Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATCTCCAAACTAGCAACAATGGTAGTGAAATTTTGGTTTCAGATATCAAAATTGAGCTTCAAGAATCCATTAATGGTGGACCTCATGGTTATCACGAGCTCCAATCCATCTTCGAAGACATCGATAATGCCTGTTCCACTCATTATGTTAGTGCTCCTTGGAGCCCCGACCATGGCCCTGTCGATGGATATTGTTACAACACTCTGGCTAGTCCAATGCATTTCACCATAACTAAATCATCGATGTCGCTTGCTCAGTTGTCGTTGTCTTCCTTGAAAGAATCCATTCGTTTTCCTTCGAATTTGAGTTCTCTAGGATATTTGGGTGTAACGGCTCGGGTTCAATCGCATTTATAAGCTCAGCAAATGAGTTGTTCTTGAACAGAGAGATCCAATCGGTGAAATTCTCGACTCACTTGGAGCAGCTGCAGGGTTTTGTCGCCATTGTTGGATCTGGAAGGGAAGATGAAGAAGATGAAGGAGGTGAAATTGTAGGGTTTGTAAGAGGGAGAGAACTATGGTTTGCGATAAATCTCTCCAATGAAAAACCAGATCTATGTCGCTGTTGA
mRNA sequence
ATGGATCTCCAAACTAGCAACAATGGTAGTGAAATTTTGGTTTCAGATATCAAAATTGAGCTTCAAGAATCCATTAATGGTGGACCTCATGGTTATCACGAGCTCCAATCCATCTTCGAAGACATCGATAATGCCTGTTCCACTCATTATGTTAGTGCTCCTTGGAGCCCCGACCATGGCCCTGTCGATGGATATTGTTACAACACTCTGGCTAGTCCAATGCATTTCACCATAACTAAATCATCGATGTCGCTTGCTCAGTTGTCGTTGTCTTCCTTGAAAGAATCCATTCGTTTTCCTTCGAATTTGAGTTCTCTAGGATATTTGGGTGTAACGGCTCGGCTGCAGGGTTTTGTCGCCATTGTTGGATCTGGAAGGGAAGATGAAGAAGATGAAGGAGGTGAAATTGTAGGGTTTGTAAGAGGGAGAGAACTATGGTTTGCGATAAATCTCTCCAATGAAAAACCAGATCTATGTCGCTGTTGA
Coding sequence (CDS)
ATGGATCTCCAAACTAGCAACAATGGTAGTGAAATTTTGGTTTCAGATATCAAAATTGAGCTTCAAGAATCCATTAATGGTGGACCTCATGGTTATCACGAGCTCCAATCCATCTTCGAAGACATCGATAATGCCTGTTCCACTCATTATGTTAGTGCTCCTTGGAGCCCCGACCATGGCCCTGTCGATGGATATTGTTACAACACTCTGGCTAGTCCAATGCATTTCACCATAACTAAATCATCGATGTCGCTTGCTCAGTTGTCGTTGTCTTCCTTGAAAGAATCCATTCGTTTTCCTTCGAATTTGAGTTCTCTAGGATATTTGGGTGTAACGGCTCGGCTGCAGGGTTTTGTCGCCATTGTTGGATCTGGAAGGGAAGATGAAGAAGATGAAGGAGGTGAAATTGTAGGGTTTGTAAGAGGGAGAGAACTATGGTTTGCGATAAATCTCTCCAATGAAAAACCAGATCTATGTCGCTGTTGA
Protein sequence
MDLQTSNNGSEILVSDIKIELQESINGGPHGYHELQSIFEDIDNACSTHYVSAPWSPDHGPVDGYCYNTLASPMHFTITKSSMSLAQLSLSSLKESIRFPSNLSSLGYLGVTARLQGFVAIVGSGREDEEDEGGEIVGFVRGRELWFAINLSNEKPDLCRC
Homology
BLAST of Lcy09g021450 vs. ExPASy TrEMBL
Match:
A0A6J1DRU5 (uncharacterized protein LOC111023263 OS=Momordica charantia OX=3673 GN=LOC111023263 PE=4 SV=1)
HSP 1 Score: 150.6 bits (379), Expect = 5.6e-33
Identity = 91/174 (52.30%), Postives = 108/174 (62.07%), Query Frame = 0
Query: 1 MDLQTSNNGSEILVSDIKIELQESINGGPHGYHELQSIFEDIDNACSTHYVSAPWSPDHG 60
M+LQTSNNG E L SDIK ELQES+NG HG H+ QS+FED+D+ACST YVSAP SP G
Sbjct: 1 MELQTSNNGGESLDSDIKTELQESVNGATHGAHDPQSVFEDVDSACSTPYVSAPSSPGRG 60
Query: 61 PVDGYCYNTLASPMHFTITKSSMSLAQLSLSSLKESI----------RFPSN-------L 120
PV G+ Y+ ASPMHF ITK+S S AQL SSLK+S RF SN +
Sbjct: 61 PVGGFYYSAPASPMHFAITKASSSSAQLPSSSLKDSHSFSFEFEFSGRFGSNGSGSVGSM 120
Query: 121 SSLGYLGVTARL------------QGFVAIVGSGREDEEDEGGEIVGFVRGREL 146
SS L + ++ Q ++ EDEEDEGGEIVGFVRGR+L
Sbjct: 121 SSADELFLNGKIRPMKLSTHLEQPQVLAPLLDLEGEDEEDEGGEIVGFVRGRDL 174
BLAST of Lcy09g021450 vs. ExPASy TrEMBL
Match:
A0A6J1KEN6 (uncharacterized protein LOC111493647 OS=Cucurbita maxima OX=3661 GN=LOC111493647 PE=4 SV=1)
HSP 1 Score: 147.5 bits (371), Expect = 4.7e-32
Identity = 90/174 (51.72%), Postives = 107/174 (61.49%), Query Frame = 0
Query: 1 MDLQTSNNGSEILVSDIKIELQESINGGPHGYHELQSIFEDIDNACSTHYVSAPWSPDHG 60
M+LQTSNN EIL SD+K ELQE NGGPHG HE S+FED+D+ACST YVSAP SP
Sbjct: 5 MELQTSNNDGEILDSDVKTELQEPNNGGPHGVHEPLSVFEDVDSACSTPYVSAPSSPGRS 64
Query: 61 PVDGYCYNTLASPMHFTITKSSMSLAQLSLSSLKE----------SIRFPSN-------L 120
PV G+ Y+ ASPMHF ITKSS S AQLS SSLK+ S RF SN +
Sbjct: 65 PVGGFYYSAPASPMHFAITKSSNSSAQLSSSSLKDGHSCSFEFEFSGRFGSNGSGSVGSM 124
Query: 121 SSLGYLGVTARL------------QGFVAIVGSGREDEEDEGGEIVGFVRGREL 146
SS L + ++ Q ++ EDE+DEGGEIVG+VRGR+L
Sbjct: 125 SSADELFLNGKIRPMKLSTHLEQPQVLAPLLDLEGEDEDDEGGEIVGYVRGRDL 178
BLAST of Lcy09g021450 vs. ExPASy TrEMBL
Match:
A0A6J1G3P1 (uncharacterized protein LOC111450471 OS=Cucurbita moschata OX=3662 GN=LOC111450471 PE=4 SV=1)
HSP 1 Score: 146.4 bits (368), Expect = 1.1e-31
Identity = 90/174 (51.72%), Postives = 107/174 (61.49%), Query Frame = 0
Query: 1 MDLQTSNNGSEILVSDIKIELQESINGGPHGYHELQSIFEDIDNACSTHYVSAPWSPDHG 60
M+LQTSNNG EIL D+K ELQE NGG HG HE Q+IFED+D+ACST YVSAP SP
Sbjct: 5 MELQTSNNGGEILDLDVKTELQEPNNGGHHGVHEPQAIFEDVDSACSTPYVSAPSSPGRS 64
Query: 61 PVDGYCYNTLASPMHFTITKSSMSLAQLSLSSLKE----------SIRFPSN-------L 120
PV G+ Y+ ASPMHF ITKSS S AQLS SSLK+ S RF SN +
Sbjct: 65 PVGGFYYSAPASPMHFAITKSSNSSAQLSSSSLKDGHSCSFEFEFSGRFGSNGSGSVGSM 124
Query: 121 SSLGYLGVTARL------------QGFVAIVGSGREDEEDEGGEIVGFVRGREL 146
SS L + ++ Q ++ EDE+DEGGEIVG+VRGR+L
Sbjct: 125 SSADELFLNGKIRPMKLSTHLEQPQVLAPLLDLEGEDEDDEGGEIVGYVRGRDL 178
BLAST of Lcy09g021450 vs. ExPASy TrEMBL
Match:
A0A6J1HL82 (uncharacterized protein LOC111465566 OS=Cucurbita maxima OX=3661 GN=LOC111465566 PE=4 SV=1)
HSP 1 Score: 141.7 bits (356), Expect = 2.6e-30
Identity = 84/174 (48.28%), Postives = 104/174 (59.77%), Query Frame = 0
Query: 1 MDLQTSNNGSEILVSDIKIELQESINGGPHGYHELQSIFEDIDNACSTHYVSAPWSPDHG 60
M+LQTSNNG E L S+ K EL+E IN GPHG HE Q +FED+D+ACST YVSAP SP G
Sbjct: 5 MELQTSNNGGENLDSESKTELKEGINSGPHGAHEPQYVFEDVDSACSTPYVSAPSSPGRG 64
Query: 61 PVDGYCYNTLASPMHFTITKSSMSLAQLSLSSLKESIRFP-----------------SNL 120
+ G+ Y+ ASPMHF+ITKSS S AQL SSLK+S F ++
Sbjct: 65 HIGGFYYSAPASPMHFSITKSSSSSAQLPSSSLKDSHSFSFEFEFSGRFGSIGSGSIGSM 124
Query: 121 SSLGYLGVTARL------------QGFVAIVGSGREDEEDEGGEIVGFVRGREL 146
SS L + ++ Q ++ EDEEDEGGE+VGFVRGR+L
Sbjct: 125 SSADELFLNGKIRPMKLSTHLEQPQVLAPLLDLEGEDEEDEGGEVVGFVRGRDL 178
BLAST of Lcy09g021450 vs. ExPASy TrEMBL
Match:
A0A0A0LIY6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G033880 PE=4 SV=1)
HSP 1 Score: 136.7 bits (343), Expect = 8.4e-29
Identity = 84/172 (48.84%), Postives = 102/172 (59.30%), Query Frame = 0
Query: 1 MDLQTSNNGSEILVSDIKIELQESINGGPHGYHELQSIFEDIDNACSTHYVSAPWSPDHG 60
M+LQTSNNG E L S IK ELQE+ NGG +G HE QS+FED+D+ACST YVSAP SP G
Sbjct: 1 MELQTSNNGGENLDSGIKTELQETFNGGTYGAHEPQSVFEDVDSACSTPYVSAPSSPGRG 60
Query: 61 PVDGYCYNTLASPMHFTITKSSMSLAQLSLSSLKESI--------RFPSN-------LSS 120
PV G+ Y+ ASPMHF ITKSS S +Q S S RF SN +SS
Sbjct: 61 PVGGFYYSAPASPMHFAITKSSNSSSQFPSSKDSHSFSFEFEFSGRFGSNGSGSVGSMSS 120
Query: 121 LGYLGVTARL------------QGFVAIVGSGREDEEDEGGEIVGFVRGREL 146
L + ++ Q ++ EDE+DEGGEIVG+VRGR+L
Sbjct: 121 ADELFLNGKIRPMKLSTHLEQPQVLAPLLDLEGEDEDDEGGEIVGYVRGRDL 172
BLAST of Lcy09g021450 vs. NCBI nr
Match:
XP_023537879.1 (uncharacterized protein LOC111798784 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 151.4 bits (381), Expect = 6.8e-33
Identity = 90/174 (51.72%), Postives = 105/174 (60.34%), Query Frame = 0
Query: 1 MDLQTSNNGSEILVSDIKIELQESINGGPHGYHELQSIFEDIDNACSTHYVSAPWSPDHG 60
M+LQ SNNG E L SDIK ELQE INGGPHG HE Q +FED+D+ACST YVSAP SP G
Sbjct: 5 MELQASNNGGENLDSDIKTELQEGINGGPHGAHEPQYVFEDVDSACSTPYVSAPSSPGRG 64
Query: 61 PVDGYCYNTLASPMHFTITKSSMSLAQLSLSSLKESIRFP-----------------SNL 120
PV G+ Y+ ASPMHF ITKSS S AQL SSLK+S F ++
Sbjct: 65 PVGGFYYSAPASPMHFAITKSSSSSAQLPSSSLKDSHSFSFEFEFSGRFGSIGSGSIGSM 124
Query: 121 SSLGYLGVTARL------------QGFVAIVGSGREDEEDEGGEIVGFVRGREL 146
SS L + ++ Q ++ EDEEDEGGEIVGFVRGR+L
Sbjct: 125 SSADELFLNGKIRPMKLSTHLEQPQVLAPLLDLEGEDEEDEGGEIVGFVRGRDL 178
BLAST of Lcy09g021450 vs. NCBI nr
Match:
XP_022156347.1 (uncharacterized protein LOC111023263 [Momordica charantia])
HSP 1 Score: 150.6 bits (379), Expect = 1.2e-32
Identity = 91/174 (52.30%), Postives = 108/174 (62.07%), Query Frame = 0
Query: 1 MDLQTSNNGSEILVSDIKIELQESINGGPHGYHELQSIFEDIDNACSTHYVSAPWSPDHG 60
M+LQTSNNG E L SDIK ELQES+NG HG H+ QS+FED+D+ACST YVSAP SP G
Sbjct: 1 MELQTSNNGGESLDSDIKTELQESVNGATHGAHDPQSVFEDVDSACSTPYVSAPSSPGRG 60
Query: 61 PVDGYCYNTLASPMHFTITKSSMSLAQLSLSSLKESI----------RFPSN-------L 120
PV G+ Y+ ASPMHF ITK+S S AQL SSLK+S RF SN +
Sbjct: 61 PVGGFYYSAPASPMHFAITKASSSSAQLPSSSLKDSHSFSFEFEFSGRFGSNGSGSVGSM 120
Query: 121 SSLGYLGVTARL------------QGFVAIVGSGREDEEDEGGEIVGFVRGREL 146
SS L + ++ Q ++ EDEEDEGGEIVGFVRGR+L
Sbjct: 121 SSADELFLNGKIRPMKLSTHLEQPQVLAPLLDLEGEDEEDEGGEIVGFVRGRDL 174
BLAST of Lcy09g021450 vs. NCBI nr
Match:
KAG7030126.1 (hypothetical protein SDJN02_08473, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 148.7 bits (374), Expect = 4.4e-32
Identity = 91/174 (52.30%), Postives = 108/174 (62.07%), Query Frame = 0
Query: 1 MDLQTSNNGSEILVSDIKIELQESINGGPHGYHELQSIFEDIDNACSTHYVSAPWSPDHG 60
M+LQTSNNG EIL SD+K ELQE NGG HG HE Q+IFED+D+ACST YVSAP SP
Sbjct: 1 MELQTSNNGGEILDSDVKTELQEPNNGGHHGVHEPQAIFEDVDSACSTPYVSAPSSPGRS 60
Query: 61 PVDGYCYNTLASPMHFTITKSSMSLAQLSLSSLKE----------SIRFPSN-------L 120
PV G+ Y+ ASPMHF ITKSS S AQLS SSLK+ S RF SN +
Sbjct: 61 PVGGFYYSAPASPMHFAITKSSNSSAQLSSSSLKDGHSCSFEFEFSGRFGSNGSGSVGSM 120
Query: 121 SSLGYLGVTARL------------QGFVAIVGSGREDEEDEGGEIVGFVRGREL 146
SS L + ++ Q ++ EDE+DEGGEIVG+VRGR+L
Sbjct: 121 SSADELFLNGKIRPMKLSTHLEQPQVLAPLLDLEGEDEDDEGGEIVGYVRGRDL 174
BLAST of Lcy09g021450 vs. NCBI nr
Match:
KAG6599192.1 (hypothetical protein SDJN03_08970, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 148.7 bits (374), Expect = 4.4e-32
Identity = 91/174 (52.30%), Postives = 108/174 (62.07%), Query Frame = 0
Query: 1 MDLQTSNNGSEILVSDIKIELQESINGGPHGYHELQSIFEDIDNACSTHYVSAPWSPDHG 60
M+LQTSNNG EIL SD+K ELQE NGG HG HE Q+IFED+D+ACST YVSAP SP
Sbjct: 5 MELQTSNNGGEILDSDVKTELQEPNNGGHHGVHEPQAIFEDVDSACSTPYVSAPSSPGRS 64
Query: 61 PVDGYCYNTLASPMHFTITKSSMSLAQLSLSSLKE----------SIRFPSN-------L 120
PV G+ Y+ ASPMHF ITKSS S AQLS SSLK+ S RF SN +
Sbjct: 65 PVGGFYYSAPASPMHFAITKSSNSSAQLSSSSLKDGHSCSFEFEFSGRFGSNGSGSVGSM 124
Query: 121 SSLGYLGVTARL------------QGFVAIVGSGREDEEDEGGEIVGFVRGREL 146
SS L + ++ Q ++ EDE+DEGGEIVG+VRGR+L
Sbjct: 125 SSADELFLNGKIRPMKLSTHLEQPQVLAPLLDLEGEDEDDEGGEIVGYVRGRDL 178
BLAST of Lcy09g021450 vs. NCBI nr
Match:
XP_023545281.1 (uncharacterized protein LOC111804739 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 148.7 bits (374), Expect = 4.4e-32
Identity = 91/174 (52.30%), Postives = 108/174 (62.07%), Query Frame = 0
Query: 1 MDLQTSNNGSEILVSDIKIELQESINGGPHGYHELQSIFEDIDNACSTHYVSAPWSPDHG 60
M+LQTSNNG EIL SD+K ELQE NGG HG HE Q+IFED+D+ACST YVSAP SP
Sbjct: 5 MELQTSNNGGEILDSDVKTELQEPNNGGHHGVHEPQAIFEDVDSACSTPYVSAPSSPGRS 64
Query: 61 PVDGYCYNTLASPMHFTITKSSMSLAQLSLSSLKE----------SIRFPSN-------L 120
PV G+ Y+ ASPMHF ITKSS S AQLS SSLK+ S RF SN +
Sbjct: 65 PVGGFYYSAPASPMHFAITKSSNSSAQLSSSSLKDGHSCSFEFEFSGRFGSNGSGSVGSM 124
Query: 121 SSLGYLGVTARL------------QGFVAIVGSGREDEEDEGGEIVGFVRGREL 146
SS L + ++ Q ++ EDE+DEGGEIVG+VRGR+L
Sbjct: 125 SSADELFLNGKIRPMKLSTHLEQPQVLAPLLDLEGEDEDDEGGEIVGYVRGRDL 178
BLAST of Lcy09g021450 vs. TAIR 10
Match:
AT3G62630.1 (Protein of unknown function (DUF1645) )
HSP 1 Score: 45.1 bits (105), Expect = 6.4e-05
Identity = 35/93 (37.63%), Postives = 50/93 (53.76%), Query Frame = 0
Query: 19 IELQESINGGPHGYHELQSIFEDI--DNACSTHYVSAPWSPDHGPVDGYCYNTLASPMHF 78
++L ES + HG + +D +ACST +VSAP SP GP GY ++ +SPMHF
Sbjct: 1 MDLVESFS---HGDPDTPRFSDDFGSGSACSTPFVSAPSSPGRGPPPGYFFSAPSSPMHF 60
Query: 79 ---TITKSSMSLAQLSLSSLKE-SIRFPSNLSS 106
+ + SS + +L SS + F S LSS
Sbjct: 61 FLCSASSSSENPKKLDTSSCGDFEFDFSSRLSS 90
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1DRU5 | 5.6e-33 | 52.30 | uncharacterized protein LOC111023263 OS=Momordica charantia OX=3673 GN=LOC111023... | [more] |
A0A6J1KEN6 | 4.7e-32 | 51.72 | uncharacterized protein LOC111493647 OS=Cucurbita maxima OX=3661 GN=LOC111493647... | [more] |
A0A6J1G3P1 | 1.1e-31 | 51.72 | uncharacterized protein LOC111450471 OS=Cucurbita moschata OX=3662 GN=LOC1114504... | [more] |
A0A6J1HL82 | 2.6e-30 | 48.28 | uncharacterized protein LOC111465566 OS=Cucurbita maxima OX=3661 GN=LOC111465566... | [more] |
A0A0A0LIY6 | 8.4e-29 | 48.84 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G033880 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
XP_023537879.1 | 6.8e-33 | 51.72 | uncharacterized protein LOC111798784 [Cucurbita pepo subsp. pepo] | [more] |
XP_022156347.1 | 1.2e-32 | 52.30 | uncharacterized protein LOC111023263 [Momordica charantia] | [more] |
KAG7030126.1 | 4.4e-32 | 52.30 | hypothetical protein SDJN02_08473, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
KAG6599192.1 | 4.4e-32 | 52.30 | hypothetical protein SDJN03_08970, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_023545281.1 | 4.4e-32 | 52.30 | uncharacterized protein LOC111804739 [Cucurbita pepo subsp. pepo] | [more] |
Match Name | E-value | Identity | Description | |
AT3G62630.1 | 6.4e-05 | 37.63 | Protein of unknown function (DUF1645) | [more] |