Lcy09g019730 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy09g019730
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Retrotransposon protein
Location	Chr09: 44581527 .. 44588128 (-)
RNA-Seq Expression	Lcy09g019730
Synteny	Lcy09g019730

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGGAATCGATTGTTATTTATAGAAACTGGACGTTTGGCTGCGGAGCCACCGCGTTCACCCTAACCATGGTTAAGCTAATCCCAACCCTGGTTACCTCATATACATTTTATGTTTTTTTTTTTTTTTTTTATTGTTAAATTACAAATTTAGGGTCCGTTAGAATACCTTTTAGTCTAAGGGTGTGTTTGGTTTAACTTTTCAAGTGTTTAATTTTGCAAAAAAATCATTTTGAAAAAAATTCTAATGTTTGCCAACCACTAAAAATGACTTATTAGAAAATGAGATTGAGAAATAAACTTTTTTGAGAGAAACACTTGAAACCAACTTTTCTAAAAAGAGTCAGTATACAATAACTTGTGTACAAAAACACTTGTGAAGAGATGTAACCAAACATATAAGTGTTTAAATTCTAAACAATTTCTATACAAAATGTTTTTTAAAAAATGCATTCTTGAAAAACATTTAAATTAAAATGTATTCCAAACGGACCCTAAATGTTTATCAATAATGCATTTTCTTTTAAACACTTTGTATAAAAATGATTAAGGGGGTGTTTGGGGCACTGAATAGGTTATAATAACCCCCTTTATTATAACTTATTCAATGTTTGGGGCACCAACAAAAATAAATGGTGATGTGGGTTATTTTTACCCCAATTATTTTATCCATTCTCTACAGTAATCATCATTCAACCCACCCGATTATTCTATCCATTTTCTACAGTAACTCTCTCATCTCTTCTTCCATGCGACTCCTTGACTTTTCCGACGACCGCCGGCTGCCGTCGACCGACGAAGTTTCCGGCGACTTTTCCAACGACTGTCGACGACTTTTCCGGCCACCGATTTTTTTTTTCTTTTTTTCATATTTCTTCTCATTTTCATTTTGAAAAATATAAAAAATAAAAATAAAGAAACAAACATCGAAGGTTGCCGGAAAAGTAGTTGACAACATCGAAGGTTAACCAACTTAAAAAAAAAAAAAAAGAACATTCAAACGAAATTGTATTTACCACACTCAAGTTTATTTCAAATGATTTTATTGATAAAAAAAAAAACTAATATGATTTTTGAACTAAACATTTACAATTTTTATTTTGGCAATACTAAAAGTTAACTGATATGATTTTTCTATACCAAATCCTAAACTTTTTTGTTTTGTAAAAAAAAAAAAAAACATAACCCTAAATCAAAGTGAATTGTATATCATTAAAAATAAAAAAAAAATAAAAAAAAAAACTAGAAAAAGAAAACAGTCAGTTTGAACCTTTGATTCAGAATCCCATGTTAAAACAGATCAACACTCCAAACACAAACTATTTTATCCCAGACTAAAATAATCTGCATCACAAACACATATTATTTTATCCCAGACTAAACTAATCTGCACCCCAAACACAGATTATTTTATCCCAGACTATAATAATCTGCACCCTCAAACACAGATTATTATAACCCCCAGACTATTATAATTCCCAGATTATTATAACCACCAGATATTATAACCAATTCAGCGCCCCTGTTTGGGCCCCCGAATGGGTTATAATAGCATGGGCTATTATATCCCACACGCTGTTTGGGAGCCCAATTATTTTAAACGCCGAGAATGGGAAAGGAAAACGGCGTTTACCAACAGTGTTCATTATTCATCTTCCTTGGTTTTCCTTACACGATACGCACAATAAATCTCTCTCTCCCTCTTTCTTTCTCTCAGCAAGCTCTCCCCCTGTGCGATCTAGGGTTTTTGCCGCCGATTCCCCCTAACCACCGTCTTCTCCGTCACCCTCTTGTTCTATCAAGTCGATCTCTTTGTCTCTCTTGTCTATCGACTTATTCTTCTCTCAGCCGTAACGATTTCCCTTCTTCCATCGTGTGGTTCGTTTCGATTCACCAGATCTGAAACGATCTTTCACGATCCCCTCGCCGCTCCGAATTGGGTTCCCGCTCTTGTCGCATTCCTTCGTCTATTTGATGTTGCATGTTGCCTTCCATTCTTTGGACTTTGGATTTGCGTGGTAGGAGACGACTGGAGTCCATTCGAGCCTGGTGGGGGGGTTCTTCGAGGTTTGTTTTCTATCCTTAATGGCCGGCCGATGATGAATGCCTTCGTGCTCTGTGTCTGATCTAATTTTTTTTTTCATTCGTGGTCTCTTTGGTATCTGATTTAAGAATGTATTCTATGTTTGTTTTTTTTTCCCCACAATTGTTGTCTGATTCAGTCTTTTCTGTGTTGTTCGAGATTTTGTTCTTCCATTTTTTTTTTTCCATTCTCACTTTCTCTGGTATCTGATTTAATATTATGTTACATGGTTTGTTTTTCCTATTTTTTGTTCATAACCCTTGTCTGAAACCTTATATGTGCTGTTCGAGAATGTGTTCTTCTGTTTTCTCTCCTTTTTTTTTTCATTCTCGCTCTTTTTGTTATCTGATTAAATGATGTGTTCGAAGGTTTGATTTATCCTTTTTTTTTTCTGTAATCACTGTCTGATTCAACATTGTCTATGTTGTTAGAGAATGTGTTCTTACTTTTCTGTGTCATTGGAGTCGATGATAGGTTATATTTCTTTTATTTTTTGCATAATGGTTCTCTGATTCATGAGCAATAAAATTAGATCTTCTTGTTGCTTATGTATGTTCACCATGACTTTGTGATACAAATGTCCTCTTTTGCACATCTAAGTCGAAGTCCCTGCCCTCCCTGTCTGCATACAACTGTTCTGTTTTCTTTTCCTCTTGTCCATATTTTTTCTCTGATTCACAGTCTGTGATGTTCGAGAATGTGTTCTTACTTTTCTGTTCATTGTAGTCGATGATAGGTTATATTTCTTTTCTTTTTTGCATAATGGTTCTCTGATTCATGAGCAATAAAATTAGATCTTCTTGCTGCTTATGTATGTTGACCATGATTTTGTGATACAAATGTCCTCTTTTGCACATCTAAGTGGAAGTCCCTGCCCTCCCTGTCTGCATACAATTGTTCTATTTTATTTTCCTCTTCTCCATATTTTTCTCTGATTCACAGTCATACTTGTGATCTCTGTTTCTGTGTTCAAACATTCTACATGAAATTCAATACACATGAATGAATTTCAAATACCTGAGGCCGGCCACCTTTTCCACTCTATGCATTAACATAATATTTTCCCCATCTGCACTTCATAAATGCGTTTGTTGAGTTGACATTGGCTTATTGGTAATAAATGTATATCTAATACACTGTTGAGTTGACATTTGATTTTTAAAAAATGATGATTGCTTAACACAAATTCATGGTTTATTCAATGGGGATTTGACATTATTCAACACCCCTTTACCCACTATTGGAATGTTGGTTGGGTGCAATAAGTGCACAAACCAACATTGAAACCTACACTAGCATTCTTCTTTCTATATATATACATGTGCCATACTTTGTTCTTCAGGCAGCCCCATCTCATTCTTCTCTTCCTCTATTTACAATTGGGTTAGTCTCCTCTCTCTACCTCCATTTTTCTCAACTACTTCATACACAGTCTTTTGCTTAATACTAATGAACTATTCTCTTGCAATAGGGGTGGACTCCTTCGTGGAAGGAAACTTGTTTTCTTCACATACTCTATTTCCACATCTCCTCCTAGTAAGGTTAGTCTCGTTGTTCTTTTTGTATTGGGTAGTTGATAACAAGGTTGTAATATTCATCGTTTATTGTTTTTAGGTTTTGGAAAACATATATTCATCGACCTTACTTTGAGGTTCGTTTTATTAAAGATCGAATGTTGCTTATGTAATTAATTTATTTTACACAATTTCTTTGTTCATGTATATTCATAATTTATTTTACACAACTTTTTTTGTTAGTGTATATTGATTGTATGTGAATTTTTATTCGTATTCTATGTAGGACATTGTATATTAAACTTGTTGAACGTGTGCGAAATCATAACATGAGATGGTGTTTTTATTATATTTGGACATCGTTTTTAATGTTTGTTTCATGGATGTTTTTTTTTTTTTTTTTTTTGTTTAGAAGATTGTTTCAAAAAGACTTCATTCTGAACATTGCTTGAAAACTATGTAAATTTTAAAAACATAATATTTTTTAGAAAATAAAATTGGTTAAAAATAAAATTTGTTATAGAACAAACAATACGTTAAAAATAGAATATGTTTTAGGAAAAACAATTCGTTAAAAATAGAATCTGTTTTAGAAAATACACTCGGTTAAAATTAGAATCATATAAAAAACAATTCGTTAAAAAAAGAATCTGTCTTAGAAATAAAATTTAAACCGAATAAGTTTTAGAAAAAACAAAGCTTGTTAAAAATAAAATCTATTTAAAAAAAAACAATTTCTTAAAAAACAGACTATTTTAGGAAAAACAATTAGTTAGGAAGAGAATCTATTTTAAGAAAAACAATTTGTTAAAAAGAGAATTCGTTTTAGAAAAAACAAATCTTTAAAAATATAATGTTTTATAAAAAATAGTTTGTGCAAAATAGTAAGTAAATACATTGTTAGAATTTGAGATGTCTTTGATAAAAATGAAAACCATAGTAAGTAAATAAAGAAAAAAAATCAGATGGTTATCCAATTTGACCTTATTTTTTCATTGTTAAAAAAAAATTCATAAATGTTGAACACAATTTAAAAATGATTTTATTTACGGTTTTAAAATGGGTTACAAAATTAAGAATGTATGAACATGATCTGCAGGAAAAAAAAATTGTTATGGTTTTCGCCTTAAAATATTTATTATCAACCTACACGAATTATATTTCATTGCAATGATTTCAATATACTAATCCTTTCTTAATTTTTATTTTATGAGTAAAATAGTCCATTCGAACGTAATTTAACCGGTTAAAGTATTATACTATCCAAAAAAGAAAAAAAAAAAAACAAATTCACACCCTATGATATTGAACTTAAAAAAAAATCAAACATAAGTTTGGGAGGAGTTTTTTTTTTTTCCCTCACTTTTGTGTTATTTAAAGAGGAATAGAACCAAACAAAAAATAAAAGGTGTTAATAAAAGTGTGTCAATTAAAAAAACTCACTTCCACAATCAGTTTCTTGAAACGCATGTTTTGTGTTATTTCGATATATTTTATCTCTAAAATCAAAAGTTTGAAACAAAAAAAGGTCTCAATTTTCCTTAACAAATTAATATCCTTTTAAGCCGCATTTGAATCTTGATTTATTTAATTAAACAATACCTTCGTCCATGATGATTTTTTTTCTCCTATGTAGAACTCCTAGTGTAATTATGGATCCTAATGAACTAGATCCCGATGAACTAGTGGCCATATTGACAGCCTTCACCGCAGCTCAAACTACAATTCTCCTACTATTAGATTTATATATGAACGACCATAGGAGAATAGAACACCAATCACCCTACATCCGACACCACATTAGGCAACTAGCATTCTTCAGGCTTATACACGAGTCTGACTTACGTTGTCGGGAGAGTACAAGGATGGACAGAAGATGTTTTGCCATACTTTGCACCTTATTAAAAACAGTTGCCGGTTTATCCAGTACGGAGGTCGTAGATGTAGAAGAGATGGTTGCCATGTTCTCGCACATTGTAGCCCACGACGTTAAGAACCGAGTAGTTCGTACGCAGTTCGCTAGGTCTGGTGAGACAATTTCTAGGCATTTCAACACCGTCCTTCATGCGGTGTTACGATTGCATGATGTTCTCTTAAAAAAACCTGAGCCAGTCACAGCCTCTTGTACGGATCCAAGGTGGAAATGGTTTCAGGTATAGATAATTAATCATCCAACTTTAGTTAAGCCTAGACTCACTTCTTAGGGTTAGAACCGTGAACCAAATTTGCCTCTATTATGTGGACGCAGAATTGCCTCGGTGCGTTAGATGGAACATACATCAAGGTGAATGTTGCTGTTGTCGATCGCCCGAGGTATAGAACAAGGAAAGGTGAAATTGCAACGAACGTGCTTGCTGTCTGTGATACAAAAGGAGACTTCACATTCGTCTTACCAGGGTGGGAAGGGTCTGCCGCTGATTCCCGGGTTCTTAGAGATGCAATATCAAGACCAAACAGACTCACAGTTCCGAAGGGTAAATAATCAGATCTTTTTTCCTTTCACCGTAGAACCCTTAGGAAGGTGTATTGAGCCAATATCACATTCCACAGGCTATTATTATCTGTGCGATGCTGGGTACCCTAACGCAGAGGGTTTCCTGGCACCGTATAGAGGGGAACGTTACCACCTCTCTGAATGGCGTGGTGCGGGGAATGCACCAACTACTCCAAAAGAATTCTTTAACATGAAGCATTCATCTGCGAGGAACGTGATTGAGAGGGCATTTGGTTTGTTGAAAGGAAGGTGGGCTATCCTCCGAGGGAAATCCTACTATCCAGTTCGAATTCAAGGGCGGACCATCGCAGCATGCTGCTTACTTCACAATCTTATTAATAGAGAGATGGGTGACCGTGAAATTCCTGATGAGATGGATGAGGTGGATTCTGCTTCTATTACAACTGATGGTGAGAATATCAATTTCATTGAGACTTCCGACGAATGGAGCCGGTGGAGGGATGAGTTGGCAACACAGATGTTTTCGAATTGGGAGTTACGTAATAGCTAA

mRNA sequence

ATGGGGGAATCGATTGTTATTTATAGAAACTGGACGTTTGGCTGCGGAGCCACCGCGTTCACCCTAACCATGGGTTTTTGCCGCCGATTCCCCCTAACCACCGTCTTCTCCGTCACCCTCTTGTTCTATCAAGTCGATCTCTTTGTCTCTCTTGTCTATCGACTTATTCTTCTCTCAGCCGTAACGATTTCCCTTCTTCCATCGTGTGGTTCGTTTCGATTCACCAGATCTGAAACGATCTTTCACGATCCCCTCGCCGCTCCGAATTGGGTTCCCGCTCTTGTCGCATTCCTTCGTCTATTTGATGTTGCATGTTGCCTTCCATTCTTTGGACTTTGGATTTGCGTGGTAGGAGACGACTGGAGTCCATTCGAGCCTGGTGGGGGGGTTCTTCGAGGGGTGGACTCCTTCGTGGAAGGAAACTTGTTTTCTTCACATACTCTATTTCCACATCTCCTCCTAGTAAGAACTCCTAGTGTAATTATGGATCCTAATGAACTAGATCCCGATGAACTAGTGGCCATATTGACAGCCTTCACCGCAGCTCAAACTACAATTCTCCTACTATTAGATTTATATATGAACGACCATAGGAGAATAGAACACCAATCACCCTACATCCGACACCACATTAGGCAACTAGCATTCTTCAGGCTTATACACGAGTCTGACTTACGTTGTCGGGAGAGTACAAGGATGGACAGAAGATGTTTTGCCATACTTTGCACCTTATTAAAAACAGTTGCCGGTTTATCCAGTACGGAGGTCGTAGATGTAGAAGAGATGGTTGCCATGTTCTCGCACATTGTAGCCCACGACGTTAAGAACCGAGTAGTTCGTACGCAGTTCGCTAGGTCTGGTGAGACAATTTCTAGGCATTTCAACACCGTCCTTCATGCGGTGTTACGATTGCATGATGTTCTCTTAAAAAAACCTGAGCCAGTCACAGCCTCTTGTACGGATCCAAGGTGGAAATGGTTTCAGAATTGCCTCGGTGCGTTAGATGGAACATACATCAAGGTGAATGTTGCTGTTGTCGATCGCCCGAGGTATAGAACAAGGAAAGGTGAAATTGCAACGAACGTGCTTGCTGTCTGTGATACAAAAGGAGACTTCACATTCGTCTTACCAGGGTGGGAAGGGTCTGCCGCTGATTCCCGGGTTCTTAGAGATGCAATATCAAGACCAAACAGACTCACAGTTCCGAAGGGCTATTATTATCTGTGCGATGCTGGGTACCCTAACGCAGAGGGTTTCCTGGCACCGTATAGAGGGGAACGTTACCACCTCTCTGAATGGCGTGGTGCGGGGAATGCACCAACTACTCCAAAAGAATTCTTTAACATGAAGCATTCATCTGCGAGGAACGTGATTGAGAGGGCATTTGGTTTGTTGAAAGGAAGGTGGGCTATCCTCCGAGGGAAATCCTACTATCCAGTTCGAATTCAAGGGCGGACCATCGCAGCATGCTGCTTACTTCACAATCTTATTAATAGAGAGATGGGTGACCGTGAAATTCCTGATGAGATGGATGAGGTGGATTCTGCTTCTATTACAACTGATGGTGAGAATATCAATTTCATTGAGACTTCCGACGAATGGAGCCGGTGGAGGGATGAGTTGGCAACACAGATGTTTTCGAATTGGGAGTTACGTAATAGCTAA

Coding sequence (CDS)

ATGGGGGAATCGATTGTTATTTATAGAAACTGGACGTTTGGCTGCGGAGCCACCGCGTTCACCCTAACCATGGGTTTTTGCCGCCGATTCCCCCTAACCACCGTCTTCTCCGTCACCCTCTTGTTCTATCAAGTCGATCTCTTTGTCTCTCTTGTCTATCGACTTATTCTTCTCTCAGCCGTAACGATTTCCCTTCTTCCATCGTGTGGTTCGTTTCGATTCACCAGATCTGAAACGATCTTTCACGATCCCCTCGCCGCTCCGAATTGGGTTCCCGCTCTTGTCGCATTCCTTCGTCTATTTGATGTTGCATGTTGCCTTCCATTCTTTGGACTTTGGATTTGCGTGGTAGGAGACGACTGGAGTCCATTCGAGCCTGGTGGGGGGGTTCTTCGAGGGGTGGACTCCTTCGTGGAAGGAAACTTGTTTTCTTCACATACTCTATTTCCACATCTCCTCCTAGTAAGAACTCCTAGTGTAATTATGGATCCTAATGAACTAGATCCCGATGAACTAGTGGCCATATTGACAGCCTTCACCGCAGCTCAAACTACAATTCTCCTACTATTAGATTTATATATGAACGACCATAGGAGAATAGAACACCAATCACCCTACATCCGACACCACATTAGGCAACTAGCATTCTTCAGGCTTATACACGAGTCTGACTTACGTTGTCGGGAGAGTACAAGGATGGACAGAAGATGTTTTGCCATACTTTGCACCTTATTAAAAACAGTTGCCGGTTTATCCAGTACGGAGGTCGTAGATGTAGAAGAGATGGTTGCCATGTTCTCGCACATTGTAGCCCACGACGTTAAGAACCGAGTAGTTCGTACGCAGTTCGCTAGGTCTGGTGAGACAATTTCTAGGCATTTCAACACCGTCCTTCATGCGGTGTTACGATTGCATGATGTTCTCTTAAAAAAACCTGAGCCAGTCACAGCCTCTTGTACGGATCCAAGGTGGAAATGGTTTCAGAATTGCCTCGGTGCGTTAGATGGAACATACATCAAGGTGAATGTTGCTGTTGTCGATCGCCCGAGGTATAGAACAAGGAAAGGTGAAATTGCAACGAACGTGCTTGCTGTCTGTGATACAAAAGGAGACTTCACATTCGTCTTACCAGGGTGGGAAGGGTCTGCCGCTGATTCCCGGGTTCTTAGAGATGCAATATCAAGACCAAACAGACTCACAGTTCCGAAGGGCTATTATTATCTGTGCGATGCTGGGTACCCTAACGCAGAGGGTTTCCTGGCACCGTATAGAGGGGAACGTTACCACCTCTCTGAATGGCGTGGTGCGGGGAATGCACCAACTACTCCAAAAGAATTCTTTAACATGAAGCATTCATCTGCGAGGAACGTGATTGAGAGGGCATTTGGTTTGTTGAAAGGAAGGTGGGCTATCCTCCGAGGGAAATCCTACTATCCAGTTCGAATTCAAGGGCGGACCATCGCAGCATGCTGCTTACTTCACAATCTTATTAATAGAGAGATGGGTGACCGTGAAATTCCTGATGAGATGGATGAGGTGGATTCTGCTTCTATTACAACTGATGGTGAGAATATCAATTTCATTGAGACTTCCGACGAATGGAGCCGGTGGAGGGATGAGTTGGCAACACAGATGTTTTCGAATTGGGAGTTACGTAATAGCTAA

Protein sequence

MGESIVIYRNWTFGCGATAFTLTMGFCRRFPLTTVFSVTLLFYQVDLFVSLVYRLILLSAVTISLLPSCGSFRFTRSETIFHDPLAAPNWVPALVAFLRLFDVACCLPFFGLWICVVGDDWSPFEPGGGVLRGVDSFVEGNLFSSHTLFPHLLLVRTPSVIMDPNELDPDELVAILTAFTAAQTTILLLLDLYMNDHRRIEHQSPYIRHHIRQLAFFRLIHESDLRCRESTRMDRRCFAILCTLLKTVAGLSSTEVVDVEEMVAMFSHIVAHDVKNRVVRTQFARSGETISRHFNTVLHAVLRLHDVLLKKPEPVTASCTDPRWKWFQNCLGALDGTYIKVNVAVVDRPRYRTRKGEIATNVLAVCDTKGDFTFVLPGWEGSAADSRVLRDAISRPNRLTVPKGYYYLCDAGYPNAEGFLAPYRGERYHLSEWRGAGNAPTTPKEFFNMKHSSARNVIERAFGLLKGRWAILRGKSYYPVRIQGRTIAACCLLHNLINREMGDREIPDEMDEVDSASITTDGENINFIETSDEWSRWRDELATQMFSNWELRNS

Homology

[Close]

BLAST of Lcy09g019730 vs. ExPASy TrEMBL
Match: A0A5A7TXW1 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G00370 PE=3 SV=1)

HSP 1 Score: 605.1 bits (1559), Expect = 2.9e-169
Identity = 288/387 (74.42%), Postives = 329/387 (85.01%), Query Frame = 0


Query: 167 LDPDELVAILTAFTAAQTTILLLLDLYMNDHRRIEHQSPYIRHHIRQLAFFRLIHESDLR 226
           +D  EL +I+ AF A+Q  +LL+L+L  ND +RI H     RH IRQLA+FR+IH SDL 
Sbjct: 1   MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLV 60

Query: 227 CRESTRMDRRCFAILCTLLKTVAGLSSTEVVDVEEMVAMFSHIVAHDVKNRVVRTQFARS 286
           CR+STRMDRRCFAILC LL+T+AGL+STEVVDVEEMVAMF HI+AHDVKNRV++ +F RS
Sbjct: 61  CRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRS 120

Query: 287 GETISRHFNTVLHAVLRLHDVLLKKPEPVTASCTDPRWKWFQNCLGALDGTYIKVNVAVV 346
           GETISRHFN VL AV+RLHD LLKKP+PV   CTD RW+WF+NCLGALDGTYIKVNV   
Sbjct: 121 GETISRHFNMVLLAVIRLHDELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPAS 180

Query: 347 DRPRYRTRKGEIATNVLAVCDTKGDFTFVLPGWEGSAADSRVLRDAISRPNRLTVPKGYY 406
           DR RYRTRKGE+ATNVL VCDTKGDF +VL GWEGSAADSR+LRDA+SRPNRL VPKGYY
Sbjct: 181 DRARYRTRKGEVATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDALSRPNRLKVPKGYY 240

Query: 407 YLCDAGYPNAEGFLAPYRGERYHLSEWRGAGNAPTTPKEFFNMKHSSARNVIERAFGLLK 466
           YL DAGYPNAEGFLAPYRG+RYHL EWRG  NAP+T KEFFNMKHSSARNVIERAFG+LK
Sbjct: 241 YLVDAGYPNAEGFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLK 300

Query: 467 GRWAILRGKSYYPVRIQGRTIAACCLLHNLINREMGDREIPDEMDEVDSASITTDGENIN 526
           GRWAILRGKSYYPV +Q RTI ACCLLHNLINREM + +I D +DEVDS   TT  ++I+
Sbjct: 301 GRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIH 360

Query: 527 FIETSDEWSRWRDELATQMFSNWELRN 554
           +IETS+EWS+WRD LA +MF+ WELRN
Sbjct: 361 YIETSNEWSQWRDNLAEEMFTEWELRN 387

[Close]

BLAST of Lcy09g019730 vs. ExPASy TrEMBL
Match: A0A5D3BDX0 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1112G00360 PE=3 SV=1)

HSP 1 Score: 603.6 bits (1555), Expect = 8.3e-169
Identity = 287/387 (74.16%), Postives = 329/387 (85.01%), Query Frame = 0


Query: 167 LDPDELVAILTAFTAAQTTILLLLDLYMNDHRRIEHQSPYIRHHIRQLAFFRLIHESDLR 226
           +D  EL +I+ AF A+Q  +LL+L+L  ND +RI H     RH IRQLA+FR+IH SDL 
Sbjct: 1   MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLV 60

Query: 227 CRESTRMDRRCFAILCTLLKTVAGLSSTEVVDVEEMVAMFSHIVAHDVKNRVVRTQFARS 286
           CR+STRMDRRCFAILC LL+T+AGL+STEVVDVEEMVAMF HI+AHDVKNRV++ +F RS
Sbjct: 61  CRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRS 120

Query: 287 GETISRHFNTVLHAVLRLHDVLLKKPEPVTASCTDPRWKWFQNCLGALDGTYIKVNVAVV 346
           GETISRHFN VL AV+RLH+ LLKKP+PV   CTD RW+WF+NCLGALDGTYIKVNV   
Sbjct: 121 GETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPAS 180

Query: 347 DRPRYRTRKGEIATNVLAVCDTKGDFTFVLPGWEGSAADSRVLRDAISRPNRLTVPKGYY 406
           DR RYRTRKGE+ATNVL VCDTKGDF +VL GWEGSAADSR+LRDA+SRPNRL VPKGYY
Sbjct: 181 DRARYRTRKGEVATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDALSRPNRLKVPKGYY 240

Query: 407 YLCDAGYPNAEGFLAPYRGERYHLSEWRGAGNAPTTPKEFFNMKHSSARNVIERAFGLLK 466
           YL DAGYPNAEGFLAPYRG+RYHL EWRG  NAP+T KEFFNMKHSSARNVIERAFG+LK
Sbjct: 241 YLVDAGYPNAEGFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLK 300

Query: 467 GRWAILRGKSYYPVRIQGRTIAACCLLHNLINREMGDREIPDEMDEVDSASITTDGENIN 526
           GRWAILRGKSYYPV +Q RTI ACCLLHNLINREM + +I D +DEVDS   TT  ++I+
Sbjct: 301 GRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIH 360

Query: 527 FIETSDEWSRWRDELATQMFSNWELRN 554
           +IETS+EWS+WRD LA +MF+ WELRN
Sbjct: 361 YIETSNEWSQWRDNLAEEMFTEWELRN 387

[Close]

BLAST of Lcy09g019730 vs. ExPASy TrEMBL
Match: A0A5A7U476 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G00800 PE=3 SV=1)

HSP 1 Score: 599.4 bits (1544), Expect = 1.6e-167
Identity = 286/387 (73.90%), Postives = 327/387 (84.50%), Query Frame = 0


Query: 167 LDPDELVAILTAFTAAQTTILLLLDLYMNDHRRIEHQSPYIRHHIRQLAFFRLIHESDLR 226
           +D  EL +I+ AF A+Q  +LL+L+L  ND +RI H     RH IRQLA+FR+IH SDL 
Sbjct: 1   MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLV 60

Query: 227 CRESTRMDRRCFAILCTLLKTVAGLSSTEVVDVEEMVAMFSHIVAHDVKNRVVRTQFARS 286
           CR+STRMDRRCFAILC LL+T+AGL+STEVVDVEEMVAMF HI+AHDVKNRV++ +F RS
Sbjct: 61  CRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRS 120

Query: 287 GETISRHFNTVLHAVLRLHDVLLKKPEPVTASCTDPRWKWFQNCLGALDGTYIKVNVAVV 346
           GETISRHFN VL AV+RLH+ LLKKP+PV   CTD RWKWF+NCLGALDGTYIKVNV   
Sbjct: 121 GETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWKWFENCLGALDGTYIKVNVPAS 180

Query: 347 DRPRYRTRKGEIATNVLAVCDTKGDFTFVLPGWEGSAADSRVLRDAISRPNRLTVPKGYY 406
           DR RYRTRKGE+ATNVL VCDTKGDF +VL GWEG AADSR+LRDA+SRPNRL VPKGYY
Sbjct: 181 DRARYRTRKGEVATNVLGVCDTKGDFVYVLAGWEGLAADSRILRDALSRPNRLKVPKGYY 240

Query: 407 YLCDAGYPNAEGFLAPYRGERYHLSEWRGAGNAPTTPKEFFNMKHSSARNVIERAFGLLK 466
           YL DAGY NAEGFLAPYRG+RYHL EWRG  NAP+T KEFFNMKHSSARNVIERAFG+LK
Sbjct: 241 YLVDAGYQNAEGFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLK 300

Query: 467 GRWAILRGKSYYPVRIQGRTIAACCLLHNLINREMGDREIPDEMDEVDSASITTDGENIN 526
           GRWAILRGKSYYPV +Q RTI ACCLLHNLINREM + +I D +DEVDS   TT  ++I+
Sbjct: 301 GRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIH 360

Query: 527 FIETSDEWSRWRDELATQMFSNWELRN 554
           +IETS+EWS+WRD LA +MF+ WELRN
Sbjct: 361 YIETSNEWSQWRDNLAEEMFTEWELRN 387

[Close]

BLAST of Lcy09g019730 vs. ExPASy TrEMBL
Match: A0A5A7U9H2 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold678G00110 PE=3 SV=1)

HSP 1 Score: 598.2 bits (1541), Expect = 3.5e-167
Identity = 284/387 (73.39%), Postives = 326/387 (84.24%), Query Frame = 0


Query: 167 LDPDELVAILTAFTAAQTTILLLLDLYMNDHRRIEHQSPYIRHHIRQLAFFRLIHESDLR 226
           +D  EL +I+ AF A+Q  +LL+L+L  ND +RI H     RH IRQLA+FR+IH SDL 
Sbjct: 1   MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLV 60

Query: 227 CRESTRMDRRCFAILCTLLKTVAGLSSTEVVDVEEMVAMFSHIVAHDVKNRVVRTQFARS 286
           C +STRMDRRCFAILC LL+T+AGL+STEVVDVEEMVAMF HI+ HDVKNRV++ +F RS
Sbjct: 61  CHQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILVHDVKNRVIQREFMRS 120

Query: 287 GETISRHFNTVLHAVLRLHDVLLKKPEPVTASCTDPRWKWFQNCLGALDGTYIKVNVAVV 346
           GETISRHFN VL AV+RLH+ LLKKP+PV   CTD RW+WF+NCLGALDGTYIKVNV   
Sbjct: 121 GETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPAS 180

Query: 347 DRPRYRTRKGEIATNVLAVCDTKGDFTFVLPGWEGSAADSRVLRDAISRPNRLTVPKGYY 406
           DR RYRTRKGE+ATNVL VCDTKGDF +VL GWEGSAADSR+LRDA+SRPNRL VPKGYY
Sbjct: 181 DRARYRTRKGEVATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDALSRPNRLKVPKGYY 240

Query: 407 YLCDAGYPNAEGFLAPYRGERYHLSEWRGAGNAPTTPKEFFNMKHSSARNVIERAFGLLK 466
           YL DAGYPNAEGFLAPYRG+RYHL EWRG  NAP+T KEFFNMKHS ARNVIERAFG+LK
Sbjct: 241 YLVDAGYPNAEGFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSFARNVIERAFGVLK 300

Query: 467 GRWAILRGKSYYPVRIQGRTIAACCLLHNLINREMGDREIPDEMDEVDSASITTDGENIN 526
           GRWAILRGKSYYPV +Q RTI ACCLLHNLINREM + +I D +DEVDS   TT  ++I+
Sbjct: 301 GRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTTADDIH 360

Query: 527 FIETSDEWSRWRDELATQMFSNWELRN 554
           +IETS+EWS+WRD LA +MF+ WELRN
Sbjct: 361 YIETSNEWSQWRDNLAEEMFTEWELRN 387

[Close]

BLAST of Lcy09g019730 vs. ExPASy TrEMBL
Match: A0A5A7VHB0 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold37G00240 PE=3 SV=1)

HSP 1 Score: 594.7 bits (1532), Expect = 3.9e-166
Identity = 281/387 (72.61%), Postives = 326/387 (84.24%), Query Frame = 0


Query: 167 LDPDELVAILTAFTAAQTTILLLLDLYMNDHRRIEHQSPYIRHHIRQLAFFRLIHESDLR 226
           +D  EL +I+ AF A+Q  +LL+L+L  ND +RI H     RH IRQLA+FR+IHESDL 
Sbjct: 1   MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHESDLV 60

Query: 227 CRESTRMDRRCFAILCTLLKTVAGLSSTEVVDVEEMVAMFSHIVAHDVKNRVVRTQFARS 286
           CR+STRMDRRCFAILC LL+T+AGL+STEVVDVEEMVAMF HI+AHDVKNRV++ +F RS
Sbjct: 61  CRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRS 120

Query: 287 GETISRHFNTVLHAVLRLHDVLLKKPEPVTASCTDPRWKWFQNCLGALDGTYIKVNVAVV 346
           GETI RHFN +  AV+RLHD LLKKP+PV   CTD RW+WF+NCLGALDGTYIKVNV   
Sbjct: 121 GETIFRHFNMIFLAVIRLHDELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPAS 180

Query: 347 DRPRYRTRKGEIATNVLAVCDTKGDFTFVLPGWEGSAADSRVLRDAISRPNRLTVPKGYY 406
           D+ RYRTRKGE+ATNVL VCDTKGDF +VL GWEGSAADSR+LRDA+SRPNRL VPKGYY
Sbjct: 181 DQARYRTRKGEVATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDALSRPNRLKVPKGYY 240

Query: 407 YLCDAGYPNAEGFLAPYRGERYHLSEWRGAGNAPTTPKEFFNMKHSSARNVIERAFGLLK 466
           YL D GYPN EGFLAPYRG+RYHL EWR   NAP+T KEFFNMKHSSARNVIERAFG+LK
Sbjct: 241 YLVDVGYPNVEGFLAPYRGQRYHLQEWRDPENAPSTSKEFFNMKHSSARNVIERAFGVLK 300

Query: 467 GRWAILRGKSYYPVRIQGRTIAACCLLHNLINREMGDREIPDEMDEVDSASITTDGENIN 526
           GRWAILRGKSYYPV +Q RTI ACCLL+NLINREM + +I D +DEVDS   TT  ++I+
Sbjct: 301 GRWAILRGKSYYPVEVQCRTILACCLLYNLINREMTNFDIEDNIDEVDSTHATTAADDIH 360

Query: 527 FIETSDEWSRWRDELATQMFSNWELRN 554
           +IETS+EWS+WRD+LA +MF+ WELRN
Sbjct: 361 YIETSNEWSQWRDDLAEEMFTEWELRN 387

[Close]

BLAST of Lcy09g019730 vs. NCBI nr
Match: KAA0046727.1 (retrotransposon protein [Cucumis melo var. makuwa] >KAA0052100.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0056032.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0059561.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0065497.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 605.1 bits (1559), Expect = 5.9e-169
Identity = 288/387 (74.42%), Postives = 329/387 (85.01%), Query Frame = 0


Query: 167 LDPDELVAILTAFTAAQTTILLLLDLYMNDHRRIEHQSPYIRHHIRQLAFFRLIHESDLR 226
           +D  EL +I+ AF A+Q  +LL+L+L  ND +RI H     RH IRQLA+FR+IH SDL 
Sbjct: 1   MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLV 60

Query: 227 CRESTRMDRRCFAILCTLLKTVAGLSSTEVVDVEEMVAMFSHIVAHDVKNRVVRTQFARS 286
           CR+STRMDRRCFAILC LL+T+AGL+STEVVDVEEMVAMF HI+AHDVKNRV++ +F RS
Sbjct: 61  CRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRS 120

Query: 287 GETISRHFNTVLHAVLRLHDVLLKKPEPVTASCTDPRWKWFQNCLGALDGTYIKVNVAVV 346
           GETISRHFN VL AV+RLHD LLKKP+PV   CTD RW+WF+NCLGALDGTYIKVNV   
Sbjct: 121 GETISRHFNMVLLAVIRLHDELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPAS 180

Query: 347 DRPRYRTRKGEIATNVLAVCDTKGDFTFVLPGWEGSAADSRVLRDAISRPNRLTVPKGYY 406
           DR RYRTRKGE+ATNVL VCDTKGDF +VL GWEGSAADSR+LRDA+SRPNRL VPKGYY
Sbjct: 181 DRARYRTRKGEVATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDALSRPNRLKVPKGYY 240

Query: 407 YLCDAGYPNAEGFLAPYRGERYHLSEWRGAGNAPTTPKEFFNMKHSSARNVIERAFGLLK 466
           YL DAGYPNAEGFLAPYRG+RYHL EWRG  NAP+T KEFFNMKHSSARNVIERAFG+LK
Sbjct: 241 YLVDAGYPNAEGFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLK 300

Query: 467 GRWAILRGKSYYPVRIQGRTIAACCLLHNLINREMGDREIPDEMDEVDSASITTDGENIN 526
           GRWAILRGKSYYPV +Q RTI ACCLLHNLINREM + +I D +DEVDS   TT  ++I+
Sbjct: 301 GRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIH 360

Query: 527 FIETSDEWSRWRDELATQMFSNWELRN 554
           +IETS+EWS+WRD LA +MF+ WELRN
Sbjct: 361 YIETSNEWSQWRDNLAEEMFTEWELRN 387

[Close]

BLAST of Lcy09g019730 vs. NCBI nr
Match: KAA0035620.1 (retrotransposon protein [Cucumis melo var. makuwa] >KAA0038121.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0041646.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0047363.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0048378.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 603.6 bits (1555), Expect = 1.7e-168
Identity = 287/387 (74.16%), Postives = 329/387 (85.01%), Query Frame = 0


Query: 167 LDPDELVAILTAFTAAQTTILLLLDLYMNDHRRIEHQSPYIRHHIRQLAFFRLIHESDLR 226
           +D  EL +I+ AF A+Q  +LL+L+L  ND +RI H     RH IRQLA+FR+IH SDL 
Sbjct: 1   MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLV 60

Query: 227 CRESTRMDRRCFAILCTLLKTVAGLSSTEVVDVEEMVAMFSHIVAHDVKNRVVRTQFARS 286
           CR+STRMDRRCFAILC LL+T+AGL+STEVVDVEEMVAMF HI+AHDVKNRV++ +F RS
Sbjct: 61  CRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRS 120

Query: 287 GETISRHFNTVLHAVLRLHDVLLKKPEPVTASCTDPRWKWFQNCLGALDGTYIKVNVAVV 346
           GETISRHFN VL AV+RLH+ LLKKP+PV   CTD RW+WF+NCLGALDGTYIKVNV   
Sbjct: 121 GETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPAS 180

Query: 347 DRPRYRTRKGEIATNVLAVCDTKGDFTFVLPGWEGSAADSRVLRDAISRPNRLTVPKGYY 406
           DR RYRTRKGE+ATNVL VCDTKGDF +VL GWEGSAADSR+LRDA+SRPNRL VPKGYY
Sbjct: 181 DRARYRTRKGEVATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDALSRPNRLKVPKGYY 240

Query: 407 YLCDAGYPNAEGFLAPYRGERYHLSEWRGAGNAPTTPKEFFNMKHSSARNVIERAFGLLK 466
           YL DAGYPNAEGFLAPYRG+RYHL EWRG  NAP+T KEFFNMKHSSARNVIERAFG+LK
Sbjct: 241 YLVDAGYPNAEGFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLK 300

Query: 467 GRWAILRGKSYYPVRIQGRTIAACCLLHNLINREMGDREIPDEMDEVDSASITTDGENIN 526
           GRWAILRGKSYYPV +Q RTI ACCLLHNLINREM + +I D +DEVDS   TT  ++I+
Sbjct: 301 GRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIH 360

Query: 527 FIETSDEWSRWRDELATQMFSNWELRN 554
           +IETS+EWS+WRD LA +MF+ WELRN
Sbjct: 361 YIETSNEWSQWRDNLAEEMFTEWELRN 387

[Close]

BLAST of Lcy09g019730 vs. NCBI nr
Match: KAA0048361.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 599.4 bits (1544), Expect = 3.2e-167
Identity = 286/387 (73.90%), Postives = 327/387 (84.50%), Query Frame = 0


Query: 167 LDPDELVAILTAFTAAQTTILLLLDLYMNDHRRIEHQSPYIRHHIRQLAFFRLIHESDLR 226
           +D  EL +I+ AF A+Q  +LL+L+L  ND +RI H     RH IRQLA+FR+IH SDL 
Sbjct: 1   MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLV 60

Query: 227 CRESTRMDRRCFAILCTLLKTVAGLSSTEVVDVEEMVAMFSHIVAHDVKNRVVRTQFARS 286
           CR+STRMDRRCFAILC LL+T+AGL+STEVVDVEEMVAMF HI+AHDVKNRV++ +F RS
Sbjct: 61  CRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRS 120

Query: 287 GETISRHFNTVLHAVLRLHDVLLKKPEPVTASCTDPRWKWFQNCLGALDGTYIKVNVAVV 346
           GETISRHFN VL AV+RLH+ LLKKP+PV   CTD RWKWF+NCLGALDGTYIKVNV   
Sbjct: 121 GETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWKWFENCLGALDGTYIKVNVPAS 180

Query: 347 DRPRYRTRKGEIATNVLAVCDTKGDFTFVLPGWEGSAADSRVLRDAISRPNRLTVPKGYY 406
           DR RYRTRKGE+ATNVL VCDTKGDF +VL GWEG AADSR+LRDA+SRPNRL VPKGYY
Sbjct: 181 DRARYRTRKGEVATNVLGVCDTKGDFVYVLAGWEGLAADSRILRDALSRPNRLKVPKGYY 240

Query: 407 YLCDAGYPNAEGFLAPYRGERYHLSEWRGAGNAPTTPKEFFNMKHSSARNVIERAFGLLK 466
           YL DAGY NAEGFLAPYRG+RYHL EWRG  NAP+T KEFFNMKHSSARNVIERAFG+LK
Sbjct: 241 YLVDAGYQNAEGFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLK 300

Query: 467 GRWAILRGKSYYPVRIQGRTIAACCLLHNLINREMGDREIPDEMDEVDSASITTDGENIN 526
           GRWAILRGKSYYPV +Q RTI ACCLLHNLINREM + +I D +DEVDS   TT  ++I+
Sbjct: 301 GRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIH 360

Query: 527 FIETSDEWSRWRDELATQMFSNWELRN 554
           +IETS+EWS+WRD LA +MF+ WELRN
Sbjct: 361 YIETSNEWSQWRDNLAEEMFTEWELRN 387

[Close]

BLAST of Lcy09g019730 vs. NCBI nr
Match: KAA0051057.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 598.2 bits (1541), Expect = 7.2e-167
Identity = 284/387 (73.39%), Postives = 326/387 (84.24%), Query Frame = 0


Query: 167 LDPDELVAILTAFTAAQTTILLLLDLYMNDHRRIEHQSPYIRHHIRQLAFFRLIHESDLR 226
           +D  EL +I+ AF A+Q  +LL+L+L  ND +RI H     RH IRQLA+FR+IH SDL 
Sbjct: 1   MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLV 60

Query: 227 CRESTRMDRRCFAILCTLLKTVAGLSSTEVVDVEEMVAMFSHIVAHDVKNRVVRTQFARS 286
           C +STRMDRRCFAILC LL+T+AGL+STEVVDVEEMVAMF HI+ HDVKNRV++ +F RS
Sbjct: 61  CHQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILVHDVKNRVIQREFMRS 120

Query: 287 GETISRHFNTVLHAVLRLHDVLLKKPEPVTASCTDPRWKWFQNCLGALDGTYIKVNVAVV 346
           GETISRHFN VL AV+RLH+ LLKKP+PV   CTD RW+WF+NCLGALDGTYIKVNV   
Sbjct: 121 GETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPAS 180

Query: 347 DRPRYRTRKGEIATNVLAVCDTKGDFTFVLPGWEGSAADSRVLRDAISRPNRLTVPKGYY 406
           DR RYRTRKGE+ATNVL VCDTKGDF +VL GWEGSAADSR+LRDA+SRPNRL VPKGYY
Sbjct: 181 DRARYRTRKGEVATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDALSRPNRLKVPKGYY 240

Query: 407 YLCDAGYPNAEGFLAPYRGERYHLSEWRGAGNAPTTPKEFFNMKHSSARNVIERAFGLLK 466
           YL DAGYPNAEGFLAPYRG+RYHL EWRG  NAP+T KEFFNMKHS ARNVIERAFG+LK
Sbjct: 241 YLVDAGYPNAEGFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSFARNVIERAFGVLK 300

Query: 467 GRWAILRGKSYYPVRIQGRTIAACCLLHNLINREMGDREIPDEMDEVDSASITTDGENIN 526
           GRWAILRGKSYYPV +Q RTI ACCLLHNLINREM + +I D +DEVDS   TT  ++I+
Sbjct: 301 GRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTTADDIH 360

Query: 527 FIETSDEWSRWRDELATQMFSNWELRN 554
           +IETS+EWS+WRD LA +MF+ WELRN
Sbjct: 361 YIETSNEWSQWRDNLAEEMFTEWELRN 387

[Close]

BLAST of Lcy09g019730 vs. NCBI nr
Match: KAA0065736.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 594.7 bits (1532), Expect = 8.0e-166
Identity = 281/387 (72.61%), Postives = 326/387 (84.24%), Query Frame = 0


Query: 167 LDPDELVAILTAFTAAQTTILLLLDLYMNDHRRIEHQSPYIRHHIRQLAFFRLIHESDLR 226
           +D  EL +I+ AF A+Q  +LL+L+L  ND +RI H     RH IRQLA+FR+IHESDL 
Sbjct: 1   MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHESDLV 60

Query: 227 CRESTRMDRRCFAILCTLLKTVAGLSSTEVVDVEEMVAMFSHIVAHDVKNRVVRTQFARS 286
           CR+STRMDRRCFAILC LL+T+AGL+STEVVDVEEMVAMF HI+AHDVKNRV++ +F RS
Sbjct: 61  CRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRS 120

Query: 287 GETISRHFNTVLHAVLRLHDVLLKKPEPVTASCTDPRWKWFQNCLGALDGTYIKVNVAVV 346
           GETI RHFN +  AV+RLHD LLKKP+PV   CTD RW+WF+NCLGALDGTYIKVNV   
Sbjct: 121 GETIFRHFNMIFLAVIRLHDELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPAS 180

Query: 347 DRPRYRTRKGEIATNVLAVCDTKGDFTFVLPGWEGSAADSRVLRDAISRPNRLTVPKGYY 406
           D+ RYRTRKGE+ATNVL VCDTKGDF +VL GWEGSAADSR+LRDA+SRPNRL VPKGYY
Sbjct: 181 DQARYRTRKGEVATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDALSRPNRLKVPKGYY 240

Query: 407 YLCDAGYPNAEGFLAPYRGERYHLSEWRGAGNAPTTPKEFFNMKHSSARNVIERAFGLLK 466
           YL D GYPN EGFLAPYRG+RYHL EWR   NAP+T KEFFNMKHSSARNVIERAFG+LK
Sbjct: 241 YLVDVGYPNVEGFLAPYRGQRYHLQEWRDPENAPSTSKEFFNMKHSSARNVIERAFGVLK 300

Query: 467 GRWAILRGKSYYPVRIQGRTIAACCLLHNLINREMGDREIPDEMDEVDSASITTDGENIN 526
           GRWAILRGKSYYPV +Q RTI ACCLL+NLINREM + +I D +DEVDS   TT  ++I+
Sbjct: 301 GRWAILRGKSYYPVEVQCRTILACCLLYNLINREMTNFDIEDNIDEVDSTHATTAADDIH 360

Query: 527 FIETSDEWSRWRDELATQMFSNWELRN 554
           +IETS+EWS+WRD+LA +MF+ WELRN
Sbjct: 361 YIETSNEWSQWRDDLAEEMFTEWELRN 387

[Close]

BLAST of Lcy09g019730 vs. TAIR 10
Match: AT5G41980.1 (CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 201.1 bits (510), Expect = 2.4e-51
Identity = 118/348 (33.91%), Postives = 185/348 (53.16%), Query Frame = 0


Query: 217 FRLIHESDLRCRESTRMDRRCFAILCTLLKTVAGLSSTEVVDVEEMVAMFSHIVAHDVKN 276
           +++++  + +C E+ RMD+  F  LC LL+T   L  T  + +E  +A+F  I+ H+++ 
Sbjct: 32  YQILNGPNEQCFENFRMDKPVFYKLCDLLQTRGLLRHTNRIKIEAQLAIFLFIIGHNLRT 91

Query: 277 RVVRTQFARSGETISRHFNTVLHAVLRL-HDVLLKKPEPVTASCTDPRWKWFQNCLGALD 336
           R V+  F  SGETISRHFN VL+AV+ +  D         T    DP   +F++C+G +D
Sbjct: 92  RAVQELFCYSGETISRHFNNVLNAVIAISKDFFQPNSNSDTLENDDP---YFKDCVGVVD 151

Query: 337 GTYIKVNVAVVDRPRYRTRKGEIATNVLAVCDTKGDFTFVLPGWEGSAADSRVLRDAISR 396
             +I V V V ++  +R   G +  NVLA       F +VL GWEGSA+D +VL  A++R
Sbjct: 152 SFHIPVMVGVDEQGPFRNGNGLLTQNVLAASSFDLRFNYVLAGWEGSASDQQVLNAALTR 211

Query: 397 PNRLTVPKGYYYLCDAGYPNAEGFLAPYRGERYHLSEWRGAGNAPTTPKEFFNMKHSSAR 456
            N+L VP+G YY+ D  YPN  GF+APY G          + N+    KE FN +H    
Sbjct: 212 RNKLQVPQGKYYIVDNKYPNLPGFIAPYHGV---------STNSREEAKEMFNERHKLLH 271

Query: 457 NVIERAFGLLKGRWAILRGKSYYPVRIQGRTIAACCLLHNLINREMGD----REIPDE-- 516
             I R FG LK R+ IL     YP++ Q + + A C LHN +  E  D    R   +E  
Sbjct: 272 RAIHRTFGALKERFPILLSAPPYPLQTQVKLVIAACALHNYVRLEKPDDLVFRMFEEETL 331

Query: 517 MDEVDSASITTDGENINFI--------ETSDEWSRWRDELATQMFSNW 550
            +  +   +  + E +  +        E  ++  R RDE+A+++++++
Sbjct: 332 AEAGEDREVALEEEQVEIVGQEHGFRPEEVEDSLRLRDEIASELWNHY 367

[Close]

BLAST of Lcy09g019730 vs. TAIR 10
Match: AT1G43722.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G28730.1); Has 924 Blast hits to 912 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 222; Fungi - 31; Plants - 661; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 151.8 bits (382), Expect = 1.7e-36
Identity = 92/265 (34.72%), Postives = 131/265 (49.43%), Query Frame = 0


Query: 217 FRLIHESDLRCRESTRMDRRCFAILCTLLKTVAGLSSTEVVDVEEMVAMFSHIVAHDVKN 276
           +R + +    C +  RM   CF  LC +L+T   L  T  + +EE VAMF  I  H+   
Sbjct: 56  WRRLQQDAAACLQLLRMSLPCFTTLCNMLQTNYDLQPTLNISIEESVAMFLRICGHNEVY 115

Query: 277 RVVRTQFARSGETISRHFNTVLHAVLRLHDVLLKKPE-------PVTASCTDPRWKWFQN 336
           R V  +F R+ ET+ R F  VL A   L    ++ P        P         W +F  
Sbjct: 116 RDVGLRFGRNQETVQRKFREVLTATELLACDYIRTPTRQELYRIPERLQVDQRYWPYFSG 175

Query: 337 CLGALDGTYIKVNVAVVDRPRYRTRKGEIATNVLAVCDTKGDFTFVLPGWEGSAADSRVL 396
            +GA+DGT++ V V    +  Y  R    + N++A+CD K  FT++  G  GS  D+ VL
Sbjct: 176 FVGAMDGTHVCVKVKPDLQGMYWNRHDNASLNIMAICDLKMLFTYIWNGAPGSCYDTAVL 235

Query: 397 RDAISRPNRLTVPKG-YYYLCDAGYPNAEGFLAPYRGE-----RYHLSEWRGAGNAPTTP 456
           + A    +   +P    YYL D+GYPN +G LAPYR       RYH+S++   G  P   
Sbjct: 236 QIAQQSDSEFPLPPSEKYYLVDSGYPNKQGLLAPYRSSRNRVVRYHMSQFY-YGPRPRNK 295

Query: 457 KEFFNMKHSSARNVIERAFGLLKGR 469
            E FN  H+S R+VIER F + K +
Sbjct: 296 HELFNQCHTSLRSVIERTFRIWKNK 319

[Close]

BLAST of Lcy09g019730 vs. TAIR 10
Match: AT5G35695.1 (CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41980.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 128.3 bits (321), Expect = 2.0e-29
Identity = 71/190 (37.37%), Postives = 100/190 (52.63%), Query Frame = 0


Query: 372 FTFVLPGWEGSAADSRVLRDAISRPNRLTVPKGYYYLCDAGYPNAEGFLAPYRGERYHLS 431
           F +VL GWEGSA DSRVL DA+ +          +YL D G+ N   FLAP+RG RYHL 
Sbjct: 25  FIYVLSGWEGSAHDSRVLSDALRK----------FYLVDCGFANRLNFLAPFRGVRYHLQ 84

Query: 432 EWRGAGNAPTTPKEFFNMKHSSARNVIERAFGLLKGRWAILRGKSYYPVRIQGRTIAACC 491
           E+ G    P TP E FN++H S RNVIER FG+ K R+AI +    +  + Q   +  C 
Sbjct: 85  EFAGQRRDPETPHELFNLRHVSLRNVIERIFGIFKSRFAIFKSAPPFSYKKQAGLVLTCA 144

Query: 492 LLHNLINRE--MGDREIPDEM-DEVDSASITTDGENINFIETS----------DEWSRWR 549
            LHN + +E    + + PDE+ +E D  +   +  N N I+            +  + WR
Sbjct: 145 ALHNFLRKECRSDEADFPDEVGNEGDVVNNEGNAMNTNEIDNEEPLEAQKQDRENTNMWR 204

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BLAST of Lcy09g019730 vs. TAIR 10
Match: AT5G12010.1 (unknown protein; INVOLVED IN: response to salt stress; LOCATED IN: chloroplast, plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G29780.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 94.7 bits (234), Expect = 2.4e-19
Identity = 81/302 (26.82%), Postives = 135/302 (44.70%), Query Frame = 0


Query: 228 RESTRMDRRCFAILCTLLKTVAGLSST---EVVDVEEMVAMFSHIVAHDVKNRVVRTQFA 287
           +++ RM +  F ++C  L +      T     + V + VA+    +A     R+V  +F 
Sbjct: 176 KKAFRMSKSTFELICDELNSAVAKEDTALRNAIPVRQRVAVCIWRLATGEPLRLVSKKF- 235

Query: 288 RSGETISRHFNTVLHAVLRLHDVLLKK----PEPVTASCTDPRWK---WFQNCLGALDGT 347
             G  IS     VL     + DVL+ K    P+  +      R++      N +G++  T
Sbjct: 236 --GLGISTCHKLVLEVCKAIKDVLMPKYLQWPDDESLRNIRERFESVSGIPNVVGSMYTT 295

Query: 348 YI-----KVNVAVVDRPRY--RTRKGEIATNVLAVCDTKGDFTFVLPGWEGSAADSRVLR 407
           +I     K++VA     R+  R +K   +  + AV + KG FT +  GW GS  D +VL 
Sbjct: 296 HIPIIAPKISVASYFNKRHTERNQKTSYSITIQAVVNPKGVFTDLCIGWPGSMPDDKVLE 355

Query: 408 DAI--SRPNRLTVPKGYYYLCDAGYPNAEGFLAPYRGERYHLSEWRGAGNAPTTPKEFFN 467
            ++   R N   + KG +     G+P  +  L PY  +              T  +  FN
Sbjct: 356 KSLLYQRANNGGLLKGMWVAGGPGHPLLDWVLVPYTQQNL------------TWTQHAFN 415

Query: 468 MKHSSARNVIERAFGLLKGRWAILRGKSYYPVRIQGRTIAACCLLHNLINREMGDREIPD 511
            K S  + V + AFG LKGRWA L+ ++   ++     + ACC+LHN+   EM + ++  
Sbjct: 416 EKMSEVQGVAKEAFGRLKGRWACLQKRTEVKLQDLPTVLGACCVLHNIC--EMREEKMEP 460

[Close]

BLAST of Lcy09g019730 vs. TAIR 10
Match: AT5G28730.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 496 Blast hits to 496 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 23; Plants - 470; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 93.6 bits (231), Expect = 5.4e-19
Identity = 71/215 (33.02%), Postives = 99/215 (46.05%), Query Frame = 0


Query: 220 IHESDLRCRESTRMDRRCFAILCTLLKTVAGLSSTEVVDVEEMVAMFSHIVAHDVKNRVV 279
           I+ +++ C+   RM    F  LC +L    GL S+  + ++E VA+F  I A +   R +
Sbjct: 17  IYSNEVSCQTLIRMSSEAFTQLCEILHGKYGLQSSTNISLDESVAIFLIICASNDTQRDI 76

Query: 280 RTQFARSGETISRHFNTVLHAVLRL--HDVLLKKPEPVTASCT----DPR-WKWFQNCLG 339
             +F  + ETI R F+ VL A+ RL    +  +K E + A       D R W +  + LG
Sbjct: 77  ALRFGHAQETIWRKFHDVLKAMERLAVEYIRPRKVEELRAISNRLQDDTRYWPFLMDLLG 136

Query: 340 ALDGTYIKVNVAVVDRPRYRTRKGEIATNVLAVCDTKGDFTFVLPGWEGSAADSRVLRDA 399
                                     + NVLA+CD    FT+   G  GS  D+RVL  A
Sbjct: 137 I------------------------ASFNVLAICDLDMLFTYCFVGMAGSTHDARVLSAA 196

Query: 400 ISRPNRLTV-PKGYYYLCDAGYPNAEGFLAPYRGE 427
           IS      V P   YYL D+GY N  G+LAPYR E
Sbjct: 197 ISDDPLFHVPPDSKYYLVDSGYANKRGYLAPYRRE 207

The following BLAST results are available for this feature:

BLAST of Lcy09g019730 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy09g019730 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TXW1	2.9e-169	74.42	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3BDX0	8.3e-169	74.16	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7U476	1.6e-167	73.90	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7U9H2	3.5e-167	73.39	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7VHB0	3.9e-166	72.61	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of Lcy09g019730 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0046727.1	5.9e-169	74.42	retrotransposon protein [Cucumis melo var. makuwa] >KAA0052100.1 retrotransposon...	[more]
KAA0035620.1	1.7e-168	74.16	retrotransposon protein [Cucumis melo var. makuwa] >KAA0038121.1 retrotransposon...	[more]
KAA0048361.1	3.2e-167	73.90	retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0051057.1	7.2e-167	73.39	retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0065736.1	8.0e-166	72.61	retrotransposon protein [Cucumis melo var. makuwa]	[more]

BLAST of Lcy09g019730 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G41980.1	2.4e-51	33.91	CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (Int...	[more]
AT1G43722.1	1.7e-36	34.72	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G35695.1	2.0e-29	37.37	CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (Int...	[more]
AT5G12010.1	2.4e-19	26.82	unknown protein; INVOLVED IN: response to salt stress; LOCATED IN: chloroplast, ...	[more]
AT5G28730.1	5.4e-19	33.02	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027806	Harbinger transposase-derived nuclease domain	PFAM	PF13359	DDE_Tnp_4	coord: 334..495 e-value: 3.9E-25 score: 88.3
None	No IPR available	PANTHER	PTHR22930:SF201	NUCLEASE HARBI1-LIKE PROTEIN	coord: 160..550
None	No IPR available	PANTHER	PTHR22930	UNCHARACTERIZED	coord: 160..550

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy09g019730.1	Lcy09g019730.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding