Lcy10g004740 (gene) Sponge gourd (P93075) v1

Overview
NameLcy10g004740
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionPentatricopeptide repeat-containing protein
LocationChr10: 12409520 .. 12418152 (+)
RNA-Seq ExpressionLcy10g004740
SyntenyLcy10g004740
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCATGCCCTCTCTCTCTCTCTAATCCATGGCGACACTGCCACCACACTGCCATTACCGCTCCTCTCACCACCACAAAATCTCCCATCCGCCCGACTTGACTGGTCGGAGCTTGAATTCCACTCTTCCTAAAACCCTCGTCATTTGCAAGAACTCGAAGAACGAGTCGGCGTTCGAAGAGAAAAAGCAAGTTTTGGTGGACTACGACCATGGCAAACACGAAATTCGGACCCTCGTTAACGGTTTCAGGAAACTCGATATTCCCAGGCGGTACCAGTTGCGAGTTGAGGGCGAACGATTCCAGAAGGACTGGACGGTCTCTGAGGTCGTCCAAAGGATTCTGAAGCTACAACGTCATGGTGATGTCGAGGCTTTGTTGAATTGCTGGGTTGGACGATTTTCTCGAAAGAATTACCCTGCTCTTATGAAGGTATTGCACTTCCTCTCTGTCTCCTTTTAACAGCTTTTTGTGCAATGGAAACAGTTTGTTGAACTCTAATTCTTCGACTGGAATGATTTTACAAGCTTGATATAAGTTATGAAGACTTGAGTTAACAAGCCTTTTCTTCTATACTACATGGGTTTTCTATGTCGGAAAATATATAACTAAGTGAATTTTTTTTGCAATTCTCAACTCAACCATCCTTTCCTCTTGTGGTAGGAATTGACTCAAAGTGGGTCTATTGAACACTGTGTTCAAGTATTTGATTGGATGAAGAACCAAAGGAATTATTGTGCCCGTAATGATATCTACAATATGATGATAAGGCTGCATGCCAGACATAACCGAACAGATCAAGCTCGTGGTTTGTTTTTTGAAATGCAAAAGTGGAGGTAGGTCTTAGATTCTCCATGTATTGTATTAGTCTTGAATAATGTTTCTCATATGATTCTGTGAAAATATTCTTGTTACTTTACTTTGTTGTAACACCATTTTGATCTCTGTTCAAATATTGTTAATTGAATAATATTTCTTATTAGATGCAAACCTGATGCTGAGACCTACAATGCCCTAATCAATGCACATGGTAGAGCAGGCCAATGGCGTTGGGCGATGAATATAATGGAAGACATGCTACGTGCTGCTGTGTGTACTTATATACTTCCCTTAAGATCTTAGTGGCTCTGACTGACTGTGAGCAACCTTCTTGTCTTTGATTGTTGAAGTGTATATATATACATATTTATTCATCTCTATGCTCATAATCCATTACCCCTCAATGTTCATTGATATCAAAGAACTAGGAATACATACCTTAAAAAGAAGTTAGTTAAAAAAACTCACAATATCAATACCTCAGGACCTATAAAGTGCTGCATTTGTACCATATCTTCAGCTCTAGGATCTATACTCGAGTGTGAGATAGTTTTTGTATATTAGCATCAAGTTCATCCCCTGTCAGCATTGAACAATCTTTCTAGCTTATTTACATTTTTGCAGGTTTGCTTCTTGGATTGTTACTTTCTTTCCTTTGCCTGCACCTTTAGGGGGTTTGATCTTTCTAGAGTGTTCGATTAATGATTGAATTTCTTTGTGAAGATCAGCCTCTGGCTTGTTTTGATTGAGAGTCCTATTCTCCAATCTATAAGAGAGAGAGGGGTGTGAGGAGGGGAGAAGGGCACTTTTTAGGAGAGTATCATGGCCGTTGAATAATTTTTTACTCTATTATTTGCATTGGGAAGCATGCTTCTGCAAAAGGTAGGGAGTCAACTCTTCATCAATGAAAAATTTTGTTTGGAATCTTATAGGTCTTGGGGGAGGGGTAAGAGAAGGTTGGTTTAGGAGCTTTTTCTCCAAGAAGACCTCGATATGGTTATTTTTTGAATCCAAATGACTTAGTTTTGTATCCATTTTGCTACATTCTTTGTTGATTGGCGGAGGAAACCTCAACCATATTCTTTAGAGTTGTAATTTTTCTCGTTTTGTTCGGAGTTCTTTCTTTGAGGTGTTTGGTTTTCAATTTGTTAGACACAAAGGTCTTTAGGAGATGATTGAGAAGTTCCTTCTCCATTCGCTGTTTCGGGACTAGGGGAAATTTTTGTGGCAGGCTGAGTTCTGTGTTGTTTTATGGAATTTATGGGGTGAGAGAAACAATAGAGCCTTTAGAGGGCTTGAGAGGGATGTGTGGTCTTGCCCCTTGTTAGATACTATGTTTCTCTCTGAGTGTCTGTGATGCATTTGTTTTATAACTATTGTTTTTAAGTATTGTATAGGCCTTATTTTAGTTGATTGGAGCCCCTTTCTCTAATGGAATTCCCTTTTGTGGGATAGAATTTTTTGTTTGCTCGTGTATTCTTTCATTTTTCATCAATGAAAGTATGGTTCTTTATCAAAAAAAATAAAAATAAAATAATGATCTAGTTTTCATTAGGAGTATTTAGAGAGGAAGGAGTGGATTGAGTTGCTTTTTGCTTTTGACTCTTGAGGTTGTAGGTACTAAAGGAGGTATCACGATGTTATGGAGTTAGCGGAACATGCCTTTACCTTTCCTTATCTGCAATCAAGTTGGACAATTCAAGTGTATGGGCCTATCTCATAGGGAGATGAAGGCTTTTTGGGAATACCTAGAAAGTCTTTACTGGTTGTGTGGGTCTTCTTGGTGTTTAGTTAGGGACTCTAATGTTCTTAGATTTCTGGTTGAAAAAAGGGGTATGGGGCTTCTCTAGATTTAAGAGAAAGTTGACAGGTTTTTTTAGGATGGTAGCTTTGTGGACCTCCAATGCTAGATTTACCTGGTCTAACTTGCATGAGAGGGGGCTTTATTCCATCCTTTAATTATAGATTTGAGGCCCTTTAGCTTTTTCATAAATCCATGGCCACCTGTGAGTAAGGTTTTTCCACCACCCTCCCACCGTCACTTCAAAGGAATGGTGATAGAGCCATATATTGACAAACTTGAACGAGGGTGGTGATCTTTCAGCACCAAATGTTGTGTTTCTTGGTAGTCCTTGTATAGAAAAGAACAACAATTGGAAAACAATATCAAACCACGCACTTATGCATCATTTAGTTGTCCTTCCAAGAAATGACAAAAAGAAAAGAGTTTTTATTTTTTTGTTTTCCAAAATCTATGAAGGGTAGGAATGATAGTCTTGAATGAAGGAAAATCGTGGGAAGGGAATACTTTGTGGAAGATTAAAGAGAAGAAAGGGAGGGAAGTATGCCAAAGTGTGAAGGAATGAAAGAGAAATTTATTTTCATGGAGTATAAAGCATTGAGAAGTTGGGGTAGATGAAGTGACATGCATCAAAAGTTGCAATGTTCTACATGGGAGAGGTAGATGCATAGTTTTCTATTTGGTTGCACGATATAAGTCCTTTCTTTCCTAGTTTTAGCCTTTTTTGAAGTCATGTATCAACTTTTTTGGCTGGTCTGAGTGGTCTCCGTCTCTTCTGTACTAAAACCCAAACTTTATTATACTTAATTTTGTACATTAAAAGACTAACTCCATTACAAGATTTTAAAAATTGTTCAGTTTCAACTGATATTACTTCTTGTTTATTTATACTTATAAAATAAGTATTATTAAAAAGAGAATAAATAATGAAGAAAGTTATAAAAAAAATATTGTAAATATCAAAATAATGTCATTGTACTAATGACCAAGAGGTTTGTGATTCAAATCCCCCAACCCCCACATGTTGTAAAAAAAAAATAATAATAGTAATAATAATGTCAATAAATTTATATAAATATTAAAATTTTAATTTTAATTGATCAATATAGATGATATTGTATAATGAAAATTATTATTTCCTAATTGATGCAGATCCCTCCTAGTCGATCAACGTTTAATAATTTGATAAATGCATGTGGATCTTGTGGAAATTGGCGAGAAGCATTGAGAGTTTGCAAGAAAATGACTGACAATGGGGTTGGCCCTGATCTTGTGACTCACAATATTGTTCTTTCTGCATATAAAAGTGGAGCTCAGTATTCAAAAGCTCTGTCATATTTTGAATTGATGAAGAGCACAAACATCCGACCTGACACAACTACACTTAATATTGTGATTCATTGTTTGATAAAGGTCAAACAATATGGGCAAGCCATTGAAATCTTTAATTCCATGCGGGAGAAGAGGGCTGAATGTCGCCCTGATGTTGTAACATTCACGAGCATCATTCATCTTTATTCTGTTTGTGGGCAGATTGAAGATTGTAAAGCTGTATTTAGTACAATGGTGGGGGAAGGCATAAAACCAAACATTGTTTCTTATAATGCTATAATAAGTGCATATGCTTCCCATGGGATGGATAGAGAAGCATTTTCAGTTTTTGATGACATGAAAAAGAGTGGTTTTCGCCCTGATGTTATATCTTATACATCTTTACTCAGTGCATTTGGAAGATCTCAGCAACCTGCAAGGGCTAGAGAAGTGTTTGATATGATGAAGAGAAACAAATGCAAGCCAAATCTTGTTAGCTATAATGCACTGATAGATGCATATGGATCTAATGGCTATTTAGCTCAAGCTGTTGACATCTTACGCGAGATGGAGCAAGATGGAATTCATCCAAATGTTGTTTCGATATGCACCCTCTTGGCTGCTTGTGGACGACTTGGTCAAAAGGTGAATATAGATGCTGTGCTTTCAGCTGCTGAGCTTCGGGGAATTCAATTGAACACTATTTCTTATAATTCAGCTATTGGGAGCTATATGAATATTGGTGAATATGAAAAGGCAATTAATTTGTATAGATTAATGAAGAAAGAGAGCTCTAAACCAGACTCTGTCACATATACTATCTTGATAAGTAGTTGTTGTAGGATGTCAAAATATGACGAGGCACTGTACTTTTTCAATGAAATGGTAGATGTAAGGATTCCTATGTCCAAAGAGGTCTACTCTTCTATGATCTGTGCCTACAGCAAACAGGTAAGCTCGAGACACCTCCCTCGTTTAGACTACCCATCAATTGAGATAAAATCCTGGTCTTTTATTGACCGTTTGATTTTCATATATTGCAGGGTCAACTTATGAAAGCAGAATCTTTGTTCAATTCAATGAAGGGGAGTGGTTGTTGTCCCGATTTAGTCACGTATACAGCAATGATAAATGCATATAGTGCATCTGGTAGGTTTTTTCAATTCATTGATCTGATTTGATAGACTAGAAAGAGAAATTGTTTTATTCTGAATTCTTGAAATTTAATTTTCATACCAGAGACATGGGAAAAGGCTTGCGCATTGTTTAATGAAATGGAAACAAATAACATTGAACTAGATCCTATAGCATGCTCCGCTTTGATGAAAGCATTTAATAAGGGAAACCAGGCTTCCAACGTTCTTATTCTGGCAGAAATTATGAAGGAGAAGGGAATTCCTTTCAACGATACCAATTTCTTTGAAATGTTGTCAGCTTGTAGCATGTAAGATTTTACATGTATATCTATTCAATGTTTTCTTTATATATATTTCGGTAGAATATTTGAAAGTCCACTTGTACTCTTTTATATGGTGAAGGTTAATTCACTGCCCTTCGGTAGAAAAATTTGCGAGCATTTGGTTTGGTTGGACTAGTAGAGTCACCTTGATCCTTGTGTATTCCTCTGAAGAGAATATACTTTAGCTGGATGAAATGTGAACTGACTAGGTGGTATCTGTGAATGTTTATTAAGTTGAATGTTTCAATAATTCAGGCATTTAAGAAACTTGTTCTCTTCTTAACTCAACATTTTTCTTAGGTTTTCCTACTCTACCTCCCGAACATATATCAACTGCCAGTCCACTCACTTAACTTCCCAAGGAACTCTTGACTAATTAATAACCATCTTAGCTCACAGTAACAGCTATAACAGTTAATGTATAATCATTACATTTTTGTCAAGGCCTCCCACTTTGTTTTGAATCTTTTTGACACGTAAGTTTTTCAGGTTTTACTTATTATGTTCATTCTTGATTTCTTTCCCTAAGAAACTATTTACTGTAATTTGTATGCAGACTACGAGATTGGAGTAAAGCAACTGACTTAATCAAGCTTATGGAGCCTTCTTTGCATCTTGTTTCAGTTGGAACTATTAACCATCTTCTGCATTTTCTGGGAAAAAGTGGAAAGACGGAGATTATGATGAAGGTTGTTGGAAAATACAAGTATATGTTGGGAATCAAGCAAATTTTTTACACATTCTTCCACTTCAATTTTTTTTTTCCTTTTCCTGACCTAAAAAAGCATGATATCTATGAACATAATTTAGATATGCAACTGTTTGTGTCCTTGTAATGCGTTGTACTTAAAGCTATTTTATTCCCAAACACAGCTGTTTTACAGATTCGTGGCATTGGGATCCAGTGTCAATATTAGTACTTATTCAATCTTGTTGAAGAATCTTTTGTCGGCTGGGAATTGGAGGAAATACATTGAGGTACCTATATATTTCAATATGGCATTTCAAAGTCCTTGAGCTGTTTATTCATGAAAATAATATATATCCATGACTACTGATTTTAGGAGTTGTGCATTACTTGGACGTCAGTTGTCCCATGTATTTCTGATATTTGAGTAATATCACTAAAGCAAATTGTAAGCCTAGAATTTGGAGCAGTACCATAAGAATAATTAGTCCTTGTCAATCTAAATCTTTTTGAATCTTTAGTTAAGATGCCAAGAGTGATGATTTGCAGGGCAGCATAAAACGTTTGAATGTTTTAATGCAAGTTAATATGTCGAAAGTGGTTCACACATTGCTTACTTCAATGTATTTTTTTTTTTAATTTCTAAAAAATATTTTGGAGTAATGTTTACTCTTAGGAAGTGTCTCCATGTGATTTATGTTTTATTACAAATTCCAAATAGTGTAACTGTCTCTACTCTTCGGTTCCTGTTTTTCAGTTTGTGGAGTTTGGCACAGTTTTGGTTTGTACTTTCCCCATTTGGTTCTGTTGAATAACACGATACAATTTTTTAAGTTTCTCATCATATACCCAGCCCATGCATACATGGTAGGATTGTAGAAATTTAAGTAAACTTACATGCAGGTATTGCAGTGGATGGATGATGCTGGAATTCAACCCTCAAATGCAATGTATAAGGACATACTTTACTTTGCACAAAATTGTGGTGGTGCTGAGTGCGCTGCTGTCATCAAAGGAAGAGTTGGTATGTGGTTGTTTAGTTCTATAATTATTATTATTATTTTAACGAAAGGAGCCAAGGAAAAAAAAGGGGAAAACATAGGAAAAGCCAAAAATATTACATCATTATTGACGAAAATAAACAAAGGATCGGTGTTGAACCTAGCCGTGGTCCAAACCTCCCCAATACATCTCTATCCGACCAAAAATCTTCTAGTTTATCTGAAGCTATATATCCCCCAAACTAATGAAAAAGATTGTCCTCTGCAAGCCCCCTATAACTATCCATATGAAGACTGAACTTTGAGTTAAAATAACTTTTGGTGAACTTGATCTGTTTCAACTGGACTCTGAAGCAGCTGGATGTTTCCCTAAATTAGAAATTTAAACTAGAGATATGATAAGACAAATAGGTTGTTATTTTATCTCAGGCTGGTGTATAAAGTTCAACTACTGAATTATAGAGTTTGTTACTGAGATTGTCAGACATTTCAGGTTGAATGTGTTGTCACTCTAGTTAAACGTGTTAACTGGTTTATTGGAACAAGAAACAAAGCTTTTCATTAATAGAATGAAAAGAGACTAATGCCTCAAAAATACAAACACCACAAAGGAAAGAAGAAGATACAGTCCAAAGAAAAAGAAAAACTATTAAAGAAGACCACCAGAGAACTAAGAGAACCAAAAAAAAAAAAAAAACTAAAGAAGGTTAGCTACAACTAAAAAACCAAAAAAAGAAAAAAAACAGCGAATTGATCAAATCGGAGAAGAGATCAAAACCACCAAGAGGCTGAAGAGACCAACTAAAAATGAAACAAGGAAAAGGAGAATTTCTAGAAAAACTCCACCACCAATGGAAACTGCACCAATGAAATCTGACGAGAGCCCAACTTGAAAAGATTAAACCCTGAGAGATTCAAAACTGAGCTAGCGAGAAAAATATGAAAGAGCTTTAACTGTCGGAGACAAATTAGGAATTTCCCGCATCTGTAACCCACATAACTCAATCAAAGAAGAAAATTTGGCTGGGTTTTGAGGAGACACCACCGAAGAAACTATTCCCTCGAAATTCTCGACACCTTGAACGTTAACTTCAAATAGATTTTCAAAAGCTTCAACAAATGAATCGTCCACAACTTGATCAACCAACTCAAATTCCAGAATATGAAAAATTGACTCCACACTGCTTATACTAACATCCGATTCTCCATCAATTGTGTTTCATCTCTGTTTGAAAGCCTCATTTAGTTTTACTATTTTGTTACCATTTTCGATCTTATAGTGATCTTTTGCACCATAATTCACATGCAGAATCTCTAAAAAGATAGGCTGGAGCAAGCTTTGTATCCATATCCTTTCATTTTATCTAGACGAGGTGTTCATGTGTCCGCCTCTACACAGATCAGGGTCTAGTTAACGCCTGCAACACTGCGCTTGAAAGCCTCTTGTTGAGAGATCCATTAGTAATTTGGACATTCAAGTTTTTATGTATATAGTTGGAATTTATGCACATCTATATCTTATATCTATAATCTATATAATGATAATATATAATCGAG

mRNA sequence

CTCATGCCCTCTCTCTCTCTCTAATCCATGGCGACACTGCCACCACACTGCCATTACCGCTCCTCTCACCACCACAAAATCTCCCATCCGCCCGACTTGACTGGTCGGAGCTTGAATTCCACTCTTCCTAAAACCCTCGTCATTTGCAAGAACTCGAAGAACGAGTCGGCGTTCGAAGAGAAAAAGCAAGTTTTGGTGGACTACGACCATGGCAAACACGAAATTCGGACCCTCGTTAACGGTTTCAGGAAACTCGATATTCCCAGGCGGTACCAGTTGCGAGTTGAGGGCGAACGATTCCAGAAGGACTGGACGGTCTCTGAGGTCGTCCAAAGGATTCTGAAGCTACAACGTCATGGTGATGTCGAGGCTTTGTTGAATTGCTGGGTTGGACGATTTTCTCGAAAGAATTACCCTGCTCTTATGAAGGAATTGACTCAAAGTGGGTCTATTGAACACTGTGTTCAAGTATTTGATTGGATGAAGAACCAAAGGAATTATTGTGCCCGTAATGATATCTACAATATGATGATAAGGCTGCATGCCAGACATAACCGAACAGATCAAGCTCGTGGTTTGTTTTTTGAAATGCAAAAGTGGAGATGCAAACCTGATGCTGAGACCTACAATGCCCTAATCAATGCACATGGTAGAGCAGGCCAATGGCGTTGGGCGATGAATATAATGGAAGACATGCTACGTGCTGCTATCCCTCCTAGTCGATCAACGTTTAATAATTTGATAAATGCATGTGGATCTTGTGGAAATTGGCGAGAAGCATTGAGAGTTTGCAAGAAAATGACTGACAATGGGGTTGGCCCTGATCTTGTGACTCACAATATTGTTCTTTCTGCATATAAAAGTGGAGCTCAGTATTCAAAAGCTCTGTCATATTTTGAATTGATGAAGAGCACAAACATCCGACCTGACACAACTACACTTAATATTGTGATTCATTGTTTGATAAAGGTCAAACAATATGGGCAAGCCATTGAAATCTTTAATTCCATGCGGGAGAAGAGGGCTGAATGTCGCCCTGATGTTGTAACATTCACGAGCATCATTCATCTTTATTCTGTTTGTGGGCAGATTGAAGATTGTAAAGCTGTATTTAGTACAATGGTGGGGGAAGGCATAAAACCAAACATTGTTTCTTATAATGCTATAATAAGTGCATATGCTTCCCATGGGATGGATAGAGAAGCATTTTCAGTTTTTGATGACATGAAAAAGAGTGGTTTTCGCCCTGATGTTATATCTTATACATCTTTACTCAGTGCATTTGGAAGATCTCAGCAACCTGCAAGGGCTAGAGAAGTGTTTGATATGATGAAGAGAAACAAATGCAAGCCAAATCTTGTTAGCTATAATGCACTGATAGATGCATATGGATCTAATGGCTATTTAGCTCAAGCTGTTGACATCTTACGCGAGATGGAGCAAGATGGAATTCATCCAAATGTTGTTTCGATATGCACCCTCTTGGCTGCTTGTGGACGACTTGGTCAAAAGGTGAATATAGATGCTGTGCTTTCAGCTGCTGAGCTTCGGGGAATTCAATTGAACACTATTTCTTATAATTCAGCTATTGGGAGCTATATGAATATTGGTGAATATGAAAAGGCAATTAATTTGTATAGATTAATGAAGAAAGAGAGCTCTAAACCAGACTCTGTCACATATACTATCTTGATAAGTAGTTGTTGTAGGATGTCAAAATATGACGAGGCACTGTACTTTTTCAATGAAATGGTAGATGTAAGGATTCCTATGTCCAAAGAGGTCTACTCTTCTATGATCTGTGCCTACAGCAAACAGGGTCAACTTATGAAAGCAGAATCTTTGTTCAATTCAATGAAGGGGAGTGGTTGTTGTCCCGATTTAGTCACGTATACAGCAATGATAAATGCATATAGTGCATCTGAGACATGGGAAAAGGCTTGCGCATTGTTTAATGAAATGGAAACAAATAACATTGAACTAGATCCTATAGCATGCTCCGCTTTGATGAAAGCATTTAATAAGGGAAACCAGGCTTCCAACGTTCTTATTCTGGCAGAAATTATGAAGGAGAAGGGAATTCCTTTCAACGATACCAATTTCTTTGAAATGTTGTCAGCTTGTAGCATACTACGAGATTGGAGTAAAGCAACTGACTTAATCAAGCTTATGGAGCCTTCTTTGCATCTTGTTTCAGTTGGAACTATTAACCATCTTCTGCATTTTCTGGGAAAAAGTGGAAAGACGGAGATTATGATGAAGCTGTTTTACAGATTCGTGGCATTGGGATCCAGTGTCAATATTAGTACTTATTCAATCTTGTTGAAGAATCTTTTGTCGGCTGGGAATTGGAGGAAATACATTGAGGTATTGCAGTGGATGGATGATGCTGGAATTCAACCCTCAAATGCAATGTATAAGGACATACTTTACTTTGCACAAAATTGTGGTGGTGCTGAGTGCGCTGCTGTCATCAAAGGAAGAGTTGAATCTCTAAAAAGATAGGCTGGAGCAAGCTTTGTATCCATATCCTTTCATTTTATCTAGACGAGGTGTTCATGTGTCCGCCTCTACACAGATCAGGGTCTAGTTAACGCCTGCAACACTGCGCTTGAAAGCCTCTTGTTGAGAGATCCATTAGTAATTTGGACATTCAAGTTTTTATGTATATAGTTGGAATTTATGCACATCTATATCTTATATCTATAATCTATATAATGATAATATATAATCGAG

Coding sequence (CDS)

ATGGCGACACTGCCACCACACTGCCATTACCGCTCCTCTCACCACCACAAAATCTCCCATCCGCCCGACTTGACTGGTCGGAGCTTGAATTCCACTCTTCCTAAAACCCTCGTCATTTGCAAGAACTCGAAGAACGAGTCGGCGTTCGAAGAGAAAAAGCAAGTTTTGGTGGACTACGACCATGGCAAACACGAAATTCGGACCCTCGTTAACGGTTTCAGGAAACTCGATATTCCCAGGCGGTACCAGTTGCGAGTTGAGGGCGAACGATTCCAGAAGGACTGGACGGTCTCTGAGGTCGTCCAAAGGATTCTGAAGCTACAACGTCATGGTGATGTCGAGGCTTTGTTGAATTGCTGGGTTGGACGATTTTCTCGAAAGAATTACCCTGCTCTTATGAAGGAATTGACTCAAAGTGGGTCTATTGAACACTGTGTTCAAGTATTTGATTGGATGAAGAACCAAAGGAATTATTGTGCCCGTAATGATATCTACAATATGATGATAAGGCTGCATGCCAGACATAACCGAACAGATCAAGCTCGTGGTTTGTTTTTTGAAATGCAAAAGTGGAGATGCAAACCTGATGCTGAGACCTACAATGCCCTAATCAATGCACATGGTAGAGCAGGCCAATGGCGTTGGGCGATGAATATAATGGAAGACATGCTACGTGCTGCTATCCCTCCTAGTCGATCAACGTTTAATAATTTGATAAATGCATGTGGATCTTGTGGAAATTGGCGAGAAGCATTGAGAGTTTGCAAGAAAATGACTGACAATGGGGTTGGCCCTGATCTTGTGACTCACAATATTGTTCTTTCTGCATATAAAAGTGGAGCTCAGTATTCAAAAGCTCTGTCATATTTTGAATTGATGAAGAGCACAAACATCCGACCTGACACAACTACACTTAATATTGTGATTCATTGTTTGATAAAGGTCAAACAATATGGGCAAGCCATTGAAATCTTTAATTCCATGCGGGAGAAGAGGGCTGAATGTCGCCCTGATGTTGTAACATTCACGAGCATCATTCATCTTTATTCTGTTTGTGGGCAGATTGAAGATTGTAAAGCTGTATTTAGTACAATGGTGGGGGAAGGCATAAAACCAAACATTGTTTCTTATAATGCTATAATAAGTGCATATGCTTCCCATGGGATGGATAGAGAAGCATTTTCAGTTTTTGATGACATGAAAAAGAGTGGTTTTCGCCCTGATGTTATATCTTATACATCTTTACTCAGTGCATTTGGAAGATCTCAGCAACCTGCAAGGGCTAGAGAAGTGTTTGATATGATGAAGAGAAACAAATGCAAGCCAAATCTTGTTAGCTATAATGCACTGATAGATGCATATGGATCTAATGGCTATTTAGCTCAAGCTGTTGACATCTTACGCGAGATGGAGCAAGATGGAATTCATCCAAATGTTGTTTCGATATGCACCCTCTTGGCTGCTTGTGGACGACTTGGTCAAAAGGTGAATATAGATGCTGTGCTTTCAGCTGCTGAGCTTCGGGGAATTCAATTGAACACTATTTCTTATAATTCAGCTATTGGGAGCTATATGAATATTGGTGAATATGAAAAGGCAATTAATTTGTATAGATTAATGAAGAAAGAGAGCTCTAAACCAGACTCTGTCACATATACTATCTTGATAAGTAGTTGTTGTAGGATGTCAAAATATGACGAGGCACTGTACTTTTTCAATGAAATGGTAGATGTAAGGATTCCTATGTCCAAAGAGGTCTACTCTTCTATGATCTGTGCCTACAGCAAACAGGGTCAACTTATGAAAGCAGAATCTTTGTTCAATTCAATGAAGGGGAGTGGTTGTTGTCCCGATTTAGTCACGTATACAGCAATGATAAATGCATATAGTGCATCTGAGACATGGGAAAAGGCTTGCGCATTGTTTAATGAAATGGAAACAAATAACATTGAACTAGATCCTATAGCATGCTCCGCTTTGATGAAAGCATTTAATAAGGGAAACCAGGCTTCCAACGTTCTTATTCTGGCAGAAATTATGAAGGAGAAGGGAATTCCTTTCAACGATACCAATTTCTTTGAAATGTTGTCAGCTTGTAGCATACTACGAGATTGGAGTAAAGCAACTGACTTAATCAAGCTTATGGAGCCTTCTTTGCATCTTGTTTCAGTTGGAACTATTAACCATCTTCTGCATTTTCTGGGAAAAAGTGGAAAGACGGAGATTATGATGAAGCTGTTTTACAGATTCGTGGCATTGGGATCCAGTGTCAATATTAGTACTTATTCAATCTTGTTGAAGAATCTTTTGTCGGCTGGGAATTGGAGGAAATACATTGAGGTATTGCAGTGGATGGATGATGCTGGAATTCAACCCTCAAATGCAATGTATAAGGACATACTTTACTTTGCACAAAATTGTGGTGGTGCTGAGTGCGCTGCTGTCATCAAAGGAAGAGTTGAATCTCTAAAAAGATAG

Protein sequence

MATLPPHCHYRSSHHHKISHPPDLTGRSLNSTLPKTLVICKNSKNESAFEEKKQVLVDYDHGKHEIRTLVNGFRKLDIPRRYQLRVEGERFQKDWTVSEVVQRILKLQRHGDVEALLNCWVGRFSRKNYPALMKELTQSGSIEHCVQVFDWMKNQRNYCARNDIYNMMIRLHARHNRTDQARGLFFEMQKWRCKPDAETYNALINAHGRAGQWRWAMNIMEDMLRAAIPPSRSTFNNLINACGSCGNWREALRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELMKSTNIRPDTTTLNIVIHCLIKVKQYGQAIEIFNSMREKRAECRPDVVTFTSIIHLYSVCGQIEDCKAVFSTMVGEGIKPNIVSYNAIISAYASHGMDREAFSVFDDMKKSGFRPDVISYTSLLSAFGRSQQPARAREVFDMMKRNKCKPNLVSYNALIDAYGSNGYLAQAVDILREMEQDGIHPNVVSICTLLAACGRLGQKVNIDAVLSAAELRGIQLNTISYNSAIGSYMNIGEYEKAINLYRLMKKESSKPDSVTYTILISSCCRMSKYDEALYFFNEMVDVRIPMSKEVYSSMICAYSKQGQLMKAESLFNSMKGSGCCPDLVTYTAMINAYSASETWEKACALFNEMETNNIELDPIACSALMKAFNKGNQASNVLILAEIMKEKGIPFNDTNFFEMLSACSILRDWSKATDLIKLMEPSLHLVSVGTINHLLHFLGKSGKTEIMMKLFYRFVALGSSVNISTYSILLKNLLSAGNWRKYIEVLQWMDDAGIQPSNAMYKDILYFAQNCGGAECAAVIKGRVESLKR
Homology
[Close]
BLAST of Lcy10g004740 vs. ExPASy Swiss-Prot
Match: Q8RWS8 (Pentatricopeptide repeat-containing protein At2g41720 OS=Arabidopsis thaliana OX=3702 GN=EMB2654 PE=2 SV=1)

HSP 1 Score: 1104.0 bits (2854), Expect = 0.0e+00
Identity = 522/782 (66.75%), Postives = 641/782 (81.97%), Query Frame = 0 

Query: 43  SKNESAFEEKKQVLVDYDHGKHEIRTLVNGFRKLDIPRRYQLRVEGERFQKDWTVSEVVQ 102
           +K   AF+EKK V V+YD G+HE+   + G RK DIPRRY++RVE +RFQKDW+VSEVV 
Sbjct: 24  TKASDAFQEKKSVSVNYDRGEHEVSVNIGGLRKADIPRRYRIRVENDRFQKDWSVSEVVD 83

Query: 103 RILKLQRHGDVEALLNCWVGRFSRKNYPALMKELTQSGSIEHCVQVFDWMKNQRNYCARN 162
           R++ L R  +V+ +LN WVGRF+RKN+P L++EL++ G IE CV VF WMK Q+NYCARN
Sbjct: 84  RLMALNRWEEVDGVLNSWVGRFARKNFPVLIRELSRRGCIELCVNVFKWMKIQKNYCARN 143

Query: 163 DIYNMMIRLHARHNRTDQARGLFFEMQKWRCKPDAETYNALINAHGRAGQWRWAMNIMED 222
           DIYNMMIRLHARHN  DQARGLFFEMQKW CKPDAETY+ALINAHGRAGQWRWAMN+M+D
Sbjct: 144 DIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDD 203

Query: 223 MLRAAIPPSRSTFNNLINACGSCGNWREALRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQ 282
           MLRAAI PSRST+NNLINACGS GNWREAL VCKKMTDNGVGPDLVTHNIVLSAYKSG Q
Sbjct: 204 MLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQ 263

Query: 283 YSKALSYFELMKSTNIRPDTTTLNIVIHCLIKVKQYGQAIEIFNSMREKRAECRPDVVTF 342
           YSKALSYFELMK   +RPDTTT NI+I+CL K+ Q  QA+++FNSMREKRAECRPDVVTF
Sbjct: 264 YSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTF 323

Query: 343 TSIIHLYSVCGQIEDCKAVFSTMVGEGIKPNIVSYNAIISAYASHGMDREAFSVFDDMKK 402
           TSI+HLYSV G+IE+C+AVF  MV EG+KPNIVSYNA++ AYA HGM   A SV  D+K+
Sbjct: 324 TSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQ 383

Query: 403 SGFRPDVISYTSLLSAFGRSQQPARAREVFDMMKRNKCKPNLVSYNALIDAYGSNGYLAQ 462
           +G  PDV+SYT LL+++GRS+QP +A+EVF MM++ + KPN+V+YNALIDAYGSNG+LA+
Sbjct: 384 NGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAE 443

Query: 463 AVDILREMEQDGIHPNVVSICTLLAACGRLGQKVNIDAVLSAAELRGIQLNTISYNSAIG 522
           AV+I R+MEQDGI PNVVS+CTLLAAC R  +KVN+D VLSAA+ RGI LNT +YNSAIG
Sbjct: 444 AVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIG 503

Query: 523 SYMNIGEYEKAINLYRLMKKESSKPDSVTYTILISSCCRMSKYDEALYFFNEMVDVRIPM 582
           SY+N  E EKAI LY+ M+K+  K DSVT+TILIS  CRMSKY EA+ +  EM D+ IP+
Sbjct: 504 SYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPL 563

Query: 583 SKEVYSSMICAYSKQGQLMKAESLFNSMKGSGCCPDLVTYTAMINAYSASETWEKACALF 642
           +KEVYSS++CAYSKQGQ+ +AES+FN MK +GC PD++ YT+M++AY+ASE W KAC LF
Sbjct: 564 TKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELF 623

Query: 643 NEMETNNIELDPIACSALMKAFNKGNQASNVLILAEIMKEKGIPFNDTNFFEMLSACSIL 702
            EME N IE D IACSALM+AFNKG Q SNV +L ++M+EK IPF    FFE+ SAC+ L
Sbjct: 624 LEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTL 683

Query: 703 RDWSKATDLIKLMEPSLHLVSVGTINHLLHFLGKSGKTEIMMKLFYRFVALGSSVNISTY 762
           ++W +A DLI++M+P L  +S+G  N +LH  GKSGK E MMKLFY+ +A G  +N+ TY
Sbjct: 684 QEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTY 743

Query: 763 SILLKNLLSAGNWRKYIEVLQWMDDAGIQPSNAMYKDILYFAQNCGGAECAAVIKGRVES 822
           +ILL++LL+ GNWRKYIEVL+WM  AGIQPSN MY+DI+ F +   G E   +I+ ++ES
Sbjct: 744 AILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDIISFGERSAGIEFEPLIRQKLES 803

Query: 823 LK 825
           L+
Sbjct: 804 LR 805

[Close]
BLAST of Lcy10g004740 vs. ExPASy Swiss-Prot
Match: Q9LYZ9 (Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana OX=3702 GN=At5g02860 PE=2 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 1.6e-64
Identity = 156/631 (24.72%), Postives = 306/631 (48.49%), Query Frame = 0 

Query: 172 HARHNRTDQARGLFFEMQKWRCKPDAETYNALINAHGRAGQWRWAMNIMEDMLRAAIPPS 231
           H + +   +A   F + + ++   D      +I+  G+ G+   A N+   +        
Sbjct: 148 HKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLD 207

Query: 232 RSTFNNLINACGSCGNWREALRVCKKMTDNGVGPDLVTHNIVLSAY-KSGAQYSKALSYF 291
             ++ +LI+A  + G +REA+ V KKM ++G  P L+T+N++L+ + K G  ++K  S  
Sbjct: 208 VYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLV 267

Query: 292 ELMKSTNIRPDTTTLNIVIHCLIKVKQYGQAIEIFNSMREKRAECRPDVVTFTSIIHLYS 351
           E MKS  I PD  T N +I C  +   + +A ++F  M  K A    D VT+ +++ +Y 
Sbjct: 268 EKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEM--KAAGFSYDKVTYNALLDVYG 327

Query: 352 VCGQIEDCKAVFSTMVGEGIKPNIVSYNAIISAYASHGMDREAFSVFDDMKKSGFRPDVI 411
              + ++   V + MV  G  P+IV+YN++ISAYA  GM  EA  + + M + G +PDV 
Sbjct: 328 KSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVF 387

Query: 412 SYTSLLSAFGRSQQPARAREVFDMMKRNKCKPNLVSYNALIDAYGSNGYLAQAVDILREM 471
           +YT+LLS F R+ +   A  +F+ M+   CKPN+ ++NA I  YG+ G   + + I  E+
Sbjct: 388 TYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEI 447

Query: 472 EQDGIHPNVVSICTLLAACGRLGQKVNIDAVLSAAELRGIQLNTISYNSAIGSYMNIGEY 531
              G+ P++V+  TLLA  G+ G    +  V    +  G      ++N+ I +Y   G +
Sbjct: 448 NVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 507

Query: 532 EKAINLYRLMKKESSKPDSVTYTILISSCCRMSKYDEALYFFNEMVDVRIPMSKEVYSSM 591
           E+A+ +YR M      PD  TY  ++++  R   ++++     EM D R   ++  Y S+
Sbjct: 508 EQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSL 567

Query: 592 ICAYSKQGQLMKAESLFNSMKGSGCCPDLVTYTAMINAYSASETWEKACALFNEMETNNI 651
           + AY+   ++    SL   +      P  V    ++   S  +   +A   F+E++    
Sbjct: 568 LHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGF 627

Query: 652 ELDPIACSALMKAFNKGNQASNVLILAEIMKEKGIPFNDTNFFEMLSACSILRDWSKATD 711
             D    ++++  + +    +    + + MKE+G   +   +  ++   S   D+ K+ +
Sbjct: 628 SPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEE 687

Query: 712 LIKLMEPSLHLVSVGTINHLLHFLGKSGKTEIMMKLFYRFVALGSSVNISTYSILLKNLL 771
           +++ +        + + N +++   ++ +     ++F      G   ++ TY+  + +  
Sbjct: 688 ILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYA 747

Query: 772 SAGNWRKYIEVLQWMDDAGIQPSNAMYKDIL 802
           +   + + I V+++M   G +P+   Y  I+
Sbjct: 748 ADSMFEEAIGVVRYMIKHGCRPNQNTYNSIV 776

[Close]
BLAST of Lcy10g004740 vs. ExPASy Swiss-Prot
Match: Q9S7Q2 (Pentatricopeptide repeat-containing protein At1g74850, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PTAC2 PE=2 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 1.7e-61
Identity = 163/598 (27.26%), Postives = 280/598 (46.82%), Query Frame = 0 

Query: 86  VEGERFQKDWTVSEVVQRILKLQRHGDVEALLNCWVGRFSRKNYPALMKELTQSGSIEHC 145
           V  E+ +  + V  ++ ++  L   G +   L+ +  + S  ++  + KE    G  +  
Sbjct: 65  VSVEKGKYSYDVESLINKLSSLPPRGSIARCLDIFKNKLSLNDFALVFKEFAGRGDWQRS 124

Query: 146 VQVFDWMKNQRNYCARND-IYNMMIRLHARHNRTDQARGLFFEMQKWRCKPDAETYNALI 205
           +++F +M+ Q  +C  N+ IY +MI L  R    D+   +F EM          +Y ALI
Sbjct: 125 LRLFKYMQRQ-IWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALI 184

Query: 206 NAHGRAGQWRWAMNIMEDMLRAAIPPSRSTFNNLINACGSCG-NWREALRVCKKMTDNGV 265
           NA+GR G++  ++ +++ M    I PS  T+N +INAC   G +W   L +  +M   G+
Sbjct: 185 NAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGI 244

Query: 266 GPDLVTHNIVLSAYKSGAQYSKALSYFELMKSTNIRPDTTTLNIVIHCLIKVKQYGQAIE 325
            PD+VT+N +LSA        +A   F  M    I PD TT             Y   +E
Sbjct: 245 QPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTT-------------YSHLVE 304

Query: 326 IFNSMREKRAECRPDVVTFTSIIHLYSVCGQIEDCKAVFSTMVGEGIKPNIVSYNAIISA 385
            F  +R                  L  VC        +   M   G  P+I SYN ++ A
Sbjct: 305 TFGKLR-----------------RLEKVCD-------LLGEMASGGSLPDITSYNVLLEA 364

Query: 386 YASHGMDREAFSVFDDMKKSGFRPDVISYTSLLSAFGRSQQPARAREVFDMMKRNKCKPN 445
           YA  G  +EA  VF  M+ +G  P+  +Y+ LL+ FG+S +    R++F  MK +   P+
Sbjct: 365 YAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPD 424

Query: 446 LVSYNALIDAYGSNGYLAQAVDILREMEQDGIHPNVVSICTLLAACGRLGQKVNIDAVLS 505
             +YN LI+ +G  GY  + V +  +M ++ I P++ +   ++ ACG+ G   +   +L 
Sbjct: 425 AATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQ 484

Query: 506 AAELRGIQLNTISYNSAIGSYMNIGEYEKAINLYRLMKKESSKPDSVTYTILISSCCRMS 565
                 I  ++ +Y   I ++     YE+A+  +  M +  S P   T+  L+ S  R  
Sbjct: 485 YMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGG 544

Query: 566 KYDEALYFFNEMVDVRIPMSKEVYSSMICAYSKQGQLMKAESLFNSMKGSGCCPDLVTYT 625
              E+    + +VD  IP +++ +++ I AY + G+  +A   +  M+ S C PD  T  
Sbjct: 545 LVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLE 604

Query: 626 AMINAYSASETWEKACALFNEMETNNIELDPIACSALMKA-FNKGNQASNVLILAEIM 681
           A+++ YS +   ++    F EM+ ++I L  I C  +M A + K  +  +V  L E M
Sbjct: 605 AVLSVYSFARLVDECREQFEEMKASDI-LPSIMCYCMMLAVYGKTERWDDVNELLEEM 623

[Close]
BLAST of Lcy10g004740 vs. ExPASy Swiss-Prot
Match: Q76C99 (Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=Rf1 PE=2 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 2.2e-58
Identity = 152/610 (24.92%), Postives = 289/610 (47.38%), Query Frame = 0 

Query: 195 PDAETYNALINAHGRAGQWRWAMNIMEDMLRAAIPPSRSTFNNLINACGSCGNWR--EAL 254
           PD  TY  LI    RAG+       + ++++         F  L+   G C + R  +A+
Sbjct: 85  PDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLK--GLCADKRTSDAM 144

Query: 255 R-VCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELM---KSTNIRPDTTTLNIV 314
             V ++MT+ G  P++ ++NI+L       +  +AL    +M   +     PD  +   V
Sbjct: 145 DIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTV 204

Query: 315 IHCLIKVKQYGQAIEIFNSMREKRAECRPDVVTFTSIIHLYSVCGQIEDCKAVFSTMVGE 374
           I+   K     +A   ++ M ++     PDVVT+ SII        ++    V +TMV  
Sbjct: 205 INGFFKEGDSDKAYSTYHEMLDR--GILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKN 264

Query: 375 GIKPNIVSYNAIISAYASHGMDREAFSVFDDMKKSGFRPDVISYTSLLSAFGRSQQPARA 434
           G+ P+ ++YN+I+  Y S G  +EA      M+  G  PDV++Y+ L+    ++ +   A
Sbjct: 265 GVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEA 324

Query: 435 REVFDMMKRNKCKPNLVSYNALIDAYGSNGYLAQAVDILREMEQDGIHPNVVSICTLLAA 494
           R++FD M +   KP + +Y  L+  Y + G L +   +L  M ++GIHP+      L+ A
Sbjct: 325 RKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICA 384

Query: 495 CGRLGQKVNIDAVLSAAELRGIQLNTISYNSAIGSYMNIGEYEKAINLYRLMKKESSKPD 554
             + G+      V S    +G+  N ++Y + IG     G  E A+  +  M  E   P 
Sbjct: 385 YAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPG 444

Query: 555 SVTYTILISSCCRMSKYDEALYFFNEMVDVRIPMSKEVYSSMICAYSKQGQLMKAESLFN 614
           ++ Y  LI   C  +K++ A     EM+D  I ++   ++S+I ++ K+G+++++E LF 
Sbjct: 445 NIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFE 504

Query: 615 SMKGSGCCPDLVTYTAMINAYSASETWEKACALFNEMETNNIELDPIACSALMKAFNKGN 674
            M   G  P+++TY  +IN Y  +   ++A  L + M +  ++ + +  S L+  + K +
Sbjct: 505 LMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKIS 564

Query: 675 QASNVLILAEIMKEKGIPFNDTNFFEMLSACSILRDWSKATDLIKLMEPSLHLVSVGTIN 734
           +  + L+L + M+  G+  +   +  +L      R  + A +L   +  S   + + T N
Sbjct: 565 RMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYN 624

Query: 735 HLLHFLGKSGKTEIMMKLFYRFVALGSSVNISTYSILLKNLLSAGNWRKYIEVLQWMDDA 794
            +LH L K+  T+  +++F     +   +   T++I++  LL  G   +  ++       
Sbjct: 625 IILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSN 684

Query: 795 GIQPSNAMYK 799
           G+ P+   Y+
Sbjct: 685 GLVPNYWTYR 690

[Close]
BLAST of Lcy10g004740 vs. ExPASy Swiss-Prot
Match: Q9FJE6 (Putative pentatricopeptide repeat-containing protein At5g59900 OS=Arabidopsis thaliana OX=3702 GN=At5g59900 PE=3 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 1.2e-56
Identity = 175/736 (23.78%), Postives = 325/736 (44.16%), Query Frame = 0 

Query: 96  TVSEVVQRILKLQRHGDVEALLNCWVGRFSRKN---YPALMKELTQSGSIEHCVQVFDWM 155
           T+S ++  ++K +  G    L N  V    R +   Y  +++ L +   +    ++   M
Sbjct: 194 TLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHM 253

Query: 156 KNQRNYCARNDI-YNMMIRLHARHNRTDQARGLFFEMQKWRCKPDAETYNALINAHGRAG 215
             +   C  N + YN++I    +  +  +A G+  ++     KPD  TY  L+    +  
Sbjct: 254 --EATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQ 313

Query: 216 QWRWAMNIMEDMLRAAIPPSRSTFNNLINACGSCGNWREALRVCKKMTDNGVGPDLVTHN 275
           ++   + +M++ML     PS +  ++L+      G   EAL + K++ D GV P+L  +N
Sbjct: 314 EFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYN 373

Query: 276 IVLSAYKSGAQYSKALSYFELMKSTNIRPDTTTLNIVIHCLIKVKQYGQAIEIFNSMREK 335
            ++ +   G ++ +A   F+ M    +RP+  T +I+I    +  +   A+     M + 
Sbjct: 374 ALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVD- 433

Query: 336 RAECRPDVVTFTSIIHLYSVCGQIEDCKAVFSTMVGEGIKPNIVSYNAIISAYASHGMDR 395
               +  V  + S+I+ +   G I   +   + M+ + ++P +V+Y +++  Y S G   
Sbjct: 434 -TGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKIN 493

Query: 396 EAFSVFDDMKKSGFRPDVISYTSLLSAFGRSQQPARAREVFDMMKRNKCKPNLVSYNALI 455
           +A  ++ +M   G  P + ++T+LLS   R+     A ++F+ M     KPN V+YN +I
Sbjct: 494 KALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMI 553

Query: 456 DAYGSNGYLAQAVDILREMEQDGIHPNVVSICTLLAACGRLGQKVNIDAVLSAAELRGIQ 515
           + Y   G +++A + L+EM + GI P+  S   L+      GQ       +        +
Sbjct: 554 EGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCE 613

Query: 516 LNTISYNSAIGSYMNIGEYEKAINLYRLMKKESSKPDSVTYTILISSCCRMSKYDEALYF 575
           LN I Y   +  +   G+ E+A+++ + M +     D V Y +LI     +   D  L+F
Sbjct: 614 LNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDG--SLKHKDRKLFF 673

Query: 576 --FNEMVDVRIPMSKEVYSSMICAYSKQGQLMKAESLFNSMKGSGCCPDLVTYTAMINAY 635
               EM D  +     +Y+SMI A SK G   +A  +++ M   GC P+ VTYTA+IN  
Sbjct: 674 GLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGL 733

Query: 636 SASETWEKACALFNEMETNNIELDPIACSALMKAFNKGNQASNVLILAEIMKEKGIPFND 695
             +          NE E        + CS +    +  NQ +                  
Sbjct: 734 CKA-------GFVNEAE--------VLCSKMQPVSSVPNQVTYGC--------------- 793

Query: 696 TNFFEMLSACSILRDWSKATDLIKLMEPSLHLVSVGTINHLLHFLGKSGKTEIMMKLFYR 755
             F ++L+   +  D  KA +L   +   L L +  T N L+    + G+ E   +L  R
Sbjct: 794 --FLDILTKGEV--DMQKAVELHNAILKGL-LANTATYNMLIRGFCRQGRIEEASELITR 853

Query: 756 FVALGSSVNISTYSILLKNLLSAGNWRKYIEVLQWMDDAGIQPSNAMYKDILYFAQNCGG 815
            +  G S +  TY+ ++  L    + +K IE+   M + GI+P    Y  +++    C  
Sbjct: 854 MIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGC--CVA 886

Query: 816 AECAAVIKGRVESLKR 826
            E     + R E L++
Sbjct: 914 GEMGKATELRNEMLRQ 886

[Close]
BLAST of Lcy10g004740 vs. ExPASy TrEMBL
Match: A0A6J1J042 (pentatricopeptide repeat-containing protein At2g41720 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111482245 PE=4 SV=1)

HSP 1 Score: 1550.8 bits (4014), Expect = 0.0e+00
Identity = 750/825 (90.91%), Postives = 796/825 (96.48%), Query Frame = 0 

Query: 1   MATLPPHCHYRSSHHHKISHPPDLTGRSLNSTLPKTLVICKNSKNESAFEEKKQVLVDYD 60
           MATLPPHC +R S HHK S+  DLTGRSL+STLPKTL+ICKNSKNESAFEE KQVLVDYD
Sbjct: 1   MATLPPHCPHRPSRHHKFSYTADLTGRSLDSTLPKTLIICKNSKNESAFEETKQVLVDYD 60

Query: 61  HGKHEIRTLVNGFRKLDIPRRYQLRVEGERFQKDWTVSEVVQRILKLQRHGDVEALLNCW 120
           +GKHE+RTLVNG RKLDIPRRYQLRV GERFQKDWTV+EVVQRILKLQRHGDVEALLNCW
Sbjct: 61  NGKHEVRTLVNGLRKLDIPRRYQLRVGGERFQKDWTVTEVVQRILKLQRHGDVEALLNCW 120

Query: 121 VGRFSRKNYPALMKELTQSGSIEHCVQVFDWMKNQRNYCARNDIYNMMIRLHARHNRTDQ 180
           VGRF+RKNYPALMKELTQ+GSIEHCVQVFDWMKNQ+NYCARNDIYNMMIRLHARHNR DQ
Sbjct: 121 VGRFARKNYPALMKELTQNGSIEHCVQVFDWMKNQKNYCARNDIYNMMIRLHARHNRIDQ 180

Query: 181 ARGLFFEMQKWRCKPDAETYNALINAHGRAGQWRWAMNIMEDMLRAAIPPSRSTFNNLIN 240
           ARGLFFEMQKWRCKPDAETYN+LINAHGRAGQWRWAMNI+EDMLRAAIPPSRSTFNNLIN
Sbjct: 181 ARGLFFEMQKWRCKPDAETYNSLINAHGRAGQWRWAMNILEDMLRAAIPPSRSTFNNLIN 240

Query: 241 ACGSCGNWREALRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELMKSTNIRP 300
           ACGS GNWREALRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELMK TNIRP
Sbjct: 241 ACGSSGNWREALRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELMKGTNIRP 300

Query: 301 DTTTLNIVIHCLIKVKQYGQAIEIFNSMREKRAECRPDVVTFTSIIHLYSVCGQIEDCKA 360
           DTTTLNIVIHCLIKVKQYGQAIEIFNSMREKRAECRPDVVTFT+IIHLYSVCGQIEDCKA
Sbjct: 301 DTTTLNIVIHCLIKVKQYGQAIEIFNSMREKRAECRPDVVTFTTIIHLYSVCGQIEDCKA 360

Query: 361 VFSTMVGEGIKPNIVSYNAIISAYASHGMDREAFSVFDDMKKSGFRPDVISYTSLLSAFG 420
           VFSTM+GEGIKPNIVSYNA+ISAYASHGMD+EA +VFD+MK+SGFRPDV+SYTSLLS FG
Sbjct: 361 VFSTMLGEGIKPNIVSYNALISAYASHGMDKEASTVFDEMKRSGFRPDVVSYTSLLSTFG 420

Query: 421 RSQQPARAREVFDMMKRNKCKPNLVSYNALIDAYGSNGYLAQAVDILREMEQDGIHPNVV 480
           RSQQP RAREVFDMMKRNKCKPNLVSYNALIDAYGSNGYLAQAVDILREMEQDGIHPNVV
Sbjct: 421 RSQQPTRAREVFDMMKRNKCKPNLVSYNALIDAYGSNGYLAQAVDILREMEQDGIHPNVV 480

Query: 481 SICTLLAACGRLGQKVNIDAVLSAAELRGIQLNTISYNSAIGSYMNIGEYEKAINLYRLM 540
           SICTLLA+CGR GQKVN+DAVLSAAELRGI+LNTI+YNSAIGSYMNIGEYEKAI+LYR M
Sbjct: 481 SICTLLASCGRFGQKVNVDAVLSAAELRGIRLNTIAYNSAIGSYMNIGEYEKAIDLYRSM 540

Query: 541 KKESSKPDSVTYTILISSCCRMSKYDEALYFFNEMVDVRIPMSKEVYSSMICAYSKQGQL 600
           K +++KPDSVTY ILISSCCRMSKYDEA++FF EMVD++IP+S+E+YSSMICAYSKQGQL
Sbjct: 541 KNKNTKPDSVTYNILISSCCRMSKYDEAIHFFKEMVDLKIPLSEEIYSSMICAYSKQGQL 600

Query: 601 MKAESLFNSMKGSGCCPDLVTYTAMINAYSASETWEKACALFNEMETNNIELDPIACSAL 660
           +KAE+LFNS+KGSGCCPDLVTYTAMINAYS +ETWEKAC+L++EMETNNI+LD IACSAL
Sbjct: 601 VKAETLFNSLKGSGCCPDLVTYTAMINAYSTTETWEKACSLYHEMETNNIQLDSIACSAL 660

Query: 661 MKAFNKGNQASNVLILAEIMKEKGIPFNDTNFFEMLSACSILRDWSKATDLIKLMEPSLH 720
           MKA+NKGNQASNVLILAEIMKEKGIPFND NFFEMLSACS LRDW KATD+IKLMEPSLH
Sbjct: 661 MKAYNKGNQASNVLILAEIMKEKGIPFNDANFFEMLSACSTLRDWRKATDIIKLMEPSLH 720

Query: 721 LVSVGTINHLLHFLGKSGKTEIMMKLFYRFVALGSSVNISTYSILLKNLLSAGNWRKYIE 780
           LVSVGTINHLLHFLGKSGK EIMMKLFYRFVALGSSVNISTYSILLKNLLS GNWRKYIE
Sbjct: 721 LVSVGTINHLLHFLGKSGKMEIMMKLFYRFVALGSSVNISTYSILLKNLLSFGNWRKYIE 780

Query: 781 VLQWMDDAGIQPSNAMYKDILYFAQNCGGAECAAVIKGRVESLKR 826
           VLQWMDDAGIQPSNAMY DILYFAQNCGGAECAA+IK RVESLKR
Sbjct: 781 VLQWMDDAGIQPSNAMYNDILYFAQNCGGAECAAIIKERVESLKR 825

[Close]
BLAST of Lcy10g004740 vs. ExPASy TrEMBL
Match: A0A6J1F7H2 (pentatricopeptide repeat-containing protein At2g41720 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111441562 PE=4 SV=1)

HSP 1 Score: 1547.7 bits (4006), Expect = 0.0e+00
Identity = 747/825 (90.55%), Postives = 794/825 (96.24%), Query Frame = 0 

Query: 1   MATLPPHCHYRSSHHHKISHPPDLTGRSLNSTLPKTLVICKNSKNESAFEEKKQVLVDYD 60
           MATLPPHC++  SHHHK S+P DLTGRS++ST PKTL+ICKNSKNESAFEE KQVLVDYD
Sbjct: 1   MATLPPHCYHSPSHHHKFSYPADLTGRSVDSTFPKTLIICKNSKNESAFEETKQVLVDYD 60

Query: 61  HGKHEIRTLVNGFRKLDIPRRYQLRVEGERFQKDWTVSEVVQRILKLQRHGDVEALLNCW 120
           +GKHE+RTLVNG RKLDIPRRYQLRV GERFQKDWTV+EVVQRILKLQR+GDVEALLNCW
Sbjct: 61  NGKHEVRTLVNGLRKLDIPRRYQLRVGGERFQKDWTVTEVVQRILKLQRYGDVEALLNCW 120

Query: 121 VGRFSRKNYPALMKELTQSGSIEHCVQVFDWMKNQRNYCARNDIYNMMIRLHARHNRTDQ 180
           VGRF+RKNYPALMKELTQ+GSIEHCVQVF WMKNQ+NYCARNDIYNMMIRLH RHNR DQ
Sbjct: 121 VGRFARKNYPALMKELTQNGSIEHCVQVFVWMKNQKNYCARNDIYNMMIRLHTRHNRIDQ 180

Query: 181 ARGLFFEMQKWRCKPDAETYNALINAHGRAGQWRWAMNIMEDMLRAAIPPSRSTFNNLIN 240
           ARGLFFEMQKWRCKPDAETYN+LINAHGRAGQWRWAMNIMEDMLRAAIPPSRSTFNNLIN
Sbjct: 181 ARGLFFEMQKWRCKPDAETYNSLINAHGRAGQWRWAMNIMEDMLRAAIPPSRSTFNNLIN 240

Query: 241 ACGSCGNWREALRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELMKSTNIRP 300
           ACGS GNWREALRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELMK TNIRP
Sbjct: 241 ACGSSGNWREALRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELMKGTNIRP 300

Query: 301 DTTTLNIVIHCLIKVKQYGQAIEIFNSMREKRAECRPDVVTFTSIIHLYSVCGQIEDCKA 360
           DTTTLNIVIHCLIKVKQYGQAIEIFNSMREKRAECRPDVVTFTSIIHLYSVCGQIEDCKA
Sbjct: 301 DTTTLNIVIHCLIKVKQYGQAIEIFNSMREKRAECRPDVVTFTSIIHLYSVCGQIEDCKA 360

Query: 361 VFSTMVGEGIKPNIVSYNAIISAYASHGMDREAFSVFDDMKKSGFRPDVISYTSLLSAFG 420
           VFSTM+GEGIKPNIVSYNA+ISAYASHGMD+EA +VFD+MK+SGFRPDV+SYTSLLS FG
Sbjct: 361 VFSTMLGEGIKPNIVSYNALISAYASHGMDKEASTVFDEMKRSGFRPDVVSYTSLLSTFG 420

Query: 421 RSQQPARAREVFDMMKRNKCKPNLVSYNALIDAYGSNGYLAQAVDILREMEQDGIHPNVV 480
           RSQQP RAREVFDMMKRNKCKPNLVSYNALIDAYGSNGYLAQAVDILREMEQDGIHPNVV
Sbjct: 421 RSQQPTRAREVFDMMKRNKCKPNLVSYNALIDAYGSNGYLAQAVDILREMEQDGIHPNVV 480

Query: 481 SICTLLAACGRLGQKVNIDAVLSAAELRGIQLNTISYNSAIGSYMNIGEYEKAINLYRLM 540
           SICTLLAACGR GQKVN+DAV SAAELRGI+LNTI+YNSAIGSYMNIGEYEKA++LYR M
Sbjct: 481 SICTLLAACGRFGQKVNVDAVFSAAELRGIRLNTIAYNSAIGSYMNIGEYEKAVDLYRSM 540

Query: 541 KKESSKPDSVTYTILISSCCRMSKYDEALYFFNEMVDVRIPMSKEVYSSMICAYSKQGQL 600
           K +++KPDSVTYTILISSCCRMSKYDEA++FF EMVD++IP+S+E+YSSMICAYSKQGQL
Sbjct: 541 KNKNTKPDSVTYTILISSCCRMSKYDEAIHFFKEMVDLKIPLSEEIYSSMICAYSKQGQL 600

Query: 601 MKAESLFNSMKGSGCCPDLVTYTAMINAYSASETWEKACALFNEMETNNIELDPIACSAL 660
           +KAE+LFNS+KGSGCCPDLVTYTAMINAYS +ETWEKAC+L++EMETNNI+LD IACSAL
Sbjct: 601 VKAETLFNSLKGSGCCPDLVTYTAMINAYSTTETWEKACSLYHEMETNNIQLDSIACSAL 660

Query: 661 MKAFNKGNQASNVLILAEIMKEKGIPFNDTNFFEMLSACSILRDWSKATDLIKLMEPSLH 720
           MKA+NKGNQASNVL LAEIMKEKGIPFND NFFEMLSACS LRDW KATD+IKLMEPSLH
Sbjct: 661 MKAYNKGNQASNVLTLAEIMKEKGIPFNDANFFEMLSACSTLRDWRKATDIIKLMEPSLH 720

Query: 721 LVSVGTINHLLHFLGKSGKTEIMMKLFYRFVALGSSVNISTYSILLKNLLSAGNWRKYIE 780
           LVSVGTINHLLHFLGKSGK EIMMKLFYRFVALGSSVNISTYSILLKNLLS GNWRKYIE
Sbjct: 721 LVSVGTINHLLHFLGKSGKMEIMMKLFYRFVALGSSVNISTYSILLKNLLSFGNWRKYIE 780

Query: 781 VLQWMDDAGIQPSNAMYKDILYFAQNCGGAECAAVIKGRVESLKR 826
           VLQWMDDAGIQPSNAMY DILYFAQNCGGAECAA+IK RVESLKR
Sbjct: 781 VLQWMDDAGIQPSNAMYNDILYFAQNCGGAECAAIIKERVESLKR 825

[Close]
BLAST of Lcy10g004740 vs. ExPASy TrEMBL
Match: A0A6J1J354 (pentatricopeptide repeat-containing protein At2g41720 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482245 PE=4 SV=1)

HSP 1 Score: 1541.6 bits (3990), Expect = 0.0e+00
Identity = 745/820 (90.85%), Postives = 791/820 (96.46%), Query Frame = 0 

Query: 1   MATLPPHCHYRSSHHHKISHPPDLTGRSLNSTLPKTLVICKNSKNESAFEEKKQVLVDYD 60
           MATLPPHC +R S HHK S+  DLTGRSL+STLPKTL+ICKNSKNESAFEE KQVLVDYD
Sbjct: 1   MATLPPHCPHRPSRHHKFSYTADLTGRSLDSTLPKTLIICKNSKNESAFEETKQVLVDYD 60

Query: 61  HGKHEIRTLVNGFRKLDIPRRYQLRVEGERFQKDWTVSEVVQRILKLQRHGDVEALLNCW 120
           +GKHE+RTLVNG RKLDIPRRYQLRV GERFQKDWTV+EVVQRILKLQRHGDVEALLNCW
Sbjct: 61  NGKHEVRTLVNGLRKLDIPRRYQLRVGGERFQKDWTVTEVVQRILKLQRHGDVEALLNCW 120

Query: 121 VGRFSRKNYPALMKELTQSGSIEHCVQVFDWMKNQRNYCARNDIYNMMIRLHARHNRTDQ 180
           VGRF+RKNYPALMKELTQ+GSIEHCVQVFDWMKNQ+NYCARNDIYNMMIRLHARHNR DQ
Sbjct: 121 VGRFARKNYPALMKELTQNGSIEHCVQVFDWMKNQKNYCARNDIYNMMIRLHARHNRIDQ 180

Query: 181 ARGLFFEMQKWRCKPDAETYNALINAHGRAGQWRWAMNIMEDMLRAAIPPSRSTFNNLIN 240
           ARGLFFEMQKWRCKPDAETYN+LINAHGRAGQWRWAMNI+EDMLRAAIPPSRSTFNNLIN
Sbjct: 181 ARGLFFEMQKWRCKPDAETYNSLINAHGRAGQWRWAMNILEDMLRAAIPPSRSTFNNLIN 240

Query: 241 ACGSCGNWREALRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELMKSTNIRP 300
           ACGS GNWREALRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELMK TNIRP
Sbjct: 241 ACGSSGNWREALRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELMKGTNIRP 300

Query: 301 DTTTLNIVIHCLIKVKQYGQAIEIFNSMREKRAECRPDVVTFTSIIHLYSVCGQIEDCKA 360
           DTTTLNIVIHCLIKVKQYGQAIEIFNSMREKRAECRPDVVTFT+IIHLYSVCGQIEDCKA
Sbjct: 301 DTTTLNIVIHCLIKVKQYGQAIEIFNSMREKRAECRPDVVTFTTIIHLYSVCGQIEDCKA 360

Query: 361 VFSTMVGEGIKPNIVSYNAIISAYASHGMDREAFSVFDDMKKSGFRPDVISYTSLLSAFG 420
           VFSTM+GEGIKPNIVSYNA+ISAYASHGMD+EA +VFD+MK+SGFRPDV+SYTSLLS FG
Sbjct: 361 VFSTMLGEGIKPNIVSYNALISAYASHGMDKEASTVFDEMKRSGFRPDVVSYTSLLSTFG 420

Query: 421 RSQQPARAREVFDMMKRNKCKPNLVSYNALIDAYGSNGYLAQAVDILREMEQDGIHPNVV 480
           RSQQP RAREVFDMMKRNKCKPNLVSYNALIDAYGSNGYLAQAVDILREMEQDGIHPNVV
Sbjct: 421 RSQQPTRAREVFDMMKRNKCKPNLVSYNALIDAYGSNGYLAQAVDILREMEQDGIHPNVV 480

Query: 481 SICTLLAACGRLGQKVNIDAVLSAAELRGIQLNTISYNSAIGSYMNIGEYEKAINLYRLM 540
           SICTLLA+CGR GQKVN+DAVLSAAELRGI+LNTI+YNSAIGSYMNIGEYEKAI+LYR M
Sbjct: 481 SICTLLASCGRFGQKVNVDAVLSAAELRGIRLNTIAYNSAIGSYMNIGEYEKAIDLYRSM 540

Query: 541 KKESSKPDSVTYTILISSCCRMSKYDEALYFFNEMVDVRIPMSKEVYSSMICAYSKQGQL 600
           K +++KPDSVTY ILISSCCRMSKYDEA++FF EMVD++IP+S+E+YSSMICAYSKQGQL
Sbjct: 541 KNKNTKPDSVTYNILISSCCRMSKYDEAIHFFKEMVDLKIPLSEEIYSSMICAYSKQGQL 600

Query: 601 MKAESLFNSMKGSGCCPDLVTYTAMINAYSASETWEKACALFNEMETNNIELDPIACSAL 660
           +KAE+LFNS+KGSGCCPDLVTYTAMINAYS +ETWEKAC+L++EMETNNI+LD IACSAL
Sbjct: 601 VKAETLFNSLKGSGCCPDLVTYTAMINAYSTTETWEKACSLYHEMETNNIQLDSIACSAL 660

Query: 661 MKAFNKGNQASNVLILAEIMKEKGIPFNDTNFFEMLSACSILRDWSKATDLIKLMEPSLH 720
           MKA+NKGNQASNVLILAEIMKEKGIPFND NFFEMLSACS LRDW KATD+IKLMEPSLH
Sbjct: 661 MKAYNKGNQASNVLILAEIMKEKGIPFNDANFFEMLSACSTLRDWRKATDIIKLMEPSLH 720

Query: 721 LVSVGTINHLLHFLGKSGKTEIMMKLFYRFVALGSSVNISTYSILLKNLLSAGNWRKYIE 780
           LVSVGTINHLLHFLGKSGK EIMMKLFYRFVALGSSVNISTYSILLKNLLS GNWRKYIE
Sbjct: 721 LVSVGTINHLLHFLGKSGKMEIMMKLFYRFVALGSSVNISTYSILLKNLLSFGNWRKYIE 780

Query: 781 VLQWMDDAGIQPSNAMYKDILYFAQNCGGAECAAVIKGRV 821
           VLQWMDDAGIQPSNAMY DILYFAQNCGGAECAA+IK RV
Sbjct: 781 VLQWMDDAGIQPSNAMYNDILYFAQNCGGAECAAIIKERV 820

[Close]
BLAST of Lcy10g004740 vs. ExPASy TrEMBL
Match: A0A6J1J8H8 (pentatricopeptide repeat-containing protein At2g41720 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111482245 PE=4 SV=1)

HSP 1 Score: 1541.6 bits (3990), Expect = 0.0e+00
Identity = 745/820 (90.85%), Postives = 791/820 (96.46%), Query Frame = 0 

Query: 1   MATLPPHCHYRSSHHHKISHPPDLTGRSLNSTLPKTLVICKNSKNESAFEEKKQVLVDYD 60
           MATLPPHC +R S HHK S+  DLTGRSL+STLPKTL+ICKNSKNESAFEE KQVLVDYD
Sbjct: 1   MATLPPHCPHRPSRHHKFSYTADLTGRSLDSTLPKTLIICKNSKNESAFEETKQVLVDYD 60

Query: 61  HGKHEIRTLVNGFRKLDIPRRYQLRVEGERFQKDWTVSEVVQRILKLQRHGDVEALLNCW 120
           +GKHE+RTLVNG RKLDIPRRYQLRV GERFQKDWTV+EVVQRILKLQRHGDVEALLNCW
Sbjct: 61  NGKHEVRTLVNGLRKLDIPRRYQLRVGGERFQKDWTVTEVVQRILKLQRHGDVEALLNCW 120

Query: 121 VGRFSRKNYPALMKELTQSGSIEHCVQVFDWMKNQRNYCARNDIYNMMIRLHARHNRTDQ 180
           VGRF+RKNYPALMKELTQ+GSIEHCVQVFDWMKNQ+NYCARNDIYNMMIRLHARHNR DQ
Sbjct: 121 VGRFARKNYPALMKELTQNGSIEHCVQVFDWMKNQKNYCARNDIYNMMIRLHARHNRIDQ 180

Query: 181 ARGLFFEMQKWRCKPDAETYNALINAHGRAGQWRWAMNIMEDMLRAAIPPSRSTFNNLIN 240
           ARGLFFEMQKWRCKPDAETYN+LINAHGRAGQWRWAMNI+EDMLRAAIPPSRSTFNNLIN
Sbjct: 181 ARGLFFEMQKWRCKPDAETYNSLINAHGRAGQWRWAMNILEDMLRAAIPPSRSTFNNLIN 240

Query: 241 ACGSCGNWREALRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELMKSTNIRP 300
           ACGS GNWREALRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELMK TNIRP
Sbjct: 241 ACGSSGNWREALRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELMKGTNIRP 300

Query: 301 DTTTLNIVIHCLIKVKQYGQAIEIFNSMREKRAECRPDVVTFTSIIHLYSVCGQIEDCKA 360
           DTTTLNIVIHCLIKVKQYGQAIEIFNSMREKRAECRPDVVTFT+IIHLYSVCGQIEDCKA
Sbjct: 301 DTTTLNIVIHCLIKVKQYGQAIEIFNSMREKRAECRPDVVTFTTIIHLYSVCGQIEDCKA 360

Query: 361 VFSTMVGEGIKPNIVSYNAIISAYASHGMDREAFSVFDDMKKSGFRPDVISYTSLLSAFG 420
           VFSTM+GEGIKPNIVSYNA+ISAYASHGMD+EA +VFD+MK+SGFRPDV+SYTSLLS FG
Sbjct: 361 VFSTMLGEGIKPNIVSYNALISAYASHGMDKEASTVFDEMKRSGFRPDVVSYTSLLSTFG 420

Query: 421 RSQQPARAREVFDMMKRNKCKPNLVSYNALIDAYGSNGYLAQAVDILREMEQDGIHPNVV 480
           RSQQP RAREVFDMMKRNKCKPNLVSYNALIDAYGSNGYLAQAVDILREMEQDGIHPNVV
Sbjct: 421 RSQQPTRAREVFDMMKRNKCKPNLVSYNALIDAYGSNGYLAQAVDILREMEQDGIHPNVV 480

Query: 481 SICTLLAACGRLGQKVNIDAVLSAAELRGIQLNTISYNSAIGSYMNIGEYEKAINLYRLM 540
           SICTLLA+CGR GQKVN+DAVLSAAELRGI+LNTI+YNSAIGSYMNIGEYEKAI+LYR M
Sbjct: 481 SICTLLASCGRFGQKVNVDAVLSAAELRGIRLNTIAYNSAIGSYMNIGEYEKAIDLYRSM 540

Query: 541 KKESSKPDSVTYTILISSCCRMSKYDEALYFFNEMVDVRIPMSKEVYSSMICAYSKQGQL 600
           K +++KPDSVTY ILISSCCRMSKYDEA++FF EMVD++IP+S+E+YSSMICAYSKQGQL
Sbjct: 541 KNKNTKPDSVTYNILISSCCRMSKYDEAIHFFKEMVDLKIPLSEEIYSSMICAYSKQGQL 600

Query: 601 MKAESLFNSMKGSGCCPDLVTYTAMINAYSASETWEKACALFNEMETNNIELDPIACSAL 660
           +KAE+LFNS+KGSGCCPDLVTYTAMINAYS +ETWEKAC+L++EMETNNI+LD IACSAL
Sbjct: 601 VKAETLFNSLKGSGCCPDLVTYTAMINAYSTTETWEKACSLYHEMETNNIQLDSIACSAL 660

Query: 661 MKAFNKGNQASNVLILAEIMKEKGIPFNDTNFFEMLSACSILRDWSKATDLIKLMEPSLH 720
           MKA+NKGNQASNVLILAEIMKEKGIPFND NFFEMLSACS LRDW KATD+IKLMEPSLH
Sbjct: 661 MKAYNKGNQASNVLILAEIMKEKGIPFNDANFFEMLSACSTLRDWRKATDIIKLMEPSLH 720

Query: 721 LVSVGTINHLLHFLGKSGKTEIMMKLFYRFVALGSSVNISTYSILLKNLLSAGNWRKYIE 780
           LVSVGTINHLLHFLGKSGK EIMMKLFYRFVALGSSVNISTYSILLKNLLS GNWRKYIE
Sbjct: 721 LVSVGTINHLLHFLGKSGKMEIMMKLFYRFVALGSSVNISTYSILLKNLLSFGNWRKYIE 780

Query: 781 VLQWMDDAGIQPSNAMYKDILYFAQNCGGAECAAVIKGRV 821
           VLQWMDDAGIQPSNAMY DILYFAQNCGGAECAA+IK RV
Sbjct: 781 VLQWMDDAGIQPSNAMYNDILYFAQNCGGAECAAIIKERV 820

[Close]
BLAST of Lcy10g004740 vs. ExPASy TrEMBL
Match: A0A6J1DRE7 (pentatricopeptide repeat-containing protein At2g41720 OS=Momordica charantia OX=3673 GN=LOC111023661 PE=4 SV=1)

HSP 1 Score: 1538.9 bits (3983), Expect = 0.0e+00
Identity = 749/825 (90.79%), Postives = 790/825 (95.76%), Query Frame = 0 

Query: 1   MATLPPHCHYRSSHHHKISHPPDLTGRSLNSTLPKTLVICKNSKNESAFEEKKQVLVDYD 60
           MATL PHCHYR SHH +IS P DL+GRS NSTL K+L+ICKNS NESAF EKKQVLVDY+
Sbjct: 1   MATLSPHCHYRPSHHRRISQPTDLSGRSFNSTLQKSLIICKNSNNESAFAEKKQVLVDYN 60

Query: 61  HGKHEIRTLVNGFRKLDIPRRYQLRVEGERFQKDWTVSEVVQRILKLQRHGDVEALLNCW 120
           +GKHEIRTLVNG RK+DIPRRYQLRVEGERFQKDWTV+EVVQRILKLQ H DVEALLNCW
Sbjct: 61  NGKHEIRTLVNGLRKVDIPRRYQLRVEGERFQKDWTVTEVVQRILKLQNHSDVEALLNCW 120

Query: 121 VGRFSRKNYPALMKELTQSGSIEHCVQVFDWMKNQRNYCARNDIYNMMIRLHARHNRTDQ 180
           VGRF+RKNYPALMKELTQSGSIEHCVQVF WMKNQ+NYCARNDIYNMMIRLHARHNRTDQ
Sbjct: 121 VGRFARKNYPALMKELTQSGSIEHCVQVFVWMKNQQNYCARNDIYNMMIRLHARHNRTDQ 180

Query: 181 ARGLFFEMQKWRCKPDAETYNALINAHGRAGQWRWAMNIMEDMLRAAIPPSRSTFNNLIN 240
           ARGLFFEM+KWRCKPDAETYNALINAHGRAGQWRWAMNIMEDMLRAAIPPSRSTFNNLIN
Sbjct: 181 ARGLFFEMEKWRCKPDAETYNALINAHGRAGQWRWAMNIMEDMLRAAIPPSRSTFNNLIN 240

Query: 241 ACGSCGNWREALRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELMKSTNIRP 300
           ACGSCGNWREALRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELMK T IRP
Sbjct: 241 ACGSCGNWREALRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELMKGTKIRP 300

Query: 301 DTTTLNIVIHCLIKVKQYGQAIEIFNSMREKRAECRPDVVTFTSIIHLYSVCGQIEDCKA 360
           DTTTLNIVIHCLIKVK+YGQAIEIFNSMREKRAEC PDVVTFTSIIHLYSVCGQIEDCKA
Sbjct: 301 DTTTLNIVIHCLIKVKKYGQAIEIFNSMREKRAECHPDVVTFTSIIHLYSVCGQIEDCKA 360

Query: 361 VFSTMVGEGIKPNIVSYNAIISAYASHGMDREAFSVFDDMKKSGFRPDVISYTSLLSAFG 420
            F+TM+GEGIKPNIVSYNA+ISAYASHGMD+EAF VFD+MK+SGFRPDV+SYTSLLSAFG
Sbjct: 361 AFNTMLGEGIKPNIVSYNALISAYASHGMDKEAFLVFDEMKRSGFRPDVVSYTSLLSAFG 420

Query: 421 RSQQPARAREVFDMMKRNKCKPNLVSYNALIDAYGSNGYLAQAVDILREMEQDGIHPNVV 480
           RSQQPARAREVFDMMKRN CKPN+V+YNALIDAYG NGYL +A+DILREMEQDGI PNVV
Sbjct: 421 RSQQPARAREVFDMMKRNNCKPNIVTYNALIDAYGCNGYLTKAIDILREMEQDGIQPNVV 480

Query: 481 SICTLLAACGRLGQKVNIDAVLSAAELRGIQLNTISYNSAIGSYMNIGEYEKAINLYRLM 540
           SICTLLAACGR GQKVNIDAVLSAA+LRGI LNTI+YNSAIGSYMNIGEYEKAINLY+ M
Sbjct: 481 SICTLLAACGRCGQKVNIDAVLSAAKLRGIPLNTIAYNSAIGSYMNIGEYEKAINLYKSM 540

Query: 541 KKESSKPDSVTYTILISSCCRMSKYDEALYFFNEMVDVRIPMSKEVYSSMICAYSKQGQL 600
           KK ++KPD VTYTILISSC RMS+YDEALYFF EMVD+RIP+SKE+YSSMICAYSKQGQL
Sbjct: 541 KKMNTKPDCVTYTILISSCSRMSRYDEALYFFKEMVDLRIPLSKEIYSSMICAYSKQGQL 600

Query: 601 MKAESLFNSMKGSGCCPDLVTYTAMINAYSASETWEKACALFNEMETNNIELDPIACSAL 660
           +KAES+FNSMKGSGCC DLVTYTAMINAYSASE WEKACALF+EMETNNIELD IACSAL
Sbjct: 601 VKAESMFNSMKGSGCCTDLVTYTAMINAYSASENWEKACALFHEMETNNIELDHIACSAL 660

Query: 661 MKAFNKGNQASNVLILAEIMKEKGIPFNDTNFFEMLSACSILRDWSKATDLIKLMEPSLH 720
           MKAF+KGNQASNVLILA+IMKEKGIPFND NFF+MLSACSILRDW KATDLIKLMEPSLH
Sbjct: 661 MKAFSKGNQASNVLILADIMKEKGIPFNDANFFDMLSACSILRDWRKATDLIKLMEPSLH 720

Query: 721 LVSVGTINHLLHFLGKSGKTEIMMKLFYRFVALGSSVNISTYSILLKNLLSAGNWRKYIE 780
           LVSVGTINHLL+FLGKSGKTEIMMKLFYRF+ALGSSVNI+TYSILLKNLLSAGNWRKYIE
Sbjct: 721 LVSVGTINHLLNFLGKSGKTEIMMKLFYRFMALGSSVNINTYSILLKNLLSAGNWRKYIE 780

Query: 781 VLQWMDDAGIQPSNAMYKDILYFAQNCGGAECAAVIKGRVESLKR 826
           VLQWMDDAGIQPSNAMYKDILYFAQNCGGAECAAVIK RVESLKR
Sbjct: 781 VLQWMDDAGIQPSNAMYKDILYFAQNCGGAECAAVIKERVESLKR 825

[Close]
BLAST of Lcy10g004740 vs. NCBI nr
Match: XP_023526156.1 (pentatricopeptide repeat-containing protein At2g41720 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1553.1 bits (4020), Expect = 0.0e+00
Identity = 749/825 (90.79%), Postives = 796/825 (96.48%), Query Frame = 0 

Query: 1   MATLPPHCHYRSSHHHKISHPPDLTGRSLNSTLPKTLVICKNSKNESAFEEKKQVLVDYD 60
           MATLPPHC++  SHHHK S+P DLTGRS++ST PKTL+ICKNSKNESAFEE KQVLVDYD
Sbjct: 1   MATLPPHCYHSPSHHHKFSYPADLTGRSVDSTFPKTLIICKNSKNESAFEETKQVLVDYD 60

Query: 61  HGKHEIRTLVNGFRKLDIPRRYQLRVEGERFQKDWTVSEVVQRILKLQRHGDVEALLNCW 120
           +GKHE+RTLVNG RKLDIPRRYQLRV GERFQKDWTV+EVVQRILKLQRHGDVEALLNCW
Sbjct: 61  NGKHEVRTLVNGLRKLDIPRRYQLRVGGERFQKDWTVTEVVQRILKLQRHGDVEALLNCW 120

Query: 121 VGRFSRKNYPALMKELTQSGSIEHCVQVFDWMKNQRNYCARNDIYNMMIRLHARHNRTDQ 180
           VGRF+RKNYPALMKELTQ+GSIEHCVQVFDWMKNQ+NYCARNDIYNMMIRLHARHNR DQ
Sbjct: 121 VGRFARKNYPALMKELTQNGSIEHCVQVFDWMKNQKNYCARNDIYNMMIRLHARHNRIDQ 180

Query: 181 ARGLFFEMQKWRCKPDAETYNALINAHGRAGQWRWAMNIMEDMLRAAIPPSRSTFNNLIN 240
           ARGLFFEMQKWRCKPDAETYN+LINAHGRAGQWRWAMNIMEDMLRAAIPPSRSTFNNLIN
Sbjct: 181 ARGLFFEMQKWRCKPDAETYNSLINAHGRAGQWRWAMNIMEDMLRAAIPPSRSTFNNLIN 240

Query: 241 ACGSCGNWREALRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELMKSTNIRP 300
           ACGS GNWREALRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELMK TNIRP
Sbjct: 241 ACGSSGNWREALRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELMKGTNIRP 300

Query: 301 DTTTLNIVIHCLIKVKQYGQAIEIFNSMREKRAECRPDVVTFTSIIHLYSVCGQIEDCKA 360
           DTTTLNIVIHCLIKVKQYGQAIEIFNSMREKRAECRPDVVTFTSIIHLYSVCGQIEDCKA
Sbjct: 301 DTTTLNIVIHCLIKVKQYGQAIEIFNSMREKRAECRPDVVTFTSIIHLYSVCGQIEDCKA 360

Query: 361 VFSTMVGEGIKPNIVSYNAIISAYASHGMDREAFSVFDDMKKSGFRPDVISYTSLLSAFG 420
           VFSTM+GEGIKP IVSYNA+ISAYASHGMD+EA +VFD+MK+SGFRPDV+SYTSLLS FG
Sbjct: 361 VFSTMLGEGIKPTIVSYNALISAYASHGMDKEASTVFDEMKRSGFRPDVVSYTSLLSTFG 420

Query: 421 RSQQPARAREVFDMMKRNKCKPNLVSYNALIDAYGSNGYLAQAVDILREMEQDGIHPNVV 480
           RSQQP RAREVFDMMKRNKCKPNLVSYNALIDAYGSNGYLAQAVDILREMEQDGIHPNVV
Sbjct: 421 RSQQPTRAREVFDMMKRNKCKPNLVSYNALIDAYGSNGYLAQAVDILREMEQDGIHPNVV 480

Query: 481 SICTLLAACGRLGQKVNIDAVLSAAELRGIQLNTISYNSAIGSYMNIGEYEKAINLYRLM 540
           SICTLLAACGR GQKVN+DAVLSAAELRGI+LNTI+YNSAIGSYMNIGEYEKA++LYR M
Sbjct: 481 SICTLLAACGRFGQKVNVDAVLSAAELRGIRLNTIAYNSAIGSYMNIGEYEKAVDLYRSM 540

Query: 541 KKESSKPDSVTYTILISSCCRMSKYDEALYFFNEMVDVRIPMSKEVYSSMICAYSKQGQL 600
           K +++KPDSVTYTILISSCCRMSKYDEA++FF EMVD++IP+S+E+YSSMICAYSKQGQL
Sbjct: 541 KNKNTKPDSVTYTILISSCCRMSKYDEAIHFFKEMVDLKIPLSEEIYSSMICAYSKQGQL 600

Query: 601 MKAESLFNSMKGSGCCPDLVTYTAMINAYSASETWEKACALFNEMETNNIELDPIACSAL 660
           +KAE+LFNS+KGSGCCPDLVTYTAMINAYS +ETWEKAC+L++EMETNNI+LD IACSAL
Sbjct: 601 VKAETLFNSLKGSGCCPDLVTYTAMINAYSTTETWEKACSLYHEMETNNIQLDSIACSAL 660

Query: 661 MKAFNKGNQASNVLILAEIMKEKGIPFNDTNFFEMLSACSILRDWSKATDLIKLMEPSLH 720
           MKA+NKGNQASNVL LAEIMKEKGIPFND NFFEMLSACS LRDW KATD+IKLMEPSLH
Sbjct: 661 MKAYNKGNQASNVLTLAEIMKEKGIPFNDANFFEMLSACSTLRDWRKATDIIKLMEPSLH 720

Query: 721 LVSVGTINHLLHFLGKSGKTEIMMKLFYRFVALGSSVNISTYSILLKNLLSAGNWRKYIE 780
           LVSVGTINHLLHFLGKSGK EIMMKLFYRF+ALGSSVNISTYSILLKNLLS GNWRKYIE
Sbjct: 721 LVSVGTINHLLHFLGKSGKMEIMMKLFYRFMALGSSVNISTYSILLKNLLSFGNWRKYIE 780

Query: 781 VLQWMDDAGIQPSNAMYKDILYFAQNCGGAECAAVIKGRVESLKR 826
           VLQWMDDAGIQPSNAMY DILYFAQNCGGAECAA+IK RVESLKR
Sbjct: 781 VLQWMDDAGIQPSNAMYNDILYFAQNCGGAECAAIIKERVESLKR 825

[Close]
BLAST of Lcy10g004740 vs. NCBI nr
Match: XP_038903756.1 (pentatricopeptide repeat-containing protein At2g41720 isoform X2 [Benincasa hispida])

HSP 1 Score: 1551.2 bits (4015), Expect = 0.0e+00
Identity = 759/826 (91.89%), Postives = 795/826 (96.25%), Query Frame = 0 

Query: 1   MATLPPHCHYRSSHHHKISHPPDLTGRSLNST-LPKTLVICKNSKNESAFEEKKQVLVDY 60
           MA+LPPHCHY SSHHHKIS+P DL G SLNST LPKTL+ICKNSK+ESAFEE+KQVLVDY
Sbjct: 1   MASLPPHCHYCSSHHHKISYPADLIGWSLNSTLLPKTLIICKNSKSESAFEERKQVLVDY 60

Query: 61  DHGKHEIRTLVNGFRKLDIPRRYQLRVEGERFQKDWTVSEVVQRILKLQRHGDVEALLNC 120
           D+GKHEIRTLVNG RKLDIPRRYQLRVEGERFQKDWTV+EVVQRILKLQRHGDVEALLNC
Sbjct: 61  DNGKHEIRTLVNGLRKLDIPRRYQLRVEGERFQKDWTVTEVVQRILKLQRHGDVEALLNC 120

Query: 121 WVGRFSRKNYPALMKELTQSGSIEHCVQVFDWMKNQRNYCARNDIYNMMIRLHARHNRTD 180
           WVGRFSRKNYPALMKELTQ+GSIEHCVQVFDWMKNQRNYCARNDIYNMMIRLHARHNR D
Sbjct: 121 WVGRFSRKNYPALMKELTQNGSIEHCVQVFDWMKNQRNYCARNDIYNMMIRLHARHNRID 180

Query: 181 QARGLFFEMQKWRCKPDAETYNALINAHGRAGQWRWAMNIMEDMLRAAIPPSRSTFNNLI 240
           QARGLFFEMQKWRCKPD ETYNALINAHGRAGQWRWAMNIM+DMLRAAIPPSRSTFNNLI
Sbjct: 181 QARGLFFEMQKWRCKPDVETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTFNNLI 240

Query: 241 NACGSCGNWREALRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELMKSTNIR 300
           NACGSCGNWREALRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELMK TNIR
Sbjct: 241 NACGSCGNWREALRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELMKGTNIR 300

Query: 301 PDTTTLNIVIHCLIKVKQYGQAIEIFNSMREKRAECRPDVVTFTSIIHLYSVCGQIEDCK 360
           PDTTTLNIVIHCLIKVKQYGQAIEIF+SMREKRAECRPDVVTFTSIIHLYSVCGQIEDCK
Sbjct: 301 PDTTTLNIVIHCLIKVKQYGQAIEIFSSMREKRAECRPDVVTFTSIIHLYSVCGQIEDCK 360

Query: 361 AVFSTMVGEGIKPNIVSYNAIISAYASHGMDREAFSVFDDMKKSGFRPDVISYTSLLSAF 420
           AVFS M+GEGI+PNIVSYNA+ISAYASHGMD+EAFSVFD+MK+SGFRPDVISYTSLLS F
Sbjct: 361 AVFSAMLGEGIEPNIVSYNALISAYASHGMDKEAFSVFDEMKRSGFRPDVISYTSLLSTF 420

Query: 421 GRSQQPARAREVFDMMKRNKCKPNLVSYNALIDAYGSNGYLAQAVDILREMEQDGIHPNV 480
           GRSQQPARAREVFDMMKRNKCKPNLVSYNALIDAYGSNGYL QAVDILREMEQDGIHPNV
Sbjct: 421 GRSQQPARAREVFDMMKRNKCKPNLVSYNALIDAYGSNGYLPQAVDILREMEQDGIHPNV 480

Query: 481 VSICTLLAACGRLGQKVNIDAVLSAAELRGIQLNTISYNSAIGSYMNIGEYEKAINLYRL 540
           VSICTLLAACGR GQKVNID+VLSAAELRGI LNTI+YNSAIGSYMNIGEYEKAINLYR 
Sbjct: 481 VSICTLLAACGRFGQKVNIDSVLSAAELRGIHLNTIAYNSAIGSYMNIGEYEKAINLYRS 540

Query: 541 MKKESSKPDSVTYTILISSCCRMSKYDEALYFFNEMVDVRIPMSKEVYSSMICAYSKQGQ 600
           MK +++KPDSVTYTILISSCCRMSKY+EAL FF EMVD+RIP+SKE+YSSMICAYSKQGQ
Sbjct: 541 MKNKNTKPDSVTYTILISSCCRMSKYEEALCFFEEMVDLRIPLSKEIYSSMICAYSKQGQ 600

Query: 601 LMKAESLFNSMKGSGCCPDLVTYTAMINAYSASETWEKACALFNEMETNNIELDPIACSA 660
           L+KAESLFNS+KG+GCCPDLVTYTAMINAYSASETWE+ACAL++EMETNNI+LD IACSA
Sbjct: 601 LVKAESLFNSLKGNGCCPDLVTYTAMINAYSASETWEQACALYHEMETNNIQLDSIACSA 660

Query: 661 LMKAFNKGNQASNVLILAEIMKEKGIPFNDTNFFEMLSACSILRDWSKATDLIKLMEPSL 720
           LMKAFNKGNQASNVLILAEIMKEKGIPFND N FEMLSACSILRDW KATDLI LMEPS 
Sbjct: 661 LMKAFNKGNQASNVLILAEIMKEKGIPFNDANLFEMLSACSILRDWRKATDLINLMEPSF 720

Query: 721 HLVSVGTINHLLHFLGKSGKTEIMMKLFYRFVALGSSVNISTYSILLKNLLSAGNWRKYI 780
           HLVS+GTINHLL FLGKSGKTEIMMKLFYRFVALGSSVNISTYSILLKNLLSAG WRKYI
Sbjct: 721 HLVSLGTINHLLQFLGKSGKTEIMMKLFYRFVALGSSVNISTYSILLKNLLSAGKWRKYI 780

Query: 781 EVLQWMDDAGIQPSNAMYKDILYFAQNCGGAECAAVIKGRVESLKR 826
           EVLQWM+DAGI+PS AMY DIL FA NCGGAECAAVIK RVESL+R
Sbjct: 781 EVLQWMNDAGIKPSVAMYNDILNFAHNCGGAECAAVIKERVESLRR 826

[Close]
BLAST of Lcy10g004740 vs. NCBI nr
Match: XP_023526155.1 (pentatricopeptide repeat-containing protein At2g41720 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1551.2 bits (4015), Expect = 0.0e+00
Identity = 748/825 (90.67%), Postives = 796/825 (96.48%), Query Frame = 0 

Query: 1   MATLPPHCHYRSSHHHKISHPPDLTGRSLNSTLPKTLVICKNSKNESAFEEKKQVLVDYD 60
           MATLPPHC++  SHHHK S+P DLTGRS++ST PKTL+ICKNSKNESAFEE KQVLVDYD
Sbjct: 1   MATLPPHCYHSPSHHHKFSYPADLTGRSVDSTFPKTLIICKNSKNESAFEETKQVLVDYD 60

Query: 61  HGKHEIRTLVNGFRKLDIPRRYQLRVEGERFQKDWTVSEVVQRILKLQRHGDVEALLNCW 120
           +GKHE+RTLVNG RKLDIPRRYQLRV GERFQKDWTV+EVVQRILKLQRHGDVEALLNCW
Sbjct: 61  NGKHEVRTLVNGLRKLDIPRRYQLRVGGERFQKDWTVTEVVQRILKLQRHGDVEALLNCW 120

Query: 121 VGRFSRKNYPALMKELTQSGSIEHCVQVFDWMKNQRNYCARNDIYNMMIRLHARHNRTDQ 180
           VGRF+RKNYPALMKELTQ+GSIEHCVQVFDWMKNQ+NYCARNDIYNMMIRLHARHNR DQ
Sbjct: 121 VGRFARKNYPALMKELTQNGSIEHCVQVFDWMKNQKNYCARNDIYNMMIRLHARHNRIDQ 180

Query: 181 ARGLFFEMQKWRCKPDAETYNALINAHGRAGQWRWAMNIMEDMLRAAIPPSRSTFNNLIN 240
           ARGLFFEMQKWRCKPDAETYN+LINAHGRAGQWRWAMNIMEDMLRAAIPPSRSTFNNLIN
Sbjct: 181 ARGLFFEMQKWRCKPDAETYNSLINAHGRAGQWRWAMNIMEDMLRAAIPPSRSTFNNLIN 240

Query: 241 ACGSCGNWREALRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELMKSTNIRP 300
           ACGS GNWREALRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELMK TNIRP
Sbjct: 241 ACGSSGNWREALRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELMKGTNIRP 300

Query: 301 DTTTLNIVIHCLIKVKQYGQAIEIFNSMREKRAECRPDVVTFTSIIHLYSVCGQIEDCKA 360
           DTTTLNIVIHCLIKVKQYGQAIEIF+SMREKRAECRPDVVTFTSIIHLYSVCGQIEDCKA
Sbjct: 301 DTTTLNIVIHCLIKVKQYGQAIEIFSSMREKRAECRPDVVTFTSIIHLYSVCGQIEDCKA 360

Query: 361 VFSTMVGEGIKPNIVSYNAIISAYASHGMDREAFSVFDDMKKSGFRPDVISYTSLLSAFG 420
           VFSTM+GEGIKP IVSYNA+ISAYASHGMD+EA +VFD+MK+SGFRPDV+SYTSLLS FG
Sbjct: 361 VFSTMLGEGIKPTIVSYNALISAYASHGMDKEASTVFDEMKRSGFRPDVVSYTSLLSTFG 420

Query: 421 RSQQPARAREVFDMMKRNKCKPNLVSYNALIDAYGSNGYLAQAVDILREMEQDGIHPNVV 480
           RSQQP RAREVFDMMKRNKCKPNLVSYNALIDAYGSNGYLAQAVDILREMEQDGIHPNVV
Sbjct: 421 RSQQPTRAREVFDMMKRNKCKPNLVSYNALIDAYGSNGYLAQAVDILREMEQDGIHPNVV 480

Query: 481 SICTLLAACGRLGQKVNIDAVLSAAELRGIQLNTISYNSAIGSYMNIGEYEKAINLYRLM 540
           SICTLLAACGR GQKVN+DAVLSAAELRGI+LNTI+YNSAIGSYMNIGEYEKA++LYR M
Sbjct: 481 SICTLLAACGRFGQKVNVDAVLSAAELRGIRLNTIAYNSAIGSYMNIGEYEKAVDLYRSM 540

Query: 541 KKESSKPDSVTYTILISSCCRMSKYDEALYFFNEMVDVRIPMSKEVYSSMICAYSKQGQL 600
           K +++KPDSVTYTILISSCCRMSKYDEA++FF EMVD++IP+S+E+YSSMICAYSKQGQL
Sbjct: 541 KNKNTKPDSVTYTILISSCCRMSKYDEAIHFFKEMVDLKIPLSEEIYSSMICAYSKQGQL 600

Query: 601 MKAESLFNSMKGSGCCPDLVTYTAMINAYSASETWEKACALFNEMETNNIELDPIACSAL 660
           +KAE+LFNS+KGSGCCPDLVTYTAMINAYS +ETWEKAC+L++EMETNNI+LD IACSAL
Sbjct: 601 VKAETLFNSLKGSGCCPDLVTYTAMINAYSTTETWEKACSLYHEMETNNIQLDSIACSAL 660

Query: 661 MKAFNKGNQASNVLILAEIMKEKGIPFNDTNFFEMLSACSILRDWSKATDLIKLMEPSLH 720
           MKA+NKGNQASNVL LAEIMKEKGIPFND NFFEMLSACS LRDW KATD+IKLMEPSLH
Sbjct: 661 MKAYNKGNQASNVLTLAEIMKEKGIPFNDANFFEMLSACSTLRDWRKATDIIKLMEPSLH 720

Query: 721 LVSVGTINHLLHFLGKSGKTEIMMKLFYRFVALGSSVNISTYSILLKNLLSAGNWRKYIE 780
           LVSVGTINHLLHFLGKSGK EIMMKLFYRF+ALGSSVNISTYSILLKNLLS GNWRKYIE
Sbjct: 721 LVSVGTINHLLHFLGKSGKMEIMMKLFYRFMALGSSVNISTYSILLKNLLSFGNWRKYIE 780

Query: 781 VLQWMDDAGIQPSNAMYKDILYFAQNCGGAECAAVIKGRVESLKR 826
           VLQWMDDAGIQPSNAMY DILYFAQNCGGAECAA+IK RVESLKR
Sbjct: 781 VLQWMDDAGIQPSNAMYNDILYFAQNCGGAECAAIIKERVESLKR 825

[Close]
BLAST of Lcy10g004740 vs. NCBI nr
Match: KAG6580916.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1550.8 bits (4014), Expect = 0.0e+00
Identity = 749/825 (90.79%), Postives = 794/825 (96.24%), Query Frame = 0 

Query: 1   MATLPPHCHYRSSHHHKISHPPDLTGRSLNSTLPKTLVICKNSKNESAFEEKKQVLVDYD 60
           MATL PHCH+R SH HK S+P DLTGRS +STLP TL+ICKNSKNESAFEE KQVLVDYD
Sbjct: 1   MATLLPHCHHRPSHQHKFSYPADLTGRSSDSTLPTTLIICKNSKNESAFEETKQVLVDYD 60

Query: 61  HGKHEIRTLVNGFRKLDIPRRYQLRVEGERFQKDWTVSEVVQRILKLQRHGDVEALLNCW 120
           +GKHE+RTLVNG RKLDIPRRYQLRV GERFQKDWTV+EVVQRILKLQRHGDVEALLNCW
Sbjct: 61  NGKHEVRTLVNGLRKLDIPRRYQLRVGGERFQKDWTVTEVVQRILKLQRHGDVEALLNCW 120

Query: 121 VGRFSRKNYPALMKELTQSGSIEHCVQVFDWMKNQRNYCARNDIYNMMIRLHARHNRTDQ 180
           VGRF+RKNYPALMKELTQ+GSIEHC+QVFDWMKNQ+NYCARNDIYNMMIRLHARHNR DQ
Sbjct: 121 VGRFARKNYPALMKELTQNGSIEHCIQVFDWMKNQKNYCARNDIYNMMIRLHARHNRIDQ 180

Query: 181 ARGLFFEMQKWRCKPDAETYNALINAHGRAGQWRWAMNIMEDMLRAAIPPSRSTFNNLIN 240
           ARGLFFEMQKWRCKPDAETYN+LINAHGRAGQWRWAMNIMEDMLRAAIPPSRSTFNNLIN
Sbjct: 181 ARGLFFEMQKWRCKPDAETYNSLINAHGRAGQWRWAMNIMEDMLRAAIPPSRSTFNNLIN 240

Query: 241 ACGSCGNWREALRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELMKSTNIRP 300
           ACGS GNWREALRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELMK TNIRP
Sbjct: 241 ACGSSGNWREALRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELMKGTNIRP 300

Query: 301 DTTTLNIVIHCLIKVKQYGQAIEIFNSMREKRAECRPDVVTFTSIIHLYSVCGQIEDCKA 360
           DTTTLNIVIHCLIKVKQYGQAIEIFNSMREKRAECRPDVVTFTSIIHLYSVCGQIEDCKA
Sbjct: 301 DTTTLNIVIHCLIKVKQYGQAIEIFNSMREKRAECRPDVVTFTSIIHLYSVCGQIEDCKA 360

Query: 361 VFSTMVGEGIKPNIVSYNAIISAYASHGMDREAFSVFDDMKKSGFRPDVISYTSLLSAFG 420
           VFSTM+GEGIKPNIVSYNA+ISAYASHGMD+EA +VFD+MK+SGFRPDV+SYTSLLS FG
Sbjct: 361 VFSTMLGEGIKPNIVSYNALISAYASHGMDKEASTVFDEMKRSGFRPDVVSYTSLLSTFG 420

Query: 421 RSQQPARAREVFDMMKRNKCKPNLVSYNALIDAYGSNGYLAQAVDILREMEQDGIHPNVV 480
           RSQQP RAREVFDMMKRNKCKPNLVSYNALIDAYGSNGYLAQAVDILREMEQDGIHPNVV
Sbjct: 421 RSQQPTRAREVFDMMKRNKCKPNLVSYNALIDAYGSNGYLAQAVDILREMEQDGIHPNVV 480

Query: 481 SICTLLAACGRLGQKVNIDAVLSAAELRGIQLNTISYNSAIGSYMNIGEYEKAINLYRLM 540
           SICTLLAACGR GQKVN+DAV+SAAELRGI+LNTI+YNSAIGSYMNIGEYEKA++LYR M
Sbjct: 481 SICTLLAACGRFGQKVNVDAVISAAELRGIRLNTIAYNSAIGSYMNIGEYEKAVDLYRSM 540

Query: 541 KKESSKPDSVTYTILISSCCRMSKYDEALYFFNEMVDVRIPMSKEVYSSMICAYSKQGQL 600
           K +++KPDSVTYTILISSCCRMSKYDEA++FF EMVD++IP+S+E+YSSMICAYSKQGQL
Sbjct: 541 KNKNTKPDSVTYTILISSCCRMSKYDEAIHFFKEMVDLKIPLSEEIYSSMICAYSKQGQL 600

Query: 601 MKAESLFNSMKGSGCCPDLVTYTAMINAYSASETWEKACALFNEMETNNIELDPIACSAL 660
           +KAE+LFNS+KGSGCCPDLVTYTAMINAYS +ETWEKAC+L+ EMETNNI+LD IACSAL
Sbjct: 601 VKAETLFNSLKGSGCCPDLVTYTAMINAYSTTETWEKACSLYREMETNNIQLDSIACSAL 660

Query: 661 MKAFNKGNQASNVLILAEIMKEKGIPFNDTNFFEMLSACSILRDWSKATDLIKLMEPSLH 720
           MKA+NKGNQASNVL LAEIMKEKGIPFND NFFEMLSACS LRDW KATD+IKLMEPSLH
Sbjct: 661 MKAYNKGNQASNVLTLAEIMKEKGIPFNDANFFEMLSACSTLRDWRKATDIIKLMEPSLH 720

Query: 721 LVSVGTINHLLHFLGKSGKTEIMMKLFYRFVALGSSVNISTYSILLKNLLSAGNWRKYIE 780
           LVSVGTINHLLHFLGKSGK EIMMKLFYRFVALGSSVNISTYSILLKNLLS GNWRKYIE
Sbjct: 721 LVSVGTINHLLHFLGKSGKMEIMMKLFYRFVALGSSVNISTYSILLKNLLSFGNWRKYIE 780

Query: 781 VLQWMDDAGIQPSNAMYKDILYFAQNCGGAECAAVIKGRVESLKR 826
           VLQWMDDAGIQPSNAMY DILYFAQNCGGAECAA+IK RVESLKR
Sbjct: 781 VLQWMDDAGIQPSNAMYNDILYFAQNCGGAECAAIIKERVESLKR 825

[Close]
BLAST of Lcy10g004740 vs. NCBI nr
Match: XP_022983707.1 (pentatricopeptide repeat-containing protein At2g41720 isoform X2 [Cucurbita maxima])

HSP 1 Score: 1550.8 bits (4014), Expect = 0.0e+00
Identity = 750/825 (90.91%), Postives = 796/825 (96.48%), Query Frame = 0 

Query: 1   MATLPPHCHYRSSHHHKISHPPDLTGRSLNSTLPKTLVICKNSKNESAFEEKKQVLVDYD 60
           MATLPPHC +R S HHK S+  DLTGRSL+STLPKTL+ICKNSKNESAFEE KQVLVDYD
Sbjct: 1   MATLPPHCPHRPSRHHKFSYTADLTGRSLDSTLPKTLIICKNSKNESAFEETKQVLVDYD 60

Query: 61  HGKHEIRTLVNGFRKLDIPRRYQLRVEGERFQKDWTVSEVVQRILKLQRHGDVEALLNCW 120
           +GKHE+RTLVNG RKLDIPRRYQLRV GERFQKDWTV+EVVQRILKLQRHGDVEALLNCW
Sbjct: 61  NGKHEVRTLVNGLRKLDIPRRYQLRVGGERFQKDWTVTEVVQRILKLQRHGDVEALLNCW 120

Query: 121 VGRFSRKNYPALMKELTQSGSIEHCVQVFDWMKNQRNYCARNDIYNMMIRLHARHNRTDQ 180
           VGRF+RKNYPALMKELTQ+GSIEHCVQVFDWMKNQ+NYCARNDIYNMMIRLHARHNR DQ
Sbjct: 121 VGRFARKNYPALMKELTQNGSIEHCVQVFDWMKNQKNYCARNDIYNMMIRLHARHNRIDQ 180

Query: 181 ARGLFFEMQKWRCKPDAETYNALINAHGRAGQWRWAMNIMEDMLRAAIPPSRSTFNNLIN 240
           ARGLFFEMQKWRCKPDAETYN+LINAHGRAGQWRWAMNI+EDMLRAAIPPSRSTFNNLIN
Sbjct: 181 ARGLFFEMQKWRCKPDAETYNSLINAHGRAGQWRWAMNILEDMLRAAIPPSRSTFNNLIN 240

Query: 241 ACGSCGNWREALRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELMKSTNIRP 300
           ACGS GNWREALRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELMK TNIRP
Sbjct: 241 ACGSSGNWREALRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELMKGTNIRP 300

Query: 301 DTTTLNIVIHCLIKVKQYGQAIEIFNSMREKRAECRPDVVTFTSIIHLYSVCGQIEDCKA 360
           DTTTLNIVIHCLIKVKQYGQAIEIFNSMREKRAECRPDVVTFT+IIHLYSVCGQIEDCKA
Sbjct: 301 DTTTLNIVIHCLIKVKQYGQAIEIFNSMREKRAECRPDVVTFTTIIHLYSVCGQIEDCKA 360

Query: 361 VFSTMVGEGIKPNIVSYNAIISAYASHGMDREAFSVFDDMKKSGFRPDVISYTSLLSAFG 420
           VFSTM+GEGIKPNIVSYNA+ISAYASHGMD+EA +VFD+MK+SGFRPDV+SYTSLLS FG
Sbjct: 361 VFSTMLGEGIKPNIVSYNALISAYASHGMDKEASTVFDEMKRSGFRPDVVSYTSLLSTFG 420

Query: 421 RSQQPARAREVFDMMKRNKCKPNLVSYNALIDAYGSNGYLAQAVDILREMEQDGIHPNVV 480
           RSQQP RAREVFDMMKRNKCKPNLVSYNALIDAYGSNGYLAQAVDILREMEQDGIHPNVV
Sbjct: 421 RSQQPTRAREVFDMMKRNKCKPNLVSYNALIDAYGSNGYLAQAVDILREMEQDGIHPNVV 480

Query: 481 SICTLLAACGRLGQKVNIDAVLSAAELRGIQLNTISYNSAIGSYMNIGEYEKAINLYRLM 540
           SICTLLA+CGR GQKVN+DAVLSAAELRGI+LNTI+YNSAIGSYMNIGEYEKAI+LYR M
Sbjct: 481 SICTLLASCGRFGQKVNVDAVLSAAELRGIRLNTIAYNSAIGSYMNIGEYEKAIDLYRSM 540

Query: 541 KKESSKPDSVTYTILISSCCRMSKYDEALYFFNEMVDVRIPMSKEVYSSMICAYSKQGQL 600
           K +++KPDSVTY ILISSCCRMSKYDEA++FF EMVD++IP+S+E+YSSMICAYSKQGQL
Sbjct: 541 KNKNTKPDSVTYNILISSCCRMSKYDEAIHFFKEMVDLKIPLSEEIYSSMICAYSKQGQL 600

Query: 601 MKAESLFNSMKGSGCCPDLVTYTAMINAYSASETWEKACALFNEMETNNIELDPIACSAL 660
           +KAE+LFNS+KGSGCCPDLVTYTAMINAYS +ETWEKAC+L++EMETNNI+LD IACSAL
Sbjct: 601 VKAETLFNSLKGSGCCPDLVTYTAMINAYSTTETWEKACSLYHEMETNNIQLDSIACSAL 660

Query: 661 MKAFNKGNQASNVLILAEIMKEKGIPFNDTNFFEMLSACSILRDWSKATDLIKLMEPSLH 720
           MKA+NKGNQASNVLILAEIMKEKGIPFND NFFEMLSACS LRDW KATD+IKLMEPSLH
Sbjct: 661 MKAYNKGNQASNVLILAEIMKEKGIPFNDANFFEMLSACSTLRDWRKATDIIKLMEPSLH 720

Query: 721 LVSVGTINHLLHFLGKSGKTEIMMKLFYRFVALGSSVNISTYSILLKNLLSAGNWRKYIE 780
           LVSVGTINHLLHFLGKSGK EIMMKLFYRFVALGSSVNISTYSILLKNLLS GNWRKYIE
Sbjct: 721 LVSVGTINHLLHFLGKSGKMEIMMKLFYRFVALGSSVNISTYSILLKNLLSFGNWRKYIE 780

Query: 781 VLQWMDDAGIQPSNAMYKDILYFAQNCGGAECAAVIKGRVESLKR 826
           VLQWMDDAGIQPSNAMY DILYFAQNCGGAECAA+IK RVESLKR
Sbjct: 781 VLQWMDDAGIQPSNAMYNDILYFAQNCGGAECAAIIKERVESLKR 825

[Close]
BLAST of Lcy10g004740 vs. TAIR 10
Match: AT2G41720.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 1104.0 bits (2854), Expect = 0.0e+00
Identity = 522/782 (66.75%), Postives = 641/782 (81.97%), Query Frame = 0 

Query: 43  SKNESAFEEKKQVLVDYDHGKHEIRTLVNGFRKLDIPRRYQLRVEGERFQKDWTVSEVVQ 102
           +K   AF+EKK V V+YD G+HE+   + G RK DIPRRY++RVE +RFQKDW+VSEVV 
Sbjct: 24  TKASDAFQEKKSVSVNYDRGEHEVSVNIGGLRKADIPRRYRIRVENDRFQKDWSVSEVVD 83

Query: 103 RILKLQRHGDVEALLNCWVGRFSRKNYPALMKELTQSGSIEHCVQVFDWMKNQRNYCARN 162
           R++ L R  +V+ +LN WVGRF+RKN+P L++EL++ G IE CV VF WMK Q+NYCARN
Sbjct: 84  RLMALNRWEEVDGVLNSWVGRFARKNFPVLIRELSRRGCIELCVNVFKWMKIQKNYCARN 143

Query: 163 DIYNMMIRLHARHNRTDQARGLFFEMQKWRCKPDAETYNALINAHGRAGQWRWAMNIMED 222
           DIYNMMIRLHARHN  DQARGLFFEMQKW CKPDAETY+ALINAHGRAGQWRWAMN+M+D
Sbjct: 144 DIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDD 203

Query: 223 MLRAAIPPSRSTFNNLINACGSCGNWREALRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQ 282
           MLRAAI PSRST+NNLINACGS GNWREAL VCKKMTDNGVGPDLVTHNIVLSAYKSG Q
Sbjct: 204 MLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQ 263

Query: 283 YSKALSYFELMKSTNIRPDTTTLNIVIHCLIKVKQYGQAIEIFNSMREKRAECRPDVVTF 342
           YSKALSYFELMK   +RPDTTT NI+I+CL K+ Q  QA+++FNSMREKRAECRPDVVTF
Sbjct: 264 YSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTF 323

Query: 343 TSIIHLYSVCGQIEDCKAVFSTMVGEGIKPNIVSYNAIISAYASHGMDREAFSVFDDMKK 402
           TSI+HLYSV G+IE+C+AVF  MV EG+KPNIVSYNA++ AYA HGM   A SV  D+K+
Sbjct: 324 TSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQ 383

Query: 403 SGFRPDVISYTSLLSAFGRSQQPARAREVFDMMKRNKCKPNLVSYNALIDAYGSNGYLAQ 462
           +G  PDV+SYT LL+++GRS+QP +A+EVF MM++ + KPN+V+YNALIDAYGSNG+LA+
Sbjct: 384 NGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAE 443

Query: 463 AVDILREMEQDGIHPNVVSICTLLAACGRLGQKVNIDAVLSAAELRGIQLNTISYNSAIG 522
           AV+I R+MEQDGI PNVVS+CTLLAAC R  +KVN+D VLSAA+ RGI LNT +YNSAIG
Sbjct: 444 AVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIG 503

Query: 523 SYMNIGEYEKAINLYRLMKKESSKPDSVTYTILISSCCRMSKYDEALYFFNEMVDVRIPM 582
           SY+N  E EKAI LY+ M+K+  K DSVT+TILIS  CRMSKY EA+ +  EM D+ IP+
Sbjct: 504 SYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPL 563

Query: 583 SKEVYSSMICAYSKQGQLMKAESLFNSMKGSGCCPDLVTYTAMINAYSASETWEKACALF 642
           +KEVYSS++CAYSKQGQ+ +AES+FN MK +GC PD++ YT+M++AY+ASE W KAC LF
Sbjct: 564 TKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELF 623

Query: 643 NEMETNNIELDPIACSALMKAFNKGNQASNVLILAEIMKEKGIPFNDTNFFEMLSACSIL 702
            EME N IE D IACSALM+AFNKG Q SNV +L ++M+EK IPF    FFE+ SAC+ L
Sbjct: 624 LEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTL 683

Query: 703 RDWSKATDLIKLMEPSLHLVSVGTINHLLHFLGKSGKTEIMMKLFYRFVALGSSVNISTY 762
           ++W +A DLI++M+P L  +S+G  N +LH  GKSGK E MMKLFY+ +A G  +N+ TY
Sbjct: 684 QEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTY 743

Query: 763 SILLKNLLSAGNWRKYIEVLQWMDDAGIQPSNAMYKDILYFAQNCGGAECAAVIKGRVES 822
           +ILL++LL+ GNWRKYIEVL+WM  AGIQPSN MY+DI+ F +   G E   +I+ ++ES
Sbjct: 744 AILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDIISFGERSAGIEFEPLIRQKLES 803

Query: 823 LK 825
           L+
Sbjct: 804 LR 805

[Close]
BLAST of Lcy10g004740 vs. TAIR 10
Match: AT2G41720.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 961.4 bits (2484), Expect = 4.5e-280
Identity = 457/673 (67.90%), Postives = 556/673 (82.62%), Query Frame = 0 

Query: 152 MKNQRNYCARNDIYNMMIRLHARHNRTDQARGLFFEMQKWRCKPDAETYNALINAHGRAG 211
           MK Q+NYCARNDIYNMMIRLHARHN  DQARGLFFEMQKW CKPDAETY+ALINAHGRAG
Sbjct: 1   MKIQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAG 60

Query: 212 QWRWAMNIMEDMLRAAIPPSRSTFNNLINACGSCGNWREALRVCKKMTDNGVGPDLVTHN 271
           QWRWAMN+M+DMLRAAI PSRST+NNLINACGS GNWREAL VCKKMTDNGVGPDLVTHN
Sbjct: 61  QWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHN 120

Query: 272 IVLSAYKSGAQYSKALSYFELMKSTNIRPDTTTLNIVIHCLIKVKQYGQAIEIFNSMREK 331
           IVLSAYKSG QYSKALSYFELMK   +RPDTTT NI+I+CL K+ Q  QA+++FNSMREK
Sbjct: 121 IVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREK 180

Query: 332 RAECRPDVVTFTSIIHLYSVCGQIEDCKAVFSTMVGEGIKPNIVSYNAIISAYASHGMDR 391
           RAECRPDVVTFTSI+HLYSV G+IE+C+AVF  MV EG+KPNIVSYNA++ AYA HGM  
Sbjct: 181 RAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSG 240

Query: 392 EAFSVFDDMKKSGFRPDVISYTSLLSAFGRSQQPARAREVFDMMKRNKCKPNLVSYNALI 451
            A SV  D+K++G  PDV+SYT LL+++GRS+QP +A+EVF MM++ + KPN+V+YNALI
Sbjct: 241 TALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALI 300

Query: 452 DAYGSNGYLAQAVDILREMEQDGIHPNVVSICTLLAACGRLGQKVNIDAVLSAAELRGIQ 511
           DAYGSNG+LA+AV+I R+MEQDGI PNVVS+CTLLAAC R  +KVN+D VLSAA+ RGI 
Sbjct: 301 DAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGIN 360

Query: 512 LNTISYNSAIGSYMNIGEYEKAINLYRLMKKESSKPDSVTYTILISSCCRMSKYDEALYF 571
           LNT +YNSAIGSY+N  E EKAI LY+ M+K+  K DSVT+TILIS  CRMSKY EA+ +
Sbjct: 361 LNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISY 420

Query: 572 FNEMVDVRIPMSKEVYSSMICAYSKQGQLMKAESLFNSMKGSGCCPDLVTYTAMINAYSA 631
             EM D+ IP++KEVYSS++CAYSKQGQ+ +AES+FN MK +GC PD++ YT+M++AY+A
Sbjct: 421 LKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNA 480

Query: 632 SETWEKACALFNEMETNNIELDPIACSALMKAFNKGNQASNVLILAEIMKEKGIPFNDTN 691
           SE W KAC LF EME N IE D IACSALM+AFNKG Q SNV +L ++M+EK IPF    
Sbjct: 481 SEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAV 540

Query: 692 FFEMLSACSILRDWSKATDLIKLMEPSLHLVSVGTINHLLHFLGKSGKTEIMMKLFYRFV 751
           FFE+ SAC+ L++W +A DLI++M+P L  +S+G  N +LH  GKSGK E MMKLFY+ +
Sbjct: 541 FFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKII 600

Query: 752 ALGSSVNISTYSILLKNLLSAGNWRKYIEVLQWMDDAGIQPSNAMYKDILYFAQNCGGAE 811
           A G  +N+ TY+ILL++LL+ GNWRKYIEVL+WM  AGIQPSN MY+DI+ F +   G E
Sbjct: 601 ASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDIISFGERSAGIE 660

Query: 812 CAAVIKGRVESLK 825
              +I+ ++  ++
Sbjct: 661 FEPLIRQKLGEMR 673

[Close]
BLAST of Lcy10g004740 vs. TAIR 10
Match: AT5G02860.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 249.2 bits (635), Expect = 1.1e-65
Identity = 156/631 (24.72%), Postives = 306/631 (48.49%), Query Frame = 0 

Query: 172 HARHNRTDQARGLFFEMQKWRCKPDAETYNALINAHGRAGQWRWAMNIMEDMLRAAIPPS 231
           H + +   +A   F + + ++   D      +I+  G+ G+   A N+   +        
Sbjct: 148 HKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLD 207

Query: 232 RSTFNNLINACGSCGNWREALRVCKKMTDNGVGPDLVTHNIVLSAY-KSGAQYSKALSYF 291
             ++ +LI+A  + G +REA+ V KKM ++G  P L+T+N++L+ + K G  ++K  S  
Sbjct: 208 VYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLV 267

Query: 292 ELMKSTNIRPDTTTLNIVIHCLIKVKQYGQAIEIFNSMREKRAECRPDVVTFTSIIHLYS 351
           E MKS  I PD  T N +I C  +   + +A ++F  M  K A    D VT+ +++ +Y 
Sbjct: 268 EKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEM--KAAGFSYDKVTYNALLDVYG 327

Query: 352 VCGQIEDCKAVFSTMVGEGIKPNIVSYNAIISAYASHGMDREAFSVFDDMKKSGFRPDVI 411
              + ++   V + MV  G  P+IV+YN++ISAYA  GM  EA  + + M + G +PDV 
Sbjct: 328 KSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVF 387

Query: 412 SYTSLLSAFGRSQQPARAREVFDMMKRNKCKPNLVSYNALIDAYGSNGYLAQAVDILREM 471
           +YT+LLS F R+ +   A  +F+ M+   CKPN+ ++NA I  YG+ G   + + I  E+
Sbjct: 388 TYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEI 447

Query: 472 EQDGIHPNVVSICTLLAACGRLGQKVNIDAVLSAAELRGIQLNTISYNSAIGSYMNIGEY 531
              G+ P++V+  TLLA  G+ G    +  V    +  G      ++N+ I +Y   G +
Sbjct: 448 NVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 507

Query: 532 EKAINLYRLMKKESSKPDSVTYTILISSCCRMSKYDEALYFFNEMVDVRIPMSKEVYSSM 591
           E+A+ +YR M      PD  TY  ++++  R   ++++     EM D R   ++  Y S+
Sbjct: 508 EQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSL 567

Query: 592 ICAYSKQGQLMKAESLFNSMKGSGCCPDLVTYTAMINAYSASETWEKACALFNEMETNNI 651
           + AY+   ++    SL   +      P  V    ++   S  +   +A   F+E++    
Sbjct: 568 LHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGF 627

Query: 652 ELDPIACSALMKAFNKGNQASNVLILAEIMKEKGIPFNDTNFFEMLSACSILRDWSKATD 711
             D    ++++  + +    +    + + MKE+G   +   +  ++   S   D+ K+ +
Sbjct: 628 SPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEE 687

Query: 712 LIKLMEPSLHLVSVGTINHLLHFLGKSGKTEIMMKLFYRFVALGSSVNISTYSILLKNLL 771
           +++ +        + + N +++   ++ +     ++F      G   ++ TY+  + +  
Sbjct: 688 ILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYA 747

Query: 772 SAGNWRKYIEVLQWMDDAGIQPSNAMYKDIL 802
           +   + + I V+++M   G +P+   Y  I+
Sbjct: 748 ADSMFEEAIGVVRYMIKHGCRPNQNTYNSIV 776

[Close]
BLAST of Lcy10g004740 vs. TAIR 10
Match: AT1G74850.1 (plastid transcriptionally active 2 )

HSP 1 Score: 239.2 bits (609), Expect = 1.2e-62
Identity = 163/598 (27.26%), Postives = 280/598 (46.82%), Query Frame = 0 

Query: 86  VEGERFQKDWTVSEVVQRILKLQRHGDVEALLNCWVGRFSRKNYPALMKELTQSGSIEHC 145
           V  E+ +  + V  ++ ++  L   G +   L+ +  + S  ++  + KE    G  +  
Sbjct: 65  VSVEKGKYSYDVESLINKLSSLPPRGSIARCLDIFKNKLSLNDFALVFKEFAGRGDWQRS 124

Query: 146 VQVFDWMKNQRNYCARND-IYNMMIRLHARHNRTDQARGLFFEMQKWRCKPDAETYNALI 205
           +++F +M+ Q  +C  N+ IY +MI L  R    D+   +F EM          +Y ALI
Sbjct: 125 LRLFKYMQRQ-IWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALI 184

Query: 206 NAHGRAGQWRWAMNIMEDMLRAAIPPSRSTFNNLINACGSCG-NWREALRVCKKMTDNGV 265
           NA+GR G++  ++ +++ M    I PS  T+N +INAC   G +W   L +  +M   G+
Sbjct: 185 NAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGI 244

Query: 266 GPDLVTHNIVLSAYKSGAQYSKALSYFELMKSTNIRPDTTTLNIVIHCLIKVKQYGQAIE 325
            PD+VT+N +LSA        +A   F  M    I PD TT             Y   +E
Sbjct: 245 QPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTT-------------YSHLVE 304

Query: 326 IFNSMREKRAECRPDVVTFTSIIHLYSVCGQIEDCKAVFSTMVGEGIKPNIVSYNAIISA 385
            F  +R                  L  VC        +   M   G  P+I SYN ++ A
Sbjct: 305 TFGKLR-----------------RLEKVCD-------LLGEMASGGSLPDITSYNVLLEA 364

Query: 386 YASHGMDREAFSVFDDMKKSGFRPDVISYTSLLSAFGRSQQPARAREVFDMMKRNKCKPN 445
           YA  G  +EA  VF  M+ +G  P+  +Y+ LL+ FG+S +    R++F  MK +   P+
Sbjct: 365 YAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPD 424

Query: 446 LVSYNALIDAYGSNGYLAQAVDILREMEQDGIHPNVVSICTLLAACGRLGQKVNIDAVLS 505
             +YN LI+ +G  GY  + V +  +M ++ I P++ +   ++ ACG+ G   +   +L 
Sbjct: 425 AATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQ 484

Query: 506 AAELRGIQLNTISYNSAIGSYMNIGEYEKAINLYRLMKKESSKPDSVTYTILISSCCRMS 565
                 I  ++ +Y   I ++     YE+A+  +  M +  S P   T+  L+ S  R  
Sbjct: 485 YMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGG 544

Query: 566 KYDEALYFFNEMVDVRIPMSKEVYSSMICAYSKQGQLMKAESLFNSMKGSGCCPDLVTYT 625
              E+    + +VD  IP +++ +++ I AY + G+  +A   +  M+ S C PD  T  
Sbjct: 545 LVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLE 604

Query: 626 AMINAYSASETWEKACALFNEMETNNIELDPIACSALMKA-FNKGNQASNVLILAEIM 681
           A+++ YS +   ++    F EM+ ++I L  I C  +M A + K  +  +V  L E M
Sbjct: 605 AVLSVYSFARLVDECREQFEEMKASDI-LPSIMCYCMMLAVYGKTERWDDVNELLEEM 623

[Close]
BLAST of Lcy10g004740 vs. TAIR 10
Match: AT5G59900.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 223.0 bits (567), Expect = 8.8e-58
Identity = 175/736 (23.78%), Postives = 325/736 (44.16%), Query Frame = 0 

Query: 96  TVSEVVQRILKLQRHGDVEALLNCWVGRFSRKN---YPALMKELTQSGSIEHCVQVFDWM 155
           T+S ++  ++K +  G    L N  V    R +   Y  +++ L +   +    ++   M
Sbjct: 194 TLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHM 253

Query: 156 KNQRNYCARNDI-YNMMIRLHARHNRTDQARGLFFEMQKWRCKPDAETYNALINAHGRAG 215
             +   C  N + YN++I    +  +  +A G+  ++     KPD  TY  L+    +  
Sbjct: 254 --EATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQ 313

Query: 216 QWRWAMNIMEDMLRAAIPPSRSTFNNLINACGSCGNWREALRVCKKMTDNGVGPDLVTHN 275
           ++   + +M++ML     PS +  ++L+      G   EAL + K++ D GV P+L  +N
Sbjct: 314 EFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYN 373

Query: 276 IVLSAYKSGAQYSKALSYFELMKSTNIRPDTTTLNIVIHCLIKVKQYGQAIEIFNSMREK 335
            ++ +   G ++ +A   F+ M    +RP+  T +I+I    +  +   A+     M + 
Sbjct: 374 ALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVD- 433

Query: 336 RAECRPDVVTFTSIIHLYSVCGQIEDCKAVFSTMVGEGIKPNIVSYNAIISAYASHGMDR 395
               +  V  + S+I+ +   G I   +   + M+ + ++P +V+Y +++  Y S G   
Sbjct: 434 -TGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKIN 493

Query: 396 EAFSVFDDMKKSGFRPDVISYTSLLSAFGRSQQPARAREVFDMMKRNKCKPNLVSYNALI 455
           +A  ++ +M   G  P + ++T+LLS   R+     A ++F+ M     KPN V+YN +I
Sbjct: 494 KALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMI 553

Query: 456 DAYGSNGYLAQAVDILREMEQDGIHPNVVSICTLLAACGRLGQKVNIDAVLSAAELRGIQ 515
           + Y   G +++A + L+EM + GI P+  S   L+      GQ       +        +
Sbjct: 554 EGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCE 613

Query: 516 LNTISYNSAIGSYMNIGEYEKAINLYRLMKKESSKPDSVTYTILISSCCRMSKYDEALYF 575
           LN I Y   +  +   G+ E+A+++ + M +     D V Y +LI     +   D  L+F
Sbjct: 614 LNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDG--SLKHKDRKLFF 673

Query: 576 --FNEMVDVRIPMSKEVYSSMICAYSKQGQLMKAESLFNSMKGSGCCPDLVTYTAMINAY 635
               EM D  +     +Y+SMI A SK G   +A  +++ M   GC P+ VTYTA+IN  
Sbjct: 674 GLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGL 733

Query: 636 SASETWEKACALFNEMETNNIELDPIACSALMKAFNKGNQASNVLILAEIMKEKGIPFND 695
             +          NE E        + CS +    +  NQ +                  
Sbjct: 734 CKA-------GFVNEAE--------VLCSKMQPVSSVPNQVTYGC--------------- 793

Query: 696 TNFFEMLSACSILRDWSKATDLIKLMEPSLHLVSVGTINHLLHFLGKSGKTEIMMKLFYR 755
             F ++L+   +  D  KA +L   +   L L +  T N L+    + G+ E   +L  R
Sbjct: 794 --FLDILTKGEV--DMQKAVELHNAILKGL-LANTATYNMLIRGFCRQGRIEEASELITR 853

Query: 756 FVALGSSVNISTYSILLKNLLSAGNWRKYIEVLQWMDDAGIQPSNAMYKDILYFAQNCGG 815
            +  G S +  TY+ ++  L    + +K IE+   M + GI+P    Y  +++    C  
Sbjct: 854 MIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGC--CVA 886

Query: 816 AECAAVIKGRVESLKR 826
            E     + R E L++
Sbjct: 914 GEMGKATELRNEMLRQ 886

The following BLAST results are available for this feature:
BLAST of Lcy10g004740 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8RWS80.0e+0066.75Pentatricopeptide repeat-containing protein At2g41720 OS=Arabidopsis thaliana OX... [more]
Q9LYZ91.6e-6424.72Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana OX... [more]
Q9S7Q21.7e-6127.26Pentatricopeptide repeat-containing protein At1g74850, chloroplastic OS=Arabidop... [more]
Q76C992.2e-5824.92Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=Rf1 PE=2 SV... [more]
Q9FJE61.2e-5623.78Putative pentatricopeptide repeat-containing protein At5g59900 OS=Arabidopsis th... [more]
BLAST of Lcy10g004740 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1J0420.0e+0090.91pentatricopeptide repeat-containing protein At2g41720 isoform X2 OS=Cucurbita ma... [more]
A0A6J1F7H20.0e+0090.55pentatricopeptide repeat-containing protein At2g41720 isoform X1 OS=Cucurbita mo... [more]
A0A6J1J3540.0e+0090.85pentatricopeptide repeat-containing protein At2g41720 isoform X1 OS=Cucurbita ma... [more]
A0A6J1J8H80.0e+0090.85pentatricopeptide repeat-containing protein At2g41720 isoform X3 OS=Cucurbita ma... [more]
A0A6J1DRE70.0e+0090.79pentatricopeptide repeat-containing protein At2g41720 OS=Momordica charantia OX=... [more]
BLAST of Lcy10g004740 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023526156.10.0e+0090.79pentatricopeptide repeat-containing protein At2g41720 isoform X2 [Cucurbita pepo... [more]
XP_038903756.10.0e+0091.89pentatricopeptide repeat-containing protein At2g41720 isoform X2 [Benincasa hisp... [more]
XP_023526155.10.0e+0090.67pentatricopeptide repeat-containing protein At2g41720 isoform X1 [Cucurbita pepo... [more]
KAG6580916.10.0e+0090.79Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
XP_022983707.10.0e+0090.91pentatricopeptide repeat-containing protein At2g41720 isoform X2 [Cucurbita maxi... [more]
BLAST of Lcy10g004740 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G41720.10.0e+0066.75Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT2G41720.24.5e-28067.90Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT5G02860.11.1e-6524.72Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G74850.11.2e-6227.26plastid transcriptionally active 2 [more]
AT5G59900.18.8e-5823.78Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 259..330
e-value: 1.7E-14
score: 55.7
coord: 472..580
e-value: 2.9E-23
score: 84.4
coord: 402..471
e-value: 2.2E-21
score: 78.2
coord: 97..258
e-value: 1.7E-34
score: 121.0
coord: 331..401
e-value: 1.0E-18
score: 69.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 670..824
e-value: 6.1E-18
score: 67.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 581..669
e-value: 2.0E-24
score: 87.9
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 310..607
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 750..801
e-value: 0.0086
score: 16.1
coord: 332..384
e-value: 7.1E-12
score: 45.2
coord: 395..457
e-value: 4.4E-19
score: 68.3
coord: 466..502
e-value: 0.0055
score: 16.7
coord: 641..686
e-value: 0.0014
score: 18.7
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 304..331
e-value: 0.016
score: 15.4
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 513..561
e-value: 1.2E-14
score: 54.2
coord: 586..629
e-value: 9.3E-12
score: 45.0
coord: 164..206
e-value: 5.1E-11
score: 42.6
coord: 234..277
e-value: 8.9E-9
score: 35.4
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 445..479
e-value: 3.1E-8
score: 31.3
coord: 199..231
e-value: 3.3E-6
score: 24.9
coord: 164..197
e-value: 5.9E-8
score: 30.4
coord: 234..266
e-value: 2.2E-7
score: 28.6
coord: 550..580
e-value: 1.2E-8
score: 32.6
coord: 515..548
e-value: 2.1E-6
score: 25.5
coord: 586..618
e-value: 6.7E-10
score: 36.5
coord: 304..331
e-value: 5.4E-5
score: 21.1
coord: 340..374
e-value: 1.6E-5
score: 22.7
coord: 268..302
e-value: 1.3E-5
score: 23.1
coord: 410..443
e-value: 4.7E-8
score: 30.7
coord: 375..409
e-value: 6.4E-10
score: 36.6
coord: 620..653
e-value: 1.1E-6
score: 26.4
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 266..300
score: 10.062531
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 231..265
score: 11.8273
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 408..442
score: 12.046526
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 583..617
score: 11.750571
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 196..230
score: 11.925952
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 373..407
score: 13.504379
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 758..792
score: 10.150222
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 161..195
score: 10.05157
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 443..477
score: 12.660359
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 338..372
score: 11.158661
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 618..652
score: 11.202506
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 301..335
score: 9.141782
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 513..547
score: 10.764054
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 548..582
score: 11.717688
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..26
NoneNo IPR availablePANTHERPTHR47938:SF5OS07G0213300 PROTEINcoord: 35..801
NoneNo IPR availablePANTHERPTHR47938RESPIRATORY COMPLEX I CHAPERONE (CIA84), PUTATIVE (AFU_ORTHOLOGUE AFUA_2G06020)-RELATEDcoord: 35..801

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy10g004740.1Lcy10g004740.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010239 chloroplast mRNA processing
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0008380 RNA splicing
cellular_component GO:0009507 chloroplast
molecular_function GO:0005515 protein binding
molecular_function GO:0003735 structural constituent of ribosome