Lcy10g001270 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy10g001270
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Copper transporter
Location	Chr10: 1506131 .. 1506862 (-)
RNA-Seq Expression	Lcy10g001270
Synteny	Lcy10g001270

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAACCATTTTCCCGAGAAAAATGGAAACCCACATGACATTTTTCTGGGGAAAGACGGCGGAGATTCTCTTCTCCGGCTGGCCTGGCCGGAGCTTTTTTTCTTACGCCGTCGCCTTGATCTTCGTCTTTCTCGTCGCCTTCACCGTGGAGTGGCTCTCTCACACTAAACTCACCGCCTCCACCACCGGAAATGTCGCCGCTGGCCTGGTTCAGACCGCCCTGTACGGCGTCCGGGTCGGGCTGGCTTTTGTCATCATGCTGGCCGTCATGTCGTTTAATGTTGGAGTTCTCCTCGCGGCGGTGGCCGGATATTCGGTCGGGTTCTTGGTTTATGGGAGTCGGGTTTTTGACGGATCTAAAATTGACTCGAATTTGGATCCGTCTGATCTACCACCATTCAATTGTTGATAGGGAAGATCAAATCATCCACCATTAGAATGGTAATATGTGTTCGACGAATTAGTCTATTTTTGTTGATTATTAGCAATAAAGTCTTTTGCTATGTATAATCATCCCAACTTTTGGGTTTTATTTTCAAAAGTGGTTGATGATCTATTTAGGTTTAGTTATTTTTATGTTTAAAAGAAAAAAAAAATTGTTCATGTATTTCGATACATATTTTTATCCTTCTTATAGGAAAACTAGAATACTAACCAAAACCAGATCAAATCACTCGAAAAACCGACTAAACGGATGTCTTAAGTTTGATTTTGAGGGAAGTGAAGTTAA

mRNA sequence

AAAAAAACCATTTTCCCGAGAAAAATGGAAACCCACATGACATTTTTCTGGGGAAAGACGGCGGAGATTCTCTTCTCCGGCTGGCCTGGCCGGAGCTTTTTTTCTTACGCCGTCGCCTTGATCTTCGTCTTTCTCGTCGCCTTCACCGTGGAGTGGCTCTCTCACACTAAACTCACCGCCTCCACCACCGGAAATGTCGCCGCTGGCCTGGTTCAGACCGCCCTGTACGGCGTCCGGGTCGGGCTGGCTTTTGTCATCATGCTGGCCGTCATGTCGTTTAATGTTGGAGTTCTCCTCGCGGCGGTGGCCGGATATTCGGTCGGGTTCTTGGTTTATGGGAGTCGGGTTTTTGACGGATCTAAAATTGACTCGAATTTGGATCCGTCTGATCTACCACCATTCAATTGTTGATAGGGAAGATCAAATCATCCACCATTAGAATGGTAATATGTGTTCGACGAATTAGTCTATTTTTGTTGATTATTAGCAATAAAGTCTTTTGCTATGTATAATCATCCCAACTTTTGGGTTTTATTTTCAAAAGTGGTTGATGATCTATTTAGGTTTAGTTATTTTTATGTTTAAAAGAAAAAAAAAATTGTTCATGTATTTCGATACATATTTTTATCCTTCTTATAGGAAAACTAGAATACTAACCAAAACCAGATCAAATCACTCGAAAAACCGACTAAACGGATGTCTTAAGTTTGATTTTGAGGGAAGTGAAGTTAA

Coding sequence (CDS)

ATGGAAACCCACATGACATTTTTCTGGGGAAAGACGGCGGAGATTCTCTTCTCCGGCTGGCCTGGCCGGAGCTTTTTTTCTTACGCCGTCGCCTTGATCTTCGTCTTTCTCGTCGCCTTCACCGTGGAGTGGCTCTCTCACACTAAACTCACCGCCTCCACCACCGGAAATGTCGCCGCTGGCCTGGTTCAGACCGCCCTGTACGGCGTCCGGGTCGGGCTGGCTTTTGTCATCATGCTGGCCGTCATGTCGTTTAATGTTGGAGTTCTCCTCGCGGCGGTGGCCGGATATTCGGTCGGGTTCTTGGTTTATGGGAGTCGGGTTTTTGACGGATCTAAAATTGACTCGAATTTGGATCCGTCTGATCTACCACCATTCAATTGTTGA

Protein sequence

METHMTFFWGKTAEILFSGWPGRSFFSYAVALIFVFLVAFTVEWLSHTKLTASTTGNVAAGLVQTALYGVRVGLAFVIMLAVMSFNVGVLLAAVAGYSVGFLVYGSRVFDGSKIDSNLDPSDLPPFNC

Homology

[Close]

BLAST of Lcy10g001270 vs. ExPASy Swiss-Prot
Match: Q39065 (Copper transporter 1 OS=Arabidopsis thaliana OX=3702 GN=COPT1 PE=2 SV=2)

HSP 1 Score: 134.8 bits (338), Expect = 6.9e-31
Identity = 70/131 (53.44%), Postives = 93/131 (70.99%), Query Frame = 0


Query: 1   METHMTFFWGKTAEILFSGWPGRSFFSYAVALIFVFLVAFTVEWLSHTKLTASTTG---N 60
           M  HMTFFWGK  E+LFSGWPG S   YA+ LIFVF +A   EWL+H+ L   +TG   N
Sbjct: 40  MMMHMTFFWGKNTEVLFSGWPGTSSGMYALCLIFVFFLAVLTEWLAHSSLLRGSTGDSAN 99

Query: 61  VAAGLVQTALYGVRVGLAFVIMLAVMSFNVGVLLAAVAGYSVGFLVYGSRVFDGSKIDSN 120
            AAGL+QTA+Y +R+GLA+++MLAVMSFN GV L A+AG++VGF+++GS+ F  +  D  
Sbjct: 100 RAAGLIQTAVYTLRIGLAYLVMLAVMSFNAGVFLVALAGHAVGFMLFGSQTFRNTSDDRK 159

Query: 121 LDPSDLPPFNC 129
              + +PP  C
Sbjct: 160 --TNYVPPSGC 168

[Close]

BLAST of Lcy10g001270 vs. ExPASy Swiss-Prot
Match: Q9STG2 (Copper transporter 2 OS=Arabidopsis thaliana OX=3702 GN=COPT2 PE=2 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 1.6e-27
Identity = 67/126 (53.17%), Postives = 85/126 (67.46%), Query Frame = 0


Query: 1   METHMTFFWGKTAEILFSGWPGRSFFSYAVALIFVFLVAFTVEWLSHTK-LTASTTGNVA 60
           M  HMTFFWGK  E+LFSGWPG S   YA+ LI +FL+A   EWL+H+  L  S + N A
Sbjct: 28  MMMHMTFFWGKNTEVLFSGWPGTSSGMYALCLIVIFLLAVIAEWLAHSPILRVSGSTNRA 87

Query: 61  AGLVQTALYGVRVGLAFVIMLAVMSFNVGVLLAAVAGYSVGFLVYGSRVF----DGSKID 120
           AGL QTA+Y ++ GL++++MLAVMSFN GV + A+AGY VGF ++GS  F    D  K  
Sbjct: 88  AGLAQTAVYTLKTGLSYLVMLAVMSFNAGVFIVAIAGYGVGFFLFGSTTFKKPSDDQKTA 147

Query: 121 SNLDPS 122
             L PS
Sbjct: 148 ELLPPS 153

[Close]

BLAST of Lcy10g001270 vs. ExPASy Swiss-Prot
Match: Q8GWP3 (Copper transporter 6 OS=Arabidopsis thaliana OX=3702 GN=COPT6 PE=2 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 5.1e-26
Identity = 62/113 (54.87%), Postives = 81/113 (71.68%), Query Frame = 0


Query: 4   HMTFFWGKTAEILFSGWPGRSFFSYAVALIFVFLVAFTVEWLSHTK-LTASTTGNVAAGL 63
           HMTFFWGK  EILFSGWPG S   Y + LI VFL+A  VEWL+H+  L    + + A GL
Sbjct: 26  HMTFFWGKNTEILFSGWPGTSLGMYVLCLIVVFLLAVIVEWLAHSSILRGRGSTSRAKGL 85

Query: 64  VQTALYGVRVGLAFVIMLAVMSFNVGVLLAAVAGYSVGFLVYGSRVFDGSKID 116
           VQTA+Y ++ GLA+++MLAVMSFN GV + A+AG++VGF+++GS  F     D
Sbjct: 86  VQTAVYTLKTGLAYLVMLAVMSFNGGVFIVAIAGFAVGFMLFGSTAFKNPSDD 138

[Close]

BLAST of Lcy10g001270 vs. ExPASy Swiss-Prot
Match: Q9FGU8 (Copper transporter 3 OS=Arabidopsis thaliana OX=3702 GN=COPT3 PE=2 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 3.1e-23
Identity = 55/116 (47.41%), Postives = 79/116 (68.10%), Query Frame = 0


Query: 4   HMTFFWGKTAEILFSGWPGRSFFSYAVALIFVFLVAFTVEWLSHTKLTASTTGNVAAGLV 63
           HMTFFWGKT E+LF GWPG S   Y V L  +F+++   E LS      S   ++  GL+
Sbjct: 31  HMTFFWGKTTEVLFDGWPGTSLKMYWVCLAVIFVISAFSECLSRCGFMKSGPASLGGGLL 90

Query: 64  QTALYGVRVGLAFVIMLAVMSFNVGVLLAAVAGYSVGFLVYGSRVFDGSKIDSNLD 120
           QTA+Y VR  L++++MLAVMSFN GV +AA+AG+ +GF+++GSR F  +  +S+ +
Sbjct: 91  QTAVYTVRAALSYLVMLAVMSFNGGVFVAAMAGFGLGFMIFGSRAFRATSSNSHTE 146

[Close]

BLAST of Lcy10g001270 vs. ExPASy Swiss-Prot
Match: Q5ZD08 (Copper transporter 3 OS=Oryza sativa subsp. japonica OX=39947 GN=COPT3 PE=2 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 1.9e-20
Identity = 57/119 (47.90%), Postives = 81/119 (68.07%), Query Frame = 0


Query: 4   HMTFFWGKTAEILFSGWPGRSFFSYAVALIFVFLVAFTVEWLSHTKL-TASTTGNVAAGL 63
           HMTF+WGK +EILF+GWPG S   YA+AL  VF +A  +E+L   ++  +S+ G+     
Sbjct: 29  HMTFYWGKNSEILFTGWPGASGGMYALALAAVFALAVLLEFLGSPRVQESSSLGSRRRRA 88

Query: 64  VQTALYGVRVGLAFVIMLAVMSFNVGVLLAAVAGYSVGFLVYGSRVFDGSKIDSNLDPS 122
              A++ VRVGLA+++MLA+MSFNVGVLLAAVAG++ GFL + + +  G      L P+
Sbjct: 89  TAAAVHAVRVGLAYLLMLALMSFNVGVLLAAVAGHAAGFLAFRAGLCGGGYKKGELAPA 147

[Close]

BLAST of Lcy10g001270 vs. ExPASy TrEMBL
Match: A0A6J1KDT9 (Copper transporter OS=Cucurbita maxima OX=3661 GN=LOC111493433 PE=3 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 5.2e-50
Identity = 105/128 (82.03%), Postives = 115/128 (89.84%), Query Frame = 0


Query: 1   METHMTFFWGKTAEILFSGWPGRSFFSYAVALIFVFLVAFTVEWLSHTKLTASTTGNVAA 60
           ME HMTFFWGK+AEILF+GWPGRS  SYA+AL+F+FLVAF VEWLSHTKLTAS   +V A
Sbjct: 1   MEFHMTFFWGKSAEILFAGWPGRSSLSYAIALVFIFLVAFAVEWLSHTKLTASVADDVFA 60

Query: 61  GLVQTALYGVRVGLAFVIMLAVMSFNVGVLLAAVAGYSVGFLVYGSRVFDGSKIDSNLDP 120
           G VQTALYGVRVGLAFV+MLAVMSFNVGVLLAAVAGYSVGFLVYGSRVF+ SKID NL+ 
Sbjct: 61  GFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAGYSVGFLVYGSRVFNRSKIDLNLNM 120

Query: 121 SDLPPFNC 129
           SD+PP NC
Sbjct: 121 SDIPPLNC 128

[Close]

BLAST of Lcy10g001270 vs. ExPASy TrEMBL
Match: A0A6J1GAH5 (Copper transporter OS=Cucurbita moschata OX=3662 GN=LOC111452258 PE=3 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 8.9e-50
Identity = 105/128 (82.03%), Postives = 115/128 (89.84%), Query Frame = 0


Query: 1   METHMTFFWGKTAEILFSGWPGRSFFSYAVALIFVFLVAFTVEWLSHTKLTASTTGNVAA 60
           ME HMTFFWGK+AEILF+GWPGR+  SYA+AL+FVFLVAF VEWLSHTKLTAS   +V A
Sbjct: 1   MEFHMTFFWGKSAEILFAGWPGRNSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVFA 60

Query: 61  GLVQTALYGVRVGLAFVIMLAVMSFNVGVLLAAVAGYSVGFLVYGSRVFDGSKIDSNLDP 120
           G VQTALYGVRVGLAFV+MLAVMSFNVGVLLAAVAGYSVGFLVYGSRVF+ SKID NL+ 
Sbjct: 61  GFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAGYSVGFLVYGSRVFNRSKIDLNLNM 120

Query: 121 SDLPPFNC 129
           SD+PP NC
Sbjct: 121 SDIPPLNC 128

[Close]

BLAST of Lcy10g001270 vs. ExPASy TrEMBL
Match: A0A5A7SL08 (Copper transporter OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold848G00120 PE=3 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 2.6e-49
Identity = 104/130 (80.00%), Postives = 112/130 (86.15%), Query Frame = 0


Query: 1   METHMTFFWGKTAEILFSGWPGRSFFSYAVALIFVFLVAFTVEWLSHTKLTASTTGNVAA 60
           METHMTF+WGKT EILF GWPGRSFFSY VALIFVFL+AFTVEWLSHTK T    GN+ A
Sbjct: 3   METHMTFYWGKTVEILFVGWPGRSFFSYTVALIFVFLLAFTVEWLSHTKFTTLVVGNLTA 62

Query: 61  GLVQTALYGVRVGLAFVIMLAVMSFNVGVLLAAVAGYSVGFLVYGSRVFDGSKIDS--NL 120
           GLVQT LYGVRVGLAF++MLAVMS+NVGVLLAAV GYS+GFLVYGSRVF  SK+D   NL
Sbjct: 63  GLVQTILYGVRVGLAFIVMLAVMSYNVGVLLAAVTGYSMGFLVYGSRVFSRSKVDQNLNL 122

Query: 121 DPSDLPPFNC 129
           D SDLPP NC
Sbjct: 123 DLSDLPPLNC 132

[Close]

BLAST of Lcy10g001270 vs. ExPASy TrEMBL
Match: A0A6J1DUC3 (Copper transporter OS=Momordica charantia OX=3673 GN=LOC111024520 PE=3 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 4.4e-49
Identity = 106/132 (80.30%), Postives = 117/132 (88.64%), Query Frame = 0


Query: 1   METHMTFFWGKTAEILFSGWP--GRSFFSYAVALIFVFLVAFTVEWLSHTKLTASTTGNV 60
           METH+TF+WGKT EILFSGWP  GRS FSY VAL FVFL+AFTVEWLSH +LTAS   +V
Sbjct: 1   METHVTFYWGKTGEILFSGWPGAGRSLFSYTVALFFVFLLAFTVEWLSHARLTASAANDV 60

Query: 61  AAGLVQTALYGVRVGLAFVIMLAVMSFNVGVLLAAVAGYSVGFLVYGSRVFDGSKIDSNL 120
           AAG+VQTA+YGVRVGLAFV+MLAVMSFNVGVLLAAVAGYSVGFL+YGSRVF GSKI+ +L
Sbjct: 61  AAGMVQTAMYGVRVGLAFVVMLAVMSFNVGVLLAAVAGYSVGFLLYGSRVFSGSKINPSL 120

Query: 121 DP--SDLPPFNC 129
           DP  SDLPP NC
Sbjct: 121 DPSVSDLPPLNC 132

[Close]

BLAST of Lcy10g001270 vs. ExPASy TrEMBL
Match: A0A5D3BC00 (Copper transporter OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G001700 PE=3 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 7.6e-49
Identity = 103/130 (79.23%), Postives = 112/130 (86.15%), Query Frame = 0


Query: 1   METHMTFFWGKTAEILFSGWPGRSFFSYAVALIFVFLVAFTVEWLSHTKLTASTTGNVAA 60
           METHMTF+WGKT EILF GWPGRSFFSY VALIFVFL+AFTVEWLSHTK T    GN+ A
Sbjct: 3   METHMTFYWGKTVEILFVGWPGRSFFSYTVALIFVFLLAFTVEWLSHTKFTTLVVGNLTA 62

Query: 61  GLVQTALYGVRVGLAFVIMLAVMSFNVGVLLAAVAGYSVGFLVYGSRVFDGSKIDS--NL 120
           GLVQT LYGVRVGLAF++MLAVMS+NVGVLLAAV GYS+GFLVYGS+VF  SK+D   NL
Sbjct: 63  GLVQTILYGVRVGLAFIVMLAVMSYNVGVLLAAVTGYSMGFLVYGSQVFSRSKVDQNLNL 122

Query: 121 DPSDLPPFNC 129
           D SDLPP NC
Sbjct: 123 DLSDLPPLNC 132

[Close]

BLAST of Lcy10g001270 vs. NCBI nr
Match: XP_023525766.1 (copper transporter 1-like [Cucurbita pepo subsp. pepo] >KAG7036956.1 Copper transporter 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 207.2 bits (526), Expect = 8.3e-50
Identity = 106/128 (82.81%), Postives = 115/128 (89.84%), Query Frame = 0


Query: 1   METHMTFFWGKTAEILFSGWPGRSFFSYAVALIFVFLVAFTVEWLSHTKLTASTTGNVAA 60
           ME HMTFFWGK+AEILF+GWPGRS  SYA+AL+FVFLVAF VEWLSHTKLTAS   +V A
Sbjct: 1   MEFHMTFFWGKSAEILFAGWPGRSSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVFA 60

Query: 61  GLVQTALYGVRVGLAFVIMLAVMSFNVGVLLAAVAGYSVGFLVYGSRVFDGSKIDSNLDP 120
           G VQTALYGVRVGLAFV+MLAVMSFNVGVLLAAVAGYSVGFLVYGSRVF+ SKID NL+ 
Sbjct: 61  GFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAGYSVGFLVYGSRVFNRSKIDLNLNM 120

Query: 121 SDLPPFNC 129
           SD+PP NC
Sbjct: 121 SDIPPLNC 128

[Close]

BLAST of Lcy10g001270 vs. NCBI nr
Match: XP_022998910.1 (copper transporter 1-like [Cucurbita maxima])

HSP 1 Score: 206.8 bits (525), Expect = 1.1e-49
Identity = 105/128 (82.03%), Postives = 115/128 (89.84%), Query Frame = 0


Query: 1   METHMTFFWGKTAEILFSGWPGRSFFSYAVALIFVFLVAFTVEWLSHTKLTASTTGNVAA 60
           ME HMTFFWGK+AEILF+GWPGRS  SYA+AL+F+FLVAF VEWLSHTKLTAS   +V A
Sbjct: 1   MEFHMTFFWGKSAEILFAGWPGRSSLSYAIALVFIFLVAFAVEWLSHTKLTASVADDVFA 60

Query: 61  GLVQTALYGVRVGLAFVIMLAVMSFNVGVLLAAVAGYSVGFLVYGSRVFDGSKIDSNLDP 120
           G VQTALYGVRVGLAFV+MLAVMSFNVGVLLAAVAGYSVGFLVYGSRVF+ SKID NL+ 
Sbjct: 61  GFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAGYSVGFLVYGSRVFNRSKIDLNLNM 120

Query: 121 SDLPPFNC 129
           SD+PP NC
Sbjct: 121 SDIPPLNC 128

[Close]

BLAST of Lcy10g001270 vs. NCBI nr
Match: XP_022948639.1 (copper transporter 1-like [Cucurbita moschata])

HSP 1 Score: 206.1 bits (523), Expect = 1.8e-49
Identity = 105/128 (82.03%), Postives = 115/128 (89.84%), Query Frame = 0


Query: 1   METHMTFFWGKTAEILFSGWPGRSFFSYAVALIFVFLVAFTVEWLSHTKLTASTTGNVAA 60
           ME HMTFFWGK+AEILF+GWPGR+  SYA+AL+FVFLVAF VEWLSHTKLTAS   +V A
Sbjct: 1   MEFHMTFFWGKSAEILFAGWPGRNSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVFA 60

Query: 61  GLVQTALYGVRVGLAFVIMLAVMSFNVGVLLAAVAGYSVGFLVYGSRVFDGSKIDSNLDP 120
           G VQTALYGVRVGLAFV+MLAVMSFNVGVLLAAVAGYSVGFLVYGSRVF+ SKID NL+ 
Sbjct: 61  GFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAGYSVGFLVYGSRVFNRSKIDLNLNM 120

Query: 121 SDLPPFNC 129
           SD+PP NC
Sbjct: 121 SDIPPLNC 128

[Close]

BLAST of Lcy10g001270 vs. NCBI nr
Match: KAA0031772.1 (putative Copper transporter [Cucumis melo var. makuwa])

HSP 1 Score: 204.5 bits (519), Expect = 5.4e-49
Identity = 104/130 (80.00%), Postives = 112/130 (86.15%), Query Frame = 0


Query: 1   METHMTFFWGKTAEILFSGWPGRSFFSYAVALIFVFLVAFTVEWLSHTKLTASTTGNVAA 60
           METHMTF+WGKT EILF GWPGRSFFSY VALIFVFL+AFTVEWLSHTK T    GN+ A
Sbjct: 3   METHMTFYWGKTVEILFVGWPGRSFFSYTVALIFVFLLAFTVEWLSHTKFTTLVVGNLTA 62

Query: 61  GLVQTALYGVRVGLAFVIMLAVMSFNVGVLLAAVAGYSVGFLVYGSRVFDGSKIDS--NL 120
           GLVQT LYGVRVGLAF++MLAVMS+NVGVLLAAV GYS+GFLVYGSRVF  SK+D   NL
Sbjct: 63  GLVQTILYGVRVGLAFIVMLAVMSYNVGVLLAAVTGYSMGFLVYGSRVFSRSKVDQNLNL 122

Query: 121 DPSDLPPFNC 129
           D SDLPP NC
Sbjct: 123 DLSDLPPLNC 132

[Close]

BLAST of Lcy10g001270 vs. NCBI nr
Match: XP_022157910.1 (copper transporter 1-like [Momordica charantia])

HSP 1 Score: 203.8 bits (517), Expect = 9.2e-49
Identity = 106/132 (80.30%), Postives = 117/132 (88.64%), Query Frame = 0


Query: 1   METHMTFFWGKTAEILFSGWP--GRSFFSYAVALIFVFLVAFTVEWLSHTKLTASTTGNV 60
           METH+TF+WGKT EILFSGWP  GRS FSY VAL FVFL+AFTVEWLSH +LTAS   +V
Sbjct: 1   METHVTFYWGKTGEILFSGWPGAGRSLFSYTVALFFVFLLAFTVEWLSHARLTASAANDV 60

Query: 61  AAGLVQTALYGVRVGLAFVIMLAVMSFNVGVLLAAVAGYSVGFLVYGSRVFDGSKIDSNL 120
           AAG+VQTA+YGVRVGLAFV+MLAVMSFNVGVLLAAVAGYSVGFL+YGSRVF GSKI+ +L
Sbjct: 61  AAGMVQTAMYGVRVGLAFVVMLAVMSFNVGVLLAAVAGYSVGFLLYGSRVFSGSKINPSL 120

Query: 121 DP--SDLPPFNC 129
           DP  SDLPP NC
Sbjct: 121 DPSVSDLPPLNC 132

[Close]

BLAST of Lcy10g001270 vs. TAIR 10
Match: AT5G59030.1 (copper transporter 1 )

HSP 1 Score: 134.8 bits (338), Expect = 4.9e-32
Identity = 70/131 (53.44%), Postives = 93/131 (70.99%), Query Frame = 0


Query: 1   METHMTFFWGKTAEILFSGWPGRSFFSYAVALIFVFLVAFTVEWLSHTKLTASTTG---N 60
           M  HMTFFWGK  E+LFSGWPG S   YA+ LIFVF +A   EWL+H+ L   +TG   N
Sbjct: 40  MMMHMTFFWGKNTEVLFSGWPGTSSGMYALCLIFVFFLAVLTEWLAHSSLLRGSTGDSAN 99

Query: 61  VAAGLVQTALYGVRVGLAFVIMLAVMSFNVGVLLAAVAGYSVGFLVYGSRVFDGSKIDSN 120
            AAGL+QTA+Y +R+GLA+++MLAVMSFN GV L A+AG++VGF+++GS+ F  +  D  
Sbjct: 100 RAAGLIQTAVYTLRIGLAYLVMLAVMSFNAGVFLVALAGHAVGFMLFGSQTFRNTSDDRK 159

Query: 121 LDPSDLPPFNC 129
              + +PP  C
Sbjct: 160 --TNYVPPSGC 168

[Close]

BLAST of Lcy10g001270 vs. TAIR 10
Match: AT3G46900.1 (copper transporter 2 )

HSP 1 Score: 123.6 bits (309), Expect = 1.1e-28
Identity = 67/126 (53.17%), Postives = 85/126 (67.46%), Query Frame = 0


Query: 1   METHMTFFWGKTAEILFSGWPGRSFFSYAVALIFVFLVAFTVEWLSHTK-LTASTTGNVA 60
           M  HMTFFWGK  E+LFSGWPG S   YA+ LI +FL+A   EWL+H+  L  S + N A
Sbjct: 28  MMMHMTFFWGKNTEVLFSGWPGTSSGMYALCLIVIFLLAVIAEWLAHSPILRVSGSTNRA 87

Query: 61  AGLVQTALYGVRVGLAFVIMLAVMSFNVGVLLAAVAGYSVGFLVYGSRVF----DGSKID 120
           AGL QTA+Y ++ GL++++MLAVMSFN GV + A+AGY VGF ++GS  F    D  K  
Sbjct: 88  AGLAQTAVYTLKTGLSYLVMLAVMSFNAGVFIVAIAGYGVGFFLFGSTTFKKPSDDQKTA 147

Query: 121 SNLDPS 122
             L PS
Sbjct: 148 ELLPPS 153

[Close]

BLAST of Lcy10g001270 vs. TAIR 10
Match: AT2G26975.1 (Ctr copper transporter family )

HSP 1 Score: 118.6 bits (296), Expect = 3.6e-27
Identity = 62/113 (54.87%), Postives = 81/113 (71.68%), Query Frame = 0


Query: 4   HMTFFWGKTAEILFSGWPGRSFFSYAVALIFVFLVAFTVEWLSHTK-LTASTTGNVAAGL 63
           HMTFFWGK  EILFSGWPG S   Y + LI VFL+A  VEWL+H+  L    + + A GL
Sbjct: 26  HMTFFWGKNTEILFSGWPGTSLGMYVLCLIVVFLLAVIVEWLAHSSILRGRGSTSRAKGL 85

Query: 64  VQTALYGVRVGLAFVIMLAVMSFNVGVLLAAVAGYSVGFLVYGSRVFDGSKID 116
           VQTA+Y ++ GLA+++MLAVMSFN GV + A+AG++VGF+++GS  F     D
Sbjct: 86  VQTAVYTLKTGLAYLVMLAVMSFNGGVFIVAIAGFAVGFMLFGSTAFKNPSDD 138

[Close]

BLAST of Lcy10g001270 vs. TAIR 10
Match: AT5G59040.1 (copper transporter 3 )

HSP 1 Score: 109.4 bits (272), Expect = 2.2e-24
Identity = 55/116 (47.41%), Postives = 79/116 (68.10%), Query Frame = 0


Query: 4   HMTFFWGKTAEILFSGWPGRSFFSYAVALIFVFLVAFTVEWLSHTKLTASTTGNVAAGLV 63
           HMTFFWGKT E+LF GWPG S   Y V L  +F+++   E LS      S   ++  GL+
Sbjct: 31  HMTFFWGKTTEVLFDGWPGTSLKMYWVCLAVIFVISAFSECLSRCGFMKSGPASLGGGLL 90

Query: 64  QTALYGVRVGLAFVIMLAVMSFNVGVLLAAVAGYSVGFLVYGSRVFDGSKIDSNLD 120
           QTA+Y VR  L++++MLAVMSFN GV +AA+AG+ +GF+++GSR F  +  +S+ +
Sbjct: 91  QTAVYTVRAALSYLVMLAVMSFNGGVFVAAMAGFGLGFMIFGSRAFRATSSNSHTE 146

[Close]

BLAST of Lcy10g001270 vs. TAIR 10
Match: AT2G37925.1 (copper transporter 4 )

HSP 1 Score: 91.7 bits (226), Expect = 4.7e-19
Identity = 49/109 (44.95%), Postives = 71/109 (65.14%), Query Frame = 0


Query: 4   HMTFFWGKTAEILFSGWPGRSFFSYAVALIFVFLVAFTVEWLSHTKLTAST---TGNVAA 63
           H TF+WG   ++LFSGWPG     YA+ALIFVF +AF  EWL+     +S       +A 
Sbjct: 31  HPTFYWGYNCQVLFSGWPGSDRGMYALALIFVFFLAFLAEWLARCSDASSIKQGADKLAK 90

Query: 64  GLVQTALYGVRVGLAFVIMLAVMSFNVGVLLAAVAGYSVGFLVYGSRVF 110
              +TA+Y V+ G +++++LAV+SFN GV LAA+ G+++GF V+  R F
Sbjct: 91  VAFRTAMYTVKSGFSYLVILAVVSFNGGVFLAAIFGHALGFAVFRGRAF 139

The following BLAST results are available for this feature:

BLAST of Lcy10g001270 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39065	6.9e-31	53.44	Copper transporter 1 OS=Arabidopsis thaliana OX=3702 GN=COPT1 PE=2 SV=2	[more]
Q9STG2	1.6e-27	53.17	Copper transporter 2 OS=Arabidopsis thaliana OX=3702 GN=COPT2 PE=2 SV=1	[more]
Q8GWP3	5.1e-26	54.87	Copper transporter 6 OS=Arabidopsis thaliana OX=3702 GN=COPT6 PE=2 SV=1	[more]
Q9FGU8	3.1e-23	47.41	Copper transporter 3 OS=Arabidopsis thaliana OX=3702 GN=COPT3 PE=2 SV=1	[more]
Q5ZD08	1.9e-20	47.90	Copper transporter 3 OS=Oryza sativa subsp. japonica OX=39947 GN=COPT3 PE=2 SV=1	[more]

BLAST of Lcy10g001270 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KDT9	5.2e-50	82.03	Copper transporter OS=Cucurbita maxima OX=3661 GN=LOC111493433 PE=3 SV=1	[more]
A0A6J1GAH5	8.9e-50	82.03	Copper transporter OS=Cucurbita moschata OX=3662 GN=LOC111452258 PE=3 SV=1	[more]
A0A5A7SL08	2.6e-49	80.00	Copper transporter OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold848G0...	[more]
A0A6J1DUC3	4.4e-49	80.30	Copper transporter OS=Momordica charantia OX=3673 GN=LOC111024520 PE=3 SV=1	[more]
A0A5D3BC00	7.6e-49	79.23	Copper transporter OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G0...	[more]

BLAST of Lcy10g001270 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023525766.1	8.3e-50	82.81	copper transporter 1-like [Cucurbita pepo subsp. pepo] >KAG7036956.1 Copper tran...	[more]
XP_022998910.1	1.1e-49	82.03	copper transporter 1-like [Cucurbita maxima]	[more]
XP_022948639.1	1.8e-49	82.03	copper transporter 1-like [Cucurbita moschata]	[more]
KAA0031772.1	5.4e-49	80.00	putative Copper transporter [Cucumis melo var. makuwa]	[more]
XP_022157910.1	9.2e-49	80.30	copper transporter 1-like [Momordica charantia]	[more]

BLAST of Lcy10g001270 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59030.1	4.9e-32	53.44	copper transporter 1	[more]
AT3G46900.1	1.1e-28	53.17	copper transporter 2	[more]
AT2G26975.1	3.6e-27	54.87	Ctr copper transporter family	[more]
AT5G59040.1	2.2e-24	47.41	copper transporter 3	[more]
AT2G37925.1	4.7e-19	44.95	copper transporter 4	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007274	Ctr copper transporter	PFAM	PF04145	Ctr	coord: 57..103 e-value: 4.8E-9 score: 37.0 coord: 5..50 e-value: 5.4E-7 score: 30.3
IPR007274	Ctr copper transporter	PANTHER	PTHR12483	SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS	coord: 1..127
None	No IPR available	PANTHER	PTHR12483:SF86	SUBFAMILY NOT NAMED	coord: 1..127

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy10g001270.1	Lcy10g001270.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006878	cellular copper ion homeostasis
biological_process	GO:0035434	copper ion transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005375	copper ion transmembrane transporter activity