Lcy09g020130 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy09g020130
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Zinc finger BED domain-containing protein RICESLEEPER 3-like
Location	Chr09: 45306255 .. 45307971 (+)
RNA-Seq Expression	Lcy09g020130
Synteny	Lcy09g020130

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCGACTTCTTCACCTCTCTGCACACGTCGTCCCCCTCCGAACTTCTGTCACATCCGCCGTCGGTCGGGTTTCGATCGGTAAACCGACTTCCGCCGCACCGACGTCAGAGTTTTGTTCGGATTTTGTATTTTCCAATTTCACTCCCGGCAATAACAATGCCTTTTAAACTCGAATTTTACGGTTTTCGATTTTCATCTCGTGCTCTCAACAAAAACCCTACGAACTCGCCGCCGTCCTCTTCTCCTCCGTCGTTCCCACCGCCGCTTGCCGCCCGAAATAGTCGCCGGCGCCCTCCGATACTGGTAATTTCCGAAGCTTTGATCCTTGCATTTTTATTTCGCTAGATTAAGATGCTCGAATATCCGGCCCCGTTGCTTTGTTTATTTAGACGCCTCTCTCTTCTCTCTTCACCGCCAGCCGCGATTTCCGCCGTCGTTCGACGCCGATTTTTTGCCCTAAGAAGTCGCCGACATCCCCTTTCTTTGATTTTCATTTCAGTTTTTGTCAAATCCCACGTAGGAATGAAAGTCGTGTTTGAACCCACTATTTTTTACATCTTATTATTTGTCATTAGTTTCAAGAATCATTACTTCGATAACTTTTTTTCCCAAACCATGTGAAGTAATCAGAGAATAAAGAAAGAAACAGAAGTTTGGAGGTTAGTTATAATCTCAAACAATAAAAAGACTAATCTATGTTACTTTTTCATTAAAGATTTTAATGATAATGACCAAATTTGAACGGCTAGTGTCAGGGGAGCTTGGATTTGTTCCCCATTATTGTTTCTTTCGATGAAACAAGAATCAATTGAAAGTGAAACCAACACTTGACATTGACTGAATCTGAAAGTGATGTTAGTTTCGATTGGATCTTCTTGTTAGCCTTAGAAGTAGAGACAATGTACGTTATCTACCTTTATTGTCTATGCACTCTAATGAGTTCTTTCAAATTTGTGTAGGATACATCATGAATACCCCATGTGCAGATGAGGTCGAGGTTGCGAACGAGGATGAAAATGCTACTACAGAAGATCAAGACGATAGGAACGTCGACGATGATCCTTATGATGATGCTGAGTGTGAATATTGTGGTGCTTTATGCACCTGTCATTCAAAGAGAACTAGGAAGGAAAATATGGAAGCACATCCCGAGAACTACGGCAGTGAGTATTCTTTCCTTCGTACATGTTGTAGTCGGGCTGAATATGCATTTGAAAAGAATTTGATTTTAGAAAGTGAGGAGGAGGAGGAGGAGGAGGAGGTAGGTGAGAATTCGGAGGTAGGTGAAGTTTTTAATGCAGAAAATGCAAGAATACTAATTGCAAAAATGATCATAATTGATAAATTGCCTTTCAATTTTATTAAGGATACAAGGTTTAGAAGGTTTTTGGAGAAGACTGTGTGTGAATACATTCCAGAGTTTGTCATTCCCTCTCAATCTGAAATAGCTAGAGAGATATTGGTAATATATGTAAATGAGAGAGAATATTTGAAGAAAATTTTTGCAGAACAAGGTCCTAGAGTTTCTCTCACAATCGATACTTGGACGTCGGATCAAGATTTGAACTATATGGTTCTTACTGTACATTTCATTGATATTGAATGGAAAATGCACAAGAGGATTCTTCATTTTCGTCCAATTGAGGATCTCGATGGAGAGACTATAGGAAAAGAAGTAGTAGGATATTTGAAAAATGGGGCATTGAAAAAATATTGA

mRNA sequence

TCCGACTTCTTCACCTCTCTGCACACGTCGTCCCCCTCCGAACTTCTGTCACATCCGCCGTCGGTCGGGTTTCGATCGGTAAACCGACTTCCGCCGCACCGACGTCAGAGTTTTGTTCGGATTTTGTATTTTCCAATTTCACTCCCGGCAATAACAATGCCTTTTAAACTCGAATTTTACGGTTTTCGATTTTCATCTCGTGCTCTCAACAAAAACCCTACGAACTCGCCGCCGTCCTCTTCTCCTCCGTCGTTCCCACCGCCGCTTGCCGCCCGAAATAGTCGCCGGCGCCCTCCGATACTGGATACATCATGAATACCCCATGTGCAGATGAGGTCGAGGTTGCGAACGAGGATGAAAATGCTACTACAGAAGATCAAGACGATAGGAACGTCGACGATGATCCTTATGATGATGCTGAGTGTGAATATTGTGGTGCTTTATGCACCTGTCATTCAAAGAGAACTAGGAAGGAAAATATGGAAGCACATCCCGAGAACTACGGCAGTGAGTATTCTTTCCTTCGTACATGTTGTAGTCGGGCTGAATATGCATTTGAAAAGAATTTGATTTTAGAAAGTGAGGAGGAGGAGGAGGAGGAGGAGGTAGGTGAGAATTCGGAGGTAGGTGAAGTTTTTAATGCAGAAAATGCAAGAATACTAATTGCAAAAATGATCATAATTGATAAATTGCCTTTCAATTTTATTAAGGATACAAGGTTTAGAAGGTTTTTGGAGAAGACTGTGTGTGAATACATTCCAGAGTTTGTCATTCCCTCTCAATCTGAAATAGCTAGAGAGATATTGGTAATATATGTAAATGAGAGAGAATATTTGAAGAAAATTTTTGCAGAACAAGGTCCTAGAGTTTCTCTCACAATCGATACTTGGACGTCGGATCAAGATTTGAACTATATGGTTCTTACTGTACATTTCATTGATATTGAATGGAAAATGCACAAGAGGATTCTTCATTTTCGTCCAATTGAGGATCTCGATGGAGAGACTATAGGAAAAGAAGTAGTAGGATATTTGAAAAATGGGGCATTGAAAAAATATTGA

Coding sequence (CDS)

ATGAATACCCCATGTGCAGATGAGGTCGAGGTTGCGAACGAGGATGAAAATGCTACTACAGAAGATCAAGACGATAGGAACGTCGACGATGATCCTTATGATGATGCTGAGTGTGAATATTGTGGTGCTTTATGCACCTGTCATTCAAAGAGAACTAGGAAGGAAAATATGGAAGCACATCCCGAGAACTACGGCAGTGAGTATTCTTTCCTTCGTACATGTTGTAGTCGGGCTGAATATGCATTTGAAAAGAATTTGATTTTAGAAAGTGAGGAGGAGGAGGAGGAGGAGGAGGTAGGTGAGAATTCGGAGGTAGGTGAAGTTTTTAATGCAGAAAATGCAAGAATACTAATTGCAAAAATGATCATAATTGATAAATTGCCTTTCAATTTTATTAAGGATACAAGGTTTAGAAGGTTTTTGGAGAAGACTGTGTGTGAATACATTCCAGAGTTTGTCATTCCCTCTCAATCTGAAATAGCTAGAGAGATATTGGTAATATATGTAAATGAGAGAGAATATTTGAAGAAAATTTTTGCAGAACAAGGTCCTAGAGTTTCTCTCACAATCGATACTTGGACGTCGGATCAAGATTTGAACTATATGGTTCTTACTGTACATTTCATTGATATTGAATGGAAAATGCACAAGAGGATTCTTCATTTTCGTCCAATTGAGGATCTCGATGGAGAGACTATAGGAAAAGAAGTAGTAGGATATTTGAAAAATGGGGCATTGAAAAAATATTGA

Protein sequence

MNTPCADEVEVANEDENATTEDQDDRNVDDDPYDDAECEYCGALCTCHSKRTRKENMEAHPENYGSEYSFLRTCCSRAEYAFEKNLILESEEEEEEEEVGENSEVGEVFNAENARILIAKMIIIDKLPFNFIKDTRFRRFLEKTVCEYIPEFVIPSQSEIAREILVIYVNEREYLKKIFAEQGPRVSLTIDTWTSDQDLNYMVLTVHFIDIEWKMHKRILHFRPIEDLDGETIGKEVVGYLKNGALKKY

Homology

[Close]

BLAST of Lcy09g020130 vs. ExPASy Swiss-Prot
Match: Q6AVI0 (Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0733400 PE=2 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 8.7e-14
Identity = 40/130 (30.77%), Postives = 66/130 (50.77%), Query Frame = 0


Query: 109 FNAENARILIAKMIIIDKLPFNFIKDTRFRRFLEKTVCEYIPEFVIPSQSEIAREILVIY 168
           F+ + +   +AKMII+   P + ++   F  F++       P F +     +  E+  +Y
Sbjct: 163 FDQDRSCSYLAKMIILHDYPLHIVQQPAFTTFIDSLQ----PRFRVVDVETMEGEVYAVY 222

Query: 169 VNEREYLKKIFAEQGPRVSLTIDTWTSDQDLNYMVLTVHFIDIEWKMHKRILHFRPIEDL 228
             E+E L + F+    R+SLTI  WT+ Q L Y+ L   FID EWK+H+R+L+F  +   
Sbjct: 223 QKEKENLMQAFSTMPGRISLTIGLWTTSQTLGYVSLAGQFIDSEWKIHRRMLNFMMVSSP 282

Query: 229 DGETIGKEVV 239
             E    E +
Sbjct: 283 HSENALSEAI 288

[Close]

BLAST of Lcy09g020130 vs. ExPASy Swiss-Prot
Match: B9FJG3 (Zinc finger BED domain-containing protein RICESLEEPER 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0239150 PE=3 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.5e-13
Identity = 41/130 (31.54%), Postives = 64/130 (49.23%), Query Frame = 0


Query: 109 FNAENARILIAKMIIIDKLPFNFIKDTRFRRFLEKTVCEYIPEFVIPSQSEIAREILVIY 168
           F+ E +   +AKMII+   P + ++   F  F++       P F +     +  E+  +Y
Sbjct: 163 FDQERSCSYLAKMIILHDYPLHIVQQPAFTTFIDSLQ----PRFRVVDVETMEWEVYAVY 222

Query: 169 VNEREYLKKIFAEQGPRVSLTIDTWTSDQDLNYMVLTVHFIDIEWKMHKRILHFRPIEDL 228
             E+E L + F     R+SL I  WT+ Q L Y+ L   FID EWKMH+R+L+F  +   
Sbjct: 223 QKEKENLMQAFNTMPGRISLAIGLWTTSQTLGYVSLAGQFIDSEWKMHRRMLNFMMVSSP 282

Query: 229 DGETIGKEVV 239
             E    E +
Sbjct: 283 HSENALSEAI 288

[Close]

BLAST of Lcy09g020130 vs. ExPASy Swiss-Prot
Match: Q75HY5 (Zinc finger BED domain-containing protein RICESLEEPER 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0583200 PE=2 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.4e-11
Identity = 37/131 (28.24%), Postives = 64/131 (48.85%), Query Frame = 0


Query: 108 VFNAENARILIAKMIIIDKLPFNFIKDTRFRRFLEKTVCEYIPEFVIPSQSEIAREILVI 167
           +F+ +     +AKMII+   P + ++   F  F+        P F +     I  ++  +
Sbjct: 202 MFDQDRTCSNLAKMIILHDYPLHIVEQRGFTAFIGSLQ----PRFRVIDVDTIEGQVHSV 261

Query: 168 YVNEREYLKKIFAEQGPRVSLTIDTWTSDQDLNYMVLTVHFIDIEWKMHKRILHFRPIED 227
           Y  ERE L  +F+    R+SLT+  W + Q L Y+ L   FID EW++H+R+++F  +  
Sbjct: 262 YQKERENLMHVFSTVPGRISLTVRLWATSQTLGYISLAAQFIDTEWRVHRRMVNFMMVSS 321

Query: 228 LDGETIGKEVV 239
              E    E +
Sbjct: 322 PHSENSLSEAI 328

[Close]

BLAST of Lcy09g020130 vs. ExPASy Swiss-Prot
Match: Q0JMB2 (Zinc finger BED domain-containing protein RICESLEEPER 4 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0518400 PE=2 SV=3)

HSP 1 Score: 70.9 bits (172), Expect = 2.4e-11
Identity = 37/134 (27.61%), Postives = 72/134 (53.73%), Query Frame = 0


Query: 87  ILESEEEEEEEEVGENSEVGEVFNAENARILIAKMIIIDKLPFNFIKDTRFRRFLEKTVC 146
           +L+  ++        +S     F+ E + + +AKMII++  P + ++   F  F++    
Sbjct: 108 VLKDRQKSRRYTTYNSSNENASFDQERSCLRLAKMIILNDYPLHIVQQPAFLSFVDSVQ- 167

Query: 147 EYIPEFVIPSQSEIAREILVIYVNEREYLKKIFAEQGPRVSLTIDTWTSDQDLNYMVLTV 206
              P F +     I  E+  IY+ E+++L++  A    R+SLT+ + T++Q + Y+ L  
Sbjct: 168 ---PNFKMVDIGTIETEVYAIYLKEKDHLQQALANIPGRISLTVGSLTTNQSIRYISLAA 227

Query: 207 HFIDIEWKMHKRIL 221
            FID EW++H+R+L
Sbjct: 228 QFIDSEWRLHRRVL 237

[Close]

BLAST of Lcy09g020130 vs. ExPASy Swiss-Prot
Match: P08770 (Putative AC transposase OS=Zea mays OX=4577 PE=2 SV=2)

HSP 1 Score: 65.9 bits (159), Expect = 7.6e-10
Identity = 36/105 (34.29%), Postives = 59/105 (56.19%), Query Frame = 0


Query: 122 IIIDKLPFNFIKDTRFRRFLEKTVCEYIPEFVIPSQSEIAREILVIYVNEREYLKKIFAE 181
           II+ + PFN ++   F  F++       P F I S+    + I+ +Y+ E+E L     +
Sbjct: 236 IIMHEYPFNIVEHEYFVEFVK----SLRPHFPIKSRVTARKYIMDLYLEEKEKLYGKLKD 295

Query: 182 QGPRVSLTIDTWTSDQDLNYMVLTVHFIDIEWKMHKRILHFRPIE 227
              R S T+D WTS Q+ +YM +T+H+ID +W + KRI+ F  +E
Sbjct: 296 VQSRFSTTMDMWTSCQNKSYMCVTIHWIDDDWCLQKRIVGFFHVE 336

[Close]

BLAST of Lcy09g020130 vs. ExPASy TrEMBL
Match: A0A6J1DGW5 (zinc finger BED domain-containing protein RICESLEEPER 2-like OS=Momordica charantia OX=3673 GN=LOC111019972 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 7.1e-43
Identity = 119/266 (44.74%), Postives = 164/266 (61.65%), Query Frame = 0


Query: 1   MNTPCADEVEV--ANEDEN-------ATTEDQD---DRNVDDDPYDDAECEYCGALCTCH 60
           MNTPC +EVEV    EDEN       AT + Q+   ++   D P+   E + CGAL T H
Sbjct: 1   MNTPCEEEVEVKDVKEDENVGVSPLTATMKGQNGTKEKGNVDAPH--VERKNCGALYTSH 60

Query: 61  SKRTRKENMEAHPENYGSEYSFLRTCCSRAEYAFEKNLILESEEEEEEE-------EVGE 120
           SKR +   ME   E Y  ++    T  +    A E++L   SEEE E+        +  +
Sbjct: 61  SKRNK---MEEDLEIYSDKHPQHCTFYNGGXNANEEDLNSVSEEEVEDYPDLWDSFDSPD 120

Query: 121 NSEVGEVFNAENARILIAKMIIIDKLPFNFIKDTRFRRFLEKTVCEYIPEFVIPSQSEIA 180
           +S    VFNA++ARILIA+MIIIDKLP NF+ D  FR F+EK +C + PEFV+PS + +A
Sbjct: 121 SSTPRGVFNAKSARILIAEMIIIDKLPLNFVNDEGFRMFMEKIMCAFAPEFVVPSLTTVA 180

Query: 181 REILVIYVNEREYLKKIFAEQGPRVSLTIDTWTSDQDLNYMVLTVHFIDIEWKMHKRILH 240
           R+IL IY + + +L+++       VSLTI+TWTS+QD+NYMVLT HFI   W + ++IL+
Sbjct: 181 RDILEIYQSRKXFLRRLIFNDNSTVSLTINTWTSNQDMNYMVLTGHFITFGWTIERKILN 240

Query: 241 FRPIEDLDGETIGKEVVGYLKNGALK 248
           FR IE+L GETIG+EV   LK   ++
Sbjct: 241 FRQIENLRGETIGREVEKCLKQWGIE 261

[Close]

BLAST of Lcy09g020130 vs. ExPASy TrEMBL
Match: A0A5D3BX83 (Zinc finger BED domain-containing protein RICESLEEPER 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold863G001050 PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 2.1e-39
Identity = 91/221 (41.18%), Postives = 138/221 (62.44%), Query Frame = 0


Query: 31  DPYDD-AECEYCGALCTCHSKRTRKENMEAHPENYGSEYSFLRTCCSRAEYAFEKNLILE 90
           DP D  A+C+YCG +  CHSKR     M+ H EN           C +  Y  +++    
Sbjct: 69  DPNDPRAKCKYCGVVYACHSKRNGTGTMKHHLEN-----------CKKYPYQKKRDQTQM 128

Query: 91  SEEEEEEEEVGENSE--VGEVFNAENARILIAKMIIIDKLPFNFIKDTRFRRFLEKTVCE 150
           +   + +++VG+NS   V E F+ E  R  + +MII+D+LPF F++   F++F++K  C 
Sbjct: 129 TLAFKPKDKVGDNSSQLVCESFSLEGCRDALVEMIIVDELPFKFVEGKGFKKFVDKLTCG 188

Query: 151 YIPEFVIPSQSEIAREILVIYVNEREYLKKIFAEQGPRVSLTIDTWTSDQDLNYMVLTVH 210
               FV+PS+  +AR++L +YVNE+ +L+ +F +   RVSLT D WTS Q++NYMVLT H
Sbjct: 189 NHTRFVVPSRFTVARDVLKLYVNEKNHLRDMFVKNKYRVSLTTDCWTSGQNINYMVLTAH 248

Query: 211 FIDIEWKMHKRILHFRPIEDLDGETIGKEVVGYLKNGALKK 249
           FID +WK+HKRIL F PIE+  G+TIGK +   LK+  +++
Sbjct: 249 FIDSDWKLHKRILSFSPIENHKGDTIGKTIEKNLKDWGIER 278

[Close]

BLAST of Lcy09g020130 vs. ExPASy TrEMBL
Match: A0A5A7URG0 (Zinc finger BED domain-containing protein RICESLEEPER 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold970G00400 PE=4 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 6.2e-39
Identity = 91/221 (41.18%), Postives = 137/221 (61.99%), Query Frame = 0


Query: 31  DPYDD-AECEYCGALCTCHSKRTRKENMEAHPENYGSEYSFLRTCCSRAEYAFEKNLILE 90
           DP D  A+C+YCG +  CHSK      M+ H EN           C +  Y  +++    
Sbjct: 69  DPNDPRAKCKYCGVVYACHSKHNGTGTMKHHLEN-----------CKKYPYQKKRDQTQM 128

Query: 91  SEEEEEEEEVGENSE--VGEVFNAENARILIAKMIIIDKLPFNFIKDTRFRRFLEKTVCE 150
           +   + +++VG+NS   V E F+ E  R  + +MII+D+LPF F+    F++F++K  CE
Sbjct: 129 TLAFKPKDKVGDNSSQLVCESFSLEGCREALVEMIIVDELPFKFVDGKGFKKFVDKLTCE 188

Query: 151 YIPEFVIPSQSEIAREILVIYVNEREYLKKIFAEQGPRVSLTIDTWTSDQDLNYMVLTVH 210
               FV+PS+  +AR++L +YVNE+  L+ +F +   RVSLT D WTS Q++NYMVLT H
Sbjct: 189 NHTRFVVPSRFTVARDVLKLYVNEKNRLRDMFVKNKYRVSLTTDCWTSGQNINYMVLTTH 248

Query: 211 FIDIEWKMHKRILHFRPIEDLDGETIGKEVVGYLKNGALKK 249
           FID +WK+HKRIL+F PIE+  G+TIGK +   LK+  +++
Sbjct: 249 FIDSDWKLHKRILNFCPIENHKGDTIGKTIEKNLKDWGIER 278

[Close]

BLAST of Lcy09g020130 vs. ExPASy TrEMBL
Match: A0A5A7SVU3 (Zinc finger BED domain-containing protein RICESLEEPER 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold845G00760 PE=4 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 6.2e-39
Identity = 91/221 (41.18%), Postives = 137/221 (61.99%), Query Frame = 0


Query: 31  DPYDD-AECEYCGALCTCHSKRTRKENMEAHPENYGSEYSFLRTCCSRAEYAFEKNLILE 90
           DP D  A+C+YCG +  CHSKR     M+ H EN           C +  Y  +++    
Sbjct: 69  DPNDPRAKCKYCGVVYACHSKRNGTGTMKHHLEN-----------CKKYPYQKKRDQTQM 128

Query: 91  SEEEEEEEEVGENSE--VGEVFNAENARILIAKMIIIDKLPFNFIKDTRFRRFLEKTVCE 150
           +   + +++VG+NS   V E F+ +  R  + +MII+D+LPF F++   F++F++K  C 
Sbjct: 129 TLAFKPKDKVGDNSSQLVCESFSLDGCRDALVEMIIVDELPFKFVEGKGFKKFVDKLTCG 188

Query: 151 YIPEFVIPSQSEIAREILVIYVNEREYLKKIFAEQGPRVSLTIDTWTSDQDLNYMVLTVH 210
               FV+PS+  +AR++L +YVNE+  L+ +F +   RVSLT D WTS Q++NYMVLT H
Sbjct: 189 NHTRFVVPSRFTVARDVLKLYVNEKNRLRDMFVKNKYRVSLTTDCWTSGQNINYMVLTAH 248

Query: 211 FIDIEWKMHKRILHFRPIEDLDGETIGKEVVGYLKNGALKK 249
           FID +WK+HKRIL F PIE+  G+TIGK +   LK+  ++K
Sbjct: 249 FIDSDWKLHKRILSFSPIENHKGDTIGKTIEKNLKDWGIEK 278

[Close]

BLAST of Lcy09g020130 vs. ExPASy TrEMBL
Match: A0A5D3CR68 (Zinc finger BED domain-containing protein RICESLEEPER 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G001050 PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 1.4e-38
Identity = 90/221 (40.72%), Postives = 137/221 (61.99%), Query Frame = 0


Query: 31  DPYDD-AECEYCGALCTCHSKRTRKENMEAHPENYGSEYSFLRTCCSRAEYAFEKNLILE 90
           DP D  A+C+YCG +  CHSKR     M+ H EN           C +  Y  +++    
Sbjct: 69  DPNDPRAKCKYCGVVYACHSKRNGTGTMKHHLEN-----------CKKYPYQKKRDQTQM 128

Query: 91  SEEEEEEEEVGENSE--VGEVFNAENARILIAKMIIIDKLPFNFIKDTRFRRFLEKTVCE 150
           +   + +++VG+NS   V E F+ +  R  + +MII+D+LPF F++   F++F++K  C 
Sbjct: 129 TLAFKPKDKVGDNSSQLVCESFSLDGCRDALVEMIIVDELPFKFVEGKGFKKFVDKLTCG 188

Query: 151 YIPEFVIPSQSEIAREILVIYVNEREYLKKIFAEQGPRVSLTIDTWTSDQDLNYMVLTVH 210
               FV+PS+  +AR++L +YVNE+  L+ +F +   RVSLT D WTS Q++NYMVLT H
Sbjct: 189 NHTRFVVPSRFTVARDVLKLYVNEKNRLRDMFVKNKYRVSLTTDCWTSGQNINYMVLTAH 248

Query: 211 FIDIEWKMHKRILHFRPIEDLDGETIGKEVVGYLKNGALKK 249
           FID +WK+HKRIL F PIE+  G+TIGK +   LK+  +++
Sbjct: 249 FIDSDWKLHKRILSFSPIENHKGDTIGKTIEKNLKDWGIER 278

[Close]

BLAST of Lcy09g020130 vs. NCBI nr
Match: XP_022152195.1 (zinc finger BED domain-containing protein RICESLEEPER 2-like [Momordica charantia] >XP_022152196.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Momordica charantia])

HSP 1 Score: 184.1 bits (466), Expect = 1.5e-42
Identity = 119/266 (44.74%), Postives = 164/266 (61.65%), Query Frame = 0


Query: 1   MNTPCADEVEV--ANEDEN-------ATTEDQD---DRNVDDDPYDDAECEYCGALCTCH 60
           MNTPC +EVEV    EDEN       AT + Q+   ++   D P+   E + CGAL T H
Sbjct: 1   MNTPCEEEVEVKDVKEDENVGVSPLTATMKGQNGTKEKGNVDAPH--VERKNCGALYTSH 60

Query: 61  SKRTRKENMEAHPENYGSEYSFLRTCCSRAEYAFEKNLILESEEEEEEE-------EVGE 120
           SKR +   ME   E Y  ++    T  +    A E++L   SEEE E+        +  +
Sbjct: 61  SKRNK---MEEDLEIYSDKHPQHCTFYNGGXNANEEDLNSVSEEEVEDYPDLWDSFDSPD 120

Query: 121 NSEVGEVFNAENARILIAKMIIIDKLPFNFIKDTRFRRFLEKTVCEYIPEFVIPSQSEIA 180
           +S    VFNA++ARILIA+MIIIDKLP NF+ D  FR F+EK +C + PEFV+PS + +A
Sbjct: 121 SSTPRGVFNAKSARILIAEMIIIDKLPLNFVNDEGFRMFMEKIMCAFAPEFVVPSLTTVA 180

Query: 181 REILVIYVNEREYLKKIFAEQGPRVSLTIDTWTSDQDLNYMVLTVHFIDIEWKMHKRILH 240
           R+IL IY + + +L+++       VSLTI+TWTS+QD+NYMVLT HFI   W + ++IL+
Sbjct: 181 RDILEIYQSRKXFLRRLIFNDNSTVSLTINTWTSNQDMNYMVLTGHFITFGWTIERKILN 240

Query: 241 FRPIEDLDGETIGKEVVGYLKNGALK 248
           FR IE+L GETIG+EV   LK   ++
Sbjct: 241 FRQIENLRGETIGREVEKCLKQWGIE 261

[Close]

BLAST of Lcy09g020130 vs. NCBI nr
Match: TYK03730.1 (zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 172.6 bits (436), Expect = 4.4e-39
Identity = 91/221 (41.18%), Postives = 138/221 (62.44%), Query Frame = 0


Query: 31  DPYDD-AECEYCGALCTCHSKRTRKENMEAHPENYGSEYSFLRTCCSRAEYAFEKNLILE 90
           DP D  A+C+YCG +  CHSKR     M+ H EN           C +  Y  +++    
Sbjct: 69  DPNDPRAKCKYCGVVYACHSKRNGTGTMKHHLEN-----------CKKYPYQKKRDQTQM 128

Query: 91  SEEEEEEEEVGENSE--VGEVFNAENARILIAKMIIIDKLPFNFIKDTRFRRFLEKTVCE 150
           +   + +++VG+NS   V E F+ E  R  + +MII+D+LPF F++   F++F++K  C 
Sbjct: 129 TLAFKPKDKVGDNSSQLVCESFSLEGCRDALVEMIIVDELPFKFVEGKGFKKFVDKLTCG 188

Query: 151 YIPEFVIPSQSEIAREILVIYVNEREYLKKIFAEQGPRVSLTIDTWTSDQDLNYMVLTVH 210
               FV+PS+  +AR++L +YVNE+ +L+ +F +   RVSLT D WTS Q++NYMVLT H
Sbjct: 189 NHTRFVVPSRFTVARDVLKLYVNEKNHLRDMFVKNKYRVSLTTDCWTSGQNINYMVLTAH 248

Query: 211 FIDIEWKMHKRILHFRPIEDLDGETIGKEVVGYLKNGALKK 249
           FID +WK+HKRIL F PIE+  G+TIGK +   LK+  +++
Sbjct: 249 FIDSDWKLHKRILSFSPIENHKGDTIGKTIEKNLKDWGIER 278

[Close]

BLAST of Lcy09g020130 vs. NCBI nr
Match: KAA0057700.1 (zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa] >TYK27486.1 zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 171.0 bits (432), Expect = 1.3e-38
Identity = 91/221 (41.18%), Postives = 137/221 (61.99%), Query Frame = 0


Query: 31  DPYDD-AECEYCGALCTCHSKRTRKENMEAHPENYGSEYSFLRTCCSRAEYAFEKNLILE 90
           DP D  A+C+YCG +  CHSK      M+ H EN           C +  Y  +++    
Sbjct: 69  DPNDPRAKCKYCGVVYACHSKHNGTGTMKHHLEN-----------CKKYPYQKKRDQTQM 128

Query: 91  SEEEEEEEEVGENSE--VGEVFNAENARILIAKMIIIDKLPFNFIKDTRFRRFLEKTVCE 150
           +   + +++VG+NS   V E F+ E  R  + +MII+D+LPF F+    F++F++K  CE
Sbjct: 129 TLAFKPKDKVGDNSSQLVCESFSLEGCREALVEMIIVDELPFKFVDGKGFKKFVDKLTCE 188

Query: 151 YIPEFVIPSQSEIAREILVIYVNEREYLKKIFAEQGPRVSLTIDTWTSDQDLNYMVLTVH 210
               FV+PS+  +AR++L +YVNE+  L+ +F +   RVSLT D WTS Q++NYMVLT H
Sbjct: 189 NHTRFVVPSRFTVARDVLKLYVNEKNRLRDMFVKNKYRVSLTTDCWTSGQNINYMVLTTH 248

Query: 211 FIDIEWKMHKRILHFRPIEDLDGETIGKEVVGYLKNGALKK 249
           FID +WK+HKRIL+F PIE+  G+TIGK +   LK+  +++
Sbjct: 249 FIDSDWKLHKRILNFCPIENHKGDTIGKTIEKNLKDWGIER 278

[Close]

BLAST of Lcy09g020130 vs. NCBI nr
Match: KAA0033275.1 (zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 171.0 bits (432), Expect = 1.3e-38
Identity = 91/221 (41.18%), Postives = 137/221 (61.99%), Query Frame = 0


Query: 31  DPYDD-AECEYCGALCTCHSKRTRKENMEAHPENYGSEYSFLRTCCSRAEYAFEKNLILE 90
           DP D  A+C+YCG +  CHSKR     M+ H EN           C +  Y  +++    
Sbjct: 69  DPNDPRAKCKYCGVVYACHSKRNGTGTMKHHLEN-----------CKKYPYQKKRDQTQM 128

Query: 91  SEEEEEEEEVGENSE--VGEVFNAENARILIAKMIIIDKLPFNFIKDTRFRRFLEKTVCE 150
           +   + +++VG+NS   V E F+ +  R  + +MII+D+LPF F++   F++F++K  C 
Sbjct: 129 TLAFKPKDKVGDNSSQLVCESFSLDGCRDALVEMIIVDELPFKFVEGKGFKKFVDKLTCG 188

Query: 151 YIPEFVIPSQSEIAREILVIYVNEREYLKKIFAEQGPRVSLTIDTWTSDQDLNYMVLTVH 210
               FV+PS+  +AR++L +YVNE+  L+ +F +   RVSLT D WTS Q++NYMVLT H
Sbjct: 189 NHTRFVVPSRFTVARDVLKLYVNEKNRLRDMFVKNKYRVSLTTDCWTSGQNINYMVLTAH 248

Query: 211 FIDIEWKMHKRILHFRPIEDLDGETIGKEVVGYLKNGALKK 249
           FID +WK+HKRIL F PIE+  G+TIGK +   LK+  ++K
Sbjct: 249 FIDSDWKLHKRILSFSPIENHKGDTIGKTIEKNLKDWGIEK 278

[Close]

BLAST of Lcy09g020130 vs. NCBI nr
Match: XP_031739490.1 (zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis sativus] >KAE8651423.1 hypothetical protein Csa_002462 [Cucumis sativus])

HSP 1 Score: 170.2 bits (430), Expect = 2.2e-38
Identity = 97/228 (42.54%), Postives = 138/228 (60.53%), Query Frame = 0


Query: 30  DDPYDDAECEYCGALCTCHSKRTRKENMEAHPENYGSEYSFLRTCCS---------RAEY 89
           ++PY  A C+YCGA   CHSKR     M+ H E+   +Y F R   S         + E 
Sbjct: 56  NEPY--ARCKYCGATYACHSKRNGTGTMKNHLESC-KKYPFERKRDSFQKTSPFKPKEET 115

Query: 90  AFEKNLILESEEEEEEEEVGENSEVGEVFNAENARILIAKMIIIDKLPFNFIKDTRFRRF 149
           A    L L  E +EE +  G +  + E  N+E+ R  +A+MII++ LPF F++   F+RF
Sbjct: 116 AKTDPLQLVCEPKEETDGDGSSQVLCESINSESCRETLAEMIIMEALPFKFVESKGFKRF 175

Query: 150 LEKTVCEYIPEFVIPSQSEIAREILVIYVNEREYLKKIFAEQGPRVSLTIDTWTSDQDLN 209
           + K      P+FV+PS+  IAR+IL IYVNE++ LK IF +   +V LT D WTS+Q++N
Sbjct: 176 VSKLTGSQEPKFVVPSRFTIARDILKIYVNEKQKLKDIFVKMKCKVCLTTDCWTSEQNIN 235

Query: 210 YMVLTVHFIDIEWKMHKRILHFRPIEDLDGETIGKEVVGYLKNGALKK 249
           YMVLT HF+D +WK+HK+IL F  IE  +G TIGK +   LK+  +K+
Sbjct: 236 YMVLTAHFVDCDWKLHKKILSFSQIESHNGHTIGKAIEKNLKDWGIKR 280

[Close]

BLAST of Lcy09g020130 vs. TAIR 10
Match: AT3G42170.1 (BED zinc finger ;hAT family dimerisation domain )

HSP 1 Score: 65.1 bits (157), Expect = 9.2e-11
Identity = 35/113 (30.97%), Postives = 59/113 (52.21%), Query Frame = 0


Query: 109 FNAENARILIAKMIIIDKLPFNFIKDTRFRRFLEKTVCEYIPEFVIPSQSEIAREILVIY 168
           FN +  R  IAKMII+   P + ++   F  F++       P F   S + +  + +  Y
Sbjct: 160 FNQDKCRQEIAKMIIMHDYPLHMVQHPGFVSFVQSIQ----PHFDAVSFNNVQGDCVATY 219

Query: 169 VNEREYLKKIFAEQGPRVSLTIDTWTSDQDLNYMVLTVHFIDIEWKMHKRILH 222
           + E++ + K       R  LT+D WTS   L Y+ +T H+ID +WK+ K++L+
Sbjct: 220 LAEKQNVMKSLEGIPGRFCLTLDFWTSKLTLGYVFITAHYIDSDWKIQKKLLN 268

The following BLAST results are available for this feature:

BLAST of Lcy09g020130 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6AVI0	8.7e-14	30.77	Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. j...	[more]
B9FJG3	1.5e-13	31.54	Zinc finger BED domain-containing protein RICESLEEPER 1 OS=Oryza sativa subsp. j...	[more]
Q75HY5	1.4e-11	28.24	Zinc finger BED domain-containing protein RICESLEEPER 3 OS=Oryza sativa subsp. j...	[more]
Q0JMB2	2.4e-11	27.61	Zinc finger BED domain-containing protein RICESLEEPER 4 OS=Oryza sativa subsp. j...	[more]
P08770	7.6e-10	34.29	Putative AC transposase OS=Zea mays OX=4577 PE=2 SV=2	[more]

BLAST of Lcy09g020130 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DGW5	7.1e-43	44.74	zinc finger BED domain-containing protein RICESLEEPER 2-like OS=Momordica charan...	[more]
A0A5D3BX83	2.1e-39	41.18	Zinc finger BED domain-containing protein RICESLEEPER 3-like OS=Cucumis melo var...	[more]
A0A5A7URG0	6.2e-39	41.18	Zinc finger BED domain-containing protein RICESLEEPER 3-like OS=Cucumis melo var...	[more]
A0A5A7SVU3	6.2e-39	41.18	Zinc finger BED domain-containing protein RICESLEEPER 3-like OS=Cucumis melo var...	[more]
A0A5D3CR68	1.4e-38	40.72	Zinc finger BED domain-containing protein RICESLEEPER 3-like OS=Cucumis melo var...	[more]

BLAST of Lcy09g020130 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022152195.1	1.5e-42	44.74	zinc finger BED domain-containing protein RICESLEEPER 2-like [Momordica charanti...	[more]
TYK03730.1	4.4e-39	41.18	zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. ...	[more]
KAA0057700.1	1.3e-38	41.18	zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. ...	[more]
KAA0033275.1	1.3e-38	41.18	zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. ...	[more]
XP_031739490.1	2.2e-38	42.54	zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis sativus] >...	[more]

BLAST of Lcy09g020130 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G42170.1	9.2e-11	30.97	BED zinc finger ;hAT family dimerisation domain	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 9..32
None	No IPR available	PANTHER	PTHR23272:SF130	OS01G0698300 PROTEIN	coord: 95..240
None	No IPR available	PANTHER	PTHR23272	BED FINGER-RELATED	coord: 95..240
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 172..238

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy09g020130.1	Lcy09g020130.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005488	binding