Lcy09g021450 (gene) Sponge gourd (P93075) v1

Overview
NameLcy09g021450
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionProtein of unknown function (DUF1645)
LocationChr09: 47007183 .. 47007754 (+)
RNA-Seq ExpressionLcy09g021450
SyntenyLcy09g021450
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATCTCCAAACTAGCAACAATGGTAGTGAAATTTTGGTTTCAGATATCAAAATTGAGCTTCAAGAATCCATTAATGGTGGACCTCATGGTTATCACGAGCTCCAATCCATCTTCGAAGACATCGATAATGCCTGTTCCACTCATTATGTTAGTGCTCCTTGGAGCCCCGACCATGGCCCTGTCGATGGATATTGTTACAACACTCTGGCTAGTCCAATGCATTTCACCATAACTAAATCATCGATGTCGCTTGCTCAGTTGTCGTTGTCTTCCTTGAAAGAATCCATTCGTTTTCCTTCGAATTTGAGTTCTCTAGGATATTTGGGTGTAACGGCTCGGGTTCAATCGCATTTATAAGCTCAGCAAATGAGTTGTTCTTGAACAGAGAGATCCAATCGGTGAAATTCTCGACTCACTTGGAGCAGCTGCAGGGTTTTGTCGCCATTGTTGGATCTGGAAGGGAAGATGAAGAAGATGAAGGAGGTGAAATTGTAGGGTTTGTAAGAGGGAGAGAACTATGGTTTGCGATAAATCTCTCCAATGAAAAACCAGATCTATGTCGCTGTTGA

mRNA sequence

ATGGATCTCCAAACTAGCAACAATGGTAGTGAAATTTTGGTTTCAGATATCAAAATTGAGCTTCAAGAATCCATTAATGGTGGACCTCATGGTTATCACGAGCTCCAATCCATCTTCGAAGACATCGATAATGCCTGTTCCACTCATTATGTTAGTGCTCCTTGGAGCCCCGACCATGGCCCTGTCGATGGATATTGTTACAACACTCTGGCTAGTCCAATGCATTTCACCATAACTAAATCATCGATGTCGCTTGCTCAGTTGTCGTTGTCTTCCTTGAAAGAATCCATTCGTTTTCCTTCGAATTTGAGTTCTCTAGGATATTTGGGTGTAACGGCTCGGCTGCAGGGTTTTGTCGCCATTGTTGGATCTGGAAGGGAAGATGAAGAAGATGAAGGAGGTGAAATTGTAGGGTTTGTAAGAGGGAGAGAACTATGGTTTGCGATAAATCTCTCCAATGAAAAACCAGATCTATGTCGCTGTTGA

Coding sequence (CDS)

ATGGATCTCCAAACTAGCAACAATGGTAGTGAAATTTTGGTTTCAGATATCAAAATTGAGCTTCAAGAATCCATTAATGGTGGACCTCATGGTTATCACGAGCTCCAATCCATCTTCGAAGACATCGATAATGCCTGTTCCACTCATTATGTTAGTGCTCCTTGGAGCCCCGACCATGGCCCTGTCGATGGATATTGTTACAACACTCTGGCTAGTCCAATGCATTTCACCATAACTAAATCATCGATGTCGCTTGCTCAGTTGTCGTTGTCTTCCTTGAAAGAATCCATTCGTTTTCCTTCGAATTTGAGTTCTCTAGGATATTTGGGTGTAACGGCTCGGCTGCAGGGTTTTGTCGCCATTGTTGGATCTGGAAGGGAAGATGAAGAAGATGAAGGAGGTGAAATTGTAGGGTTTGTAAGAGGGAGAGAACTATGGTTTGCGATAAATCTCTCCAATGAAAAACCAGATCTATGTCGCTGTTGA

Protein sequence

MDLQTSNNGSEILVSDIKIELQESINGGPHGYHELQSIFEDIDNACSTHYVSAPWSPDHGPVDGYCYNTLASPMHFTITKSSMSLAQLSLSSLKESIRFPSNLSSLGYLGVTARLQGFVAIVGSGREDEEDEGGEIVGFVRGRELWFAINLSNEKPDLCRC
Homology
BLAST of Lcy09g021450 vs. ExPASy TrEMBL
Match: A0A6J1DRU5 (uncharacterized protein LOC111023263 OS=Momordica charantia OX=3673 GN=LOC111023263 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 5.6e-33
Identity = 91/174 (52.30%), Postives = 108/174 (62.07%), Query Frame = 0

Query: 1   MDLQTSNNGSEILVSDIKIELQESINGGPHGYHELQSIFEDIDNACSTHYVSAPWSPDHG 60
           M+LQTSNNG E L SDIK ELQES+NG  HG H+ QS+FED+D+ACST YVSAP SP  G
Sbjct: 1   MELQTSNNGGESLDSDIKTELQESVNGATHGAHDPQSVFEDVDSACSTPYVSAPSSPGRG 60

Query: 61  PVDGYCYNTLASPMHFTITKSSMSLAQLSLSSLKESI----------RFPSN-------L 120
           PV G+ Y+  ASPMHF ITK+S S AQL  SSLK+S           RF SN       +
Sbjct: 61  PVGGFYYSAPASPMHFAITKASSSSAQLPSSSLKDSHSFSFEFEFSGRFGSNGSGSVGSM 120

Query: 121 SSLGYLGVTARL------------QGFVAIVGSGREDEEDEGGEIVGFVRGREL 146
           SS   L +  ++            Q    ++    EDEEDEGGEIVGFVRGR+L
Sbjct: 121 SSADELFLNGKIRPMKLSTHLEQPQVLAPLLDLEGEDEEDEGGEIVGFVRGRDL 174

BLAST of Lcy09g021450 vs. ExPASy TrEMBL
Match: A0A6J1KEN6 (uncharacterized protein LOC111493647 OS=Cucurbita maxima OX=3661 GN=LOC111493647 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 4.7e-32
Identity = 90/174 (51.72%), Postives = 107/174 (61.49%), Query Frame = 0

Query: 1   MDLQTSNNGSEILVSDIKIELQESINGGPHGYHELQSIFEDIDNACSTHYVSAPWSPDHG 60
           M+LQTSNN  EIL SD+K ELQE  NGGPHG HE  S+FED+D+ACST YVSAP SP   
Sbjct: 5   MELQTSNNDGEILDSDVKTELQEPNNGGPHGVHEPLSVFEDVDSACSTPYVSAPSSPGRS 64

Query: 61  PVDGYCYNTLASPMHFTITKSSMSLAQLSLSSLKE----------SIRFPSN-------L 120
           PV G+ Y+  ASPMHF ITKSS S AQLS SSLK+          S RF SN       +
Sbjct: 65  PVGGFYYSAPASPMHFAITKSSNSSAQLSSSSLKDGHSCSFEFEFSGRFGSNGSGSVGSM 124

Query: 121 SSLGYLGVTARL------------QGFVAIVGSGREDEEDEGGEIVGFVRGREL 146
           SS   L +  ++            Q    ++    EDE+DEGGEIVG+VRGR+L
Sbjct: 125 SSADELFLNGKIRPMKLSTHLEQPQVLAPLLDLEGEDEDDEGGEIVGYVRGRDL 178

BLAST of Lcy09g021450 vs. ExPASy TrEMBL
Match: A0A6J1G3P1 (uncharacterized protein LOC111450471 OS=Cucurbita moschata OX=3662 GN=LOC111450471 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 1.1e-31
Identity = 90/174 (51.72%), Postives = 107/174 (61.49%), Query Frame = 0

Query: 1   MDLQTSNNGSEILVSDIKIELQESINGGPHGYHELQSIFEDIDNACSTHYVSAPWSPDHG 60
           M+LQTSNNG EIL  D+K ELQE  NGG HG HE Q+IFED+D+ACST YVSAP SP   
Sbjct: 5   MELQTSNNGGEILDLDVKTELQEPNNGGHHGVHEPQAIFEDVDSACSTPYVSAPSSPGRS 64

Query: 61  PVDGYCYNTLASPMHFTITKSSMSLAQLSLSSLKE----------SIRFPSN-------L 120
           PV G+ Y+  ASPMHF ITKSS S AQLS SSLK+          S RF SN       +
Sbjct: 65  PVGGFYYSAPASPMHFAITKSSNSSAQLSSSSLKDGHSCSFEFEFSGRFGSNGSGSVGSM 124

Query: 121 SSLGYLGVTARL------------QGFVAIVGSGREDEEDEGGEIVGFVRGREL 146
           SS   L +  ++            Q    ++    EDE+DEGGEIVG+VRGR+L
Sbjct: 125 SSADELFLNGKIRPMKLSTHLEQPQVLAPLLDLEGEDEDDEGGEIVGYVRGRDL 178

BLAST of Lcy09g021450 vs. ExPASy TrEMBL
Match: A0A6J1HL82 (uncharacterized protein LOC111465566 OS=Cucurbita maxima OX=3661 GN=LOC111465566 PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 2.6e-30
Identity = 84/174 (48.28%), Postives = 104/174 (59.77%), Query Frame = 0

Query: 1   MDLQTSNNGSEILVSDIKIELQESINGGPHGYHELQSIFEDIDNACSTHYVSAPWSPDHG 60
           M+LQTSNNG E L S+ K EL+E IN GPHG HE Q +FED+D+ACST YVSAP SP  G
Sbjct: 5   MELQTSNNGGENLDSESKTELKEGINSGPHGAHEPQYVFEDVDSACSTPYVSAPSSPGRG 64

Query: 61  PVDGYCYNTLASPMHFTITKSSMSLAQLSLSSLKESIRFP-----------------SNL 120
            + G+ Y+  ASPMHF+ITKSS S AQL  SSLK+S  F                   ++
Sbjct: 65  HIGGFYYSAPASPMHFSITKSSSSSAQLPSSSLKDSHSFSFEFEFSGRFGSIGSGSIGSM 124

Query: 121 SSLGYLGVTARL------------QGFVAIVGSGREDEEDEGGEIVGFVRGREL 146
           SS   L +  ++            Q    ++    EDEEDEGGE+VGFVRGR+L
Sbjct: 125 SSADELFLNGKIRPMKLSTHLEQPQVLAPLLDLEGEDEEDEGGEVVGFVRGRDL 178

BLAST of Lcy09g021450 vs. ExPASy TrEMBL
Match: A0A0A0LIY6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G033880 PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 8.4e-29
Identity = 84/172 (48.84%), Postives = 102/172 (59.30%), Query Frame = 0

Query: 1   MDLQTSNNGSEILVSDIKIELQESINGGPHGYHELQSIFEDIDNACSTHYVSAPWSPDHG 60
           M+LQTSNNG E L S IK ELQE+ NGG +G HE QS+FED+D+ACST YVSAP SP  G
Sbjct: 1   MELQTSNNGGENLDSGIKTELQETFNGGTYGAHEPQSVFEDVDSACSTPYVSAPSSPGRG 60

Query: 61  PVDGYCYNTLASPMHFTITKSSMSLAQLSLSSLKESI--------RFPSN-------LSS 120
           PV G+ Y+  ASPMHF ITKSS S +Q   S    S         RF SN       +SS
Sbjct: 61  PVGGFYYSAPASPMHFAITKSSNSSSQFPSSKDSHSFSFEFEFSGRFGSNGSGSVGSMSS 120

Query: 121 LGYLGVTARL------------QGFVAIVGSGREDEEDEGGEIVGFVRGREL 146
              L +  ++            Q    ++    EDE+DEGGEIVG+VRGR+L
Sbjct: 121 ADELFLNGKIRPMKLSTHLEQPQVLAPLLDLEGEDEDDEGGEIVGYVRGRDL 172

BLAST of Lcy09g021450 vs. NCBI nr
Match: XP_023537879.1 (uncharacterized protein LOC111798784 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 151.4 bits (381), Expect = 6.8e-33
Identity = 90/174 (51.72%), Postives = 105/174 (60.34%), Query Frame = 0

Query: 1   MDLQTSNNGSEILVSDIKIELQESINGGPHGYHELQSIFEDIDNACSTHYVSAPWSPDHG 60
           M+LQ SNNG E L SDIK ELQE INGGPHG HE Q +FED+D+ACST YVSAP SP  G
Sbjct: 5   MELQASNNGGENLDSDIKTELQEGINGGPHGAHEPQYVFEDVDSACSTPYVSAPSSPGRG 64

Query: 61  PVDGYCYNTLASPMHFTITKSSMSLAQLSLSSLKESIRFP-----------------SNL 120
           PV G+ Y+  ASPMHF ITKSS S AQL  SSLK+S  F                   ++
Sbjct: 65  PVGGFYYSAPASPMHFAITKSSSSSAQLPSSSLKDSHSFSFEFEFSGRFGSIGSGSIGSM 124

Query: 121 SSLGYLGVTARL------------QGFVAIVGSGREDEEDEGGEIVGFVRGREL 146
           SS   L +  ++            Q    ++    EDEEDEGGEIVGFVRGR+L
Sbjct: 125 SSADELFLNGKIRPMKLSTHLEQPQVLAPLLDLEGEDEEDEGGEIVGFVRGRDL 178

BLAST of Lcy09g021450 vs. NCBI nr
Match: XP_022156347.1 (uncharacterized protein LOC111023263 [Momordica charantia])

HSP 1 Score: 150.6 bits (379), Expect = 1.2e-32
Identity = 91/174 (52.30%), Postives = 108/174 (62.07%), Query Frame = 0

Query: 1   MDLQTSNNGSEILVSDIKIELQESINGGPHGYHELQSIFEDIDNACSTHYVSAPWSPDHG 60
           M+LQTSNNG E L SDIK ELQES+NG  HG H+ QS+FED+D+ACST YVSAP SP  G
Sbjct: 1   MELQTSNNGGESLDSDIKTELQESVNGATHGAHDPQSVFEDVDSACSTPYVSAPSSPGRG 60

Query: 61  PVDGYCYNTLASPMHFTITKSSMSLAQLSLSSLKESI----------RFPSN-------L 120
           PV G+ Y+  ASPMHF ITK+S S AQL  SSLK+S           RF SN       +
Sbjct: 61  PVGGFYYSAPASPMHFAITKASSSSAQLPSSSLKDSHSFSFEFEFSGRFGSNGSGSVGSM 120

Query: 121 SSLGYLGVTARL------------QGFVAIVGSGREDEEDEGGEIVGFVRGREL 146
           SS   L +  ++            Q    ++    EDEEDEGGEIVGFVRGR+L
Sbjct: 121 SSADELFLNGKIRPMKLSTHLEQPQVLAPLLDLEGEDEEDEGGEIVGFVRGRDL 174

BLAST of Lcy09g021450 vs. NCBI nr
Match: KAG7030126.1 (hypothetical protein SDJN02_08473, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 148.7 bits (374), Expect = 4.4e-32
Identity = 91/174 (52.30%), Postives = 108/174 (62.07%), Query Frame = 0

Query: 1   MDLQTSNNGSEILVSDIKIELQESINGGPHGYHELQSIFEDIDNACSTHYVSAPWSPDHG 60
           M+LQTSNNG EIL SD+K ELQE  NGG HG HE Q+IFED+D+ACST YVSAP SP   
Sbjct: 1   MELQTSNNGGEILDSDVKTELQEPNNGGHHGVHEPQAIFEDVDSACSTPYVSAPSSPGRS 60

Query: 61  PVDGYCYNTLASPMHFTITKSSMSLAQLSLSSLKE----------SIRFPSN-------L 120
           PV G+ Y+  ASPMHF ITKSS S AQLS SSLK+          S RF SN       +
Sbjct: 61  PVGGFYYSAPASPMHFAITKSSNSSAQLSSSSLKDGHSCSFEFEFSGRFGSNGSGSVGSM 120

Query: 121 SSLGYLGVTARL------------QGFVAIVGSGREDEEDEGGEIVGFVRGREL 146
           SS   L +  ++            Q    ++    EDE+DEGGEIVG+VRGR+L
Sbjct: 121 SSADELFLNGKIRPMKLSTHLEQPQVLAPLLDLEGEDEDDEGGEIVGYVRGRDL 174

BLAST of Lcy09g021450 vs. NCBI nr
Match: KAG6599192.1 (hypothetical protein SDJN03_08970, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 148.7 bits (374), Expect = 4.4e-32
Identity = 91/174 (52.30%), Postives = 108/174 (62.07%), Query Frame = 0

Query: 1   MDLQTSNNGSEILVSDIKIELQESINGGPHGYHELQSIFEDIDNACSTHYVSAPWSPDHG 60
           M+LQTSNNG EIL SD+K ELQE  NGG HG HE Q+IFED+D+ACST YVSAP SP   
Sbjct: 5   MELQTSNNGGEILDSDVKTELQEPNNGGHHGVHEPQAIFEDVDSACSTPYVSAPSSPGRS 64

Query: 61  PVDGYCYNTLASPMHFTITKSSMSLAQLSLSSLKE----------SIRFPSN-------L 120
           PV G+ Y+  ASPMHF ITKSS S AQLS SSLK+          S RF SN       +
Sbjct: 65  PVGGFYYSAPASPMHFAITKSSNSSAQLSSSSLKDGHSCSFEFEFSGRFGSNGSGSVGSM 124

Query: 121 SSLGYLGVTARL------------QGFVAIVGSGREDEEDEGGEIVGFVRGREL 146
           SS   L +  ++            Q    ++    EDE+DEGGEIVG+VRGR+L
Sbjct: 125 SSADELFLNGKIRPMKLSTHLEQPQVLAPLLDLEGEDEDDEGGEIVGYVRGRDL 178

BLAST of Lcy09g021450 vs. NCBI nr
Match: XP_023545281.1 (uncharacterized protein LOC111804739 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 148.7 bits (374), Expect = 4.4e-32
Identity = 91/174 (52.30%), Postives = 108/174 (62.07%), Query Frame = 0

Query: 1   MDLQTSNNGSEILVSDIKIELQESINGGPHGYHELQSIFEDIDNACSTHYVSAPWSPDHG 60
           M+LQTSNNG EIL SD+K ELQE  NGG HG HE Q+IFED+D+ACST YVSAP SP   
Sbjct: 5   MELQTSNNGGEILDSDVKTELQEPNNGGHHGVHEPQAIFEDVDSACSTPYVSAPSSPGRS 64

Query: 61  PVDGYCYNTLASPMHFTITKSSMSLAQLSLSSLKE----------SIRFPSN-------L 120
           PV G+ Y+  ASPMHF ITKSS S AQLS SSLK+          S RF SN       +
Sbjct: 65  PVGGFYYSAPASPMHFAITKSSNSSAQLSSSSLKDGHSCSFEFEFSGRFGSNGSGSVGSM 124

Query: 121 SSLGYLGVTARL------------QGFVAIVGSGREDEEDEGGEIVGFVRGREL 146
           SS   L +  ++            Q    ++    EDE+DEGGEIVG+VRGR+L
Sbjct: 125 SSADELFLNGKIRPMKLSTHLEQPQVLAPLLDLEGEDEDDEGGEIVGYVRGRDL 178

BLAST of Lcy09g021450 vs. TAIR 10
Match: AT3G62630.1 (Protein of unknown function (DUF1645) )

HSP 1 Score: 45.1 bits (105), Expect = 6.4e-05
Identity = 35/93 (37.63%), Postives = 50/93 (53.76%), Query Frame = 0

Query: 19  IELQESINGGPHGYHELQSIFEDI--DNACSTHYVSAPWSPDHGPVDGYCYNTLASPMHF 78
           ++L ES +   HG  +     +D    +ACST +VSAP SP  GP  GY ++  +SPMHF
Sbjct: 1   MDLVESFS---HGDPDTPRFSDDFGSGSACSTPFVSAPSSPGRGPPPGYFFSAPSSPMHF 60

Query: 79  ---TITKSSMSLAQLSLSSLKE-SIRFPSNLSS 106
              + + SS +  +L  SS  +    F S LSS
Sbjct: 61  FLCSASSSSENPKKLDTSSCGDFEFDFSSRLSS 90

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DRU55.6e-3352.30uncharacterized protein LOC111023263 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A6J1KEN64.7e-3251.72uncharacterized protein LOC111493647 OS=Cucurbita maxima OX=3661 GN=LOC111493647... [more]
A0A6J1G3P11.1e-3151.72uncharacterized protein LOC111450471 OS=Cucurbita moschata OX=3662 GN=LOC1114504... [more]
A0A6J1HL822.6e-3048.28uncharacterized protein LOC111465566 OS=Cucurbita maxima OX=3661 GN=LOC111465566... [more]
A0A0A0LIY68.4e-2948.84Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G033880 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
XP_023537879.16.8e-3351.72uncharacterized protein LOC111798784 [Cucurbita pepo subsp. pepo][more]
XP_022156347.11.2e-3252.30uncharacterized protein LOC111023263 [Momordica charantia][more]
KAG7030126.14.4e-3252.30hypothetical protein SDJN02_08473, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6599192.14.4e-3252.30hypothetical protein SDJN03_08970, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_023545281.14.4e-3252.30uncharacterized protein LOC111804739 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
AT3G62630.16.4e-0537.63Protein of unknown function (DUF1645) [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy09g021450.1Lcy09g021450.1mRNA