDFEKAYDHVDWNFLDKILVKKGFGYKWRSWIWSCTRSV 84
           L+ANE +E+ R   R+ ++FKIDFEKAYDHV+WNF+D +L +KGFG KWR WI+ C  S 
Sbjct: 535 LVANEVVEEVRKQNRKGLVFKIDFEKAYDHVEWNFVDDVLARKGFGVKWRGWIFGCLESA 594

Query: 85  MYSILINGRPKGRIRATRDLCQGDPLSPFLFLLVVDALGRIICRGVEGKILEGFDIGQNK 144
            +SI+ING+P+G+ RA+R L QGDPLSPFLF LV D L RII R  +  ++ G   G ++
Sbjct: 595 NFSIMINGKPRGKFRASRGLRQGDPLSPFLFTLVSDVLSRIIERAQDVNLVHGIVSGHDQ 654

Query: 145 VPLSHLQFADDTIFFCSGKEDSFLLLNHILAFFESMSGLKISRGKWMPLAESTGDQRAEF 204
           V +S LQFADDTIFF  GKE+ +L L  +L  F  +SG+KI++ K               
Sbjct: 655 VEVSPLQFADDTIFFLDGKEEYWLNLLQMLKLFCDVSGMKINKAK--------------- 714

Query: 205 ELPGTFVKGTPYPRFSFSWLWMPLAESFAEEWKAKFLKVSRSVRTRSKCQILSLNCEVSK 264
                                                           C IL +N  +  
Sbjct: 715 -----------------------------------------------SC-ILGINFSIEA 774

Query: 265 ARRWAELVGCDMSSLPSSYLGLSLGHNPRSTLFWDPVVDKVRKRLANWKKSFFSKGGRLT 324
               A   GC++   P  YLGL LG NPR+  FW+PV+DKV KRL  WK++  SKGGRLT
Sbjct: 775 LNNMAGSWGCEVGCWPMVYLGLPLGGNPRALNFWNPVLDKVEKRLQKWKRACLSKGGRLT 811

Query: 325 LIRSVLSGIPIYYFSLFRAPCSVCKALEKLMRDFLWEGVD 365
           LI++VLS IP YY SLF+ P  V   +E+LMR+FLWEGV+
Sbjct: 835 LIQAVLSSIPSYYMSLFKMPIGVTVKVEQLMRNFLWEGVE 811

[Close]

BLAST of Lcy10g004870 vs. ExPASy TrEMBL
Match: M5VS59 (Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa016504mg PE=4 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 1.8e-74
Identity = 150/340 (44.12%), Postives = 195/340 (57.35%), Query Frame = 0


Query: 25  LIANEAIEDYRGSGRERVIFKIDFEKAYDHVDWNFLDKILVKKGFGYKWRSWIWSCTRSV 84
           L+ANE +E+ R   R+ ++FKIDFEKAYDHV+WNF+D +L +KGFG KWR WI  C  SV
Sbjct: 545 LVANEVVEEVRKQKRKGLVFKIDFEKAYDHVEWNFVDDVLARKGFGVKWRGWIIGCLESV 604

Query: 85  MYSILINGRPKGRIRATRDLCQGDPLSPFLFLLVVDALGRIICRGVEGKILEGFDIGQNK 144
            +SI+ING+P+G+ RA+R L QGDPLSPFLF LV D L RII R  +  ++ G   G ++
Sbjct: 605 NFSIMINGKPRGKFRASRGLRQGDPLSPFLFTLVSDVLSRIIERAQDVNLVHGIVSGHDQ 664

Query: 145 VPLSHLQFADDTIFFCSGKEDSFLLLNHILAFFESMSGLKISRGKWMPLAESTGDQRAEF 204
           V +SHLQFADDTIF   GKE+ +L L  +L  F  +SG+KI++ K               
Sbjct: 665 VEVSHLQFADDTIFLLDGKEEYWLNLLQLLKLFCDVSGMKINKAK--------------- 724

Query: 205 ELPGTFVKGTPYPRFSFSWLWMPLAESFAEEWKAKFLKVSRSVRTRSKCQILSLNCEVSK 264
                                                           C IL +N     
Sbjct: 725 -----------------------------------------------SC-ILGINFSTEA 784

Query: 265 ARRWAELVGCDMSSLPSSYLGLSLGHNPRSTLFWDPVVDKVRKRLANWKKSFFSKGGRLT 324
               A   GC++   P  YLGL LG NPR+  FW+PV+DKV KRL  WK++  SKGGRLT
Sbjct: 785 LNNMAGSWGCEVGCWPMVYLGLPLGGNPRALNFWNPVMDKVEKRLQKWKRACLSKGGRLT 821

Query: 325 LIRSVLSGIPIYYFSLFRAPCSVCKALEKLMRDFLWEGVD 365
           LI++VLS IP YY SLF+ P  V   +E+LMR+FLWEG++
Sbjct: 845 LIQAVLSSIPSYYMSLFKMPIGVAAKVEQLMRNFLWEGLE 821

[Close]

BLAST of Lcy10g004870 vs. NCBI nr
Match: XP_009335445.1 (PREDICTED: uncharacterized protein LOC103928158 [Pyrus x bretschneideri])

HSP 1 Score: 305.1 bits (780), Expect = 8.8e-79
Identity = 154/340 (45.29%), Postives = 201/340 (59.12%), Query Frame = 0


Query: 25  LIANEAIEDYRGSGRERVIFKIDFEKAYDHVDWNFLDKILVKKGFGYKWRSWIWSCTRSV 84
           LIANE +E+ R    E ++FKIDFEKAYDHV+W FLD+IL +KGFG +WR W+  C  S 
Sbjct: 379 LIANELVEEVRQKKEEGLMFKIDFEKAYDHVEWRFLDEILQRKGFGNRWRKWVQGCQNSA 438

Query: 85  MYSILINGRPKGRIRATRDLCQGDPLSPFLFLLVVDALGRIICRGVEGKILEGFDIGQNK 144
            +SILINGRPKG+  A+R L QGDPLSPFLF LVVD L R++ +  E  +++G  IGQ +
Sbjct: 439 NFSILINGRPKGKFHASRRLRQGDPLSPFLFTLVVDVLSRLMEKAHENHLIKGLGIGQER 498

Query: 145 VPLSHLQFADDTIFFCSGKEDSFLLLNHILAFFESMSGLKISRGKWMPLAESTGDQRAEF 204
           V +SHLQFADDTIFF +  ED +  L  +L  F ++SGLKI+                  
Sbjct: 499 VEISHLQFADDTIFFLAEDEDVWNNLLEVLNLFCTISGLKIN------------------ 558

Query: 205 ELPGTFVKGTPYPRFSFSWLWMPLAESFAEEWKAKFLKVSRSVRTRSKCQILSLNCEVSK 264
                                                        ++KC +  +N +  K
Sbjct: 559 ---------------------------------------------KAKCSMAGINSDCEK 618

Query: 265 ARRWAELVGCDMSSLPSSYLGLSLGHNPRSTLFWDPVVDKVRKRLANWKKSFFSKGGRLT 324
            +  A+  GC++ S P  YLGL LG  P++ +FWDPVV+K+ KRL +WKK+F SKGGRLT
Sbjct: 619 LKGMADSWGCEVGSWPIKYLGLPLGGRPKALMFWDPVVEKMEKRLQSWKKAFLSKGGRLT 655

Query: 325 LIRSVLSGIPIYYFSLFRAPCSVCKALEKLMRDFLWEGVD 365
           LI+ VL  +PIYY SLF+ PC V   LEKLM+ FLWEGV+
Sbjct: 679 LIQFVLGSLPIYYMSLFKIPCGVIGRLEKLMKGFLWEGVE 655

[Close]

BLAST of Lcy10g004870 vs. NCBI nr
Match: BBN69274.1 (TatD related DNase [Prunus dulcis])

HSP 1 Score: 291.2 bits (744), Expect = 1.3e-74
Identity = 149/340 (43.82%), Postives = 196/340 (57.65%), Query Frame = 0


Query: 25  LIANEAIEDYRGSGRERVIFKIDFEKAYDHVDWNFLDKILVKKGFGYKWRSWIWSCTRSV 84
           L+ANE +E+ R   R+ ++FKIDFEKAYDHV+W F+D ++ +KGFG KWR WI+ C  S 
Sbjct: 314 LVANEVVEEVRKQNRKGLVFKIDFEKAYDHVEWKFVDDVMARKGFGVKWRGWIFGCLESA 373

Query: 85  MYSILINGRPKGRIRATRDLCQGDPLSPFLFLLVVDALGRIICRGVEGKILEGFDIGQNK 144
            +SI+ING+P+G+ RA+R L QGDPLSPFLF LV D L RII R  +  ++ G   G ++
Sbjct: 374 NFSIMINGKPRGKFRASRGLRQGDPLSPFLFTLVSDVLSRIIERAQDVNLVHGIVSGHDQ 433

Query: 145 VPLSHLQFADDTIFFCSGKEDSFLLLNHILAFFESMSGLKISRGKWMPLAESTGDQRAEF 204
           V +SHLQFADDTIFF  GKE+ +L L  +L  F  +SG+KI++ K               
Sbjct: 434 VEVSHLQFADDTIFFLDGKEEYWLNLLQMLKLFCDVSGMKINKAK--------------- 493

Query: 205 ELPGTFVKGTPYPRFSFSWLWMPLAESFAEEWKAKFLKVSRSVRTRSKCQILSLNCEVSK 264
                                                           C IL +N  +  
Sbjct: 494 -----------------------------------------------SC-ILGINFSIET 553

Query: 265 ARRWAELVGCDMSSLPSSYLGLSLGHNPRSTLFWDPVVDKVRKRLANWKKSFFSKGGRLT 324
               A   GC++   P  YLGL LG NPR+  FW+PV+DKV KRL  WK++  SKGGRLT
Sbjct: 554 LNNMAGSWGCEVGCWPMVYLGLPLGGNPRALNFWNPVLDKVEKRLQRWKRACLSKGGRLT 590

Query: 325 LIRSVLSGIPIYYFSLFRAPCSVCKALEKLMRDFLWEGVD 365
           LI++VLS IP YY SLF+ P  V   +E+LMR+FLWEGV+
Sbjct: 614 LIQAVLSSIPSYYMSLFKMPIGVTAKVEQLMRNFLWEGVE 590

[Close]

BLAST of Lcy10g004870 vs. NCBI nr
Match: VVA20479.1 (Hypothetical predicted protein, partial [Prunus dulcis])

HSP 1 Score: 290.0 bits (741), Expect = 2.9e-74
Identity = 150/340 (44.12%), Postives = 196/340 (57.65%), Query Frame = 0


Query: 25  LIANEAIEDYRGSGRERVIFKIDFEKAYDHVDWNFLDKILVKKGFGYKWRSWIWSCTRSV 84
           L+ANE +E+ R   R+ ++FKIDFEKAYDHV+WNF+D +L +KGFG KWR WI+ C  S 
Sbjct: 535 LVANEVVEEVRKQNRKGLVFKIDFEKAYDHVEWNFVDDVLARKGFGVKWRGWIFGCLESA 594

Query: 85  MYSILINGRPKGRIRATRDLCQGDPLSPFLFLLVVDALGRIICRGVEGKILEGFDIGQNK 144
            +SI+ING+P+G+ RA+R L QGDPLSPFLF LV D L RII R  +  ++ G   G ++
Sbjct: 595 NFSIMINGKPRGKFRASRGLRQGDPLSPFLFTLVSDVLSRIIERAQDVNLVHGIVSGHDQ 654

Query: 145 VPLSHLQFADDTIFFCSGKEDSFLLLNHILAFFESMSGLKISRGKWMPLAESTGDQRAEF 204
           V +S LQFADDTIFF  GKE+ +L L  +L  F  +SG+KI++ K               
Sbjct: 655 VEVSPLQFADDTIFFLDGKEEYWLNLLQMLKLFCDVSGMKINKAK--------------- 714

Query: 205 ELPGTFVKGTPYPRFSFSWLWMPLAESFAEEWKAKFLKVSRSVRTRSKCQILSLNCEVSK 264
                                                           C IL +N  +  
Sbjct: 715 -----------------------------------------------SC-ILGINFSIEA 774

Query: 265 ARRWAELVGCDMSSLPSSYLGLSLGHNPRSTLFWDPVVDKVRKRLANWKKSFFSKGGRLT 324
               A   GC++   P  YLGL LG NPR+  FW+PV+DKV KRL  WK++  SKGGRLT
Sbjct: 775 LNNMAGSWGCEVGCWPMVYLGLPLGGNPRALNFWNPVLDKVEKRLQKWKRACLSKGGRLT 811

Query: 325 LIRSVLSGIPIYYFSLFRAPCSVCKALEKLMRDFLWEGVD 365
           LI++VLS IP YY SLF+ P  V   +E+LMR+FLWEGV+
Sbjct: 835 LIQAVLSSIPSYYMSLFKMPIGVTVKVEQLMRNFLWEGVE 811

[Close]

BLAST of Lcy10g004870 vs. NCBI nr
Match: BBN69746.1 (VIRB2-interacting protein 2 [Prunus dulcis])

HSP 1 Score: 288.1 bits (736), Expect = 1.1e-73
Identity = 147/345 (42.61%), Postives = 193/345 (55.94%), Query Frame = 0


Query: 25  LIANEAIEDYRGSGRERVIFKIDFEKAYDHVDWNFLDKILVKKGFGYKWRSWIWSCTRSV 84
           LIANE +E+ R   +  ++FKID EKAYDHV+W F+D++L++KGFG +WRSWI  C  + 
Sbjct: 314 LIANEVVEESRRLNKSGMVFKIDLEKAYDHVEWRFVDEVLIRKGFGDRWRSWIRGCLETA 373

Query: 85  MYSILINGRPKGRIRATRDLCQGDPLSPFLFLLVVDALGRIICRGVEGKILEGFDIGQNK 144
            +S++INGRP+G+ RA+R L QGDPLSPFLF LV+D L RI+ +  +     G   G   
Sbjct: 374 NFSVMINGRPRGKFRASRGLRQGDPLSPFLFTLVMDVLSRIMEKAQDADEFHGLSPGNGM 433

Query: 145 VPLSHLQFADDTIFFCSGKEDSFLLLNHILAFFESMSGLKISRGKWMPLAESTGDQRAEF 204
           V +SHLQFADDTIFF   KE+ +  L  IL  F  +SG+ I+                  
Sbjct: 434 VEISHLQFADDTIFFIEDKEEYWNNLLQILELFCFVSGMTIN------------------ 493

Query: 205 ELPGTFVKGTPYPRFSFSWLWMPLAESFAEEWKAKFLKVSRSVRTRSKCQILSLNCEVSK 264
                                                        +SKC ++ +N +   
Sbjct: 494 ---------------------------------------------KSKCSLVGINLDDGM 553

Query: 265 ARRWAELVGCDMSSLPSSYLGLSLGHNPRSTLFWDPVVDKVRKRLANWKKSFFSKGGRLT 324
               A   GCD+   P  YLGL LG NPR+  FWDPVV+KV  RL  WK++  SKGGRLT
Sbjct: 554 VNEMAGAWGCDVGVWPMLYLGLPLGGNPRAIKFWDPVVEKVENRLQKWKRACLSKGGRLT 595

Query: 325 LIRSVLSGIPIYYFSLFRAPCSVCKALEKLMRDFLWEGVDLRSTN 370
           +I++VL  IPIYY SLFR P  V   +EKLMRDFLWEG+D +S +
Sbjct: 614 MIQAVLCSIPIYYMSLFRIPIGVANRIEKLMRDFLWEGLDGKSNH 595

[Close]

BLAST of Lcy10g004870 vs. NCBI nr
Match: VVA21938.1 (Hypothetical predicted protein, partial [Prunus dulcis])

HSP 1 Score: 288.1 bits (736), Expect = 1.1e-73
Identity = 147/345 (42.61%), Postives = 193/345 (55.94%), Query Frame = 0


Query: 25  LIANEAIEDYRGSGRERVIFKIDFEKAYDHVDWNFLDKILVKKGFGYKWRSWIWSCTRSV 84
           LIANE +E+ R   +  ++FKID EKAYDHV+W F+D++L++KGFG +WRSWI  C  + 
Sbjct: 494 LIANEVVEESRRLNKSGMVFKIDLEKAYDHVEWRFVDEVLIRKGFGDRWRSWIRGCLETA 553

Query: 85  MYSILINGRPKGRIRATRDLCQGDPLSPFLFLLVVDALGRIICRGVEGKILEGFDIGQNK 144
            +S++INGRP+G+ RA+R L QGDPLSPFLF LV+D L RI+ +  +     G   G   
Sbjct: 554 NFSVMINGRPRGKFRASRGLRQGDPLSPFLFTLVMDVLSRIMEKAQDADEFHGLSPGNGM 613

Query: 145 VPLSHLQFADDTIFFCSGKEDSFLLLNHILAFFESMSGLKISRGKWMPLAESTGDQRAEF 204
           V +SHLQFADDTIFF   KE+ +  L  IL  F  +SG+ I+                  
Sbjct: 614 VEISHLQFADDTIFFIEDKEEYWNNLLQILELFCFVSGMTIN------------------ 673

Query: 205 ELPGTFVKGTPYPRFSFSWLWMPLAESFAEEWKAKFLKVSRSVRTRSKCQILSLNCEVSK 264
                                                        +SKC ++ +N +   
Sbjct: 674 ---------------------------------------------KSKCSLVGINLDDGM 733

Query: 265 ARRWAELVGCDMSSLPSSYLGLSLGHNPRSTLFWDPVVDKVRKRLANWKKSFFSKGGRLT 324
               A   GCD+   P  YLGL LG NPR+  FWDPVV+KV  RL  WK++  SKGGRLT
Sbjct: 734 VNEMAGAWGCDVGVWPMLYLGLPLGGNPRAIKFWDPVVEKVENRLQKWKRACLSKGGRLT 775

Query: 325 LIRSVLSGIPIYYFSLFRAPCSVCKALEKLMRDFLWEGVDLRSTN 370
           +I++VL  IPIYY SLFR P  V   +EKLMRDFLWEG+D +S +
Sbjct: 794 MIQAVLCSIPIYYMSLFRIPIGVANRIEKLMRDFLWEGLDGKSNH 775

[Close]

BLAST of Lcy10g004870 vs. TAIR 10
Match: AT3G24255.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 68.9 bits (167), Expect = 9.8e-12
Identity = 32/90 (35.56%), Postives = 49/90 (54.44%), Query Frame = 0


Query: 278 SLPSSYLGLSLGHNPRSTLFWDPVVDKVRKRLANWKKSFFSKGGRLTLIRSVLSGIPIYY 337
           +LP  YLGL L     +T  + P+V+K+R R+  W     S  GRL LI SV+  +  ++
Sbjct: 22  ALPVRYLGLPLLTKKMTTSDYGPLVEKIRVRIGKWTARHLSFAGRLQLISSVIHSLTNFW 81

Query: 338 FSLFRAPCSVCKALEKLMRDFLWEGVDLRS 368
            S FR P +  K ++ +   FLW G +L +
Sbjct: 82  MSAFRLPSACIKEIDSICSSFLWSGPELNT 111

[Close]

BLAST of Lcy10g004870 vs. TAIR 10
Match: ATMG01250.1 (RNA-directed DNA polymerase (reverse transcriptase) )

HSP 1 Score: 66.2 bits (160), Expect = 6.4e-11
Identity = 30/68 (44.12%), Postives = 41/68 (60.29%), Query Frame = 0


Query: 89  LINGRPKGRIRATRDLCQGDPLSPFLFLLVVDALGRIICRGVEGKILEGFDIGQNKVPLS 148
           +ING P+G +  +R L QGDPLSP+LF+L  + L  +  R  E   L G  +  N   ++
Sbjct: 13  IINGAPQGLVTPSRGLRQGDPLSPYLFILCTEVLSGLCRRAQEQGRLPGIRVSNNSPRIN 72

Query: 149 HLQFADDT 157
           HL FADDT
Sbjct: 73  HLLFADDT 80

The following BLAST results are available for this feature:

BLAST of Lcy10g004870 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P11369	4.3e-12	26.89	LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE...	[more]
P08548	8.1e-11	29.01	LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1	[more]
O00370	1.8e-10	31.58	LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1	[more]
P92555	9.0e-10	44.12	Uncharacterized mitochondrial protein AtMg01250 OS=Arabidopsis thaliana OX=3702 ...	[more]
P0C2F6	2.7e-06	36.67	Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1...	[more]

BLAST of Lcy10g004870 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5H2XQW2	6.3e-75	43.82	TatD related DNase OS=Prunus dulcis OX=3755 GN=Prudu_862S001100 PE=4 SV=1	[more]
M5XHS0	8.3e-75	44.41	Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=...	[more]
A0A803P8A0	1.1e-74	43.99	Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1	[more]
A0A5E4F090	1.4e-74	44.12	Reverse transcriptase domain-containing protein (Fragment) OS=Prunus dulcis OX=3...	[more]
M5VS59	1.8e-74	44.12	Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=...	[more]

BLAST of Lcy10g004870 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_009335445.1	8.8e-79	45.29	PREDICTED: uncharacterized protein LOC103928158 [Pyrus x bretschneideri]	[more]
BBN69274.1	1.3e-74	43.82	TatD related DNase [Prunus dulcis]	[more]
VVA20479.1	2.9e-74	44.12	Hypothetical predicted protein, partial [Prunus dulcis]	[more]
BBN69746.1	1.1e-73	42.61	VIRB2-interacting protein 2 [Prunus dulcis]	[more]
VVA21938.1	1.1e-73	42.61	Hypothetical predicted protein, partial [Prunus dulcis]	[more]

BLAST of Lcy10g004870 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G24255.1	9.8e-12	35.56	RNA-directed DNA polymerase (reverse transcriptase)-related family protein	[more]
ATMG01250.1	6.4e-11	44.12	RNA-directed DNA polymerase (reverse transcriptase)	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 9..190 e-value: 5.3E-22 score: 78.4
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 1..228 score: 10.741026
None	No IPR available	PANTHER	PTHR33116:SF33	OS01G0885550 PROTEIN	coord: 25..367
None	No IPR available	PANTHER	PTHR33116	REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATED	coord: 25..367
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 39..201

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy10g004870.1	Lcy10g004870.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0050789	regulation of biological process