Lcy09g020410 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy09g020410
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	GBBH-like_N domain-containing protein
Location	Chr09: 45739302 .. 45741320 (-)
RNA-Seq Expression	Lcy09g020410
Synteny	Lcy09g020410

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTAGCTTTGCATAAAGCTTTCCGGACGATCCATACCACCGTCGATGCTCCTCAAATTACCAGTTTCGCTCTTCGCGTCCCCAAATATGTAAGTCTTTCCTCCCCAAATCTTCGTTTAATTTTCCATCTGATTTCATTTCTGCTTCAGCATGCTCGTTATATCGATCTGTTCTTGACTTTTGATTTCTGGGTTTTGTGTATATATTCGTTTGAGTGATTATAGAATGGTGAATCAGGACTGCCCATTTCATTTCGTCCTTGTGGAATCTTTTGTGGTTTTGGAAGCAGAATCTGTGACAAAAATCACATTGGAAAGCGCCATCATGTTAACGGAAGGGAAATGATAACTAACTAGTGTTCTTCTTAGCAAGTCATTATCCTAATAAGTTGATTTAACAGAAAATTGATTGCTCGATATCTCTCTCTGGAAAATGGGTTATGAATTTAGGATGCCCCCATTTTCATTAAGAAAGCAGTGCCACAGATTTCATTAAGTTTCAACCTCTGTTGGTGACGTGCAATTTTTCTTCATAATTTCAGTGGATGTGATAATTGATAAAGGCTTTGTGGCTAATTTCACGGCAATTTCAGTGATTGAGATTGGATGCATACTGGATTACTTCTTGGAGACTTTGAAATCTTGAAAAGTTTGTCAGTCATAAATTTGGTTGAAAATGGATAATACATTATATTTTTATAGCTTTGGTACTTTTCAGTTATTTAAACTTGGGTGGATATGTTGTACAACATTCTTTCATCACAACTTCGTTAGGAGCATAACTTACTTTAGAAGTTGATTTTGCTAAATGTTGTGATGTGCTATTTGTTTTCAGTTTGTGAATATGTTTTTTTTTTTTTTTTTTTCACATACACTGTTTACTATGATGCAGTTCACTAAATGTTTCATTTTAGGTAGAGGTGAAATTTGCAGATGGAAGTGTGTTCAACTTGTCAGCTGAATTCTTGAGAATATATAGTCCAGCTGTTGATGCTAAGGTCCGATCAATTGGAGGTGAAAAGGTACTGTAGAAACAACTTTTAGTTTCATTTATCTTTCTATCTGAAATTGTGCTAATTCATCATAGGCTGGTCAAACAGGAAAATCGATAGTCCACGTAACAGTAATTATCACCTGCCTAGGATATAAAGATTGAGTTTGGAATGGTTTTTAAGAGTAGTGCTTTTAAATAAAACACTTCCTTTTAATATTTGTGACTTGCCTTTCGACTTTGATTAATCTTATAAGACAACTATTACAACATTTGATTGCCAAGGAAACTAAATAAGTGGCTACCATGATTTGCTTTGAATTATCTCTAAGCCCTTTACATTTTTCATTGGTCTTGATGATCACTAGGCTAACCCATGAAACAGTTCTTTTATAAATACTTTTGGAAAAAACATCCACTTTTCACCAGTCCAAAAATCATACCATACTCACCCTGTACATCCTACAAACTAGCCTTTATAGAGATATCATTAGCCATGTTCTAGAATTACATGTATGGAGTATAATATAAGGGGTGTGCAATGGTTGGCCTTGGCCAAACTGCTCACTTAATACAATTTTATGTTTAGACATATTCTCATGATCTGATGCTTCTGCTGATTTATTAATATCCAGAATATGGGGTGCTTTGTTTATCAGATTCAATCATTAAATGCATGATTTTGAAGTAGGTAATTTCTGGACGGCGTTATGTTGGTATCATGTCTGCAGAACCAGTTGGGAACTATGGGGTAAGGTACTTCGAAATTACTGGTTAATATGAGTGTTTCTGAATTCCAATGAATCTTTCTATATTGAGTTGGTAGAATCTGCACGTACTGTTTTGGTCCTTGAAATTTGATGTTGCTGCAATTTGCTAGGATACTTTTTGATGACTTGCATAAAACTGGGATTTATTCATGGGATTATTTCTACCATCTTGGGAGCAACAAATTTACGCTCTTGAGAAATTATGTTAAAACACTGAAGAAGCACGGGCTGAGCCGAGATCCACCAAGGAGAAAATGA

mRNA sequence

ATGTTAGCTTTGCATAAAGCTTTCCGGACGATCCATACCACCGTCGATGCTCCTCAAATTACCAGTTTCGCTCTTCGCGTCCCCAAATATGTAGAGGTGAAATTTGCAGATGGAAGTGTGTTCAACTTGTCAGCTGAATTCTTGAGAATATATAGTCCAGCTGTTGATGCTAAGGTCCGATCAATTGGAGGTGAAAAGGTAATTTCTGGACGGCGTTATGTTGGTATCATGTCTGCAGAACCAGTTGGGAACTATGGGGTAAGGATACTTTTTGATGACTTGCATAAAACTGGGATTTATTCATGGGATTATTTCTACCATCTTGGGAGCAACAAATTTACGCTCTTGAGAAATTATGTTAAAACACTGAAGAAGCACGGGCTGAGCCGAGATCCACCAAGGAGAAAATGA

Coding sequence (CDS)

ATGTTAGCTTTGCATAAAGCTTTCCGGACGATCCATACCACCGTCGATGCTCCTCAAATTACCAGTTTCGCTCTTCGCGTCCCCAAATATGTAGAGGTGAAATTTGCAGATGGAAGTGTGTTCAACTTGTCAGCTGAATTCTTGAGAATATATAGTCCAGCTGTTGATGCTAAGGTCCGATCAATTGGAGGTGAAAAGGTAATTTCTGGACGGCGTTATGTTGGTATCATGTCTGCAGAACCAGTTGGGAACTATGGGGTAAGGATACTTTTTGATGACTTGCATAAAACTGGGATTTATTCATGGGATTATTTCTACCATCTTGGGAGCAACAAATTTACGCTCTTGAGAAATTATGTTAAAACACTGAAGAAGCACGGGCTGAGCCGAGATCCACCAAGGAGAAAATGA

Protein sequence

MLALHKAFRTIHTTVDAPQITSFALRVPKYVEVKFADGSVFNLSAEFLRIYSPAVDAKVRSIGGEKVISGRRYVGIMSAEPVGNYGVRILFDDLHKTGIYSWDYFYHLGSNKFTLLRNYVKTLKKHGLSRDPPRRK

Homology

[Close]

BLAST of Lcy09g020410 vs. ExPASy TrEMBL
Match: A0A6J1J9C4 (uncharacterized protein LOC111482460 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482460 PE=4 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 1.3e-67
Identity = 127/136 (93.38%), Postives = 133/136 (97.79%), Query Frame = 0


Query: 1   MLALHKAFRTIHTTVDAPQITSFALRVPKYVEVKFADGSVFNLSAEFLRIYSPAVDAKVR 60
           MLALH+AFRTIHTTVD+PQITSFALR PKYVEVKFADGSVFNLSAEFLR+YSPA DAKVR
Sbjct: 1   MLALHRAFRTIHTTVDSPQITSFALRAPKYVEVKFADGSVFNLSAEFLRVYSPAADAKVR 60

Query: 61  SIGGEKVISGRRYVGIMSAEPVGNYGVRILFDDLHKTGIYSWDYFYHLGSNKFTLLRNYV 120
           SIGGEKVISGRR+VGIMSAEPVGNYGVRILFDDLH+TGIYSWDYFYHLGSNKFT LRNYV
Sbjct: 61  SIGGEKVISGRRHVGIMSAEPVGNYGVRILFDDLHRTGIYSWDYFYHLGSNKFTFLRNYV 120

Query: 121 KTLKKHGLSRDPPRRK 137
           KTLKKHGLSRDPP+RK
Sbjct: 121 KTLKKHGLSRDPPKRK 136

[Close]

BLAST of Lcy09g020410 vs. ExPASy TrEMBL
Match: A0A6J1F9C8 (uncharacterized protein LOC111442002 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111442002 PE=4 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 6.5e-67
Identity = 126/136 (92.65%), Postives = 132/136 (97.06%), Query Frame = 0


Query: 1   MLALHKAFRTIHTTVDAPQITSFALRVPKYVEVKFADGSVFNLSAEFLRIYSPAVDAKVR 60
           MLAL +AFRTIHTTVDAPQ+TSFALR PKYVEVKFADGSVFNLSAEFLR+YSPA DAKVR
Sbjct: 1   MLALQRAFRTIHTTVDAPQVTSFALRAPKYVEVKFADGSVFNLSAEFLRVYSPAADAKVR 60

Query: 61  SIGGEKVISGRRYVGIMSAEPVGNYGVRILFDDLHKTGIYSWDYFYHLGSNKFTLLRNYV 120
           SIGGEKVISGRR+VGIMSAEPVGNYGVRILFDDLH+TGIYSWDYFYHLGSNKFT LRNYV
Sbjct: 61  SIGGEKVISGRRHVGIMSAEPVGNYGVRILFDDLHRTGIYSWDYFYHLGSNKFTFLRNYV 120

Query: 121 KTLKKHGLSRDPPRRK 137
           KTLKKHGLSRDPP+RK
Sbjct: 121 KTLKKHGLSRDPPKRK 136

[Close]

BLAST of Lcy09g020410 vs. ExPASy TrEMBL
Match: A0A6J1DIS9 (uncharacterized protein LOC111021468 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111021468 PE=4 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 4.2e-66
Identity = 124/135 (91.85%), Postives = 134/135 (99.26%), Query Frame = 0


Query: 2   LALHKAFRTIHTTVDAPQITSFALRVPKYVEVKFADGSVFNLSAEFLRIYSPAVDAKVRS 61
           +ALH+AFRTIHTTV+AP++TSFALR PK+VEVKFADGS+FNLSAEFLRIYSPAVDAKVRS
Sbjct: 1   MALHRAFRTIHTTVEAPRLTSFALRAPKFVEVKFADGSLFNLSAEFLRIYSPAVDAKVRS 60

Query: 62  IGGEKVISGRRYVGIMSAEPVGNYGVRILFDDLHKTGIYSWDYFYHLGSNKFTLLRNYVK 121
           IGGEKVISGRR+VGIMSAEPVGNYGVRILFDDLHKTGIYSWDYFYHLGSNKFTLLRNYV+
Sbjct: 61  IGGEKVISGRRHVGIMSAEPVGNYGVRILFDDLHKTGIYSWDYFYHLGSNKFTLLRNYVR 120

Query: 122 TLKKHGLSRDPPRRK 137
           TL+KHGLSRDPPRRK
Sbjct: 121 TLQKHGLSRDPPRRK 135

[Close]

BLAST of Lcy09g020410 vs. ExPASy TrEMBL
Match: A0A1S3BNF3 (uncharacterized protein LOC103491759 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491759 PE=4 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 5.2e-64
Identity = 122/136 (89.71%), Postives = 130/136 (95.59%), Query Frame = 0


Query: 1   MLALHKAFRTIHTTVDAPQITSFALRVPKYVEVKFADGSVFNLSAEFLRIYSPAVDAKVR 60
           ML L++ FRTIHTT++APQIT+FAL  PKYVEVKFADGSVFNLSAEFLRIYSPA DAKVR
Sbjct: 23  MLPLNRLFRTIHTTLNAPQITTFALHAPKYVEVKFADGSVFNLSAEFLRIYSPAADAKVR 82

Query: 61  SIGGEKVISGRRYVGIMSAEPVGNYGVRILFDDLHKTGIYSWDYFYHLGSNKFTLLRNYV 120
           SIGGEKVI GRR+VGIMSAEPVGNYGVRILFDDLH+TGIYSWDYFYHLGSNKFTLLRNYV
Sbjct: 83  SIGGEKVIFGRRHVGIMSAEPVGNYGVRILFDDLHRTGIYSWDYFYHLGSNKFTLLRNYV 142

Query: 121 KTLKKHGLSRDPPRRK 137
           KTLKKHGLSRDPP+RK
Sbjct: 143 KTLKKHGLSRDPPKRK 158

[Close]

BLAST of Lcy09g020410 vs. ExPASy TrEMBL
Match: A0A4U5PZX0 (GBBH-like_N domain-containing protein OS=Populus alba OX=43335 GN=D5086_0000159830 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 1.1e-58
Identity = 108/136 (79.41%), Postives = 127/136 (93.38%), Query Frame = 0


Query: 1   MLALHKAFRTIHTTVDAPQITSFALRVPKYVEVKFADGSVFNLSAEFLRIYSPAVDAKVR 60
           MLA+ KA R +HT++DAP++T F L+ PKYVEV++A+GS FNLSAEFLRI+SPAVD KVR
Sbjct: 1   MLAIQKAIRRVHTSLDAPRLTRFTLQAPKYVEVEYANGSKFNLSAEFLRIHSPAVDGKVR 60

Query: 61  SIGGEKVISGRRYVGIMSAEPVGNYGVRILFDDLHKTGIYSWDYFYHLGSNKFTLLRNYV 120
           S+GGEKVI GRR+VGIMSAEPVGNYGVR++FDDLHKTGIY+WD+FYHLGSNKFTL+RNY+
Sbjct: 61  SVGGEKVIVGRRHVGIMSAEPVGNYGVRMIFDDLHKTGIYTWDFFYHLGSNKFTLMRNYI 120

Query: 121 KTLKKHGLSRDPPRRK 137
           KTLKKHGLSRDPPRRK
Sbjct: 121 KTLKKHGLSRDPPRRK 136

[Close]

BLAST of Lcy09g020410 vs. NCBI nr
Match: XP_022984013.1 (uncharacterized protein LOC111482460 isoform X1 [Cucurbita maxima])

HSP 1 Score: 265.4 bits (677), Expect = 2.7e-67
Identity = 127/136 (93.38%), Postives = 133/136 (97.79%), Query Frame = 0


Query: 1   MLALHKAFRTIHTTVDAPQITSFALRVPKYVEVKFADGSVFNLSAEFLRIYSPAVDAKVR 60
           MLALH+AFRTIHTTVD+PQITSFALR PKYVEVKFADGSVFNLSAEFLR+YSPA DAKVR
Sbjct: 1   MLALHRAFRTIHTTVDSPQITSFALRAPKYVEVKFADGSVFNLSAEFLRVYSPAADAKVR 60

Query: 61  SIGGEKVISGRRYVGIMSAEPVGNYGVRILFDDLHKTGIYSWDYFYHLGSNKFTLLRNYV 120
           SIGGEKVISGRR+VGIMSAEPVGNYGVRILFDDLH+TGIYSWDYFYHLGSNKFT LRNYV
Sbjct: 61  SIGGEKVISGRRHVGIMSAEPVGNYGVRILFDDLHRTGIYSWDYFYHLGSNKFTFLRNYV 120

Query: 121 KTLKKHGLSRDPPRRK 137
           KTLKKHGLSRDPP+RK
Sbjct: 121 KTLKKHGLSRDPPKRK 136

[Close]

BLAST of Lcy09g020410 vs. NCBI nr
Match: XP_022935010.1 (uncharacterized protein LOC111442002 isoform X1 [Cucurbita moschata])

HSP 1 Score: 263.1 bits (671), Expect = 1.4e-66
Identity = 126/136 (92.65%), Postives = 132/136 (97.06%), Query Frame = 0


Query: 1   MLALHKAFRTIHTTVDAPQITSFALRVPKYVEVKFADGSVFNLSAEFLRIYSPAVDAKVR 60
           MLAL +AFRTIHTTVDAPQ+TSFALR PKYVEVKFADGSVFNLSAEFLR+YSPA DAKVR
Sbjct: 1   MLALQRAFRTIHTTVDAPQVTSFALRAPKYVEVKFADGSVFNLSAEFLRVYSPAADAKVR 60

Query: 61  SIGGEKVISGRRYVGIMSAEPVGNYGVRILFDDLHKTGIYSWDYFYHLGSNKFTLLRNYV 120
           SIGGEKVISGRR+VGIMSAEPVGNYGVRILFDDLH+TGIYSWDYFYHLGSNKFT LRNYV
Sbjct: 61  SIGGEKVISGRRHVGIMSAEPVGNYGVRILFDDLHRTGIYSWDYFYHLGSNKFTFLRNYV 120

Query: 121 KTLKKHGLSRDPPRRK 137
           KTLKKHGLSRDPP+RK
Sbjct: 121 KTLKKHGLSRDPPKRK 136

[Close]

BLAST of Lcy09g020410 vs. NCBI nr
Match: XP_022154140.1 (uncharacterized protein LOC111021468 isoform X1 [Momordica charantia])

HSP 1 Score: 260.4 bits (664), Expect = 8.8e-66
Identity = 124/135 (91.85%), Postives = 134/135 (99.26%), Query Frame = 0


Query: 2   LALHKAFRTIHTTVDAPQITSFALRVPKYVEVKFADGSVFNLSAEFLRIYSPAVDAKVRS 61
           +ALH+AFRTIHTTV+AP++TSFALR PK+VEVKFADGS+FNLSAEFLRIYSPAVDAKVRS
Sbjct: 1   MALHRAFRTIHTTVEAPRLTSFALRAPKFVEVKFADGSLFNLSAEFLRIYSPAVDAKVRS 60

Query: 62  IGGEKVISGRRYVGIMSAEPVGNYGVRILFDDLHKTGIYSWDYFYHLGSNKFTLLRNYVK 121
           IGGEKVISGRR+VGIMSAEPVGNYGVRILFDDLHKTGIYSWDYFYHLGSNKFTLLRNYV+
Sbjct: 61  IGGEKVISGRRHVGIMSAEPVGNYGVRILFDDLHKTGIYSWDYFYHLGSNKFTLLRNYVR 120

Query: 122 TLKKHGLSRDPPRRK 137
           TL+KHGLSRDPPRRK
Sbjct: 121 TLQKHGLSRDPPRRK 135

[Close]

BLAST of Lcy09g020410 vs. NCBI nr
Match: KAG7017806.1 (hypothetical protein SDJN02_19672 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 260.0 bits (663), Expect = 1.1e-65
Identity = 126/136 (92.65%), Postives = 131/136 (96.32%), Query Frame = 0


Query: 1   MLALHKAFRTIHTTVDAPQITSFALRVPKYVEVKFADGSVFNLSAEFLRIYSPAVDAKVR 60
           MLAL +AFRTIHTTVDAPQITSFALR PK VEVKFADGSVFNLSAEFLR+YSPA DAKVR
Sbjct: 1   MLALQRAFRTIHTTVDAPQITSFALRAPKCVEVKFADGSVFNLSAEFLRVYSPAADAKVR 60

Query: 61  SIGGEKVISGRRYVGIMSAEPVGNYGVRILFDDLHKTGIYSWDYFYHLGSNKFTLLRNYV 120
           SIGGEKVISGRR+VGIMSAEPVGNYGVRILFDDLH+TGIYSWDYFYHLGSNKFT LRNYV
Sbjct: 61  SIGGEKVISGRRHVGIMSAEPVGNYGVRILFDDLHRTGIYSWDYFYHLGSNKFTFLRNYV 120

Query: 121 KTLKKHGLSRDPPRRK 137
           KTLKKHGLSRDPP+RK
Sbjct: 121 KTLKKHGLSRDPPKRK 136

[Close]

BLAST of Lcy09g020410 vs. NCBI nr
Match: XP_031737737.1 (uncharacterized protein LOC101219823 isoform X1 [Cucumis sativus])

HSP 1 Score: 258.1 bits (658), Expect = 4.4e-65
Identity = 122/136 (89.71%), Postives = 131/136 (96.32%), Query Frame = 0


Query: 1   MLALHKAFRTIHTTVDAPQITSFALRVPKYVEVKFADGSVFNLSAEFLRIYSPAVDAKVR 60
           ML LH+ FRTIHTT+DAPQIT+FAL  PKYVEVKFADGSVFNLSAEFLR+YSPA DAK+R
Sbjct: 68  MLPLHRLFRTIHTTLDAPQITTFALHAPKYVEVKFADGSVFNLSAEFLRVYSPAADAKIR 127

Query: 61  SIGGEKVISGRRYVGIMSAEPVGNYGVRILFDDLHKTGIYSWDYFYHLGSNKFTLLRNYV 120
           SIGGEKVISGRR+VGIMSAEPVGNYGVRILFDDLH+TGIYSWDYF+HLGSNKFTLLRNYV
Sbjct: 128 SIGGEKVISGRRHVGIMSAEPVGNYGVRILFDDLHRTGIYSWDYFFHLGSNKFTLLRNYV 187

Query: 121 KTLKKHGLSRDPPRRK 137
           KTLKKHGLSRDPP+RK
Sbjct: 188 KTLKKHGLSRDPPKRK 203

[Close]

BLAST of Lcy09g020410 vs. TAIR 10
Match: AT3G27340.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: oxidation reduction; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Gamma-butyrobetaine dioxygenase/Trimethyllysine dioxygenase, N-terminal (InterPro:IPR010376); Has 1035 Blast hits to 1035 proteins in 399 species: Archae - 0; Bacteria - 765; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 231 (source: NCBI BLink). )

HSP 1 Score: 194.1 bits (492), Expect = 7.2e-50
Identity = 90/127 (70.87%), Postives = 109/127 (85.83%), Query Frame = 0


Query: 9   RTIHTT--VDAPQITSFALRVPKYVEVKFADGSVFNLSAEFLRIYSPAVDAKVRSIGGEK 68
           R +H T  +  P+++ F++  PK VEV++ADG+ FN S+EFLRI+SPA D KVRSIGGEK
Sbjct: 10  RRVHGTSFITIPKLSGFSIVSPKQVEVEYADGTKFNFSSEFLRIHSPAADGKVRSIGGEK 69

Query: 69  VISGRRYVGIMSAEPVGNYGVRILFDDLHKTGIYSWDYFYHLGSNKFTLLRNYVKTLKKH 128
           VISGRRYVGIMSAEPVGNYGVR++FDDLH+TGIY WDYFY LGSNKF L+RNY+KTL+KH
Sbjct: 70  VISGRRYVGIMSAEPVGNYGVRLVFDDLHRTGIYPWDYFYELGSNKFGLMRNYIKTLQKH 129

Query: 129 GLSRDPP 134
            LSR+PP
Sbjct: 130 NLSREPP 136

[Close]

BLAST of Lcy09g020410 vs. TAIR 10
Match: AT3G27340.3 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: oxidation reduction; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Gamma-butyrobetaine dioxygenase/Trimethyllysine dioxygenase, N-terminal (InterPro:IPR010376); Has 945 Blast hits to 945 proteins in 390 species: Archae - 0; Bacteria - 710; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 196 (source: NCBI BLink). )

HSP 1 Score: 172.9 bits (437), Expect = 1.7e-43
Identity = 85/127 (66.93%), Postives = 101/127 (79.53%), Query Frame = 0


Query: 9   RTIHTT--VDAPQITSFALRVPKYVEVKFADGSVFNLSAEFLRIYSPAVDAKVRSIGGEK 68
           R +H T  +  P+++ F++  PK VEV++ADG+ FN S+EFLRI+SPA D KVRSIGGEK
Sbjct: 10  RRVHGTSFITIPKLSGFSIVSPKQVEVEYADGTKFNFSSEFLRIHSPAADGKVRSIGGEK 69

Query: 69  VISGRRYVGIMSAEPVGNYGVRILFDDLHKTGIYSWDYFYHLGSNKFTLLRNYVKTLKKH 128
           VISGRRYVGIMSAEPVGNYGVR        TGIY WDYFY LGSNKF L+RNY+KTL+KH
Sbjct: 70  VISGRRYVGIMSAEPVGNYGVR--------TGIYPWDYFYELGSNKFGLMRNYIKTLQKH 128

Query: 129 GLSRDPP 134
            LSR+PP
Sbjct: 130 NLSREPP 128

[Close]

BLAST of Lcy09g020410 vs. TAIR 10
Match: AT3G27340.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: oxidation reduction; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Gamma-butyrobetaine dioxygenase/Trimethyllysine dioxygenase, N-terminal (InterPro:IPR010376); Has 693 Blast hits to 693 proteins in 282 species: Archae - 0; Bacteria - 530; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink). )

HSP 1 Score: 116.7 bits (291), Expect = 1.5e-26
Identity = 57/83 (68.67%), Postives = 69/83 (83.13%), Query Frame = 0


Query: 9  RTIHTT--VDAPQITSFALRVPKYVEVKFADGSVFNLSAEFLRIYSPAVDAKVRSIGGEK 68
          R +H T  +  P+++ F++  PK VEV++ADG+ FN S+EFLRI+SPA D KVRSIGGEK
Sbjct: 10 RRVHGTSFITIPKLSGFSIVSPKQVEVEYADGTKFNFSSEFLRIHSPAADGKVRSIGGEK 69

Query: 69 VISGRRYVGIMSAEPVGNYGVRI 90
          VISGRRYVGIMSAEPVGNYGVRI
Sbjct: 70 VISGRRYVGIMSAEPVGNYGVRI 92

The following BLAST results are available for this feature:

BLAST of Lcy09g020410 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy09g020410 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J9C4	1.3e-67	93.38	uncharacterized protein LOC111482460 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1F9C8	6.5e-67	92.65	uncharacterized protein LOC111442002 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1DIS9	4.2e-66	91.85	uncharacterized protein LOC111021468 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A1S3BNF3	5.2e-64	89.71	uncharacterized protein LOC103491759 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A4U5PZX0	1.1e-58	79.41	GBBH-like_N domain-containing protein OS=Populus alba OX=43335 GN=D5086_00001598...	[more]

BLAST of Lcy09g020410 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022984013.1	2.7e-67	93.38	uncharacterized protein LOC111482460 isoform X1 [Cucurbita maxima]	[more]
XP_022935010.1	1.4e-66	92.65	uncharacterized protein LOC111442002 isoform X1 [Cucurbita moschata]	[more]
XP_022154140.1	8.8e-66	91.85	uncharacterized protein LOC111021468 isoform X1 [Momordica charantia]	[more]
KAG7017806.1	1.1e-65	92.65	hypothetical protein SDJN02_19672 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_031737737.1	4.4e-65	89.71	uncharacterized protein LOC101219823 isoform X1 [Cucumis sativus]	[more]

BLAST of Lcy09g020410 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G27340.1	7.2e-50	70.87	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: oxidation reduction; EXPR...	[more]
AT3G27340.3	1.7e-43	66.93	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: oxidation reduction; EXPR...	[more]
AT3G27340.2	1.5e-26	68.67	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: oxidation reduction; EXPR...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010376	Gamma-butyrobetaine hydroxylase-like, N-terminal	PFAM	PF06155	GBBH-like_N	coord: 29..105 e-value: 7.6E-20 score: 71.3
IPR038492	GBBH-like, N-terminal domain superfamily	GENE3D	3.30.2020.30		coord: 16..110 e-value: 1.0E-17 score: 66.1
None	No IPR available	PANTHER	PTHR35303:SF6	BNAA06G32170D PROTEIN	coord: 9..135
None	No IPR available	PANTHER	PTHR35303	OS02G0197800 PROTEIN	coord: 9..135

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy09g020410.1	Lcy09g020410.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding