Lcy10g003490 (gene) Sponge gourd (P93075) v1

Overview
NameLcy10g003490
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionLOB domain-containing protein
LocationChr10: 6015724 .. 6018432 (-)
RNA-Seq ExpressionLcy10g003490
SyntenyLcy10g003490
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGCCACGTCTCTCCGCCACTCTCTCCGCCGCTGAAATGGAGAAAAGTGAGGCAAATATGGCGGCGGCGGTCAGTCCGTGTGCGGCTTGCAAGATTCTACGGCGGAGATGCAGAGAGAATTGCGTATTGGGGCCCTATTTTCCACCAAATGAGCCTCTCAAATTCACCATTGCCCATAGGGTATTTGGTGCTAGCAACATCATCAAGTTACTTCAGGTAACTAATTCACTCTTTCTCGTTCCGTAACATTATTGTTTCACATTTATTATCGGACATTTGAATGATTGGACGTATCGAAATATCTCTCTATACGATGTTTGAATTATGTGTTTGTTTTGCTTTTATTGTTTCACAATTATTGCTTGTCATGTTAAAATTGTTTTGAGACTGTCACGTCGAAATGTCAATCATAAATCTCTCTTACCCCTTTTTTTCTCTTGACTATAAAATTATCGCGCTCCACATTAAGTTGTAGGTTCAAATTTGATAATCTCCAAGTAACCAAGAGTTCTCTCTCATAAATCTAACTATATAAAATGTTGTTTTTGCAAGTTTACTCCAATATTATATGAAGTTGTGCATGCTTCTAAGAATTACGTGGTATTAAGTTTGTGTTCTTTCGCCAACAAGAGCATAGTTCAACTGGCATAAAGTTGTACTGATAACCACGAGATCTGTGATTCAAATCCCCCACCCCCATATTGTCAAAAAAAAAAAAAAATTGTGTTTTTTCAATTTATATGTTTGGGGGACTCGGTTCCTTTTCAGATTCGAACTACAAACCTGTTGATCATTAGGCAAATTTTTATTAGACTTTTTGTTAAAACTAATTTTTATTAGACTATTAAATTTTAGTGTAATAACATTTTTAATGAGCTATTTAGGTTAGATATATGAATGGGCTAGATTTTCAAATTTATGACTGTGGACATGTCTTTATCATCAAATCGAAACATAGTGATAAAATCAAACTTTGTACACCATGGGGATATAGTTTCAGTTTAATAATATTCCTTGGGTTTATTTCAAATATATATATATATATATATATATTCAGTGATAAAATTGAAAGGGATAAAATTGTATTTTTTATGTTATGTTTTGTGTTAGGTAAGGACTTAAATGAAAAAACAAAAAAGAAGGATGAAATTGAAATTCTTACAACATTAGGGATAAATTTGAAAAATGGCCTAAACTTTAGGGGCCAAATTATATCTTTAGTGTTTTGGGTAAAGTACACTTTTGGTCGAGATTTGAACTTAGTTTTTATTTCGTTACTAAATTTTCAAAACTAACTCTTTTGATCATTGGGATTTGAATTTAGTCTCTATTTGATGGTTAAGGTTTCAAAAGTCACTTGTTTAGTCTCCCAAGTTTGAATTTGATTTCAACTTTGGTCCCTGAAATTTGAAATTGGTTTCTAACGAGTCCCTACATAGAGTTGGTAGTTATTTGACCTAATAGAATAATGACACAATAGTTAACCTATGTTAACTAGATTTTGTTGATATATGTTTTTTAATTGAGTTGAGTTTTATTTTTAATATATTAGCTCATAGTTTTTATACTCAGGAACCAATTAAATATCAAATTCAAATCTCAAGAACCAAATATATTACGCTTTTGAAATCTCAAGAACTAAATAGAAACCAAACTCAAATCTCAAGACCGGAAGTAAAACATATGGACCAAATAGAGTTCAAATCCCAAGGACCAAAAACGTATTTTACCCTAATGATCTTTTTTATTACATAAATTTTTGTTTTTACAATCGCTTGCCATACATTTAGGTCCAATATCTCTCCTAATTATACCAAATGGTCCCTAACCTTTTAAGTAATTCCCAGTTTCACCCATAATCTTTTAGAATTTTCAATTATATTATTTTTAATAATTATTAAAAATGGTTAACAAAAGATTGATGTATTATTAAATCATTGATTTATAAATATATTTGAACAGATGAACATGTCACTTGAATGTTATTTCACACATGAAACTCAATTCGCTCCCAATCCAACCTGCCCATAAAAAAAATCGTTTATTCCAAGTAGCATATATTGTATGTTCGATATATTTCGTAACAATTTTCAACAATCGTAGGTATAACATCAATCGTATTATTGAACTTCTTTTCAGGATCTTCCTAAATCGCAAAGAGCAGACGCAGTGAACAGTATGGTATACGAAGCGAGTGCAAGAATAAGAGATCCAGTTTACGGGAGCACAGGCTCGATTTTCCAACTCCAAAGACAAATAAATGAGTTGCAAGCAGAGTTAGCCAAGGCTCAAGCAGAGCTTCTCAACATGCAATGTCAACAAGCCAATTTGGTGAGTCTAATTTGCAAGGAATTGGCTCAAATGCCACAACCACCAATGTTTGATCACAATTCACTTGATGGCATTTTCAACATTGGTAGCCCTCAAAGTTATCATCAAAGCTATTCACATTTGATTGAGGATAGTAATATTTTGGAGCCTCTTTGGACTTAGTTAGAAATTGGAAGTCAATTAATGGTGAATTTGGGGTTTTAATTTGAGAGGGAACAATCATATATACTATGAAATTGTATTAGTTTAGTTAAGAATCAAAGTTATAGATTGACTTTTATTTAAATCAATCATGTTACTTCTAGTGAAGAAACATTGATGCAAATTATCAACCTCATGTAGTTTTAATTTGATTGGAAAAATTATAAAGTTTAA

mRNA sequence

ATGAAGCCACGTCTCTCCGCCACTCTCTCCGCCGCTGAAATGGAGAAAAGTGAGGCAAATATGGCGGCGGCGGTCAGTCCGTGTGCGGCTTGCAAGATTCTACGGCGGAGATGCAGAGAGAATTGCGTATTGGGGCCCTATTTTCCACCAAATGAGCCTCTCAAATTCACCATTGCCCATAGGGTATTTGGTGCTAGCAACATCATCAAGTTACTTCAGGATCTTCCTAAATCGCAAAGAGCAGACGCAGTGAACAGTATGGTATACGAAGCGAGTGCAAGAATAAGAGATCCAGTTTACGGGAGCACAGGCTCGATTTTCCAACTCCAAAGACAAATAAATGAGTTGCAAGCAGAGTTAGCCAAGGCTCAAGCAGAGCTTCTCAACATGCAATGTCAACAAGCCAATTTGGTGAGTCTAATTTGCAAGGAATTGGCTCAAATGCCACAACCACCAATGTTTGATCACAATTCACTTGATGGCATTTTCAACATTGGTAGCCCTCAAAGTTATCATCAAAGCTATTCACATTTGATTGAGGATAGTAATATTTTGGAGCCTCTTTGGACTTAGTTAGAAATTGGAAGTCAATTAATGGTGAATTTGGGGTTTTAATTTGAGAGGGAACAATCATATATACTATGAAATTGTATTAGTTTAGTTAAGAATCAAAGTTATAGATTGACTTTTATTTAAATCAATCATGTTACTTCTAGTGAAGAAACATTGATGCAAATTATCAACCTCATGTAGTTTTAATTTGATTGGAAAAATTATAAAGTTTAA

Coding sequence (CDS)

ATGAAGCCACGTCTCTCCGCCACTCTCTCCGCCGCTGAAATGGAGAAAAGTGAGGCAAATATGGCGGCGGCGGTCAGTCCGTGTGCGGCTTGCAAGATTCTACGGCGGAGATGCAGAGAGAATTGCGTATTGGGGCCCTATTTTCCACCAAATGAGCCTCTCAAATTCACCATTGCCCATAGGGTATTTGGTGCTAGCAACATCATCAAGTTACTTCAGGATCTTCCTAAATCGCAAAGAGCAGACGCAGTGAACAGTATGGTATACGAAGCGAGTGCAAGAATAAGAGATCCAGTTTACGGGAGCACAGGCTCGATTTTCCAACTCCAAAGACAAATAAATGAGTTGCAAGCAGAGTTAGCCAAGGCTCAAGCAGAGCTTCTCAACATGCAATGTCAACAAGCCAATTTGGTGAGTCTAATTTGCAAGGAATTGGCTCAAATGCCACAACCACCAATGTTTGATCACAATTCACTTGATGGCATTTTCAACATTGGTAGCCCTCAAAGTTATCATCAAAGCTATTCACATTTGATTGAGGATAGTAATATTTTGGAGCCTCTTTGGACTTAG

Protein sequence

MKPRLSATLSAAEMEKSEANMAAAVSPCAACKILRRRCRENCVLGPYFPPNEPLKFTIAHRVFGASNIIKLLQDLPKSQRADAVNSMVYEASARIRDPVYGSTGSIFQLQRQINELQAELAKAQAELLNMQCQQANLVSLICKELAQMPQPPMFDHNSLDGIFNIGSPQSYHQSYSHLIEDSNILEPLWT
Homology
BLAST of Lcy10g003490 vs. ExPASy Swiss-Prot
Match: Q9LQR0 (LOB domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=LBD1 PE=2 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 5.0e-46
Identity = 90/133 (67.67%), Postives = 108/133 (81.20%), Query Frame = 0

Query: 9   LSAAEMEKSEANMAAAVSPCAACKILRRRCRENCVLGPYFPPNEPLKFTIAHRVFGASNI 68
           +S++       +    +SPCAACKILRRRC E CVL PYFPP +P KFTIAHRVFGASNI
Sbjct: 15  ISSSSSPPPSLSPRVVLSPCAACKILRRRCAERCVLAPYFPPTDPAKFTIAHRVFGASNI 74

Query: 69  IKLLQDLPKSQRADAVNSMVYEASARIRDPVYGSTGSIFQLQRQINELQAELAKAQAELL 128
           IK LQ+LP+SQR DAVNSMVYEA ARIRDPVYG  G+I+ LQRQ++ELQA+LAKAQ E++
Sbjct: 75  IKFLQELPESQRTDAVNSMVYEAEARIRDPVYGCAGAIYHLQRQVSELQAQLAKAQVEMV 134

Query: 129 NMQCQQANLVSLI 142
           NMQ Q++NL+ LI
Sbjct: 135 NMQFQRSNLLELI 147

BLAST of Lcy10g003490 vs. ExPASy Swiss-Prot
Match: Q9SK08 (LOB domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=LBD11 PE=2 SV=2)

HSP 1 Score: 183.0 bits (463), Expect = 3.3e-45
Identity = 98/180 (54.44%), Postives = 120/180 (66.67%), Query Frame = 0

Query: 25  VSPCAACKILRRRCRENCVLGPYFPPNEPLKFTIAHRVFGASNIIKLLQDLPKSQRADAV 84
           +SPCAACKILRRRC + CVL PYFPP +P KFTIAHRVFGASNIIK LQ+LP+SQR DAV
Sbjct: 53  LSPCAACKILRRRCADKCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQELPESQRTDAV 112

Query: 85  NSMVYEASARIRDPVYGSTGSIFQLQRQINELQAELAKAQAELLNMQCQQANLVSLI--- 144
           NSMVYEA AR+RDPVYG  G+I+ LQRQ++ELQA+LAK Q EL+ MQ Q+++L+ LI   
Sbjct: 113 NSMVYEAGARMRDPVYGCAGAIYHLQRQVSELQAQLAKTQVELVGMQLQRSSLLELIYNM 172

Query: 145 ----CKELAQMPQPPMFDHNSLDGIFNIGSPQSYHQSYSHLIEDSN-------ILEPLWT 191
                    Q  Q   F+ +   G   I SP         L +++N         +PLWT
Sbjct: 173 EQTKLSVQEQGQQKMSFESSFESGDEFISSPDEESNDLGFLEDNNNNNNSSMSWWDPLWT 232

BLAST of Lcy10g003490 vs. ExPASy Swiss-Prot
Match: Q9SHE9 (LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 1.1e-35
Identity = 81/179 (45.25%), Postives = 115/179 (64.25%), Query Frame = 0

Query: 16  KSEANMAAAVSPCAACKILRRRCRENCVLGPYFPPNEPLKFTIAHRVFGASNIIKLLQDL 75
           K  +    A SPCAACK+LRRRC ++CV  PYFP +EP KF   HRVFGASN+ K+LQ+L
Sbjct: 2   KESSRKQGAASPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQEL 61

Query: 76  PKSQRADAVNSMVYEASARIRDPVYGSTGSIFQLQRQINELQAELAKAQAELLNMQCQQA 135
           P  QR DAV+SMVYEA+AR+RDPVYG  G+I  LQ+QI+ LQA+LA AQAE+++++ +Q+
Sbjct: 62  PIHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRQS 121

Query: 136 NLV--SLICKELAQMPQPPMFDHNSLDGIFNIGSPQSYHQSYSH--LIEDSNILEPLWT 191
                  +C +       P              SPQ     +SH  +++++++ E +W+
Sbjct: 122 TNFPGHGLCPDSPSSSGSPSSKQ---------VSPQDNKGMFSHMDIVDEASLGESMWS 171

BLAST of Lcy10g003490 vs. ExPASy Swiss-Prot
Match: Q8LBW3 (LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 SV=2)

HSP 1 Score: 151.0 bits (380), Expect = 1.4e-35
Identity = 68/108 (62.96%), Postives = 90/108 (83.33%), Query Frame = 0

Query: 26  SPCAACKILRRRCRENCVLGPYFPPNEPLKFTIAHRVFGASNIIKLLQDLPKSQRADAVN 85
           SPCA+CK+LRRRC ++C+  PYFPP++P KF I H+VFGASN+ K+LQ+LP  QRADAVN
Sbjct: 7   SPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVN 66

Query: 86  SMVYEASARIRDPVYGSTGSIFQLQRQINELQAELAKAQAELLNMQCQ 134
           S+V+EA+AR+RDPVYG  G+I  LQ Q+++LQ +LA AQAE+L +Q Q
Sbjct: 67  SLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQ 114

BLAST of Lcy10g003490 vs. ExPASy Swiss-Prot
Match: Q8L5T5 (LOB domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=LBD15 PE=1 SV=2)

HSP 1 Score: 139.0 bits (349), Expect = 5.4e-32
Identity = 62/111 (55.86%), Postives = 85/111 (76.58%), Query Frame = 0

Query: 25  VSPCAACKILRRRCRENCVLGPYFPPNEPLKFTIAHRVFGASNIIKLLQDLPKSQRADAV 84
           ++PCAACK+LRRRC + C   PYF P+EP KF   H+VFGASN+ K+L ++P+SQRADA 
Sbjct: 43  ITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPESQRADAA 102

Query: 85  NSMVYEASARIRDPVYGSTGSIFQLQRQINELQAELAKAQAELLNMQCQQA 136
           NS+VYEA+ R+RDPVYG  G+I  LQ+Q+  LQAEL   ++E+L  + ++A
Sbjct: 103 NSLVYEANVRLRDPVYGCMGAISALQQQVQALQAELTAVRSEILKYKQREA 153

BLAST of Lcy10g003490 vs. ExPASy TrEMBL
Match: A0A5D3CLP6 (LOB domain-containing protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold769G00360 PE=3 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 3.4e-69
Identity = 141/184 (76.63%), Postives = 155/184 (84.24%), Query Frame = 0

Query: 14  MEKS-EANMAAAV------SPCAACKILRRRCRENCVLGPYFPPNEPLKFTIAHRVFGAS 73
           M+KS EAN A+AV       PCAACKILRRRCRENC LGPYFPP EPLKFTIAHRVFGAS
Sbjct: 1   MKKSEEANTASAVVVMGSTQPCAACKILRRRCRENCELGPYFPPMEPLKFTIAHRVFGAS 60

Query: 74  NIIKLLQDLPKSQRADAVNSMVYEASARIRDPVYGSTGSIFQLQRQINELQAELAKAQAE 133
           NIIKLLQ+LPKSQRADAVNSMVYEASARIRDP+YG  GSIF LQRQIN+LQ ELAKAQAE
Sbjct: 61  NIIKLLQNLPKSQRADAVNSMVYEASARIRDPIYGCAGSIFHLQRQINDLQIELAKAQAE 120

Query: 134 LLNMQCQQANLVSLICKELAQMPQPPMFDHNSLDGIFNIGSPQSYHQSYSHLIEDSNILE 191
           +L M CQQANL++LICKEL QMP+PPM DH      +NI SPQ Y+ SYS+L E+SN+LE
Sbjct: 121 VLRMHCQQANLMTLICKELGQMPEPPMHDH------YNIASPQGYY-SYSYLFEESNVLE 177

BLAST of Lcy10g003490 vs. ExPASy TrEMBL
Match: A0A1S3CK31 (LOB domain-containing protein 1-like OS=Cucumis melo OX=3656 GN=LOC103501684 PE=3 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 3.4e-69
Identity = 141/184 (76.63%), Postives = 155/184 (84.24%), Query Frame = 0

Query: 14  MEKS-EANMAAAV------SPCAACKILRRRCRENCVLGPYFPPNEPLKFTIAHRVFGAS 73
           M+KS EAN A+AV       PCAACKILRRRCRENC LGPYFPP EPLKFTIAHRVFGAS
Sbjct: 1   MKKSEEANTASAVVVMGSTQPCAACKILRRRCRENCELGPYFPPMEPLKFTIAHRVFGAS 60

Query: 74  NIIKLLQDLPKSQRADAVNSMVYEASARIRDPVYGSTGSIFQLQRQINELQAELAKAQAE 133
           NIIKLLQ+LPKSQRADAVNSMVYEASARIRDP+YG  GSIF LQRQIN+LQ ELAKAQAE
Sbjct: 61  NIIKLLQNLPKSQRADAVNSMVYEASARIRDPIYGCAGSIFHLQRQINDLQIELAKAQAE 120

Query: 134 LLNMQCQQANLVSLICKELAQMPQPPMFDHNSLDGIFNIGSPQSYHQSYSHLIEDSNILE 191
           +L M CQQANL++LICKEL QMP+PPM DH      +NI SPQ Y+ SYS+L E+SN+LE
Sbjct: 121 VLRMHCQQANLMTLICKELGQMPEPPMHDH------YNIASPQGYY-SYSYLFEESNVLE 177

BLAST of Lcy10g003490 vs. ExPASy TrEMBL
Match: A0A0A0LUS4 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G088440 PE=3 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 5.7e-69
Identity = 136/181 (75.14%), Postives = 151/181 (83.43%), Query Frame = 0

Query: 10  SAAEMEKSEANMAAAVSPCAACKILRRRCRENCVLGPYFPPNEPLKFTIAHRVFGASNII 69
           SA     S A +  + SPCAACKILRRRCRENC LGPYFP  EPLKFTIAHRVFGASNII
Sbjct: 4   SAETNTASTAVVVGSSSPCAACKILRRRCRENCELGPYFPSMEPLKFTIAHRVFGASNII 63

Query: 70  KLLQDLPKSQRADAVNSMVYEASARIRDPVYGSTGSIFQLQRQINELQAELAKAQAELLN 129
           KLLQDLP+SQR DAVNSMVYEASARIRDP+YG  GSIF LQRQIN+LQ ELAKAQAE+L 
Sbjct: 64  KLLQDLPESQRGDAVNSMVYEASARIRDPIYGCAGSIFHLQRQINDLQGELAKAQAEVLR 123

Query: 130 MQCQQANLVSLICKELAQMPQPPMFDHNSLDGIFNIGSPQSYHQSYSHLIEDSNILEPLW 189
           M CQQANL++LI KEL Q+PQPPM DH SL+  +NI SPQSYH SYS+L E+ N+LEP+W
Sbjct: 124 MHCQQANLMTLIWKELGQVPQPPMHDHQSLNDPYNIASPQSYH-SYSYLFEECNVLEPMW 183

Query: 190 T 191
           T
Sbjct: 184 T 183

BLAST of Lcy10g003490 vs. ExPASy TrEMBL
Match: A0A6J1DVT7 (LOB domain-containing protein 11-like OS=Momordica charantia OX=3673 GN=LOC111024535 PE=3 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 2.3e-65
Identity = 130/167 (77.84%), Postives = 144/167 (86.23%), Query Frame = 0

Query: 25  VSPCAACKILRRRCRENCVLGPYFPPNEPLKFTIAHRVFGASNIIKLLQDLPKSQRADAV 84
           VSPCAACKILRRRC E CVL PYFPP++P KFTIAHRVFGASNIIKLLQDLP+SQRADAV
Sbjct: 36  VSPCAACKILRRRCAEKCVLAPYFPPSDPFKFTIAHRVFGASNIIKLLQDLPESQRADAV 95

Query: 85  NSMVYEASARIRDPVYGSTGSIFQLQRQINELQAELAKAQAELLNMQCQQANLVSLICKE 144
           +S+VYEASARIRDPVYG  G+I QLQ+QINELQAELAK QAEL+NM C QA+LV+LICKE
Sbjct: 96  SSLVYEASARIRDPVYGCAGAICQLQKQINELQAELAKTQAELVNMHCHQASLVALICKE 155

Query: 145 LAQMPQP-PMFDHNSLDGIFNIGSPQSYHQSYSHLIEDSNILEPLWT 191
           LAQ P P P  DH SLD  FNI +PQSY Q+Y+  +EDSNI EPLWT
Sbjct: 156 LAQTPPPVPPPDHRSLDNNFNIATPQSY-QNYTPFLEDSNIWEPLWT 201

BLAST of Lcy10g003490 vs. ExPASy TrEMBL
Match: A0A5D3CPB0 (LOB domain-containing protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold769G00420 PE=3 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 1.6e-63
Identity = 133/183 (72.68%), Postives = 146/183 (79.78%), Query Frame = 0

Query: 14  MEKSEANMAAAVSPCAACKILRRRCRENCVLGPYFPPNEPLKFTIAHRVFGASNIIKLLQ 73
           ME  EA     VSPCAACKILRRRC E CVL PYFPP++PLKFTIAHR+FGASNIIKLL 
Sbjct: 1   MESREA--PVVVSPCAACKILRRRCAEKCVLAPYFPPSDPLKFTIAHRIFGASNIIKLLL 60

Query: 74  DLPKSQRADAVNSMVYEASARIRDPVYGSTGSIFQLQRQINELQAELAKAQAELLNMQCQ 133
           DLP SQRADAV+S+VYEASARIRDPVYG  G+I QLQ+QINELQAELAK QAEL+N+ C 
Sbjct: 61  DLPDSQRADAVSSLVYEASARIRDPVYGCAGAICQLQKQINELQAELAKTQAELVNIHCH 120

Query: 134 QANLVSLICKELAQMPQPPMF------DHNSLDGIFNIGSPQSYHQSYSHLIEDSNILEP 191
           Q NLV+LICKELAQ P PPM       DH SLD  FNI +PQSY Q Y+ L EDSNI +P
Sbjct: 121 QTNLVALICKELAQTP-PPMSSLSLLPDHRSLDNNFNIATPQSY-QGYTSLFEDSNIWDP 179

BLAST of Lcy10g003490 vs. NCBI nr
Match: XP_038893916.1 (LOB domain-containing protein 1 [Benincasa hispida])

HSP 1 Score: 300.8 bits (769), Expect = 8.2e-78
Identity = 151/180 (83.89%), Postives = 161/180 (89.44%), Query Frame = 0

Query: 14  MEKSEANMAA---AVSPCAACKILRRRCRENCVLGPYFPPNEPLKFTIAHRVFGASNIIK 73
           MEKSE N AA   AVSPCAACKILRRRCRENC LGPYFPP EPLKFTIAHR+FGASNIIK
Sbjct: 1   MEKSEPNTAAATTAVSPCAACKILRRRCRENCELGPYFPPTEPLKFTIAHRIFGASNIIK 60

Query: 74  LLQDLPKSQRADAVNSMVYEASARIRDPVYGSTGSIFQLQRQINELQAELAKAQAELLNM 133
           LLQDLPKSQR DAVNSMVYEASARIRDP+YG  GSIFQLQRQIN+LQ ELAKAQAE+L M
Sbjct: 61  LLQDLPKSQREDAVNSMVYEASARIRDPIYGCAGSIFQLQRQINDLQGELAKAQAEILKM 120

Query: 134 QCQQANLVSLICKELAQMPQPPMFDHNSLDGIFNIGSPQSYHQSYSHLIEDSNILEPLWT 191
           QCQQANL++LICKELAQMPQPPM+DH SL+  +NI SPQSYH S S+L EDSNILEPLWT
Sbjct: 121 QCQQANLMTLICKELAQMPQPPMYDHQSLNDNYNIASPQSYHSS-SYLFEDSNILEPLWT 179

BLAST of Lcy10g003490 vs. NCBI nr
Match: XP_008463578.1 (PREDICTED: LOB domain-containing protein 1-like [Cucumis melo] >KAA0051930.1 LOB domain-containing protein 1-like [Cucumis melo var. makuwa] >TYK12232.1 LOB domain-containing protein 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 271.2 bits (692), Expect = 6.9e-69
Identity = 141/184 (76.63%), Postives = 155/184 (84.24%), Query Frame = 0

Query: 14  MEKS-EANMAAAV------SPCAACKILRRRCRENCVLGPYFPPNEPLKFTIAHRVFGAS 73
           M+KS EAN A+AV       PCAACKILRRRCRENC LGPYFPP EPLKFTIAHRVFGAS
Sbjct: 1   MKKSEEANTASAVVVMGSTQPCAACKILRRRCRENCELGPYFPPMEPLKFTIAHRVFGAS 60

Query: 74  NIIKLLQDLPKSQRADAVNSMVYEASARIRDPVYGSTGSIFQLQRQINELQAELAKAQAE 133
           NIIKLLQ+LPKSQRADAVNSMVYEASARIRDP+YG  GSIF LQRQIN+LQ ELAKAQAE
Sbjct: 61  NIIKLLQNLPKSQRADAVNSMVYEASARIRDPIYGCAGSIFHLQRQINDLQIELAKAQAE 120

Query: 134 LLNMQCQQANLVSLICKELAQMPQPPMFDHNSLDGIFNIGSPQSYHQSYSHLIEDSNILE 191
           +L M CQQANL++LICKEL QMP+PPM DH      +NI SPQ Y+ SYS+L E+SN+LE
Sbjct: 121 VLRMHCQQANLMTLICKELGQMPEPPMHDH------YNIASPQGYY-SYSYLFEESNVLE 177

BLAST of Lcy10g003490 vs. NCBI nr
Match: XP_004147298.1 (LOB domain-containing protein 1 [Cucumis sativus] >KGN64754.1 hypothetical protein Csa_014184 [Cucumis sativus])

HSP 1 Score: 270.4 bits (690), Expect = 1.2e-68
Identity = 136/181 (75.14%), Postives = 151/181 (83.43%), Query Frame = 0

Query: 10  SAAEMEKSEANMAAAVSPCAACKILRRRCRENCVLGPYFPPNEPLKFTIAHRVFGASNII 69
           SA     S A +  + SPCAACKILRRRCRENC LGPYFP  EPLKFTIAHRVFGASNII
Sbjct: 4   SAETNTASTAVVVGSSSPCAACKILRRRCRENCELGPYFPSMEPLKFTIAHRVFGASNII 63

Query: 70  KLLQDLPKSQRADAVNSMVYEASARIRDPVYGSTGSIFQLQRQINELQAELAKAQAELLN 129
           KLLQDLP+SQR DAVNSMVYEASARIRDP+YG  GSIF LQRQIN+LQ ELAKAQAE+L 
Sbjct: 64  KLLQDLPESQRGDAVNSMVYEASARIRDPIYGCAGSIFHLQRQINDLQGELAKAQAEVLR 123

Query: 130 MQCQQANLVSLICKELAQMPQPPMFDHNSLDGIFNIGSPQSYHQSYSHLIEDSNILEPLW 189
           M CQQANL++LI KEL Q+PQPPM DH SL+  +NI SPQSYH SYS+L E+ N+LEP+W
Sbjct: 124 MHCQQANLMTLIWKELGQVPQPPMHDHQSLNDPYNIASPQSYH-SYSYLFEECNVLEPMW 183

Query: 190 T 191
           T
Sbjct: 184 T 183

BLAST of Lcy10g003490 vs. NCBI nr
Match: XP_022157927.1 (LOB domain-containing protein 11-like [Momordica charantia])

HSP 1 Score: 258.5 bits (659), Expect = 4.7e-65
Identity = 130/167 (77.84%), Postives = 144/167 (86.23%), Query Frame = 0

Query: 25  VSPCAACKILRRRCRENCVLGPYFPPNEPLKFTIAHRVFGASNIIKLLQDLPKSQRADAV 84
           VSPCAACKILRRRC E CVL PYFPP++P KFTIAHRVFGASNIIKLLQDLP+SQRADAV
Sbjct: 36  VSPCAACKILRRRCAEKCVLAPYFPPSDPFKFTIAHRVFGASNIIKLLQDLPESQRADAV 95

Query: 85  NSMVYEASARIRDPVYGSTGSIFQLQRQINELQAELAKAQAELLNMQCQQANLVSLICKE 144
           +S+VYEASARIRDPVYG  G+I QLQ+QINELQAELAK QAEL+NM C QA+LV+LICKE
Sbjct: 96  SSLVYEASARIRDPVYGCAGAICQLQKQINELQAELAKTQAELVNMHCHQASLVALICKE 155

Query: 145 LAQMPQP-PMFDHNSLDGIFNIGSPQSYHQSYSHLIEDSNILEPLWT 191
           LAQ P P P  DH SLD  FNI +PQSY Q+Y+  +EDSNI EPLWT
Sbjct: 156 LAQTPPPVPPPDHRSLDNNFNIATPQSY-QNYTPFLEDSNIWEPLWT 201

BLAST of Lcy10g003490 vs. NCBI nr
Match: XP_038895012.1 (LOB domain-containing protein 1-like [Benincasa hispida])

HSP 1 Score: 258.5 bits (659), Expect = 4.7e-65
Identity = 132/188 (70.21%), Postives = 152/188 (80.85%), Query Frame = 0

Query: 5   LSATLSAAEMEKSEANMAAAVSPCAACKILRRRCRENCVLGPYFPPNEPLKFTIAHRVFG 64
           LS + S++            VSPCAACKILRRRC E CVL PYFPP++PLKFTIAHRVFG
Sbjct: 16  LSQSPSSSPSPPPSIQTGVVVSPCAACKILRRRCAEKCVLAPYFPPSDPLKFTIAHRVFG 75

Query: 65  ASNIIKLLQDLPKSQRADAVNSMVYEASARIRDPVYGSTGSIFQLQRQINELQAELAKAQ 124
           ASNIIKLLQDLP+SQRADAV+S+VYEA+ARIRDPVYG  G+I QLQ+QINELQAELAK Q
Sbjct: 76  ASNIIKLLQDLPESQRADAVSSLVYEANARIRDPVYGCAGAICQLQKQINELQAELAKTQ 135

Query: 125 AELLNMQCQQANLVSLICKELAQMPQP--PMFDHNSLDGIFNIGSPQSYHQSYSHLIEDS 184
           AEL+N+ C+QANLV+LICKEL Q+P P  P+ DH SLD  FNI +PQSY Q Y+ L EDS
Sbjct: 136 AELVNIHCRQANLVALICKELTQLPPPMSPLPDHRSLDNNFNIATPQSY-QGYTSLFEDS 195

Query: 185 NILEPLWT 191
           NI +PLWT
Sbjct: 196 NIWDPLWT 202

BLAST of Lcy10g003490 vs. TAIR 10
Match: AT1G07900.1 (LOB domain-containing protein 1 )

HSP 1 Score: 185.7 bits (470), Expect = 3.6e-47
Identity = 90/133 (67.67%), Postives = 108/133 (81.20%), Query Frame = 0

Query: 9   LSAAEMEKSEANMAAAVSPCAACKILRRRCRENCVLGPYFPPNEPLKFTIAHRVFGASNI 68
           +S++       +    +SPCAACKILRRRC E CVL PYFPP +P KFTIAHRVFGASNI
Sbjct: 15  ISSSSSPPPSLSPRVVLSPCAACKILRRRCAERCVLAPYFPPTDPAKFTIAHRVFGASNI 74

Query: 69  IKLLQDLPKSQRADAVNSMVYEASARIRDPVYGSTGSIFQLQRQINELQAELAKAQAELL 128
           IK LQ+LP+SQR DAVNSMVYEA ARIRDPVYG  G+I+ LQRQ++ELQA+LAKAQ E++
Sbjct: 75  IKFLQELPESQRTDAVNSMVYEAEARIRDPVYGCAGAIYHLQRQVSELQAQLAKAQVEMV 134

Query: 129 NMQCQQANLVSLI 142
           NMQ Q++NL+ LI
Sbjct: 135 NMQFQRSNLLELI 147

BLAST of Lcy10g003490 vs. TAIR 10
Match: AT2G28500.1 (LOB domain-containing protein 11 )

HSP 1 Score: 183.0 bits (463), Expect = 2.3e-46
Identity = 98/180 (54.44%), Postives = 120/180 (66.67%), Query Frame = 0

Query: 25  VSPCAACKILRRRCRENCVLGPYFPPNEPLKFTIAHRVFGASNIIKLLQDLPKSQRADAV 84
           +SPCAACKILRRRC + CVL PYFPP +P KFTIAHRVFGASNIIK LQ+LP+SQR DAV
Sbjct: 53  LSPCAACKILRRRCADKCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQELPESQRTDAV 112

Query: 85  NSMVYEASARIRDPVYGSTGSIFQLQRQINELQAELAKAQAELLNMQCQQANLVSLI--- 144
           NSMVYEA AR+RDPVYG  G+I+ LQRQ++ELQA+LAK Q EL+ MQ Q+++L+ LI   
Sbjct: 113 NSMVYEAGARMRDPVYGCAGAIYHLQRQVSELQAQLAKTQVELVGMQLQRSSLLELIYNM 172

Query: 145 ----CKELAQMPQPPMFDHNSLDGIFNIGSPQSYHQSYSHLIEDSN-------ILEPLWT 191
                    Q  Q   F+ +   G   I SP         L +++N         +PLWT
Sbjct: 173 EQTKLSVQEQGQQKMSFESSFESGDEFISSPDEESNDLGFLEDNNNNNNSSMSWWDPLWT 232

BLAST of Lcy10g003490 vs. TAIR 10
Match: AT1G31320.1 (LOB domain-containing protein 4 )

HSP 1 Score: 151.4 bits (381), Expect = 7.5e-37
Identity = 81/179 (45.25%), Postives = 115/179 (64.25%), Query Frame = 0

Query: 16  KSEANMAAAVSPCAACKILRRRCRENCVLGPYFPPNEPLKFTIAHRVFGASNIIKLLQDL 75
           K  +    A SPCAACK+LRRRC ++CV  PYFP +EP KF   HRVFGASN+ K+LQ+L
Sbjct: 2   KESSRKQGAASPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQEL 61

Query: 76  PKSQRADAVNSMVYEASARIRDPVYGSTGSIFQLQRQINELQAELAKAQAELLNMQCQQA 135
           P  QR DAV+SMVYEA+AR+RDPVYG  G+I  LQ+QI+ LQA+LA AQAE+++++ +Q+
Sbjct: 62  PIHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRQS 121

Query: 136 NLV--SLICKELAQMPQPPMFDHNSLDGIFNIGSPQSYHQSYSH--LIEDSNILEPLWT 191
                  +C +       P              SPQ     +SH  +++++++ E +W+
Sbjct: 122 TNFPGHGLCPDSPSSSGSPSSKQ---------VSPQDNKGMFSHMDIVDEASLGESMWS 171

BLAST of Lcy10g003490 vs. TAIR 10
Match: AT2G30130.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 151.0 bits (380), Expect = 9.7e-37
Identity = 68/108 (62.96%), Postives = 90/108 (83.33%), Query Frame = 0

Query: 26  SPCAACKILRRRCRENCVLGPYFPPNEPLKFTIAHRVFGASNIIKLLQDLPKSQRADAVN 85
           SPCA+CK+LRRRC ++C+  PYFPP++P KF I H+VFGASN+ K+LQ+LP  QRADAVN
Sbjct: 7   SPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVN 66

Query: 86  SMVYEASARIRDPVYGSTGSIFQLQRQINELQAELAKAQAELLNMQCQ 134
           S+V+EA+AR+RDPVYG  G+I  LQ Q+++LQ +LA AQAE+L +Q Q
Sbjct: 67  SLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQ 114

BLAST of Lcy10g003490 vs. TAIR 10
Match: AT2G40470.1 (LOB domain-containing protein 15 )

HSP 1 Score: 139.0 bits (349), Expect = 3.8e-33
Identity = 62/111 (55.86%), Postives = 85/111 (76.58%), Query Frame = 0

Query: 25  VSPCAACKILRRRCRENCVLGPYFPPNEPLKFTIAHRVFGASNIIKLLQDLPKSQRADAV 84
           ++PCAACK+LRRRC + C   PYF P+EP KF   H+VFGASN+ K+L ++P+SQRADA 
Sbjct: 43  ITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPESQRADAA 102

Query: 85  NSMVYEASARIRDPVYGSTGSIFQLQRQINELQAELAKAQAELLNMQCQQA 136
           NS+VYEA+ R+RDPVYG  G+I  LQ+Q+  LQAEL   ++E+L  + ++A
Sbjct: 103 NSLVYEANVRLRDPVYGCMGAISALQQQVQALQAELTAVRSEILKYKQREA 153

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9LQR05.0e-4667.67LOB domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=LBD1 PE=2 SV=... [more]
Q9SK083.3e-4554.44LOB domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=LBD11 PE=2 S... [more]
Q9SHE91.1e-3545.25LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=... [more]
Q8LBW31.4e-3562.96LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 S... [more]
Q8L5T55.4e-3255.86LOB domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=LBD15 PE=1 S... [more]
Match NameE-valueIdentityDescription
A0A5D3CLP63.4e-6976.63LOB domain-containing protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E... [more]
A0A1S3CK313.4e-6976.63LOB domain-containing protein 1-like OS=Cucumis melo OX=3656 GN=LOC103501684 PE=... [more]
A0A0A0LUS45.7e-6975.14LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G088440 PE=3 SV... [more]
A0A6J1DVT72.3e-6577.84LOB domain-containing protein 11-like OS=Momordica charantia OX=3673 GN=LOC11102... [more]
A0A5D3CPB01.6e-6372.68LOB domain-containing protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E... [more]
Match NameE-valueIdentityDescription
XP_038893916.18.2e-7883.89LOB domain-containing protein 1 [Benincasa hispida][more]
XP_008463578.16.9e-6976.63PREDICTED: LOB domain-containing protein 1-like [Cucumis melo] >KAA0051930.1 LOB... [more]
XP_004147298.11.2e-6875.14LOB domain-containing protein 1 [Cucumis sativus] >KGN64754.1 hypothetical prote... [more]
XP_022157927.14.7e-6577.84LOB domain-containing protein 11-like [Momordica charantia][more]
XP_038895012.14.7e-6570.21LOB domain-containing protein 1-like [Benincasa hispida][more]
Match NameE-valueIdentityDescription
AT1G07900.13.6e-4767.67LOB domain-containing protein 1 [more]
AT2G28500.12.3e-4654.44LOB domain-containing protein 11 [more]
AT1G31320.17.5e-3745.25LOB domain-containing protein 4 [more]
AT2G30130.19.7e-3762.96Lateral organ boundaries (LOB) domain family protein [more]
AT2G40470.13.8e-3355.86LOB domain-containing protein 15 [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 106..133
NoneNo IPR availablePANTHERPTHR31301LOB DOMAIN-CONTAINING PROTEIN 4-RELATEDcoord: 18..189
NoneNo IPR availablePANTHERPTHR31301:SF137LOB DOMAIN-CONTAINING PROTEIN 1coord: 18..189
IPR004883Lateral organ boundaries, LOBPFAMPF03195LOBcoord: 27..124
e-value: 1.1E-39
score: 134.9
IPR004883Lateral organ boundaries, LOBPROSITEPS50891LOBcoord: 26..127
score: 25.944841

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy10g003490.1Lcy10g003490.1mRNA