Lcy10g002810 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTCTTCCCCTTCCCCTTCCCCTCCCCCAAGAAATCGATTACATCAAAGAATCAATAGACCAGACTATGGGCATCCCTTTCTGCACGGAGACTCTGGAATTGAAACTCTTCGCCTCCGAAGCCCCGCGCCAACGCCTCGAAGCCCAATGCCTCTCTTTGCAGTCTAAATTAAACCAACAAATTGTCTCTACTAAAACTGCCACAGTCTGTATTTTGCTACCTTTCTTTTTATCTCCATTGATCTTGATATGTTTCAGAGATTCATTACGTTGTTTTGGTTCAGGCGGAAGCGAAGTTGAGTGCGCAGAGCCTGAAGAAAGTCATCGAGAAAAACGAACAATTGAGGGAAGAGAATTGGGGTTTGGTGGAGCAATGCAAGAAAATGAAAGCCATCGCCAACAGAGGGAAATCCGCCGTCAATCGCGCCAAGGAAGCGGAAGCTCGCGTGCGTGAGTTGGAAGACGAGGTCAAAGGATTGACAGAGGAATTGAATTTCTTCAAGGATCAATACCGAATGCGAAAGGTACAACCCTCAGTCATTCTTGAATCTTTCTGGGCTCTTTTTAATCAAAATCAAAATAAAAAATCTCTCATTTTCTTCTTCGCAGTTTTATTCTGCTTCCATGGAGGAGGTTCTGGTCAAGTCGGCCTTAGGAGATTTAAATGGAGAAACAGAGTCGTCGGTTGGCGAGTTCTTGTTGACAAATATCGGGCACGAATCGTGTCGAAGGCTTCTACATTTGTCGCAAAGGTAAAAATTATTCCAATTCTCACTTCTGCCATTTTGAGATTGGATGGATTATAACTCCGAAAATGACCAATGTAGTTTTAGACCTTCAACTCTGAGAGCTCTGTCTCTGGCGGCTAAAATCAAGGCTCTCGAGGAAAACAAGCAAAAACTCGAGATCCTCCTCAAGTTGTTGTCGGATCAAATCGGTTATCCTTCCTCTGTGAAGGTTAAGAAAAATAGATAA ATGAGTCTTCCCCTTCCCCTTCCCCTCCCCCAAGAAATCGATTACATCAAAGAATCAATAGACCAGACTATGGGCATCCCTTTCTGCACGGAGACTCTGGAATTGAAACTCTTCGCCTCCGAAGCCCCGCGCCAACGCCTCGAAGCCCAATGCCTCTCTTTGCAGTCTAAATTAAACCAACAAATTGTCTCTACTAAAACTGCCACAGCGGAAGCGAAGTTGAGTGCGCAGAGCCTGAAGAAAGTCATCGAGAAAAACGAACAATTGAGGGAAGAGAATTGGGGTTTGGTGGAGCAATGCAAGAAAATGAAAGCCATCGCCAACAGAGGGAAATCCGCCGTCAATCGCGCCAAGGAAGCGGAAGCTCGCGTGCGTGAGTTGGAAGACGAGGTCAAAGGATTGACAGAGGAATTGAATTTCTTCAAGGATCAATACCGAATGCGAAAGTTTTATTCTGCTTCCATGGAGGAGGTTCTGGTCAAGTCGGCCTTAGGAGATTTAAATGGAGAAACAGAGTCGTCGGTTGGCGAGTTCTTGTTGACAAATATCGGGCACGAATCGTGTCGAAGGCTTCTACATTTGTCGCAAAGTTTTAGACCTTCAACTCTGAGAGCTCTGTCTCTGGCGGCTAAAATCAAGGCTCTCGAGGAAAACAAGCAAAAACTCGAGATCCTCCTCAAGTTGTTGTCGGATCAAATCGGTTATCCTTCCTCTGTGAAGGTTAAGAAAAATAGATAA ATGAGTCTTCCCCTTCCCCTTCCCCTCCCCCAAGAAATCGATTACATCAAAGAATCAATAGACCAGACTATGGGCATCCCTTTCTGCACGGAGACTCTGGAATTGAAACTCTTCGCCTCCGAAGCCCCGCGCCAACGCCTCGAAGCCCAATGCCTCTCTTTGCAGTCTAAATTAAACCAACAAATTGTCTCTACTAAAACTGCCACAGCGGAAGCGAAGTTGAGTGCGCAGAGCCTGAAGAAAGTCATCGAGAAAAACGAACAATTGAGGGAAGAGAATTGGGGTTTGGTGGAGCAATGCAAGAAAATGAAAGCCATCGCCAACAGAGGGAAATCCGCCGTCAATCGCGCCAAGGAAGCGGAAGCTCGCGTGCGTGAGTTGGAAGACGAGGTCAAAGGATTGACAGAGGAATTGAATTTCTTCAAGGATCAATACCGAATGCGAAAGTTTTATTCTGCTTCCATGGAGGAGGTTCTGGTCAAGTCGGCCTTAGGAGATTTAAATGGAGAAACAGAGTCGTCGGTTGGCGAGTTCTTGTTGACAAATATCGGGCACGAATCGTGTCGAAGGCTTCTACATTTGTCGCAAAGTTTTAGACCTTCAACTCTGAGAGCTCTGTCTCTGGCGGCTAAAATCAAGGCTCTCGAGGAAAACAAGCAAAAACTCGAGATCCTCCTCAAGTTGTTGTCGGATCAAATCGGTTATCCTTCCTCTGTGAAGGTTAAGAAAAATAGATAA MSLPLPLPLPQEIDYIKESIDQTMGIPFCTETLELKLFASEAPRQRLEAQCLSLQSKLNQQIVSTKTATAEAKLSAQSLKKVIEKNEQLREENWGLVEQCKKMKAIANRGKSAVNRAKEAEARVRELEDEVKGLTEELNFFKDQYRMRKFYSASMEEVLVKSALGDLNGETESSVGEFLLTNIGHESCRRLLHLSQSFRPSTLRALSLAAKIKALEENKQKLEILLKLLSDQIGYPSSVKVKKNR Homology
BLAST of Lcy10g002810 vs. ExPASy TrEMBL
Match: A0A6J1BRI9 (uncharacterized protein LOC111004753 OS=Momordica charantia OX=3673 GN=LOC111004753 PE=4 SV=1) HSP 1 Score: 241.1 bits (614), Expect = 4.8e-60 Identity = 140/235 (59.57%), Postives = 174/235 (74.04%), Query Frame = 0
BLAST of Lcy10g002810 vs. ExPASy TrEMBL
Match: A0A6J1GIQ2 (uncharacterized protein LOC111454550 OS=Cucurbita moschata OX=3662 GN=LOC111454550 PE=4 SV=1) HSP 1 Score: 172.2 bits (435), Expect = 2.7e-39 Identity = 101/169 (59.76%), Postives = 129/169 (76.33%), Query Frame = 0
BLAST of Lcy10g002810 vs. ExPASy TrEMBL
Match: A0A2N9IYL3 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS58309 PE=4 SV=1) HSP 1 Score: 156.8 bits (395), Expect = 1.2e-34 Identity = 103/244 (42.21%), Postives = 151/244 (61.89%), Query Frame = 0
BLAST of Lcy10g002810 vs. ExPASy TrEMBL
Match: A0A2P6PHG7 (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr7g0238321 PE=4 SV=1) HSP 1 Score: 156.0 bits (393), Expect = 2.0e-34 Identity = 101/232 (43.53%), Postives = 145/232 (62.50%), Query Frame = 0
BLAST of Lcy10g002810 vs. ExPASy TrEMBL
Match: A0A1Q3CT80 (Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_26696 PE=4 SV=1) HSP 1 Score: 155.6 bits (392), Expect = 2.7e-34 Identity = 103/245 (42.04%), Postives = 152/245 (62.04%), Query Frame = 0
BLAST of Lcy10g002810 vs. NCBI nr
Match: KAG6585310.1 (hypothetical protein SDJN03_18043, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 258.8 bits (660), Expect = 4.6e-65 Identity = 150/235 (63.83%), Postives = 184/235 (78.30%), Query Frame = 0
BLAST of Lcy10g002810 vs. NCBI nr
Match: KAG7020228.1 (hypothetical protein SDJN02_16911, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 257.3 bits (656), Expect = 1.3e-64 Identity = 148/228 (64.91%), Postives = 180/228 (78.95%), Query Frame = 0
BLAST of Lcy10g002810 vs. NCBI nr
Match: XP_022131622.1 (uncharacterized protein LOC111004753 [Momordica charantia]) HSP 1 Score: 241.1 bits (614), Expect = 9.9e-60 Identity = 140/235 (59.57%), Postives = 174/235 (74.04%), Query Frame = 0
BLAST of Lcy10g002810 vs. NCBI nr
Match: XP_038885825.1 (uncharacterized protein LOC120076121 [Benincasa hispida]) HSP 1 Score: 191.4 bits (485), Expect = 9.0e-45 Identity = 117/212 (55.19%), Postives = 149/212 (70.28%), Query Frame = 0
BLAST of Lcy10g002810 vs. NCBI nr
Match: XP_023538594.1 (uncharacterized protein LOC111799313 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 173.7 bits (439), Expect = 1.9e-39 Identity = 101/169 (59.76%), Postives = 131/169 (77.51%), Query Frame = 0
BLAST of Lcy10g002810 vs. TAIR 10
Match: AT4G09060.1 (unknown protein; LOCATED IN: membrane; EXPRESSED IN: leaf; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G14680.1); Has 8168 Blast hits to 6036 proteins in 601 species: Archae - 151; Bacteria - 570; Metazoa - 4684; Fungi - 544; Plants - 345; Viruses - 91; Other Eukaryotes - 1783 (source: NCBI BLink). ) HSP 1 Score: 125.9 bits (315), Expect = 4.3e-29 Identity = 88/252 (34.92%), Postives = 145/252 (57.54%), Query Frame = 0
BLAST of Lcy10g002810 vs. TAIR 10
Match: AT4G09060.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G14680.1). ) HSP 1 Score: 118.6 bits (296), Expect = 6.9e-27 Identity = 90/278 (32.37%), Postives = 146/278 (52.52%), Query Frame = 0
BLAST of Lcy10g002810 vs. TAIR 10
Match: AT1G14680.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G09060.1); Has 8132 Blast hits to 6366 proteins in 685 species: Archae - 171; Bacteria - 671; Metazoa - 4046; Fungi - 445; Plants - 318; Viruses - 23; Other Eukaryotes - 2458 (source: NCBI BLink). ) HSP 1 Score: 107.1 bits (266), Expect = 2.1e-23 Identity = 83/248 (33.47%), Postives = 134/248 (54.03%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
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