Lcy10g003690 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAGTGACCTATGTTGTCGGGAGAGAACGAGGATGGACAGGAGATGTTTTGTCATCCTATGCAGTAAGCTTAGGATGACTTCCGATTTCGTAGGAATGGAGATTGTAGACGTTGAAGAGATGGTTGTGATGTTCTTACACATCGTTGCTCACGATGTTAAGAATAGAGTCATAAAAAGACAATTTGCACAGTCAGGGGAGATGGTTTCTCAGCACTTTAACGCAACTCTAAGCGTCGTACTACGCTTGTATGACGTTCTGCTTAAGAAACCAGTACCGATCACGGGTTCTTGCCAAGATGGGAGGTGGAAATGGTTCGAGGTATGGATACTATATGTTATTGCACATCGTGAAGATGTTACAATGTCTTCCTGACACTTGTAATGCGATGTCAAAACAGAATTGTTTAGGTGCATTGGACGGTACGTACATAAAGGTCAATGTCAGTGCCGCTGATCGACCCCGATATAGGACGTGAAAGGGTGACATTGCTACAAATGTGTTGGGCGTTGTCTCACCGAATGGTGAATTCATTTTCGTCATGCCGGGATGGGAAGGTTCGGCTGTTGATTCTCGTGTACTGAGGGATGCAATATCATGCCCCAATGGACTAGTTGTACCGAAGGGTATGAAACCCTCTCACAAACTAAATTTGGAACACTTATGTTAGCCTTCGGTACTTACCTCATTTTCTGAACAGGATATTACTACCTTTGTGATGTCGGGTACCCAAACGCAAAGGGTTTCTTGGCACCTTACAGAGGTGAGCGGTACCACTTATCTGAGTGGAGAGGTGGAGGTAGTGCACCGACTACACCACGAGAGTTCGTCAACATGAAACATTTCTCTGCCCGGAATGTCATTGAGAGAGCCTTCGGTGCGCTGAAAGGACGGTGAGCGATACTCCGTGGGAAGTCATACTACCCTGTTGGGACTCAGTGTCGGATCATAACGGCATGCTGCTTACTCCACAACCTCATCACCCGGGAGATGGGTTTAGACATATTGTTCGAAGAAGGGGATATTGGTGGGTCGGAACCCGTTCCTCTTGATGGGGAAAACATTACTATCATTCAAAGCTCCCCTGAATGGACTCATAAGCGAGATGACCTAGCGAACAGAATGTTCAATGCGTGGGGGCAATCTCAATGATCCTATTTGACCTAAGACTTTTTGCTCTGTTGTAATTGAACCAGATGTGGGTTGTTGGACCAATTTTTTTTTTTTTTTTTTAAATCTGAACCACCTATTTCGTGTTACTTTATCATGACTATCGAAGACTATCATTTCCTGTTATTATTATTCTTCTTAACTAACTTTGGAACTTGAATTACTTGCTAAATACCTCTTCTGCATTGTCAAACCAAAGCATTACACTGTCGACTGAATTTAATACGGACTTACGAACTTTTATCACGCACTACTATATGCATGTAGGTGAATGGCAGAAGCAGACAAACAACCAAAACATATATGGACGAGGTTGGAGGAGGCAAAATTGGTGGAATGCCTCGTGGAGCTTGTACATGAAGGTGGGTGGAGAGGTGAAAATGGCACGTTCAGGCTTGGATATCATGCACGACTCAAGCATATGATGAAAGAAAAAATGCCGACATGCACGATCGAATCCACATCTATAATTGACTCCAAGGTACGGTAGTTCAAAAGGCAGTACAGTGCAATCAACGAAATGTTGGGTCCCAAATGCAGTGGATTGGGGTGGAACGAAGAGTATAAGTGCATCGTAGCGGAGAAAGAAGTCTTCGATTAGTGGGTGAAGGTACGGTCAGTATTCATTAATTGTTATAATGCCTGTATATTATCGTTCCTAATATCCATTGACGTATATGCAGTCCCACTCAGCTGCAAAAGGTCTACTAAACAAGCCATTTCCTCACTACGAGGAACTCGCCTTCGTGTTCAGAAAGGATCGGGCTAGTGGATCGGGGTGCACAGTCCCAGCGGAACAAGCAGGAGAAAGCCCCCCAGGGGACGCAGAGGGAGATTGCAACTTCTAGGGGACACAGGATTATTATGTCCCAATTCCTCTAGTAGAAAATTTGGCAACGGATGTCGAGTTTGAGGACGTCCCCATAACACCCACAAGCCGACCGAGCACAGCGGGGTCCTCGCAGGGACGGAAGAGGAACAGGGCATCATACGAAGCAGAAGCCCTTGAAATAATGAGGCAGTCAGTCAGCATACAAGAGACACAGTTAGCGAAAATTGTTGACTGGCCGGACACGCAAGACACGAGGGAGTTCAAGCGGCGCGAAACAGTTGGGGAGATGCTCATGGCTCAGCCGGAGCTAACGGACGGCGAGAGAGTGTCCCTGATGCTATCCTGTTCGCCGGCCCCAAGATGA ATGAAAGTGACCTATGTTGTCGGGAGAGAACGAGGATGGACAGGAGATGTTTTGTCATCCTATGCATCCCACTCAGCTGCAAAAGGTCTACTAAACAAGCCATTTCCTCACTACGAGGAACTCGCCTTCGTGTTCAGAAAGGATCGGGCTAGTGGATCGGGGTGCACAGATTATTATGTCCCAATTCCTCTAGTAGAAAATTTGGCAACGGATGTCGAGTTTGAGGACGTCCCCATAACACCCACAAGCCGACCGAGCACAGCGGGGTCCTCGCAGGGACGGAAGAGGAACAGGGCATCATACGAAGCAGAAGCCCTTGAAATAATGAGGCAGTCAGTCAGCATACAAGAGACACAGTTAGCGAAAATTGTTGACTGGCCGGACACGCAAGACACGAGGGAGTTCAAGCGGCGCGAAACAGTTGGGGAGATGCTCATGGCTCAGCCGGAGCTAACGGACGGCGAGAGAGTGTCCCTGATGCTATCCTGTTCGCCGGCCCCAAGATGA ATGAAAGTGACCTATGTTGTCGGGAGAGAACGAGGATGGACAGGAGATGTTTTGTCATCCTATGCATCCCACTCAGCTGCAAAAGGTCTACTAAACAAGCCATTTCCTCACTACGAGGAACTCGCCTTCGTGTTCAGAAAGGATCGGGCTAGTGGATCGGGGTGCACAGATTATTATGTCCCAATTCCTCTAGTAGAAAATTTGGCAACGGATGTCGAGTTTGAGGACGTCCCCATAACACCCACAAGCCGACCGAGCACAGCGGGGTCCTCGCAGGGACGGAAGAGGAACAGGGCATCATACGAAGCAGAAGCCCTTGAAATAATGAGGCAGTCAGTCAGCATACAAGAGACACAGTTAGCGAAAATTGTTGACTGGCCGGACACGCAAGACACGAGGGAGTTCAAGCGGCGCGAAACAGTTGGGGAGATGCTCATGGCTCAGCCGGAGCTAACGGACGGCGAGAGAGTGTCCCTGATGCTATCCTGTTCGCCGGCCCCAAGATGA MKVTYVVGRERGWTGDVLSSYASHSAAKGLLNKPFPHYEELAFVFRKDRASGSGCTDYYVPIPLVENLATDVEFEDVPITPTSRPSTAGSSQGRKRNRASYEAEALEIMRQSVSIQETQLAKIVDWPDTQDTREFKRRETVGEMLMAQPELTDGERVSLMLSCSPAPR Homology
BLAST of Lcy10g003690 vs. ExPASy TrEMBL
Match: A0A6J1DW73 (uncharacterized protein LOC111025018 OS=Momordica charantia OX=3673 GN=LOC111025018 PE=4 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 1.5e-17 Identity = 56/160 (35.00%), Postives = 84/160 (52.50%), Query Frame = 0
BLAST of Lcy10g003690 vs. ExPASy TrEMBL
Match: A0A5A7U7R0 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G00810 PE=4 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 1.4e-10 Identity = 56/160 (35.00%), Postives = 82/160 (51.25%), Query Frame = 0
BLAST of Lcy10g003690 vs. ExPASy TrEMBL
Match: A0A5D3D058 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold32G00410 PE=4 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 3.1e-10 Identity = 54/159 (33.96%), Postives = 78/159 (49.06%), Query Frame = 0
BLAST of Lcy10g003690 vs. ExPASy TrEMBL
Match: A0A5A7VBC5 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1290G00070 PE=4 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 5.3e-10 Identity = 54/159 (33.96%), Postives = 80/159 (50.31%), Query Frame = 0
BLAST of Lcy10g003690 vs. ExPASy TrEMBL
Match: A0A5A7SWD8 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold515G00010 PE=3 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 5.3e-10 Identity = 54/160 (33.75%), Postives = 80/160 (50.00%), Query Frame = 0
BLAST of Lcy10g003690 vs. NCBI nr
Match: XP_022158565.1 (uncharacterized protein LOC111025018 [Momordica charantia]) HSP 1 Score: 99.4 bits (246), Expect = 3.2e-17 Identity = 56/160 (35.00%), Postives = 84/160 (52.50%), Query Frame = 0
BLAST of Lcy10g003690 vs. NCBI nr
Match: KAA0050216.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYJ98192.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 76.3 bits (186), Expect = 2.9e-10 Identity = 56/160 (35.00%), Postives = 82/160 (51.25%), Query Frame = 0
BLAST of Lcy10g003690 vs. NCBI nr
Match: XP_038899910.1 (uncharacterized protein LOC120087100 [Benincasa hispida]) HSP 1 Score: 75.5 bits (184), Expect = 4.9e-10 Identity = 54/171 (31.58%), Postives = 80/171 (46.78%), Query Frame = 0
BLAST of Lcy10g003690 vs. NCBI nr
Match: KAA0041235.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK16036.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 75.1 bits (183), Expect = 6.5e-10 Identity = 54/159 (33.96%), Postives = 78/159 (49.06%), Query Frame = 0
BLAST of Lcy10g003690 vs. NCBI nr
Match: KAA0064259.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 74.3 bits (181), Expect = 1.1e-09 Identity = 53/146 (36.30%), Postives = 74/146 (50.68%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
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