Lcy09g020980 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy09g020980
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Shikimate kinase
Location	Chr09: 46492286 .. 46504201 (+)
RNA-Seq Expression	Lcy09g020980
Synteny	Lcy09g020980

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTGCGGCATCTCCAAGTCGTTCGACCCCAAGGAGGTAGTCGAAGCCTCGCCCGATCATTTCCCCCACAATAACCCTCCCTTTTGTTCCTACAAGTCCACCACCTCCAATTGCTTCACCGGGGAATCTAAGCCTCCCTTGGTCCAACAAGGACCTAATTACTATCATCATCATGTCTCCTCCTCCTCCGACGACCGCTCTCGACCGCGCGACTCTTCTCCCGTCAAGACGAACAACAACGTCAGGCGTGGAGAACCGATGAAGGGTGAGAAAGTCGCCCGCAGGATGGAGTTTGAAGATGATCGTAGTGACGATGAGAGGGACAACGATGGTGATTTGGATTCTCGTGAGATTTGCCGAGGAGGATCGCCCAGTTTCAGGGAGTACTGCATTGACTCCGACTCAAGATCAAAAAGCATGAAGAGCGATGGTAATTTTCCAACTTGAAATTTTGACCTTGGGGTCGGTTTGGAATACCTTTCAATTTAAATGTTTTTCAAGAATGCATTTTATTTTAAACATTTTGTATAAAAATTGTTTAGAATTTAAACGGTGTGGTATGTTTTGGTTATATTTCCTGTTCATAAGTCTTTTTTATACACAAATTATGGTGTGTTTGGTTTAACTTTTCAAGTGTTCAATTTTGAAAAAAAAAAAAAATCATTTTGAAAAAAATTATAGTGTTTGACAACCACTAAAAATGTTATTAGAAAATGAGATTGAGAAATAAACAATTTTGAGAGAAACACTTGAAACCAATTTTTTAAAAAAAGAGTCTTTAGTATACAATAACTTGTATAAAAACACCTATGAGGAAATGCAACCAAACATATAAGTGTTTAAATTCTAAACATTTTTTTATACAAAATGATTTTTAAAAAATGCATTCTTGAAAAATATTTAATTTAGAATGTATTCCAAACGGACTCTTATTATATACTAAAAACTCTTTTTTAAAAATTTGCTTTTAAGTGTTTTTCTCAAAATGTATCTCATTTCATTTACAGTGGTTGTCAAACACTATAGTTTTTTTTTTTTCAAAATTAAATACTTGAAAAGTTAAACCAAATATACTCTTAACTAGTTGAGCTATGTTTAGGTTGGTCAATCAATTTAAACAAGATTGGTTGTCGTATTTGTAAATTTGTTACACTAAGAAAAAAAAACAATTCGTAAATATGATGATTTTTGTTTAGATGATGTAATAATTTTATATTATTGATAAAGTATATAAATTTAATAGTGATGGTCTTATTTTGAACAGATCTATGTGAAGGGGGTCAGTGCAAGTGGTCAAGTGAACGAACGTTAAATCTAGAGAAGGAAAAGGTACTTTCCATTTCAGCTTCTTGATTTCATTTGTTGTACAATTTTTGTGTGAAACTCAAAAAAAATATATGTATATATAATAATTATTATAAATAACTTTTTTGTGTGTGTATCTTTTTTAATTAAAAATAAATAAATAAATAAACTTAAGTCTCCTAAAACATTAAATAATTTGAGAAGCTAAGGTTATGTTTTATTTTATCCCCTCAATCAACTATTAGATTTGTTTTTTTAAAAAAAAACAATAATATGCGGGTAAGGGGAGAGATTCAAACCCTCTAACCTTTTGGTCGATGATATATACCTTAAACAGCTAAGTTATGCTCAAGTTGAAAATATCGATGGAAATATCGATAAAATGTTGATGTTGACGGATATTTCTGAAAAAATATTTAAAACAAATCAATTCAAATAAATGCATTTTTAAAATAAGTTAAAATACTTATTATTAATATTATATCCATATCTAGCTACATTTCATTATTATTTCCTTTATATTTTATCGATTTCTTAACGGTATAACGGAAATGTCTATTCTCCCTTCATGTCGATGACAAACTCATGGGCATGTGGAAATGTCGACATGTCGACGGAAATTTAGTACATAAAAAACCCTAATTTTACATCGTTGGATGTTTGAGGGAGAAACCAAATAGTTTCTCAAATCTCCATCCAACGATTATTAGGAGACAACTATATCGTAGGAACATCATTCAATAATGTTTTCTTCATCGGGTCATTAGTTCAAATCTTCACGAACATTCTTATGTTTTTTTTTAATTAATGAAAAAATATTTTCAAGCAGGGACTAGAAAATGAGATGGGGAAGAAAGAACGAAGAGGAAAAGGCATAAGACAGGCATTACAACGCGGCAGATCAGGCGGAATGAGGAACTTTTTAAGCGCTTCACGTCGTCAACAACAACACCAAAACACCGATTTTCCTTCTCCCAACCATGACAGTTCCCAAAAACTACTTGCCAAAGCCTCCTGATTTCGGGAAATTATTAGGCACTCCCGGTGCAATGTTTTAGGTAGTTTTACACCGTTGGATATAAGAGAGAGAAATTGTAAAAGTACTTCAATTTTGTATCCAACGGTTACTAGGAGACTGACAAATTTGAAGATATACATCCAACGGTGTAAAATTACCCGGAGCATTACACCGAGAGTGCACCTGATAATTTTTCCTTGATTTCCTTTCAATTTTTAAACAAATTAAAAACACATGTATCTTCACACACATATACACTTTTAATTTTTTTTCTTCATTCCATTTTTATTTTCATACCATTTCCATTTCCTTTGTTCATCCAATGCAAATATCAGTGTAAAAACAATTCAACATTTGAATTGGTATATAAATTGATTTTTTTTAAGAAAAAAAAAAAAAAAGAATTATGTCCATGCGTGCGAGAAATTTCGTCTATTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGAATTATGGTAGATTGATGATGGATGATGGTTAAAAATCACCTTTGGTCGTTGACTTTTCATGAAAGTAACAACTTAGAGCATGTTTGGGAGTAATTTTAAAATGGTTAAAATCATTTTGTCATATTTAAAATCATTTTGAAATGTGCCTTTAATAATTCAAAATCAATTTTGACGGTAAAATCAAACATGAAAGTAATTTTGAATGGTTAAACGTAAGTTTCGAGGTGATTTTGAATATGACAAAAGTGATTTCAGCCATTTTGAAATCACTTCCAAACATGCACTTAGTCCCTGAATATTAGTTTATAACGATTGAATCTCTATACTTATGATTTTGCAACAATTTAGCCCTTTAACTTTCTTATGTAACAATTTAGTCACTGTACTCTAAAAATTGTAACGATTTAGTCTCTATCGTTAAAATTAATGTTAAGATTTAATAAAATTTGTTACATATAGATTAATAAACTAATTTTGGACCCGACATGTTTATAAGTTACAAAGGCTAGACATTAACTAATAAAATCGAAATTTAATTTTAATGATTCTTTTTTTTTGCGGCAATGATTAAATTGTTACAAAATTGAAAGTACAAGGACTAAATCGTTGTAAATCTAAGTTCAAGGACTAAATTGATACTTTCATGAAAGTTCAATGACCAAAAGTGATTTTTAATTTTAATTTAATAATATTGATATGAGAAGATTTTACGTTTTATCAAAAACATTTATCTCTCTGTTTGGAATCTGGAAAATATGAGAAATGATTTAAAATTCTTTATCTAGTTTGGAATTAGAAAATTTGAAATGAATGTTCTGACATTTTTGTGTTTGGATGATAGATGGAAAAGAAAAGAATTAAAAAGTTTAGTAATATAAATCTTTTAATCTTGATTTATTAATGGAAAAATATATATATCACAATGTTAAATTAGTAATTTAATGAAAATCCTCCAAAATCAGATTATTTTAGTTAGGTAAAAATGTGGTTTACAATCCTCCTTTTCATAACAAACAACAAAATTCAGACTAAAAACAACAACAAAATTGGTTTGAAATCTGATAGGATTTGAAATTTCTCCCGATCGCGAACAATCAAACATACCATTAGTTTCATCCAATGAAACTTTAAACTCCAAATTGTATTCCACATTTTTTTTTTTAACAATTGTTGTAGAATAGCCCCTTTATTAAAGCGTTTCAATAATTTCAAATCGACCACAAACATACCGATACCAATTTTAAATCTTCGTTAGCTTGAGAACATAATTCAACCAAGCATTACAACTTAACTACCTTACGTATCTATAATCTATAATCTATAATCTATAATCTATAATATATATAAAAGTACGAATGTGGAAGAAACTTATTTTGGACAATGTTATCCTTTAGTTTTCACTAAATACCTAATATACCCTTAATTAAGTATAATATGTGGCTCTTCATAAATTGTCATTATAAATTAGAATTAAAGTAATTTAATATTAATCAATTGATAATAATTTTAAGGAAAATGCATGCATGTGCCGAAATGTATGTGTTTTTGAATTAGTGACTTTTTAGCTTTGTTATATTACGGTGTGGCTTTTCATTTTAAGGAGAAGTTCATTAATTTTCTTTTATTTTTTTATTACCATTTAATTACATTCAATTATAGAAGTTCAAAGATTTTAGAATTTTAAAAGGTTTTATAACACTTTCATCTCCTACCAGTATAAAAAGTTCTCTTCCACTCTTTTCAAGCAACAACTGGAAGATCATTTTTTTATTCTTATTCTTTTTTATGGTTTTCTCTCTCAAGATTTTTATATTTTTTTAGGTTTTTTTTTAATATGCAATAAAGCACTAACCATTCCAATTTTTTCAAACAGTGTTGTTTAGTCGCGTTCAACATTGGTGAAAGGTAAGTTTATTCTTTTAAATAATTATACAATATATATACACCATGATTTTTCTTCTTCACAATTATTTTGTTTCTAAAATTTTGAAGATTTGCAATACTTAAAATTTACATATTTTATTTTTAGTTATATTGTGTTTTTTCTTCTCTATTTTGTATGTAACGAATGCTTAAAATTTTACAAAACATTGAAAAATATAAATATCTTATCTTTTTAATATTTTGCCAATAAATTTATGTATGTATGGTATATAGTTTTAATTTGGTTCTTATCGTTTCAAAAATATTCATTTAGTCCCTATAGTATAGGTTTAGTTTCAGTTTGGTACCTAAGGTCTTAGAAGTTTTCAATTTAGTCTCAATAGTTTAGTTAAACCTCATAAATCATTCATGTCTTTATAGTACTATTTTTTACATCATAAAGGTATGGTATTGGTACAATATTTTTATAAATATTGGTATAGTATTGTTTTTTTTTTACCATATTGGTCCATATTATTGATTTTATACATAGTCGTTATAATATATTTAGCTTATAAATCATTCATTTGCATTTTTCAAAATGGTATATGTAGATGGTTTGCATTCTTTTTTCATTTGATTTATATTTTTACAAACTAAATAATAAAATGCAAATGGGTTTTTTAAATTGCAAATGATAAAATGTTTTCAAAAACCCATTTTAATTTTGCATCTAGATCATATTATATTATTTGATTTTTCTTTATTATTATTAGTTAACAAGTCTTTTTGTTTTGTTTTTGGTTTTCGTTTTTAAGAATATAACATTTTTTTCTTTTTATTCTAAAGATAACAATATAATAAAATAAATATATTGTAGTTTTATATTTTATAGTTTTTAAACATATTAGTTTTATCAAATTGTATATGTTATATGTTATATTAAGGTCAATATATACACCATTTCACATCCATTTCATATGTAAATTTAGTTCTATTATCTTTTGTTTTACAATTATTTTAGAGTTAGTAAAATATGTTCCACATGATATATAGAACATGATAGTTTTGATTTATCACGTCCATCCATTTCTAGAGGCCGGTGACTCAAATCTCTCACTTACATGTTATTAAAAAAAATCTCTAAAATACTATTAGTATCTATCTATATATATAAATATTAGGCTAAACTATAAAAAATACCCCTGAACTATTGTGTTTGTTTCAAAAATGCCCCTGAACTTTAAAAAGTTTCAAAAATACCTTTGAACTTTGAAAAATGTTTAAAAAATACTCTTTTCGTTAATTTTGGATGAAAACCGTTAAAATTTCAGTTTCAAAAATACCCTTGAACTTTAAAAAAAAAAAAATTCAAAAATACCCTTATTGAAAAATGTTTTTTTTTTTTTCCTTTCCCCACCATAAATTAATTCTTCCTTCATGAAAATTAATGAGAAACTTTACTTATTTGTCATGTATTTATAATCTATAAGCTTTTCTTATCTTCCAACATATCCCAATAACTTGACTAGATTTTCGTGTTGAAACTTCAAGATAACTTTCGTTTTGTTCTTGAAATTCTACATGTGCTTGACTATATTTGTTGGTAGTCTTTTCAATATTATTTCCTCACCAACCATTACCCATTAGCTTTCTCTATATTCATTTTATGAAAAAATAAATGAAACTATTGTTGTATACGAGTTCTAACAATTCTTAAATATTAATAAGAACAAAATCATATATAAAACTTTTGATTAATTAATCTTATAAATTGGACCAAACCCACAGTCTTAAATGTTATGTAATATGTATAAGTACAATCAAATTTAACCGTACTGAAAAAACCTTAACTCATATATTTTATGAAATCGAAAGCATTTAAATTATTTTATTGAAATTGATTATAATATTTAATTTCTCTTCTTTTGTGAAACAATCACAACATTATTCAACTTTTAAAACAAATTCATTGTAATATATAATAGCACAAAAAGATATATCACGTGCAACCACGTATTAAAGACTAGTTGTTATTAAAAAACAAAAATAAAATAAAATAAAATAGAATGTTATAATTTTGAAATTTGCACCCGTCACGAAGATTTTAACAATTTTTTTCAACAATATATGAAGTAGGGATTCAAACCACTCTTGATACATATGTTTTTTTTTTTTTTTGAGATATCGATACATATGTTATTTTAGCTATGTTCATGCTTGTATTATTTTCTTTGTCAAAGTAAGCGTAGGTTGGTGATAATTCACATGTATCTTTAATGAAAAGGTCAAATATTCGAATTCTCACAAATGTTGTTCAACTAAAAAAAAGCTTGCATTGTCAAAAAGAAGGAAAAAAAAAGATTAAAAATCACTTTTATCCTTAAACTTTCATGAAAGTAACAATTCAGTCTATGAACTTTGATTTGTAACGATTTAGTTCCTCTACTTTCAAATTCGTAACGATTTAGTCCCTATCGTGGAAATTAAGGTAAAGATTTAATGAAATTTTTTACATAAATAAATTAATAAACTAATTTGGGACCCAATATTTTTATAAGCTACAAGGTTTAAAATAATAAAAAACGACATTTAATTTTAATTTTTTTTTTTTTTTTTTGCAACAAGGATAAAATTGTTACAAATTTGAAAGTACAGAAACTAAATTGTTACAAATTTGAATTTATAGGGACTGTTATGGGTGAATTTGGACCTAATTCTAAGAAGGTTGGAATAAGAGCCTAGAGTAGAAACAAGCCTAAGGAGACCCAAGTCAATCTCTAGGGTTATTCCCCCTAAAAGGAAGGGGGAAACCCTAATTCAACTATAAATAGAAGATGCTAACCCCAAGGTTTGGGGACTCAACTAGGTAATTACTCTTTCTCTATAATTCTTAATTGGTTTGCTTCACTTATGATCTCCCAACTGACTTAAGCATCACTGATGTGTAAGGTGAGTTCTGTCTGGATTTTGGCGGGACTACATGGACTAAATTGTTACAAAATTGAAAGTCAATAGACTAAATCGTTACAGATCAAAGTTGAAGGACCAGATTGTTAGTTTTGTGAATGGTGAGGGACCAAAAGTGAATTTTATAACAATTTGTATGCATTATTATCCACACTAATAGTTAATGCGGAAAATGAAATGGACTCGGGCCGGTGACCGTGGAACTGGGAAGGATAAAGTGCTTTCTGTGAAGCGTTTCCTGTCCTGAGAGAGCTTCTCATGGCGATGAAAACCTCCGTTTCTCCACTCACCGATCTCCAATTCAATTTCCACTTGCCAAAAATTCAAGCAATGTTTCTGAATCCGAGCTGCTCCTTGTCCCTGCCATCCTCTGTTCGTCGTAATCACAACCTCCCACTCCATTTTCGTCGACGATTTCTCCACTCTTATCGCCGCAGATCTCTCTCATCGACTTGCTTGGTCTCAGACGGAACTGCATTCAGTGAGTTCAAGTTTCGAATCCATTTCCCCCGTAAAGTTACTTTGTAATCTCACGACGACTCGAATTTTTCCGTAGTTCGTACAACTTCGTTTTACTTGGGTGAATTCATAGAAATAGCGTTTGGATTTTCTCTAATGAATTTTGATTCAGTTCGATTGGTTGATGAATGATGTCTCTGCTTTAGGATAGTGCAGTTCATTGGTTCAGTTCACTTAGAACTGGATTCCTAGGTCACCAATGCTGTTTGCTTGTAAGTCATGGACGCTATATTGCTAGAAATCGAGATTGACCGATGAAACGGAGCCTTAGTTAGTTCAATCTGAATACTGCTGCAAATAGATGCAATTCGGTGAAACGCTCTTGCTTTAAGTTGGAGACTGGAGTTAAATTGATATCCAATTCAGCTAATTCAAATCTATTTAAGAATAAGAATGTAAAGGATGAATTGTCTAGTTTGAGCTTCATCTCTCTTTACTCAGTGATTTATCTTGGCCTTTGTTAGATGTGGAGGCGAAGGTCACTGTCGATGATCTGTCTCTTGAAGTGAAGGTTAGATGTCGTTTCTGTAGCCTCAAGTTTCCATATTACAGTGAACTGAAAAAATGGAAGAAACATAAGTTTTTGTTATATAATTAGCAAAGCTCAGAGAATCGTTCTTTTACTTCGTTTTTTTGCTCTATTTAAGTCTTGTGTCGTGAAAGTGCATTGAGATTGGTTCTAGACTCTAGTTGGCTTCATTTTCTTGTGGCTTGAAGTGTTTATTTACACTGTTCAGTTTGAATTCAGAAGAAAGCAATGGATGTAGCTCCTGAATTGAAAGGAACTTCCATCTTTCTCGTGGGTAAGCACTGATCTTCTATTTTGGGGCAATTTAGATTTATAACAAACTAATGCATGAAAAAAAAATATGTGAAGGGATCAACAGCTCCATAAAATCTAAGTTGGGGAAACTCCTTGCTGATATTTTGAGATACTATTACTTTGACAGGTACTTATAGAGGTACTTTTTCTTTTTTGGCACTCGGTACTGCTTTCCTTCCTAACATTGCTAATTATGAATTAATATGTCATATGCAAATGCATATAGTGATAGTTTGGTTGTGGAAGCTAGTGGTGGTGCGGCTGCTGCCAAACTTTATAAGGAGAGTGATGAAAACGGTTTTCGGGCGTCTGAGGTAATTATCTCATGTTTATAGGTTATGCTTTGTTACATCTGCTTAGAAGTTATTTGGTCAGAACTGGTAGTTTAGTAGCATCTTTTTGGACTCCATTTTCTAGAATTTTTTTCATTATTGGTTACTGGTGTTTGATGAATGGGTTTTTACTTATTAGTGATTGAGCCCATGAAAACATCAAGGCTCATGTACCTGAGGTTGAGGGCTCTTATTGAATTCATTATAGAATCTAGTCAAAGGCCCCTGACATGCCATTTTGTTGCAGACTGAAGTGTTAAAACAATTATCTTCTATGGGTCGATTAGTCATATGTGCTGGAAATGGTGCCGTTCAGAGCTCTACTAATCTGTATGAGAATGTTCAATGCTCAATTTTCCTGGTTTAGTGCACACATTTTTCCATGAAACTGTTATTTGTAGTAACCTAAAGCAATTTTTAGTATTATTATACTCATGTTGCTCTTTGATAAACATTTTACATGCAGGGCACTTTTGAGGCATGGCATAACATTATGGGTTGATTTACCCCTACAGATGATAGCAGAGGAATTGGCTGAAGATCGTAGCGAACTTCCTGTATTTGATATATCTACTTCTGGATCTTATACAGAGGTAATCAAGGGTTTGAGTGAACTTTGAAGGTGGTTTTCAAAATAGTTTTAAACTTTTTTTTACTCCAGTTTTAAGAACGGCAATCTAGTGTTTCAATAAGGTCAGAGTTATTTTGCACTTGAAATTGCTATTTGCAAATCTATGATTTTGAATAGAAGAATATTTTCATTTTTTTCTTAGAAAACAGGTCATCTAAAAAAAAATTGAAAAAACAGTTATTTGAACATGTTTTTTAGAATTATTGTTCTAAAATTTAGAAAACTGTCATGAATGGATTCTTCAAATCAAGTCCTAGATTTTCAATTGGGTTTTAAATTTCACCTTTCTTGTTCTTGGTGCATTGATTTGAGACCATAGACATCCTTCATTCCTCTGGCTATTTTTGTGTAACACAGGTGCTGGCTCAAATAACTTCACTCTACCAAGAAATAAAAGATGGCTACGCCACGGCTGATGCTTCAGTATCACTTCAAAGTATGTGATTCTGATCCTTCCCGCACTTGCAATATTCCAGGCTTTCATGCATATTCTGACTTCTAACACCTCCGTGCCTCACAGAACTAGCAAGCAAATTAGGATACGATGACTTCAATGCTGTCACAACCGAAGACATGGCTTTAGAGGTGTGCATCCTTACAGTATTTATACTTGTCTACATCAATAACAGGGGTGGAACTATAAATAAGAAAGGAGCAAATTTTAAAAACTAAATCCCTAAACTTATATGTTTGTGTCTACTCGCCTCTGAACTTTAAAAAAGTATTTTCAATTGTGTCAAATAGGATTCTAAACTTTAAAAATGATATATAAGTCCTTCAACTTTCAATTTTGTGTTTAATACATCATTGATACATTCAATAATTTTTAAAGTGAACAACTTTCAACAACATTTGGAGACAATGATTTGAATCTCTAACCTCTTGGTTAATAGTACATGTCAATTATCAATGAGCTATACCCACTTTAACTTAAAACGAACAAATCTATTGGACGTAAAATTGAATTTTGTGTTTAATAGGACATTAAACTTTCAATCTTGTGTTCAATAGATTTAGGAGTCGTTTGGCCCTCGGGTTTGGAATGGGTTGGAATGGATGGAAAGGGATGCCCATGTTTGGTTGGCCTGGAATGGTGTGGGTTTGGAATGAAATGGTGGGCATGCGGATTCCAATCCATTCCCACATTTTGGTGGGTCCCAGTATTTTTCTCTCCATTTTTCTTCATAATTTTGATGGGACCCACAATTTCTTTTTCTATTTTAACCACATTTTGGTGGGTCCCACTATTTCTCTCTCCATTTTTTTTCATAATTTTGGTGGGTCCCACTATTTCTCTCTCCATTAATTTCAACCCAAATCAAATGCACCAAACACAGGCATGGAAATCATGATTCCAACAAAATATTTCCATGGGAATCACATTCCATTCCAATCAAATTCCGGCGCACCAAACGGCCCCTTATTGGACACAATTGAAAGTTTGAGGACTACGGCACAAAATCGAAAGTTTAGAGATTTATTAAACACGTTTTAAATTTCAGAGAACTTTTAGACACAAAATTGAAAGTTCATGTACCTATTTACCACCAACTCTTTCTCCGAATCCTTAAAGTTACAATGTACCAGATGATTTATTATGTTGGGATGTGTTAACAGGCTTTGAAGGAGATAGAAAAACTGACGAGAGTGAAGAAGATGATGGAAGCAGCAGCAAAACCTTTTTAACCATAAATGCAGCTTGTGTTCTATGGTGTCCACATAATAACAATTTAGACCTGATTGGGAAGCTTTTTACCCCTCTGGGGTAAGTTATTCTGATCTGAGCTGTGTAAAATAACCTTTCTCATGCTTGTTAAATATTCACCACGCAGTTTTCTCAACTCATTAGTAGTGTACTTGTACTTTCAGGAAATTTCTAAAAAGTGAGGACTAAACTAGTGTAGTGTCTTGACAATCGTGTCTTACTCACGATTCATTTGAAAATGGGCCATATTTACCTCTGTAGTACG

mRNA sequence

ATGGGTTGCGGCATCTCCAAGTCGTTCGACCCCAAGGAGGTAGTCGAAGCCTCGCCCGATCATTTCCCCCACAATAACCCTCCCTTTTGTTCCTACAAGTCCACCACCTCCAATTGCTTCACCGGGGAATCTAAGCCTCCCTTGGTCCAACAAGGACCTAATTACTATCATCATCATGTCTCCTCCTCCTCCGACGACCGCTCTCGACCGCGCGACTCTTCTCCCGTCAAGACGAACAACAACGTCAGGCGTGGAGAACCGATGAAGGGTGAGAAAGTCGCCCGCAGGATGGAGTTTGAAGATGATCGTAGTGACGATGAGAGGGACAACGATGGTGATTTGGATTCTCGTGAGATTTGCCGAGGAGGATCGCCCAGTTTCAGGGAGTACTGCATTGACTCCGACTCAAGATCAAAAAGCATGAAGAGCGATGATCTATGTGAAGGGGGTCAGTGCAAGTGGTCAAGTGAACGAACGTTAAATCTAGAGAAGGAAAAGGGACTAGAAAATGAGATGGGGAAGAAAGAACGAAGAGGAAAAGGCATAAGACAGGCATTACAACGCGGCAGATCAGGCGGAATGAGGAACTTTTTAAGCGCTTCACGTCGTCAACAACAACACCAAAACACCGATTTTCCTTCTCCCAACCATGACACGTTTCCTGTCCTGAGAGAGCTTCTCATGGCGATGAAAACCTCCGTTTCTCCACTCACCGATCTCCAATTCAATTTCCACTTGCCAAAAATTCAAGCAATGTTTCTGAATCCGAGCTGCTCCTTGTCCCTGCCATCCTCTGTTCGTCGTAATCACAACCTCCCACTCCATTTTCGTCGACGATTTCTCCACTCTTATCGCCGCAGATCTCTCTCATCGACTTGCTTGGTCTCAGACGGAACTGCATTCAATGTGGAGGCGAAGGTCACTGTCGATGATCTGTCTCTTGAAGTGAAGAAGAAAGCAATGGATGTAGCTCCTGAATTGAAAGGAACTTCCATCTTTCTCGTGGGGATCAACAGCTCCATAAAATCTAAGTTGGGGAAACTCCTTGCTGATATTTTGAGATACTATTACTTTGACAGTGATAGTTTGGTTGTGGAAGCTAGTGGTGGTGCGGCTGCTGCCAAACTTTATAAGGAGAGTGATGAAAACGGTTTTCGGGCGTCTGAGACTGAAGTGTTAAAACAATTATCTTCTATGGGTCGATTAGTCATATGTGCTGGAAATGGTGCCGTTCAGAGCTCTACTAATCTGGCACTTTTGAGGCATGGCATAACATTATGGGTTGATTTACCCCTACAGATGATAGCAGAGGAATTGGCTGAAGATCGTAGCGAACTTCCTGTATTTGATATATCTACTTCTGGATCTTATACAGAGGTGCTGGCTCAAATAACTTCACTCTACCAAGAAATAAAAGATGGCTACGCCACGGCTGATGCTTCAGTATCACTTCAAAGTATGTGATTCTGATCCTTCCCGCACTTGCAATATTCCAGGCTTTCATGCATATTCTGACTTCTAACACCTCCGTGCCTCACAGAACTAGCAAGCAAATTAGGATACGATGACTTCAATGCTGTCACAACCGAAGACATGGCTTTAGAGGCTTTGAAGGAGATAGAAAAACTGACGAGAGTGAAGAAGATGATGGAAGCAGCAGCAAAACCTTTTTAACCATAAATGCAGCTTGTGTTCTATGGTGTCCACATAATAACAATTTAGACCTGATTGGGAAGCTTTTTACCCCTCTGGGGTAAGTTATTCTGATCTGAGCTGTGTAAAATAACCTTTCTCATGCTTGTTAAATATTCACCACGCAGTTTTCTCAACTCATTAGTAGTGTACTTGTACTTTCAGGAAATTTCTAAAAAGTGAGGACTAAACTAGTGTAGTGTCTTGACAATCGTGTCTTACTCACGATTCATTTGAAAATGGGCCATATTTACCTCTGTAGTACG

Coding sequence (CDS)

ATGGGTTGCGGCATCTCCAAGTCGTTCGACCCCAAGGAGGTAGTCGAAGCCTCGCCCGATCATTTCCCCCACAATAACCCTCCCTTTTGTTCCTACAAGTCCACCACCTCCAATTGCTTCACCGGGGAATCTAAGCCTCCCTTGGTCCAACAAGGACCTAATTACTATCATCATCATGTCTCCTCCTCCTCCGACGACCGCTCTCGACCGCGCGACTCTTCTCCCGTCAAGACGAACAACAACGTCAGGCGTGGAGAACCGATGAAGGGTGAGAAAGTCGCCCGCAGGATGGAGTTTGAAGATGATCGTAGTGACGATGAGAGGGACAACGATGGTGATTTGGATTCTCGTGAGATTTGCCGAGGAGGATCGCCCAGTTTCAGGGAGTACTGCATTGACTCCGACTCAAGATCAAAAAGCATGAAGAGCGATGATCTATGTGAAGGGGGTCAGTGCAAGTGGTCAAGTGAACGAACGTTAAATCTAGAGAAGGAAAAGGGACTAGAAAATGAGATGGGGAAGAAAGAACGAAGAGGAAAAGGCATAAGACAGGCATTACAACGCGGCAGATCAGGCGGAATGAGGAACTTTTTAAGCGCTTCACGTCGTCAACAACAACACCAAAACACCGATTTTCCTTCTCCCAACCATGACACGTTTCCTGTCCTGAGAGAGCTTCTCATGGCGATGAAAACCTCCGTTTCTCCACTCACCGATCTCCAATTCAATTTCCACTTGCCAAAAATTCAAGCAATGTTTCTGAATCCGAGCTGCTCCTTGTCCCTGCCATCCTCTGTTCGTCGTAATCACAACCTCCCACTCCATTTTCGTCGACGATTTCTCCACTCTTATCGCCGCAGATCTCTCTCATCGACTTGCTTGGTCTCAGACGGAACTGCATTCAATGTGGAGGCGAAGGTCACTGTCGATGATCTGTCTCTTGAAGTGAAGAAGAAAGCAATGGATGTAGCTCCTGAATTGAAAGGAACTTCCATCTTTCTCGTGGGGATCAACAGCTCCATAAAATCTAAGTTGGGGAAACTCCTTGCTGATATTTTGAGATACTATTACTTTGACAGTGATAGTTTGGTTGTGGAAGCTAGTGGTGGTGCGGCTGCTGCCAAACTTTATAAGGAGAGTGATGAAAACGGTTTTCGGGCGTCTGAGACTGAAGTGTTAAAACAATTATCTTCTATGGGTCGATTAGTCATATGTGCTGGAAATGGTGCCGTTCAGAGCTCTACTAATCTGGCACTTTTGAGGCATGGCATAACATTATGGGTTGATTTACCCCTACAGATGATAGCAGAGGAATTGGCTGAAGATCGTAGCGAACTTCCTGTATTTGATATATCTACTTCTGGATCTTATACAGAGGTGCTGGCTCAAATAACTTCACTCTACCAAGAAATAAAAGATGGCTACGCCACGGCTGATGCTTCAGTATCACTTCAAAGTATGTGA

Protein sequence

MGCGISKSFDPKEVVEASPDHFPHNNPPFCSYKSTTSNCFTGESKPPLVQQGPNYYHHHVSSSSDDRSRPRDSSPVKTNNNVRRGEPMKGEKVARRMEFEDDRSDDERDNDGDLDSREICRGGSPSFREYCIDSDSRSKSMKSDDLCEGGQCKWSSERTLNLEKEKGLENEMGKKERRGKGIRQALQRGRSGGMRNFLSASRRQQQHQNTDFPSPNHDTFPVLRELLMAMKTSVSPLTDLQFNFHLPKIQAMFLNPSCSLSLPSSVRRNHNLPLHFRRRFLHSYRRRSLSSTCLVSDGTAFNVEAKVTVDDLSLEVKKKAMDVAPELKGTSIFLVGINSSIKSKLGKLLADILRYYYFDSDSLVVEASGGAAAAKLYKESDENGFRASETEVLKQLSSMGRLVICAGNGAVQSSTNLALLRHGITLWVDLPLQMIAEELAEDRSELPVFDISTSGSYTEVLAQITSLYQEIKDGYATADASVSLQSM

Homology

[Close]

BLAST of Lcy09g020980 vs. ExPASy Swiss-Prot
Match: Q9LW20 (Probable inactive shikimate kinase like 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SKL1 PE=2 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 1.2e-46
Identity = 99/172 (57.56%), Postives = 129/172 (75.00%), Query Frame = 0


Query: 316 VKKKAMDVAPELKGTSIFLVGINSSIKSKLGKLLADILRYYYFDSDSLVVEASGGAAAAK 375
           VK+KAMD+APELKG SIFLVGIN+SIK+  GKLLA+ LRYYYFDSD+L+ EA+GG  +A+
Sbjct: 76  VKRKAMDIAPELKGASIFLVGINNSIKTNTGKLLAEALRYYYFDSDNLITEAAGGNVSAQ 135

Query: 376 LYKESDENGFRASETEVLKQLSSMGRLVICAGNGAVQSSTNLALLRHGITLWVDLPLQMI 435
             KE+DE  F+ SETEVLKQLSSMGRLV+CAG+GAVQS  NLALLRHGI++W+D+PL + 
Sbjct: 136 ALKEADEKAFQESETEVLKQLSSMGRLVVCAGDGAVQSLRNLALLRHGISIWIDVPLDIT 195

Query: 436 AEELAEDRSELPVFDISTSGSYTEVLAQITSLYQEIKDGYATADASVSLQSM 488
           A+   +D       D   S    E+   + + Y++ + GY TAD S+SL+ +
Sbjct: 196 AK--GDD-------DSFHSEPSPELFDTLKASYEKSRKGYETADVSISLEKI 238

[Close]

BLAST of Lcy09g020980 vs. ExPASy Swiss-Prot
Match: Q7X7H9 (Shikimate kinase 3, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=SK3 PE=1 SV=2)

HSP 1 Score: 130.2 bits (326), Expect = 6.4e-29
Identity = 71/176 (40.34%), Postives = 112/176 (63.64%), Query Frame = 0


Query: 311 DLSLEVKKKAMDVAPELKGTSIFLVGINSSIKSKLGKLLADILRYYYFDSDSLVVEASGG 370
           D +L +K+KA DV P L    I+LVG+  S K+ +GK+LA++L Y +FDSD LV +A G 
Sbjct: 73  DEALVLKQKAEDVVPYLNDRCIYLVGMMGSGKTTVGKILAEVLGYSFFDSDKLVEKAVGI 132

Query: 371 AAAAKLYKESDENGFRASETEVLKQLSSMGRLVICAGNGAVQSSTNLALLRHGITLWVDL 430
           ++ A++++   E  FR +E+EVL+ LSSM RLV+  G GAV    N + ++ G T+W+D+
Sbjct: 133 SSVAEIFQLHSEAFFRDNESEVLRDLSSMHRLVVATGGGAVIRPINWSYMKKGSTIWLDV 192

Query: 431 PLQMIAEELAE-DRSELPVFDISTSGSYTEVLAQITSLYQEIKDGYATADASVSLQ 486
           PL  +A  +A    +  P+    +   Y +  A++T+L+++  D YA ADA VSL+
Sbjct: 193 PLDALARRIAAVGTASRPLLHQESGDPYAKAYAKLTALFEQRMDSYANADARVSLE 248

[Close]

BLAST of Lcy09g020980 vs. ExPASy Swiss-Prot
Match: Q5NTH3 (Shikimate kinase 2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=SK2 PE=1 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 4.2e-28
Identity = 70/178 (39.33%), Postives = 112/178 (62.92%), Query Frame = 0


Query: 311 DLSLEVKKKAMDVAPELKGTSIFLVGINSSIKSKLGKLLADILRYYYFDSDSLVVEASGG 370
           D +L +K+K+ +V   L G  I+LVG+  S KS + K+LA++L Y +FDSD LV +A G 
Sbjct: 76  DEALLLKRKSEEVLFYLNGRCIYLVGMMGSGKSTVAKILAEVLGYSFFDSDKLVEQAVGM 135

Query: 371 AAAAKLYKESDENGFRASETEVLKQLSSMGRLVICAGNGAVQSSTNLALLRHGITLWVDL 430
            + A+++KE  E  FR +E+ VL+ LSSM RLV+  G GAV    N   ++ G+++W+D+
Sbjct: 136 PSVAQIFKEHSEAFFRDNESSVLRDLSSMRRLVVATGGGAVIRPVNWKYMKKGLSVWLDV 195

Query: 431 PLQMIAEELAE-DRSELPVFDISTSGSYTEVLAQITSLYQEIKDGYATADASVSLQSM 488
           PL  +A  +A+   +  P+ D  +S  YT   ++++ L ++  D YA ADA VSL+ +
Sbjct: 196 PLDALARRIAQVGTASRPLLDQPSSDPYTAAFSKLSMLAEQRGDAYANADARVSLEEI 253

[Close]

BLAST of Lcy09g020980 vs. ExPASy Swiss-Prot
Match: Q5NTH4 (Shikimate kinase 1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=SK1 PE=1 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 3.0e-26
Identity = 66/178 (37.08%), Postives = 110/178 (61.80%), Query Frame = 0


Query: 311 DLSLEVKKKAMDVAPELKGTSIFLVGINSSIKSKLGKLLADILRYYYFDSDSLVVEASGG 370
           D +L +K+K+ +V   L G  I+LVG+  S KS +GK+++++L Y +FDSD LV +A G 
Sbjct: 78  DEALLLKRKSEEVLFYLNGRCIYLVGMMGSGKSTVGKIMSEVLGYSFFDSDKLVEQAVGM 137

Query: 371 AAAAKLYKESDENGFRASETEVLKQLSSMGRLVICAGNGAVQSSTNLALLRHGITLWVDL 430
            + A+++K   E  FR +E+ VL+ LSSM RLV+  G GAV    N   ++ G+++W+D+
Sbjct: 138 PSVAQIFKVHSEAFFRDNESSVLRDLSSMKRLVVATGGGAVIRPVNWKYMKKGLSVWLDV 197

Query: 431 PLQMIAEELAE-DRSELPVFDISTSGSYTEVLAQITSLYQEIKDGYATADASVSLQSM 488
           PL  +A  +A+   +  P+ D  +   YT   ++++ L ++  D YA AD  VSL+ +
Sbjct: 198 PLDALARRIAKVGTASRPLLDQPSGDPYTMAFSKLSMLAEQRGDAYANADVRVSLEEI 255

[Close]

BLAST of Lcy09g020980 vs. ExPASy Swiss-Prot
Match: Q00497 (Shikimate kinase, chloroplastic OS=Solanum lycopersicum OX=4081 GN=SK PE=1 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 9.6e-25
Identity = 72/214 (33.64%), Postives = 121/214 (56.54%), Query Frame = 0


Query: 278 RRFLHSYRRRSLSSTCLVSDGTAFNVEA---KVTVDDLSLEVKKKAMDVAPELKGTSIFL 337
           R+  HS RR  L  +C   +  A  +E+     ++D++   +K KA +V   L G  ++L
Sbjct: 51  RKAAHSDRRVQLKVSCSPQNVQASVLESGCFSASIDEIE-TLKNKAEEVEEYLDGRCVYL 110

Query: 338 VGINSSIKSKLGKLLADILRYYYFDSDSLVVEASGGAAAAKLYKESDENGFRASETEVLK 397
           VG+    K+ +G++LA+ L Y +FD D L+ +A GG   A++++   E+ FR +ETEVL 
Sbjct: 111 VGMMGCGKTTVGRILAETLGYSFFDCDRLIEQAVGGITVAEIFELRGESFFRDNETEVLH 170

Query: 398 QLSSMGRLVICAGNGAVQSSTNLALLRHGITLWVDLPLQMIAEEL-AEDRSELPVFDIST 457
           +LS M RLV+  G GAV    N   +  GI++W+D+PL+ +A+ +  E     P+    +
Sbjct: 171 KLSLMHRLVVSTGGGAVVRPINWRHMHKGISVWLDVPLEALAKRITTEGTKSRPLLHEES 230

Query: 458 SGSYTEVLAQITSLYQEIKDGYATADASVSLQSM 488
              Y   L ++T+L +   + YA A A VSL+++
Sbjct: 231 GDVYDTTLKRLTTLMETRGENYANASARVSLENI 263

[Close]

BLAST of Lcy09g020980 vs. ExPASy TrEMBL
Match: A0A6J1JN35 (probable inactive shikimate kinase like 1, chloroplastic isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111486699 PE=3 SV=1)

HSP 1 Score: 426.8 bits (1096), Expect = 1.2e-115
Identity = 223/263 (84.79%), Postives = 238/263 (90.49%), Query Frame = 0


Query: 228 MAMKTSVSPLTDLQFNFHLPKIQAMFLNPSCSLSLPSSVRRNHNLPLHFRRRFLHS---Y 287
           MAMKT+VSPLTD QFN HLPKIQ M LN S +L LP SVR N NLPLHFRRRFLHS    
Sbjct: 1   MAMKTTVSPLTDFQFNIHLPKIQPMSLNSSYALPLPFSVRCNQNLPLHFRRRFLHSSVIQ 60

Query: 288 RRRSLSSTCLVSDGTAFNVEAKVTVDDLSLEVKKKAMDVAPELKGTSIFLVGINSSIKSK 347
           RRRSL STC VSDGTA+NVEAK T DDLSLEVKKKAMDVAPELKGTSIFLVGINSS+K+K
Sbjct: 61  RRRSLPSTCFVSDGTAYNVEAKATTDDLSLEVKKKAMDVAPELKGTSIFLVGINSSLKTK 120

Query: 348 LGKLLADILRYYYFDSDSLVVEASGGAAAAKLYKESDENGFRASETEVLKQLSSMGRLVI 407
           LGKLLAD+LRYYYFDSD LVVEASGG AAAKLYKESDENGFRASETEVLKQLSSMGRLV+
Sbjct: 121 LGKLLADMLRYYYFDSDGLVVEASGGVAAAKLYKESDENGFRASETEVLKQLSSMGRLVV 180

Query: 408 CAGNGAVQSSTNLALLRHGITLWVDLPLQMIAEELAEDRSELPVFDISTSGSYTEVLAQI 467
           CAGNGAV+SSTNLALLRHGITLW+D+PLQ+IAEE AEDR +LPVFDISTSGSY+EVL QI
Sbjct: 181 CAGNGAVRSSTNLALLRHGITLWIDIPLQIIAEEFAEDRGQLPVFDISTSGSYSEVLGQI 240

Query: 468 TSLYQEIKDGYATADASVSLQSM 488
           TSLYQEIK GYATADAS+SLQ +
Sbjct: 241 TSLYQEIKVGYATADASISLQKL 263

[Close]

BLAST of Lcy09g020980 vs. ExPASy TrEMBL
Match: A0A5D3DET0 (Putative inactive shikimate kinase like 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold318G00920 PE=3 SV=1)

HSP 1 Score: 423.7 bits (1088), Expect = 1.0e-114
Identity = 224/275 (81.45%), Postives = 246/275 (89.45%), Query Frame = 0


Query: 218 DTFPVLRELLMAM--KTSVSPLTDLQFNFHLPKIQAMFLNPSCSLSLPSSVRRNHNLPLH 277
           + FPV RELLMAM  KT+VSPLTDLQFN HLPK +AM LN S SLSLPSS+RRNH+LPLH
Sbjct: 78  EEFPVQRELLMAMNLKTTVSPLTDLQFNIHLPKFEAMALNSSFSLSLPSSLRRNHSLPLH 137

Query: 278 FRRRFLHS---YRRRSLSSTCLVSDGTAFNVEAKVTVDDLSLEVKKKAMDVAPELKGTSI 337
               F+ S    RRRSL S+CLVSDGT+ NVEAKVTVDDLSLEVKKKAMDV PELKGTSI
Sbjct: 138 ICPPFIQSSAIRRRRSLPSSCLVSDGTSLNVEAKVTVDDLSLEVKKKAMDVGPELKGTSI 197

Query: 338 FLVGINSSIKSKLGKLLADILRYYYFDSDSLVVEASGGAAAAKLYKESDENGFRASETEV 397
           FLVGINSSIK+ LGKLLAD+LRYYYFDSDSLVVEASGG AAAKLYK+SDE GF+ASETEV
Sbjct: 198 FLVGINSSIKTNLGKLLADVLRYYYFDSDSLVVEASGGEAAAKLYKQSDEKGFQASETEV 257

Query: 398 LKQLSSMGRLVICAGNGAVQSSTNLALLRHGITLWVDLPLQMIAEELAEDRSELPVFDIS 457
           LKQLSSMGRLV+CAG+GAVQSSTNLALLRHGITLW+DLPLQMIAEE AEDRS+ PVFDIS
Sbjct: 258 LKQLSSMGRLVVCAGSGAVQSSTNLALLRHGITLWIDLPLQMIAEEFAEDRSQHPVFDIS 317

Query: 458 TSGSYTEVLAQITSLYQEIKDGYATADASVSLQSM 488
           TSGSY+EVL QITS+YQ++KDGYATADA +SLQ +
Sbjct: 318 TSGSYSEVLGQITSIYQKVKDGYATADALISLQKL 352

[Close]

BLAST of Lcy09g020980 vs. ExPASy TrEMBL
Match: A0A6J1JQ24 (probable inactive shikimate kinase like 1, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111486699 PE=4 SV=1)

HSP 1 Score: 421.0 bits (1081), Expect = 6.7e-114
Identity = 223/267 (83.52%), Postives = 238/267 (89.14%), Query Frame = 0


Query: 228 MAMKTSVSPLTDLQFNFHLPKIQAMFLNPSCSLSLPSSVRRNHNLPLHFRRRFLHS---Y 287
           MAMKT+VSPLTD QFN HLPKIQ M LN S +L LP SVR N NLPLHFRRRFLHS    
Sbjct: 1   MAMKTTVSPLTDFQFNIHLPKIQPMSLNSSYALPLPFSVRCNQNLPLHFRRRFLHSSVIQ 60

Query: 288 RRRSLSSTCLVSDGTAFNVEAKVTVDDLSLEVKKKAMDVAPELKGTSIFLVGINSSIKSK 347
           RRRSL STC VSDGTA+NVEAK T DDLSLEVKKKAMDVAPELKGTSIFLVGINSS+K+K
Sbjct: 61  RRRSLPSTCFVSDGTAYNVEAKATTDDLSLEVKKKAMDVAPELKGTSIFLVGINSSLKTK 120

Query: 348 LGKLLADILRYYYFD----SDSLVVEASGGAAAAKLYKESDENGFRASETEVLKQLSSMG 407
           LGKLLAD+LRYYYFD    SD LVVEASGG AAAKLYKESDENGFRASETEVLKQLSSMG
Sbjct: 121 LGKLLADMLRYYYFDRYFLSDGLVVEASGGVAAAKLYKESDENGFRASETEVLKQLSSMG 180

Query: 408 RLVICAGNGAVQSSTNLALLRHGITLWVDLPLQMIAEELAEDRSELPVFDISTSGSYTEV 467
           RLV+CAGNGAV+SSTNLALLRHGITLW+D+PLQ+IAEE AEDR +LPVFDISTSGSY+EV
Sbjct: 181 RLVVCAGNGAVRSSTNLALLRHGITLWIDIPLQIIAEEFAEDRGQLPVFDISTSGSYSEV 240

Query: 468 LAQITSLYQEIKDGYATADASVSLQSM 488
           L QITSLYQEIK GYATADAS+SLQ +
Sbjct: 241 LGQITSLYQEIKVGYATADASISLQKL 267

[Close]

BLAST of Lcy09g020980 vs. ExPASy TrEMBL
Match: A0A6J1EPF2 (probable inactive shikimate kinase like 1, chloroplastic isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111435335 PE=3 SV=1)

HSP 1 Score: 420.2 bits (1079), Expect = 1.1e-113
Identity = 220/263 (83.65%), Postives = 236/263 (89.73%), Query Frame = 0


Query: 228 MAMKTSVSPLTDLQFNFHLPKIQAMFLNPSCSLSLPSSVRRNHNLPLHFRRRFLHS---Y 287
           MAMKT+VSPLTD  FN H PKIQ + LN S +L LP SVR N NLPLHFRRRFLHS    
Sbjct: 1   MAMKTTVSPLTDFHFNIHSPKIQPISLNSSYALPLPFSVRCNQNLPLHFRRRFLHSSAIQ 60

Query: 288 RRRSLSSTCLVSDGTAFNVEAKVTVDDLSLEVKKKAMDVAPELKGTSIFLVGINSSIKSK 347
           RRRSL STC VSDGTA+NVEAK T DDLSLEVKKKA DVAPELKGTSIFLVGINSS+K+K
Sbjct: 61  RRRSLPSTCFVSDGTAYNVEAKATTDDLSLEVKKKAKDVAPELKGTSIFLVGINSSLKTK 120

Query: 348 LGKLLADILRYYYFDSDSLVVEASGGAAAAKLYKESDENGFRASETEVLKQLSSMGRLVI 407
           LGKLLAD+LRYYYFDSDSLVVEASGG AAAKLYKESDENGFRASETEVLKQLSSMGRLV+
Sbjct: 121 LGKLLADMLRYYYFDSDSLVVEASGGVAAAKLYKESDENGFRASETEVLKQLSSMGRLVV 180

Query: 408 CAGNGAVQSSTNLALLRHGITLWVDLPLQMIAEELAEDRSELPVFDISTSGSYTEVLAQI 467
           CAGNGAV+SSTNLALLRHGITLW+D+PLQ+IAEE AEDR +LPVFDISTSGSY+EVL QI
Sbjct: 181 CAGNGAVRSSTNLALLRHGITLWIDIPLQIIAEEFAEDRGQLPVFDISTSGSYSEVLGQI 240

Query: 468 TSLYQEIKDGYATADASVSLQSM 488
           TSLYQEIK GYATADAS+SLQ +
Sbjct: 241 TSLYQEIKVGYATADASISLQKL 263

[Close]

BLAST of Lcy09g020980 vs. ExPASy TrEMBL
Match: A0A6J1EKB2 (probable inactive shikimate kinase like 1, chloroplastic isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111435335 PE=3 SV=1)

HSP 1 Score: 414.5 bits (1064), Expect = 6.3e-112
Identity = 220/267 (82.40%), Postives = 236/267 (88.39%), Query Frame = 0


Query: 228 MAMKTSVSPLTDLQFNFHLPKIQAMFLNPSCSLSLPSSVRRNHNLPLHFRRRFLHS---Y 287
           MAMKT+VSPLTD  FN H PKIQ + LN S +L LP SVR N NLPLHFRRRFLHS    
Sbjct: 1   MAMKTTVSPLTDFHFNIHSPKIQPISLNSSYALPLPFSVRCNQNLPLHFRRRFLHSSAIQ 60

Query: 288 RRRSLSSTCLVSDGTAFNVEAKVTVDDLSLEVKKKAMDVAPELKGTSIFLVGINSSIKSK 347
           RRRSL STC VSDGTA+NVEAK T DDLSLEVKKKA DVAPELKGTSIFLVGINSS+K+K
Sbjct: 61  RRRSLPSTCFVSDGTAYNVEAKATTDDLSLEVKKKAKDVAPELKGTSIFLVGINSSLKTK 120

Query: 348 LGKLLADILRYYYFD----SDSLVVEASGGAAAAKLYKESDENGFRASETEVLKQLSSMG 407
           LGKLLAD+LRYYYFD    SDSLVVEASGG AAAKLYKESDENGFRASETEVLKQLSSMG
Sbjct: 121 LGKLLADMLRYYYFDRYSLSDSLVVEASGGVAAAKLYKESDENGFRASETEVLKQLSSMG 180

Query: 408 RLVICAGNGAVQSSTNLALLRHGITLWVDLPLQMIAEELAEDRSELPVFDISTSGSYTEV 467
           RLV+CAGNGAV+SSTNLALLRHGITLW+D+PLQ+IAEE AEDR +LPVFDISTSGSY+EV
Sbjct: 181 RLVVCAGNGAVRSSTNLALLRHGITLWIDIPLQIIAEEFAEDRGQLPVFDISTSGSYSEV 240

Query: 468 LAQITSLYQEIKDGYATADASVSLQSM 488
           L QITSLYQEIK GYATADAS+SLQ +
Sbjct: 241 LGQITSLYQEIKVGYATADASISLQKL 267

[Close]

BLAST of Lcy09g020980 vs. NCBI nr
Match: XP_022989695.1 (probable inactive shikimate kinase like 1, chloroplastic isoform X2 [Cucurbita maxima])

HSP 1 Score: 426.8 bits (1096), Expect = 2.5e-115
Identity = 223/263 (84.79%), Postives = 238/263 (90.49%), Query Frame = 0


Query: 228 MAMKTSVSPLTDLQFNFHLPKIQAMFLNPSCSLSLPSSVRRNHNLPLHFRRRFLHS---Y 287
           MAMKT+VSPLTD QFN HLPKIQ M LN S +L LP SVR N NLPLHFRRRFLHS    
Sbjct: 1   MAMKTTVSPLTDFQFNIHLPKIQPMSLNSSYALPLPFSVRCNQNLPLHFRRRFLHSSVIQ 60

Query: 288 RRRSLSSTCLVSDGTAFNVEAKVTVDDLSLEVKKKAMDVAPELKGTSIFLVGINSSIKSK 347
           RRRSL STC VSDGTA+NVEAK T DDLSLEVKKKAMDVAPELKGTSIFLVGINSS+K+K
Sbjct: 61  RRRSLPSTCFVSDGTAYNVEAKATTDDLSLEVKKKAMDVAPELKGTSIFLVGINSSLKTK 120

Query: 348 LGKLLADILRYYYFDSDSLVVEASGGAAAAKLYKESDENGFRASETEVLKQLSSMGRLVI 407
           LGKLLAD+LRYYYFDSD LVVEASGG AAAKLYKESDENGFRASETEVLKQLSSMGRLV+
Sbjct: 121 LGKLLADMLRYYYFDSDGLVVEASGGVAAAKLYKESDENGFRASETEVLKQLSSMGRLVV 180

Query: 408 CAGNGAVQSSTNLALLRHGITLWVDLPLQMIAEELAEDRSELPVFDISTSGSYTEVLAQI 467
           CAGNGAV+SSTNLALLRHGITLW+D+PLQ+IAEE AEDR +LPVFDISTSGSY+EVL QI
Sbjct: 181 CAGNGAVRSSTNLALLRHGITLWIDIPLQIIAEEFAEDRGQLPVFDISTSGSYSEVLGQI 240

Query: 468 TSLYQEIKDGYATADASVSLQSM 488
           TSLYQEIK GYATADAS+SLQ +
Sbjct: 241 TSLYQEIKVGYATADASISLQKL 263

[Close]

BLAST of Lcy09g020980 vs. NCBI nr
Match: XP_038877384.1 (probable inactive shikimate kinase like 1, chloroplastic [Benincasa hispida])

HSP 1 Score: 425.2 bits (1092), Expect = 7.4e-115
Identity = 225/273 (82.42%), Postives = 245/273 (89.74%), Query Frame = 0


Query: 218 DTFPVLRELLMAMKTSVSPLTDLQFNFHLPKIQAMFLNPSCSLSLPSSVRRNHNLPLHFR 277
           + F V RELLMAMKT+VS LTDLQFN +LPK +AM LN S SLSLP S+ RNH+ PLH  
Sbjct: 16  EAFSVRRELLMAMKTTVSSLTDLQFNIYLPKFEAMALNSSFSLSLPPSLCRNHSFPLHIC 75

Query: 278 RRFLHS---YRRRSLSSTCLVSDGTAFNVEAKVTVDDLSLEVKKKAMDVAPELKGTSIFL 337
             F+ S    RRRSL STCLVSDGTAFNVEAKVTVDDL LEVKKKAMDVAPELKGTSIFL
Sbjct: 76  PPFMQSSAIRRRRSLPSTCLVSDGTAFNVEAKVTVDDLPLEVKKKAMDVAPELKGTSIFL 135

Query: 338 VGINSSIKSKLGKLLADILRYYYFDSDSLVVEASGGAAAAKLYKESDENGFRASETEVLK 397
           VGINSSIK+KLGK LAD+LRYYYFDSDSLVVEASGG AAAKLYK++DENGF+ASE+EVLK
Sbjct: 136 VGINSSIKTKLGKFLADLLRYYYFDSDSLVVEASGGEAAAKLYKQNDENGFQASESEVLK 195

Query: 398 QLSSMGRLVICAGNGAVQSSTNLALLRHGITLWVDLPLQMIAEELAEDRSELPVFDISTS 457
           QLSSMGRLV+CAGNGAVQSSTNLALLRHGITLW+DLPLQMIAEE AEDRS+ PVFDISTS
Sbjct: 196 QLSSMGRLVVCAGNGAVQSSTNLALLRHGITLWIDLPLQMIAEEFAEDRSQHPVFDISTS 255

Query: 458 GSYTEVLAQITSLYQEIKDGYATADASVSLQSM 488
           GSY+EVLAQITSLYQ+IKDGYATADAS+SLQ +
Sbjct: 256 GSYSEVLAQITSLYQKIKDGYATADASISLQKL 288

[Close]

BLAST of Lcy09g020980 vs. NCBI nr
Match: KAA0060353.1 (putative inactive shikimate kinase like 1 [Cucumis melo var. makuwa] >TYK22102.1 putative inactive shikimate kinase like 1 [Cucumis melo var. makuwa])

HSP 1 Score: 423.7 bits (1088), Expect = 2.1e-114
Identity = 224/275 (81.45%), Postives = 246/275 (89.45%), Query Frame = 0


Query: 218 DTFPVLRELLMAM--KTSVSPLTDLQFNFHLPKIQAMFLNPSCSLSLPSSVRRNHNLPLH 277
           + FPV RELLMAM  KT+VSPLTDLQFN HLPK +AM LN S SLSLPSS+RRNH+LPLH
Sbjct: 78  EEFPVQRELLMAMNLKTTVSPLTDLQFNIHLPKFEAMALNSSFSLSLPSSLRRNHSLPLH 137

Query: 278 FRRRFLHS---YRRRSLSSTCLVSDGTAFNVEAKVTVDDLSLEVKKKAMDVAPELKGTSI 337
               F+ S    RRRSL S+CLVSDGT+ NVEAKVTVDDLSLEVKKKAMDV PELKGTSI
Sbjct: 138 ICPPFIQSSAIRRRRSLPSSCLVSDGTSLNVEAKVTVDDLSLEVKKKAMDVGPELKGTSI 197

Query: 338 FLVGINSSIKSKLGKLLADILRYYYFDSDSLVVEASGGAAAAKLYKESDENGFRASETEV 397
           FLVGINSSIK+ LGKLLAD+LRYYYFDSDSLVVEASGG AAAKLYK+SDE GF+ASETEV
Sbjct: 198 FLVGINSSIKTNLGKLLADVLRYYYFDSDSLVVEASGGEAAAKLYKQSDEKGFQASETEV 257

Query: 398 LKQLSSMGRLVICAGNGAVQSSTNLALLRHGITLWVDLPLQMIAEELAEDRSELPVFDIS 457
           LKQLSSMGRLV+CAG+GAVQSSTNLALLRHGITLW+DLPLQMIAEE AEDRS+ PVFDIS
Sbjct: 258 LKQLSSMGRLVVCAGSGAVQSSTNLALLRHGITLWIDLPLQMIAEEFAEDRSQHPVFDIS 317

Query: 458 TSGSYTEVLAQITSLYQEIKDGYATADASVSLQSM 488
           TSGSY+EVL QITS+YQ++KDGYATADA +SLQ +
Sbjct: 318 TSGSYSEVLGQITSIYQKVKDGYATADALISLQKL 352

[Close]

BLAST of Lcy09g020980 vs. NCBI nr
Match: XP_022989694.1 (probable inactive shikimate kinase like 1, chloroplastic isoform X1 [Cucurbita maxima])

HSP 1 Score: 421.0 bits (1081), Expect = 1.4e-113
Identity = 223/267 (83.52%), Postives = 238/267 (89.14%), Query Frame = 0


Query: 228 MAMKTSVSPLTDLQFNFHLPKIQAMFLNPSCSLSLPSSVRRNHNLPLHFRRRFLHS---Y 287
           MAMKT+VSPLTD QFN HLPKIQ M LN S +L LP SVR N NLPLHFRRRFLHS    
Sbjct: 1   MAMKTTVSPLTDFQFNIHLPKIQPMSLNSSYALPLPFSVRCNQNLPLHFRRRFLHSSVIQ 60

Query: 288 RRRSLSSTCLVSDGTAFNVEAKVTVDDLSLEVKKKAMDVAPELKGTSIFLVGINSSIKSK 347
           RRRSL STC VSDGTA+NVEAK T DDLSLEVKKKAMDVAPELKGTSIFLVGINSS+K+K
Sbjct: 61  RRRSLPSTCFVSDGTAYNVEAKATTDDLSLEVKKKAMDVAPELKGTSIFLVGINSSLKTK 120

Query: 348 LGKLLADILRYYYFD----SDSLVVEASGGAAAAKLYKESDENGFRASETEVLKQLSSMG 407
           LGKLLAD+LRYYYFD    SD LVVEASGG AAAKLYKESDENGFRASETEVLKQLSSMG
Sbjct: 121 LGKLLADMLRYYYFDRYFLSDGLVVEASGGVAAAKLYKESDENGFRASETEVLKQLSSMG 180

Query: 408 RLVICAGNGAVQSSTNLALLRHGITLWVDLPLQMIAEELAEDRSELPVFDISTSGSYTEV 467
           RLV+CAGNGAV+SSTNLALLRHGITLW+D+PLQ+IAEE AEDR +LPVFDISTSGSY+EV
Sbjct: 181 RLVVCAGNGAVRSSTNLALLRHGITLWIDIPLQIIAEEFAEDRGQLPVFDISTSGSYSEV 240

Query: 468 LAQITSLYQEIKDGYATADASVSLQSM 488
           L QITSLYQEIK GYATADAS+SLQ +
Sbjct: 241 LGQITSLYQEIKVGYATADASISLQKL 267

[Close]

BLAST of Lcy09g020980 vs. NCBI nr
Match: XP_022928568.1 (probable inactive shikimate kinase like 1, chloroplastic isoform X2 [Cucurbita moschata])

HSP 1 Score: 420.2 bits (1079), Expect = 2.4e-113
Identity = 220/263 (83.65%), Postives = 236/263 (89.73%), Query Frame = 0


Query: 228 MAMKTSVSPLTDLQFNFHLPKIQAMFLNPSCSLSLPSSVRRNHNLPLHFRRRFLHS---Y 287
           MAMKT+VSPLTD  FN H PKIQ + LN S +L LP SVR N NLPLHFRRRFLHS    
Sbjct: 1   MAMKTTVSPLTDFHFNIHSPKIQPISLNSSYALPLPFSVRCNQNLPLHFRRRFLHSSAIQ 60

Query: 288 RRRSLSSTCLVSDGTAFNVEAKVTVDDLSLEVKKKAMDVAPELKGTSIFLVGINSSIKSK 347
           RRRSL STC VSDGTA+NVEAK T DDLSLEVKKKA DVAPELKGTSIFLVGINSS+K+K
Sbjct: 61  RRRSLPSTCFVSDGTAYNVEAKATTDDLSLEVKKKAKDVAPELKGTSIFLVGINSSLKTK 120

Query: 348 LGKLLADILRYYYFDSDSLVVEASGGAAAAKLYKESDENGFRASETEVLKQLSSMGRLVI 407
           LGKLLAD+LRYYYFDSDSLVVEASGG AAAKLYKESDENGFRASETEVLKQLSSMGRLV+
Sbjct: 121 LGKLLADMLRYYYFDSDSLVVEASGGVAAAKLYKESDENGFRASETEVLKQLSSMGRLVV 180

Query: 408 CAGNGAVQSSTNLALLRHGITLWVDLPLQMIAEELAEDRSELPVFDISTSGSYTEVLAQI 467
           CAGNGAV+SSTNLALLRHGITLW+D+PLQ+IAEE AEDR +LPVFDISTSGSY+EVL QI
Sbjct: 181 CAGNGAVRSSTNLALLRHGITLWIDIPLQIIAEEFAEDRGQLPVFDISTSGSYSEVLGQI 240

Query: 468 TSLYQEIKDGYATADASVSLQSM 488
           TSLYQEIK GYATADAS+SLQ +
Sbjct: 241 TSLYQEIKVGYATADASISLQKL 263

[Close]

BLAST of Lcy09g020980 vs. TAIR 10
Match: AT3G26900.1 (shikimate kinase like 1 )

HSP 1 Score: 189.1 bits (479), Expect = 8.3e-48
Identity = 99/172 (57.56%), Postives = 129/172 (75.00%), Query Frame = 0


Query: 316 VKKKAMDVAPELKGTSIFLVGINSSIKSKLGKLLADILRYYYFDSDSLVVEASGGAAAAK 375
           VK+KAMD+APELKG SIFLVGIN+SIK+  GKLLA+ LRYYYFDSD+L+ EA+GG  +A+
Sbjct: 76  VKRKAMDIAPELKGASIFLVGINNSIKTNTGKLLAEALRYYYFDSDNLITEAAGGNVSAQ 135

Query: 376 LYKESDENGFRASETEVLKQLSSMGRLVICAGNGAVQSSTNLALLRHGITLWVDLPLQMI 435
             KE+DE  F+ SETEVLKQLSSMGRLV+CAG+GAVQS  NLALLRHGI++W+D+PL + 
Sbjct: 136 ALKEADEKAFQESETEVLKQLSSMGRLVVCAGDGAVQSLRNLALLRHGISIWIDVPLDIT 195

Query: 436 AEELAEDRSELPVFDISTSGSYTEVLAQITSLYQEIKDGYATADASVSLQSM 488
           A+   +D       D   S    E+   + + Y++ + GY TAD S+SL+ +
Sbjct: 196 AK--GDD-------DSFHSEPSPELFDTLKASYEKSRKGYETADVSISLEKI 238

[Close]

BLAST of Lcy09g020980 vs. TAIR 10
Match: AT3G26900.2 (shikimate kinase like 1 )

HSP 1 Score: 189.1 bits (479), Expect = 8.3e-48
Identity = 99/172 (57.56%), Postives = 129/172 (75.00%), Query Frame = 0


Query: 316 VKKKAMDVAPELKGTSIFLVGINSSIKSKLGKLLADILRYYYFDSDSLVVEASGGAAAAK 375
           VK+KAMD+APELKG SIFLVGIN+SIK+  GKLLA+ LRYYYFDSD+L+ EA+GG  +A+
Sbjct: 76  VKRKAMDIAPELKGASIFLVGINNSIKTNTGKLLAEALRYYYFDSDNLITEAAGGNVSAQ 135

Query: 376 LYKESDENGFRASETEVLKQLSSMGRLVICAGNGAVQSSTNLALLRHGITLWVDLPLQMI 435
             KE+DE  F+ SETEVLKQLSSMGRLV+CAG+GAVQS  NLALLRHGI++W+D+PL + 
Sbjct: 136 ALKEADEKAFQESETEVLKQLSSMGRLVVCAGDGAVQSLRNLALLRHGISIWIDVPLDIT 195

Query: 436 AEELAEDRSELPVFDISTSGSYTEVLAQITSLYQEIKDGYATADASVSLQSM 488
           A+   +D       D   S    E+   + + Y++ + GY TAD S+SL+ +
Sbjct: 196 AK--GDD-------DSFHSEPSPELFDTLKASYEKSRKGYETADVSISLEKI 238

[Close]

BLAST of Lcy09g020980 vs. TAIR 10
Match: AT3G26900.3 (shikimate kinase like 1 )

HSP 1 Score: 189.1 bits (479), Expect = 8.3e-48
Identity = 99/172 (57.56%), Postives = 129/172 (75.00%), Query Frame = 0


Query: 316 VKKKAMDVAPELKGTSIFLVGINSSIKSKLGKLLADILRYYYFDSDSLVVEASGGAAAAK 375
           VK+KAMD+APELKG SIFLVGIN+SIK+  GKLLA+ LRYYYFDSD+L+ EA+GG  +A+
Sbjct: 76  VKRKAMDIAPELKGASIFLVGINNSIKTNTGKLLAEALRYYYFDSDNLITEAAGGNVSAQ 135

Query: 376 LYKESDENGFRASETEVLKQLSSMGRLVICAGNGAVQSSTNLALLRHGITLWVDLPLQMI 435
             KE+DE  F+ SETEVLKQLSSMGRLV+CAG+GAVQS  NLALLRHGI++W+D+PL + 
Sbjct: 136 ALKEADEKAFQESETEVLKQLSSMGRLVVCAGDGAVQSLRNLALLRHGISIWIDVPLDIT 195

Query: 436 AEELAEDRSELPVFDISTSGSYTEVLAQITSLYQEIKDGYATADASVSLQSM 488
           A+   +D       D   S    E+   + + Y++ + GY TAD S+SL+ +
Sbjct: 196 AK--GDD-------DSFHSEPSPELFDTLKASYEKSRKGYETADVSISLEKI 238

[Close]

BLAST of Lcy09g020980 vs. TAIR 10
Match: AT2G21940.3 (shikimate kinase 1 )

HSP 1 Score: 118.6 bits (296), Expect = 1.4e-26
Identity = 67/205 (32.68%), Postives = 119/205 (58.05%), Query Frame = 0


Query: 285 RRRSLSSTCLVSDGTAFNVEAKVTVDDLSLEV-KKKAMDVAPELKGTSIFLVGINSSIKS 344
           +RR++S     SD  +  +    +V     ++ K+KA +V P L G S++LVG+  S K+
Sbjct: 57  QRRAVSPAVSCSDNNSSALLETGSVYPFDEDILKRKAEEVKPYLNGRSMYLVGMMGSGKT 116

Query: 345 KLGKLLADILRYYYFDSDSLVVEASGGAAAAKLYKESDENGFRASETEVLKQLSSMGRLV 404
            +GKL++ +L Y +FD D+L+ +A  G + A+++    EN FR  ET+ LK+LSS  ++V
Sbjct: 117 TVGKLMSKVLGYTFFDCDTLIEQAMNGTSVAEIFVHHGENFFRGKETDALKKLSSRYQVV 176

Query: 405 ICAGNGAVQSSTNLALLRHGITLWVDLPLQMIAEELAE-DRSELPVFDISTSGSYTEVLA 464
           +  G GAV    N   +  GI++W+D+PL+ +A  +A       P+    +  +Y+    
Sbjct: 177 VSTGGGAVIRPINWKYMHKGISIWLDVPLEALAHRIAAVGTDSRPLLHDESGDAYSVAFK 236

Query: 465 QITSLYQEIKDGYATADASVSLQSM 488
           ++++++ E  + Y  A+A VSL+SM
Sbjct: 237 RLSAIWDERGEAYTNANARVSLESM 261

[Close]

BLAST of Lcy09g020980 vs. TAIR 10
Match: AT2G21940.4 (shikimate kinase 1 )

HSP 1 Score: 116.7 bits (291), Expect = 5.2e-26
Identity = 63/199 (31.66%), Postives = 115/199 (57.79%), Query Frame = 0


Query: 290 SSTCLVSDGTAFNVEAKVTVDDLSLEVKKKAMDVAPELKGTSIFLVGINSSIKSKLGKLL 349
           SS  L+  G+ +  +  +        +K+KA +V P L G S++LVG+  S K+ +GKL+
Sbjct: 72  SSGALLETGSVYPFDEDI--------LKRKAEEVKPYLNGRSMYLVGMMGSGKTTVGKLM 131

Query: 350 ADILRYYYFDSDSLVVEASGGAAAAKLYKESDENGFRASETEVLKQLSSMGRLVICAGNG 409
           + +L Y +FD D+L+ +A  G + A+++    EN FR  ET+ LK+LSS  ++V+  G G
Sbjct: 132 SKVLGYTFFDCDTLIEQAMNGTSVAEIFVHHGENFFRGKETDALKKLSSRYQVVVSTGGG 191

Query: 410 AVQSSTNLALLRHGITLWVDLPLQMIAEELAE-DRSELPVFDISTSGSYTEVLAQITSLY 469
           AV    N   +  GI++W+D+PL+ +A  +A       P+    +  +Y+    ++++++
Sbjct: 192 AVIRPINWKYMHKGISIWLDVPLEALAHRIAAVGTDSRPLLHDESGDAYSVAFKRLSAIW 251

Query: 470 QEIKDGYATADASVSLQSM 488
            E  + Y  A+A VSL+++
Sbjct: 252 DERGEAYTNANARVSLENI 262

The following BLAST results are available for this feature:

BLAST of Lcy09g020980 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LW20	1.2e-46	57.56	Probable inactive shikimate kinase like 1, chloroplastic OS=Arabidopsis thaliana...	[more]
Q7X7H9	6.4e-29	40.34	Shikimate kinase 3, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=SK...	[more]
Q5NTH3	4.2e-28	39.33	Shikimate kinase 2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=SK...	[more]
Q5NTH4	3.0e-26	37.08	Shikimate kinase 1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=SK...	[more]
Q00497	9.6e-25	33.64	Shikimate kinase, chloroplastic OS=Solanum lycopersicum OX=4081 GN=SK PE=1 SV=1	[more]

BLAST of Lcy09g020980 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JN35	1.2e-115	84.79	probable inactive shikimate kinase like 1, chloroplastic isoform X2 OS=Cucurbita...	[more]
A0A5D3DET0	1.0e-114	81.45	Putative inactive shikimate kinase like 1 OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A6J1JQ24	6.7e-114	83.52	probable inactive shikimate kinase like 1, chloroplastic isoform X1 OS=Cucurbita...	[more]
A0A6J1EPF2	1.1e-113	83.65	probable inactive shikimate kinase like 1, chloroplastic isoform X2 OS=Cucurbita...	[more]
A0A6J1EKB2	6.3e-112	82.40	probable inactive shikimate kinase like 1, chloroplastic isoform X1 OS=Cucurbita...	[more]

BLAST of Lcy09g020980 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022989695.1	2.5e-115	84.79	probable inactive shikimate kinase like 1, chloroplastic isoform X2 [Cucurbita m...	[more]
XP_038877384.1	7.4e-115	82.42	probable inactive shikimate kinase like 1, chloroplastic [Benincasa hispida]	[more]
KAA0060353.1	2.1e-114	81.45	putative inactive shikimate kinase like 1 [Cucumis melo var. makuwa] >TYK22102.1...	[more]
XP_022989694.1	1.4e-113	83.52	probable inactive shikimate kinase like 1, chloroplastic isoform X1 [Cucurbita m...	[more]
XP_022928568.1	2.4e-113	83.65	probable inactive shikimate kinase like 1, chloroplastic isoform X2 [Cucurbita m...	[more]

BLAST of Lcy09g020980 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G26900.1	8.3e-48	57.56	shikimate kinase like 1	[more]
AT3G26900.2	8.3e-48	57.56	shikimate kinase like 1	[more]
AT3G26900.3	8.3e-48	57.56	shikimate kinase like 1	[more]
AT2G21940.3	1.4e-26	32.68	shikimate kinase 1	[more]
AT2G21940.4	5.2e-26	31.66	shikimate kinase 1	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR01100	SHIKIMTKNASE	coord: 356..369 score: 28.02 coord: 332..347 score: 38.46 coord: 423..440 score: 18.38 coord: 403..412 score: 42.31 coord: 385..393 score: 53.85
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 84..103
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..48
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..121
None	No IPR available	PANTHER	PTHR21087:SF4	INACTIVE SHIKIMATE KINASE LIKE 1, CHLOROPLASTIC-RELATED	coord: 246..486
None	No IPR available	PANTHER	PTHR21087	SHIKIMATE KINASE	coord: 246..486
IPR031322	Shikimate kinase/gluconokinase	PFAM	PF01202	SKI	coord: 340..480 e-value: 3.9E-25 score: 88.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 314..487 e-value: 1.4E-40 score: 141.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 328..471
IPR000623	Shikimate kinase/Threonine synthase-like 1	HAMAP	MF_00109	Shikimate_kinase	coord: 329..487 score: 15.899083

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy09g020980.1	Lcy09g020980.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009658	chloroplast organization
biological_process	GO:0016310	phosphorylation
biological_process	GO:0010027	thylakoid membrane organization
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0016301	kinase activity