Lcy09g019590 (gene) Sponge gourd (P93075) v1

Overview
NameLcy09g019590
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description50S ribosomal protein L12, chloroplastic-like
LocationChr09: 44385320 .. 44390707 (-)
RNA-Seq ExpressionLcy09g019590
SyntenyLcy09g019590
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATCTTCTTCTTCTTCTTCTTCCCCAAATTCTCTCTTCAGCTTCTTTCTCTGCAACAATGGCTTCCACTCTCTCCACCGCTTCTCTCCGATCCCCATCTTGTTCTTCATCCTCTTTCCCCTCAAATTCCTCCCATTCCCCAAAACCCACTTCCCTCAATTTCCCCTTTTCATTCTCCTCCACCAATCTCTCTCTCCGCCTTATTCATCTCCGCCCACTCTCCGCCACCGCCGTGCCGGAGAAAGTTTCAGGACTCGGCGATGACATCTCCAAATTGACGCTCGAAGAGGCTCGAATCCTCGTCGATTACCTCCAAGAGAAGCTCGGCGTTTCCGCCGCCGCCTTCGCCCCTGCCGCTGTCGCCGTCGCGCCCGGCGCCGCTGCCGGCGGAGACGATGCGGCCGCCGCCGTCGAGGAGAAGACGGAGTTCGATGTCGTCATTGAGGATGTGCCGAGTAATGCGAGGATTGCTGTGATTAAGTCTGTTAGGGCTTTGACGAGCTTGGCGTTGAAGGAGGCAAAGGAGCTGATTGAAGGTTTGCCGAAGAAGTTTAAAGAAGGGGTTTCGAAGGAGGAGGCGGAGGAGGCGAAGAAGCAGCTTGAAGAGGCTGGTGCGAAGATTGCTATTGTTTGATTTCCGCTGGTTAGTTTCTTCAATTCTTAAGGTTTACTTACAATTTAGGCATTCTGGTGGAATTAGATATGGGCTTATTTTTTTTTTATTGTTAACTGATGAAGAATTTTGTTGAAATTCCGTTAATGAATGCCTTCTTTTTTTTCTGATTTCGCCATTGCTGTGGCTCTGTCTGTATGCTCTGCTCTGTTGATTTTTCTTGCTCACAATGTGTTTGTTAAAATGCCAGCAAGAAGCTTTGCTTAGGAATTCTAGTGAAATTAGAGATGGGGTATTTTTCTTTCCATTGTTGATGAATAATTTAGTTGAAATTCTGTTAATGAATGCTCTTTGTTTTTCTTGAATTTGTTCTTTGAATTCGCCATTGCTGAAAGCTTTGTTTGGCTGCTCTGTTCTGTTGATATTTCTTGATCCTAATGTGTTTGTTAGATTGCCAAGAAGAAGCTTTGTTGTGCACATGAAATCTCTTTTCGTCTGAACTTCTATAACCTTCTTTTCTTTTTCGAGTTCAACAACATTTGGGGTGGGGATTCGAACCTCTGACCTCTCTTATTGAAGTATTTGTCAATTACCGATGAGTTATGTTTACTTTGGCAAACTTGTGTAACTTATATGCGGATCTGAATGAGTAAAATTTTGGCCAATAAAATACGACTTGTTGCATTCTAGATATTTATCTGACCTTAATCTATTTGAATGTTTCTGCTTCGAAATGTGAAATCTATGGTCAAATACTTGACATTTTGTAACGTAGTGCAAAAACCTATGTTTGATATGTGTAATTTAATTGTTTGAACTTAAAAAAAATTATTCAAGGTGGTCACCTCAAGTGATTGACAATTTTATAACGTTGGATGTTTGAGATAGACATTAAAAAAATTTGTATCTCTTTTAGTCATTAGGGATGATGCAAATATGTAGATCCACATCCAACCTTATTAAGAGACCGTCTTAAACTATGGTTTTGATATCCTCGAGACTATATAAATCTACATCGTATAAAAATCATAATCTTGGAACTAAACATAGGTTTGGAAAACTTACCATATTATGCAATACAAACACAATATAGAAACTCAAACTTCCACTCCCAGGTTTCGTTTCATAAACCTAAATTTATTATGCTGTTAGCCAATAAATGGTTGATTTTCTTTTCGTTTTTGGGTGTTGGTTGATTTTCTGTCTCATATGTTGAGTTTAATTTTTTGGGTTTATTATTATTATTATTATTACTATTATTATTATAAGTGGTTGGTTTTCTTTGCCTCATAGATTGAGTTCATCGTGTATGGTTTGCCAACAAAAACATAGTTTAACTGACATAAGATTTTTACAATATGTGGTTCAAACCCTCCATTCCCACATGTTGTCAAAAAGAAAAGGGAAAATCGTGTATGATTCAACTGTTCAATATGAAATCTATTTTTGAAGCTTAAAATGACAAAATAGTAAAGGTTCCATTGTCTTAAAGAGAAATTTTCTTGAAAGACGGAAGGAATAAGCAACACTGATCTATAAGTATTCTCAAGAATAATGAACATTTCTATCCATAAATGATTATGAATAAAATTTATGCATTGGAGAAAACTAAATTGACCTATCCAAAAAATGGGGAAAAAAAACTATAATGGCACAAGAAAAATAGAATCATTTGAGTTCAGGGGTGAATATGAGCATTAAACTTGACAGAAGAAAGTTAAAATGAGTATAACTCAGTGGTAATTGACATGCACTCTTTAGTTTAACAAACGTGAAGGTGGGTGATTCATTCATCATATAAAAGTTTATGATAGAATTTTATGTTTTTTATGTTCTACTTTTAAGAATTTGAGGTGTTCTCGTTTTACTCATAAACTCCTATTAGAATTAAAGACTAAAGTTATGCTTAAAAAGAATCATATGCTACAAATAATAATAATAGTAATAATAATAATAAAATATTGAAGGACCATTGTTTAGAAACACAATGATATATATATTTTGACAAAAATTTGTTTTAAAAAAGATTGACCATAACTATCATTTAAAATTGTACACATTTTTAATAAAAAAAAGAATTTGGCTAAACATATGATTTAGTTCTCAATATTTGACTGTTTTTTTAGTTTAGTTGTTATTGTTAATGATAAGTTTAGATGATATGATACTTAATAAGTTGGACTAAATTAATGTAAGTTAAAACTTTTTAAACAATATAGGACTCAACTAGAAAAGATAAAAAAAAGGAACTGAACGTCAGGGACTAAACACATATATTTAGAAAGAAAGAAAAAAATTTGAAACATGACCGTTTTCGAGGAGTGAACGAAAATTTAGAAACTAAAAAGAAAAACACATCATTTTTTGAAGGAGCATTTGCACATATAGCAAAAAAAAACACCAAACATATTGGGAAAATGGCAAAAATTAAAACTATTTGTAGAAATAGAATAGCACAAAGTGACCTTAAGTTACAAAAATACCATTTTTATCGGTAGCTATCTGATAGAAAAGATTATCAATATCTATCACTAATAGTCATTGATAAACTACGATTAATCAGAGTCTATCAGTGATAGACACTGATAGAAAGGATTATGCGGAGTCTATCAGTGTCTATCACCGATAGTCACTAATACATCGAATTAATCGGAGTCATCAGTGTAACATTGATAAAAAGGATTATACGGAGCCTATCAACATGATAGTCTACTAGTGTCTATCATTGATAGACACTAATACATCAAATTAATCAGAGTCTATGAGTGTACGGAGTCTATTGATAGTTTATCAATGTCAATTACTAATAGACTTCGATTAATCAGAGTCTATCAGTGATAGACATTAATAAAAAGGATTATACATAGTCTATCATCATGATAATTTATCAGTGTCTATCACTGATAGTCACTAATAGACTTCAATTAATTGGAATCTATCACTGATAGACTTTGATTATCAAAGTTTATTAATGATAAACACCGATGGAAGGAAATATACTTAAATTGGTAGAATTTGCACACAATTCAAAATTAAATAGAGGTAAAACGGAAATTATGAAATTTTATTCTAATAAATTGTCATATTTACTATTATTTTTAGGGGCAACAAGAAAGGTGACTAAAAATAATTAGTAGGCTTGAAAAATGGCTACACAAGTTTATAAATTAAATGGATGGCTAAACGATTTTATGATTAATAAATTCCTATTTATAGAAGACGTAAATGCCCCTAACAAATTGTCTAAGGTGTTCCTAACGTTAAAAACTAAAATCAGAGTTTATGAGAGAGAAAATACCCCCTAACAAAGTTAGAGAGATTCTAGGAAGTTTGAAATAAAAAATCCAAGAAGCCAACCAAAAATTTGAAACTCTAGATTTACCATCTTCTTAAGAACTGTTTTCTGGAAAAAAGACACAAGGCGGCGAACACAAAAATTCGTACCTTTATTAGGAGAAAAAATGCAAAAAATGAACCCCCTCCAGGAGAAAAATTTCAACGCATTAAATGGAAGAACGCAAGAAGTAATACATTTTTAGCTACACCAAGAGCACGAAAACTGCAGAATTAAAAGCTTAAGAAAGAAAATATCTCCTATTCTTGCAAAGAGGAACTGAAAAATGGAAGAAGAAAGGAGAATTGTACTTTTATGCATTCCTTCACACTCTGTTGTATCACATTACCACCCTATCGACGACGAGCCTCCCTCCGACAATCGGCCGAAAAATCTTCTCCTCCTCCCGCTTGAAAACCGCTCGCTCATTGAAGCTTCTTCTCGACGACGACTGCCAGCAAAGATTTTTTGAAGATGAGAGATCGAAGGTATATAAATAACGGCTGGATTTTGCTTTTATTTGAAACTATTTTATAGACAATCCCTTGATTTTAGGGATTTGTTTTTGTTTTTTTGGGCAATATTTCGTGATTTATGTGAAAAAGGCCAGTTACATCCCCCAGGACCGTGCAAGGAAAAAAAAAAAAAGAACAAACGGATTAAGAAAGATGTAGTTGAAGAAGTTGACCCCGTCAGAGCGGTATGTACTGATATATACATATATTATTTACACCGTTTATGACCTGTTTGTGTATACTGGAGCCTAAAATTGAGATATATGTATCTGGATATAACTTTGTCCTATGTATTGAAGGGTGAAAGTGTGTTGGAATGCCTATTGAATGACACTCTGTTGTCTGTCTGTACTATTATATACATGCATATTAGTCATGCCAGTATATAAGTTGTGTGCCTCTCCCCTACTTTATAGACAATCCCTTGATTTTAGGGAATTTTTTTTGGCAATATTTCGTGATTTGTGTGAAAAAGGTCAACTACATCCACCTCCTTGTGACATGTTATTATAATTTGATTGTTTTTTATTGTGAAAATCCCTCAGGATGCTGTTAAGAAGGACCCTGCAAGGAAAAACAAAAAAAAAAAAAAGAACAAACGGGTTAAGAAAGATGTAGTTGAAGAAGTTGACCCCGTCAGAGTGGTATGTACTGATATATATACATATATTCATTACATCGTTTATGACCTGCTTGTGTGTATTGGAGCCTAAAATTGAGATGTATGTATCTGGATATAACTTTGTCCTATGTATTGAAGGGTGAAAGTGTGCTGGAATGCCTATTGAATGACACTTTGTTGTCTGTCTATACTATTATATACATGCATATTAGTCATGCCAGTATATAAGTTGTGTGCCCCACCCCACCCCACACCCCCACCCCACACCACCACAATGTATATACAGACGTCTATCTTGAATGTTTA

mRNA sequence

ATCTTCTTCTTCTTCTTCTTCCCCAAATTCTCTCTTCAGCTTCTTTCTCTGCAACAATGGCTTCCACTCTCTCCACCGCTTCTCTCCGATCCCCATCTTGTTCTTCATCCTCTTTCCCCTCAAATTCCTCCCATTCCCCAAAACCCACTTCCCTCAATTTCCCCTTTTCATTCTCCTCCACCAATCTCTCTCTCCGCCTTATTCATCTCCGCCCACTCTCCGCCACCGCCGTGCCGGAGAAAGTTTCAGGACTCGGCGATGACATCTCCAAATTGACGCTCGAAGAGGCTCGAATCCTCGTCGATTACCTCCAAGAGAAGCTCGGCGTTTCCGCCGCCGCCTTCGCCCCTGCCGCTGTCGCCGTCGCGCCCGGCGCCGCTGCCGGCGGAGACGATGCGGCCGCCGCCGTCGAGGAGAAGACGGAGTTCGATGTCGTCATTGAGGATGTGCCGAGTAATGCGAGGATTGCTGTGATTAAGTCTGTTAGGGCTTTGACGAGCTTGGCGTTGAAGGAGGCAAAGGAGCTGATTGAAGGTTTGCCGAAGAAGTTTAAAGAAGGGGTTTCGAAGGAGGAGGCGGAGGAGGCGAAGAAGCAGCTTGAAGAGGCTGGTGCGAAGATTGCTATTGTTTGATTTCCGCTGGATGCTGTTAAGAAGGACCCTGCAAGGAAAAACAAAAAAAAAAAAAAGAACAAACGGGTTAAGAAAGATGTAGTTGAAGAAGTTGACCCCGTCAGAGTGGTATGTACTGATATATATACATATATTCATTACATCGTTTATGACCTGCTTGTGTGTATTGGAGCCTAAAATTGAGATGTATGTATCTGGATATAACTTTGTCCTATGTATTGAAGGGTGAAAGTGTGCTGGAATGCCTATTGAATGACACTTTGTTGTCTGTCTATACTATTATATACATGCATATTAGTCATGCCAGTATATAAGTTGTGTGCCCCACCCCACCCCACACCCCCACCCCACACCACCACAATGTATATACAGACGTCTATCTTGAATGTTTA

Coding sequence (CDS)

ATGGCTTCCACTCTCTCCACCGCTTCTCTCCGATCCCCATCTTGTTCTTCATCCTCTTTCCCCTCAAATTCCTCCCATTCCCCAAAACCCACTTCCCTCAATTTCCCCTTTTCATTCTCCTCCACCAATCTCTCTCTCCGCCTTATTCATCTCCGCCCACTCTCCGCCACCGCCGTGCCGGAGAAAGTTTCAGGACTCGGCGATGACATCTCCAAATTGACGCTCGAAGAGGCTCGAATCCTCGTCGATTACCTCCAAGAGAAGCTCGGCGTTTCCGCCGCCGCCTTCGCCCCTGCCGCTGTCGCCGTCGCGCCCGGCGCCGCTGCCGGCGGAGACGATGCGGCCGCCGCCGTCGAGGAGAAGACGGAGTTCGATGTCGTCATTGAGGATGTGCCGAGTAATGCGAGGATTGCTGTGATTAAGTCTGTTAGGGCTTTGACGAGCTTGGCGTTGAAGGAGGCAAAGGAGCTGATTGAAGGTTTGCCGAAGAAGTTTAAAGAAGGGGTTTCGAAGGAGGAGGCGGAGGAGGCGAAGAAGCAGCTTGAAGAGGCTGGTGCGAAGATTGCTATTGTTTGA

Protein sequence

MASTLSTASLRSPSCSSSSFPSNSSHSPKPTSLNFPFSFSSTNLSLRLIHLRPLSATAVPEKVSGLGDDISKLTLEEARILVDYLQEKLGVSAAAFAPAAVAVAPGAAAGGDDAAAAVEEKTEFDVVIEDVPSNARIAVIKSVRALTSLALKEAKELIEGLPKKFKEGVSKEEAEEAKKQLEEAGAKIAIV
Homology
[Close]
BLAST of Lcy09g019590 vs. ExPASy Swiss-Prot
Match: P24929 (50S ribosomal protein L12, chloroplastic OS=Nicotiana tabacum OX=4097 GN=RPL12 PE=1 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 9.8e-50
Identity = 130/190 (68.42%), Postives = 151/190 (79.47%), Query Frame = 0 

Query: 1   MASTLSTASLRSPSCSSSSFPSNSSHSPKPTSLNFPFSFSSTNLSLRLIHLRPLSATAVP 60
           MASTLST +LRSPS S++S    S   PK  +L FP      +   R   LRPL+A   P
Sbjct: 1   MASTLSTITLRSPSPSTASSTHASIPFPK-KALEFPIRTPKLH-HRRATFLRPLAAVEAP 60

Query: 61  EKVSGLGDDISKLTLEEARILVDYLQEKLGVSAAAFAPAAVAVAPGAAAGGDDAAAAVEE 120
           EKV  LGD+IS LTL +A+ LV+YLQ+KLGV+AA+FAPAAVA APGAAA   +A A VEE
Sbjct: 61  EKVVQLGDEISNLTLADAQKLVEYLQDKLGVTAASFAPAAVAAAPGAAA---EAPAVVEE 120

Query: 121 KTEFDVVIEDVPSNARIAVIKSVRALTSLALKEAKELIEGLPKKFKEGVSKEEAEEAKKQ 180
           KTEFDVVI++VPSNARIA IK+VRALTSLALKEAKELIEGLPKKFKEGVSK+EAE+AKKQ
Sbjct: 121 KTEFDVVIDEVPSNARIATIKAVRALTSLALKEAKELIEGLPKKFKEGVSKDEAEDAKKQ 180

Query: 181 LEEAGAKIAI 191
           LEEAGAK++I
Sbjct: 181 LEEAGAKVSI 185

[Close]
BLAST of Lcy09g019590 vs. ExPASy Swiss-Prot
Match: P36688 (50S ribosomal protein L12, chloroplastic OS=Nicotiana sylvestris OX=4096 PE=2 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 1.3e-49
Identity = 129/190 (67.89%), Postives = 150/190 (78.95%), Query Frame = 0 

Query: 1   MASTLSTASLRSPSCSSSSFPSNSSHSPKPTSLNFPFSFSSTNLSLRLIHLRPLSATAVP 60
           MASTLST +LRSPS S+++    S   PK T L FP        + R   LRPL+A   P
Sbjct: 1   MASTLSTITLRSPSPSTATSTHASIPFPKKT-LEFPIRTPKLQ-NRRATFLRPLAAVEAP 60

Query: 61  EKVSGLGDDISKLTLEEARILVDYLQEKLGVSAAAFAPAAVAVAPGAAAGGDDAAAAVEE 120
           EKV  LGD+IS LTL +A+ LV+YLQ+KLGV+AA+FAPAAV  APGAAA   +A A VEE
Sbjct: 61  EKVVQLGDEISNLTLADAQKLVEYLQDKLGVTAASFAPAAVVAAPGAAA---EAPAVVEE 120

Query: 121 KTEFDVVIEDVPSNARIAVIKSVRALTSLALKEAKELIEGLPKKFKEGVSKEEAEEAKKQ 180
           KTEFDVVI++VPSNARIA IK+VRALTSLALKEAKELIEGLPKKFKEGVSK+EAE+AKKQ
Sbjct: 121 KTEFDVVIDEVPSNARIATIKAVRALTSLALKEAKELIEGLPKKFKEGVSKDEAEDAKKQ 180

Query: 181 LEEAGAKIAI 191
           LEEAGAK++I
Sbjct: 181 LEEAGAKVSI 185

[Close]
BLAST of Lcy09g019590 vs. ExPASy Swiss-Prot
Match: P02398 (50S ribosomal protein L12, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL12 PE=1 SV=2)

HSP 1 Score: 194.1 bits (492), Expect = 1.4e-48
Identity = 122/194 (62.89%), Postives = 150/194 (77.32%), Query Frame = 0 

Query: 1   MASTLSTASLRSPSCSSSSFPSNSSHSPKPTSLNFPFSFSSTNLSL---RLIHLRPLSAT 60
           MA+T + A+L  PS   +S P++S+    P  L FPF  ++  +SL   R   LRP++A 
Sbjct: 1   MAATTTMATLNLPSL--TSHPNSSTFPKHPQPLQFPFRTTTNPISLSSTRTTRLRPIAAV 60

Query: 61  AVPEKVSGLGDDISKLTLEEARILVDYLQEKLGVSAAAFAPAAVAVAPGAAAGGDDAAAA 120
             PEK+  LG  +S LTLEEAR+LVD+LQ+KLGVSAA+FAPAA   APGA A   DAA A
Sbjct: 61  EAPEKIEQLGTQLSGLTLEEARVLVDWLQDKLGVSAASFAPAAAVAAPGAPA---DAAPA 120

Query: 121 VEEKTEFDVVIEDVPSNARIAVIKSVRALTSLALKEAKELIEGLPKKFKEGVSKEEAEEA 180
           VEEKTEFDV I++VPSNARI+VIK+VRALTSL LKEAKELIEGLPKK KEGVSK++AE+A
Sbjct: 121 VEEKTEFDVSIDEVPSNARISVIKAVRALTSLGLKEAKELIEGLPKKLKEGVSKDDAEDA 180

Query: 181 KKQLEEAGAKIAIV 192
           KKQLE+AGAK++IV
Sbjct: 181 KKQLEDAGAKVSIV 189

[Close]
BLAST of Lcy09g019590 vs. ExPASy Swiss-Prot
Match: P36212 (50S ribosomal protein L12-3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL12C PE=2 SV=2)

HSP 1 Score: 189.9 bits (481), Expect = 2.7e-47
Identity = 125/192 (65.10%), Postives = 149/192 (77.60%), Query Frame = 0 

Query: 1   MASTLSTASLRSPSCSSSSFPSNSSHS--PKPTSLNFPFSFSSTNLSLRLIHLRPLSATA 60
           MAST  T S+ +   SSS   S S+H    KPT++ FPF  SS++ S R I+LRP+SA  
Sbjct: 1   MAST--TLSIATTIRSSSPLTSASTHHFLSKPTAIEFPFRLSSSS-SHRAINLRPISAVE 60

Query: 61  VPEKVSGLGDDISKLTLEEARILVDYLQEKLGVSAAAFAPAAVAVAPGAAAGGDDAAAAV 120
            PEK+  +G +IS LTLEEARILVDYLQ+K GVS  + APAA AVA  A  G   AAA V
Sbjct: 61  APEKIEKIGSEISSLTLEEARILVDYLQDKFGVSPLSLAPAAAAVAAPADGG---AAAVV 120

Query: 121 EEKTEFDVVIEDVPSNARIAVIKSVRALTSLALKEAKELIEGLPKKFKEGVSKEEAEEAK 180
           EE+TEFDVVI +VPS++RIAVIK+VRALTSLALKEAKELIEGLPKKFKEG++K+EAEEAK
Sbjct: 121 EEQTEFDVVINEVPSSSRIAVIKAVRALTSLALKEAKELIEGLPKKFKEGITKDEAEEAK 180

Query: 181 KQLEEAGAKIAI 191
           K LEEAGAK++I
Sbjct: 181 KTLEEAGAKVSI 186

[Close]
BLAST of Lcy09g019590 vs. ExPASy Swiss-Prot
Match: P36210 (50S ribosomal protein L12-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL12A PE=2 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 4.3e-45
Identity = 121/195 (62.05%), Postives = 150/195 (76.92%), Query Frame = 0 

Query: 2   ASTLSTASLRSPSCSSSSFPSNSS--HSP-KPTSLNFPFSF---SSTNLSLRLIHLRPLS 61
           ++TLS A+    +  SSS+P+ +S  H P + T++ FP  F   SS+ L+ R  HLRP++
Sbjct: 3   STTLSIAT----TIRSSSYPTLASINHFPSRTTTIEFPSRFGGGSSSTLTHRATHLRPIA 62

Query: 62  ATAVPEKVSGLGDDISKLTLEEARILVDYLQEKLGVSAAAFAPAAVAVAPGAAAGGDDAA 121
           A   PEK+  +G +IS LTLEEARILVDYLQ+K GVS  + APAA AVA  A  G   AA
Sbjct: 63  AVEAPEKIEKIGSEISSLTLEEARILVDYLQDKFGVSPLSLAPAAAAVAAPADGG---AA 122

Query: 122 AAVEEKTEFDVVIEDVPSNARIAVIKSVRALTSLALKEAKELIEGLPKKFKEGVSKEEAE 181
           A VEE+TEFDVVI +VPS++RIAVIK+VRALTSLALKEAKELIEGLPKKFKEG++K+EAE
Sbjct: 123 AVVEEQTEFDVVINEVPSSSRIAVIKAVRALTSLALKEAKELIEGLPKKFKEGITKDEAE 182

Query: 182 EAKKQLEEAGAKIAI 191
           EAKK LEEAGAK++I
Sbjct: 183 EAKKTLEEAGAKVSI 190

[Close]
BLAST of Lcy09g019590 vs. ExPASy TrEMBL
Match: A0A6J1DD25 (50S ribosomal protein L12, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111019918 PE=3 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 3.5e-74
Identity = 169/191 (88.48%), Postives = 178/191 (93.19%), Query Frame = 0 

Query: 1   MASTLSTASLRSPSCSSSSFPSNSSHSPKPTSLNFPFSFSSTNLSLRLIHLRPLSATAVP 60
           MASTLSTASLRSPSCSSSS+PSN S SP+P SL+FPFS SS NLS RL+HLRP+SA A P
Sbjct: 1   MASTLSTASLRSPSCSSSSYPSNFSQSPRPFSLHFPFSPSSNNLSHRLVHLRPVSAAAAP 60

Query: 61  EKVSGLGDDISKLTLEEARILVDYLQEKLGVSAAAFAPAAVAVAPGAAAGGDDAAAAVEE 120
           EKV  +GD ISKLTLEEARILVDYLQEKLGVSAAAFAPAAVAVAPGA AGGD AAAAVEE
Sbjct: 61  EKVVEIGDVISKLTLEEARILVDYLQEKLGVSAAAFAPAAVAVAPGAGAGGDVAAAAVEE 120

Query: 121 KTEFDVVIEDVPSNARIAVIKSVRALTSLALKEAKELIEGLPKKFKEGVSKEEAEEAKKQ 180
           KTEFDVVIEDVPSNARIAVIK+VRALTSLALKEAKELIEGLPKKFKEG+SKEEAE+AKKQ
Sbjct: 121 KTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQ 180

Query: 181 LEEAGAKIAIV 192
           LEEAGAKIAIV
Sbjct: 181 LEEAGAKIAIV 191

[Close]
BLAST of Lcy09g019590 vs. ExPASy TrEMBL
Match: A0A5A7UJJ4 (50S ribosomal protein L12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1545G00330 PE=3 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 1.0e-73
Identity = 170/193 (88.08%), Postives = 180/193 (93.26%), Query Frame = 0 

Query: 1   MASTLSTASLR--SPSCSSSSFPSNSSHSPKPTSLNFPFSFSSTNLSLRLIHLRPLSATA 60
           M+STLSTASLR  SPS SSSS+PSN SHS KPT L FPFSF+ TNLSLRLIH RP+SA A
Sbjct: 1   MSSTLSTASLRSPSPSSSSSSYPSNFSHSLKPTPLRFPFSFAPTNLSLRLIHHRPISAVA 60

Query: 61  VPEKVSGLGDDISKLTLEEARILVDYLQEKLGVSAAAFAPAAVAVAPGAAAGGDDAAAAV 120
           VPEKVS +GD ISKLTLEEAR LVDYLQEKLGVSAA+FAPAAVAVAPGAAAGGDDAAAAV
Sbjct: 61  VPEKVSEIGDVISKLTLEEARTLVDYLQEKLGVSAASFAPAAVAVAPGAAAGGDDAAAAV 120

Query: 121 EEKTEFDVVIEDVPSNARIAVIKSVRALTSLALKEAKELIEGLPKKFKEGVSKEEAEEAK 180
           EEKTEFDVVIE+VPSNARIAVIK+VRALTSLALKEAKELIEGLPKKFKEG+SKEEAE+AK
Sbjct: 121 EEKTEFDVVIEEVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAK 180

Query: 181 KQLEEAGAKIAIV 192
           KQLEEAGAKIAIV
Sbjct: 181 KQLEEAGAKIAIV 193

[Close]
BLAST of Lcy09g019590 vs. ExPASy TrEMBL
Match: A0A1S3B8B3 (50S ribosomal protein L12, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103487096 PE=3 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 1.0e-73
Identity = 170/193 (88.08%), Postives = 180/193 (93.26%), Query Frame = 0 

Query: 1   MASTLSTASLR--SPSCSSSSFPSNSSHSPKPTSLNFPFSFSSTNLSLRLIHLRPLSATA 60
           M+STLSTASLR  SPS SSSS+PSN SHS KPT L FPFSF+ TNLSLRLIH RP+SA A
Sbjct: 1   MSSTLSTASLRSPSPSSSSSSYPSNFSHSLKPTPLRFPFSFAPTNLSLRLIHHRPISAVA 60

Query: 61  VPEKVSGLGDDISKLTLEEARILVDYLQEKLGVSAAAFAPAAVAVAPGAAAGGDDAAAAV 120
           VPEKVS +GD ISKLTLEEAR LVDYLQEKLGVSAA+FAPAAVAVAPGAAAGGDDAAAAV
Sbjct: 61  VPEKVSEIGDVISKLTLEEARTLVDYLQEKLGVSAASFAPAAVAVAPGAAAGGDDAAAAV 120

Query: 121 EEKTEFDVVIEDVPSNARIAVIKSVRALTSLALKEAKELIEGLPKKFKEGVSKEEAEEAK 180
           EEKTEFDVVIE+VPSNARIAVIK+VRALTSLALKEAKELIEGLPKKFKEG+SKEEAE+AK
Sbjct: 121 EEKTEFDVVIEEVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAK 180

Query: 181 KQLEEAGAKIAIV 192
           KQLEEAGAKIAIV
Sbjct: 181 KQLEEAGAKIAIV 193

[Close]
BLAST of Lcy09g019590 vs. ExPASy TrEMBL
Match: A0A6J1JLN3 (50S ribosomal protein L12, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111486322 PE=3 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 3.0e-73
Identity = 169/191 (88.48%), Postives = 179/191 (93.72%), Query Frame = 0 

Query: 1   MASTLSTASLRSPSCSSSSFPSNSSHSPKPTSLNFPFSFSSTNLSLRLIHLRPLSATAVP 60
           MASTLSTASL+ PSCSSSSFPS  SHSPK  SL+FP S SS+NLSLRL+HLRPLSATAVP
Sbjct: 1   MASTLSTASLQFPSCSSSSFPSKFSHSPKSKSLHFPSSLSSSNLSLRLVHLRPLSATAVP 60

Query: 61  EKVSGLGDDISKLTLEEARILVDYLQEKLGVSAAAFAPAAVAVAPGAAAGGDDAAAAVEE 120
           EKV+ +GD ISKLTLEEARILVDYLQ+KLGVSAAAFAPAAVAVA G  AGGDDAAAAVEE
Sbjct: 61  EKVTEIGDVISKLTLEEARILVDYLQDKLGVSAAAFAPAAVAVASG-PAGGDDAAAAVEE 120

Query: 121 KTEFDVVIEDVPSNARIAVIKSVRALTSLALKEAKELIEGLPKKFKEGVSKEEAEEAKKQ 180
           KTEFDVVIEDVPSNARIAVIK+VRALTSLALKEAKELIEGLPKKFKEG+SKEEAE+AKKQ
Sbjct: 121 KTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQ 180

Query: 181 LEEAGAKIAIV 192
           LEEAGAKIAIV
Sbjct: 181 LEEAGAKIAIV 190

[Close]
BLAST of Lcy09g019590 vs. ExPASy TrEMBL
Match: A0A0A0LHZ4 (Ribosomal protein L12-C OS=Cucumis sativus OX=3659 GN=Csa_3G837570 PE=3 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 3.0e-73
Identity = 166/191 (86.91%), Postives = 176/191 (92.15%), Query Frame = 0 

Query: 1   MASTLSTASLRSPSCSSSSFPSNSSHSPKPTSLNFPFSFSSTNLSLRLIHLRPLSATAVP 60
           M+STLSTASLRSPS SSSS+PSN SHS KPT L FPFSF+ TNLSLRLIH RP+SA AVP
Sbjct: 1   MSSTLSTASLRSPSSSSSSYPSNFSHSLKPTPLRFPFSFAPTNLSLRLIHHRPISAVAVP 60

Query: 61  EKVSGLGDDISKLTLEEARILVDYLQEKLGVSAAAFAPAAVAVAPGAAAGGDDAAAAVEE 120
           EKVS +GD ISKLTLEEAR LVDYLQEKLGVSAA+FAPA   VAPG AAGGDDAAAAVEE
Sbjct: 61  EKVSEIGDVISKLTLEEARTLVDYLQEKLGVSAASFAPAPATVAPGTAAGGDDAAAAVEE 120

Query: 121 KTEFDVVIEDVPSNARIAVIKSVRALTSLALKEAKELIEGLPKKFKEGVSKEEAEEAKKQ 180
           KTEFDVVIE+VPSNARIAVIKSVRALTSLALKEAKELIEGLPKKFKEG+SKEEAE+AKKQ
Sbjct: 121 KTEFDVVIEEVPSNARIAVIKSVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQ 180

Query: 181 LEEAGAKIAIV 192
           LEEAGAKI+IV
Sbjct: 181 LEEAGAKISIV 191

[Close]
BLAST of Lcy09g019590 vs. NCBI nr
Match: XP_038903222.1 (50S ribosomal protein L12, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 290.8 bits (743), Expect = 8.5e-75
Identity = 169/191 (88.48%), Postives = 180/191 (94.24%), Query Frame = 0 

Query: 1   MASTLSTASLRSPSCSSSSFPSNSSHSPKPTSLNFPFSFSSTNLSLRLIHLRPLSATAVP 60
           M+STLSTASLRSPS S SS+PSN SHS KPT LNFPFSFSSTNLSLRL+H RP+SA AVP
Sbjct: 1   MSSTLSTASLRSPSSSLSSYPSNFSHSLKPTPLNFPFSFSSTNLSLRLVHHRPISAVAVP 60

Query: 61  EKVSGLGDDISKLTLEEARILVDYLQEKLGVSAAAFAPAAVAVAPGAAAGGDDAAAAVEE 120
           EKVS +GD IS+LTLEEAR LVDYLQEKLGVSAA+FAPA VAVAPGAAAGGDDAAAAVEE
Sbjct: 61  EKVSEIGDVISQLTLEEARTLVDYLQEKLGVSAASFAPAVVAVAPGAAAGGDDAAAAVEE 120

Query: 121 KTEFDVVIEDVPSNARIAVIKSVRALTSLALKEAKELIEGLPKKFKEGVSKEEAEEAKKQ 180
           KTEFDVVIE+VPSNARIAVIK+VRALTSLALKEAKELIEGLPKKFKEG+SKEEAE+AKKQ
Sbjct: 121 KTEFDVVIEEVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQ 180

Query: 181 LEEAGAKIAIV 192
           LEEAGAKIAIV
Sbjct: 181 LEEAGAKIAIV 191

[Close]
BLAST of Lcy09g019590 vs. NCBI nr
Match: XP_022152130.1 (50S ribosomal protein L12, chloroplastic-like [Momordica charantia])

HSP 1 Score: 287.7 bits (735), Expect = 7.2e-74
Identity = 169/191 (88.48%), Postives = 178/191 (93.19%), Query Frame = 0 

Query: 1   MASTLSTASLRSPSCSSSSFPSNSSHSPKPTSLNFPFSFSSTNLSLRLIHLRPLSATAVP 60
           MASTLSTASLRSPSCSSSS+PSN S SP+P SL+FPFS SS NLS RL+HLRP+SA A P
Sbjct: 1   MASTLSTASLRSPSCSSSSYPSNFSQSPRPFSLHFPFSPSSNNLSHRLVHLRPVSAAAAP 60

Query: 61  EKVSGLGDDISKLTLEEARILVDYLQEKLGVSAAAFAPAAVAVAPGAAAGGDDAAAAVEE 120
           EKV  +GD ISKLTLEEARILVDYLQEKLGVSAAAFAPAAVAVAPGA AGGD AAAAVEE
Sbjct: 61  EKVVEIGDVISKLTLEEARILVDYLQEKLGVSAAAFAPAAVAVAPGAGAGGDVAAAAVEE 120

Query: 121 KTEFDVVIEDVPSNARIAVIKSVRALTSLALKEAKELIEGLPKKFKEGVSKEEAEEAKKQ 180
           KTEFDVVIEDVPSNARIAVIK+VRALTSLALKEAKELIEGLPKKFKEG+SKEEAE+AKKQ
Sbjct: 121 KTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQ 180

Query: 181 LEEAGAKIAIV 192
           LEEAGAKIAIV
Sbjct: 181 LEEAGAKIAIV 191

[Close]
BLAST of Lcy09g019590 vs. NCBI nr
Match: XP_008443526.1 (PREDICTED: 50S ribosomal protein L12, chloroplastic-like [Cucumis melo] >KAA0053661.1 50S ribosomal protein L12 [Cucumis melo var. makuwa] >TYK00831.1 50S ribosomal protein L12 [Cucumis melo var. makuwa])

HSP 1 Score: 286.2 bits (731), Expect = 2.1e-73
Identity = 170/193 (88.08%), Postives = 180/193 (93.26%), Query Frame = 0 

Query: 1   MASTLSTASLR--SPSCSSSSFPSNSSHSPKPTSLNFPFSFSSTNLSLRLIHLRPLSATA 60
           M+STLSTASLR  SPS SSSS+PSN SHS KPT L FPFSF+ TNLSLRLIH RP+SA A
Sbjct: 1   MSSTLSTASLRSPSPSSSSSSYPSNFSHSLKPTPLRFPFSFAPTNLSLRLIHHRPISAVA 60

Query: 61  VPEKVSGLGDDISKLTLEEARILVDYLQEKLGVSAAAFAPAAVAVAPGAAAGGDDAAAAV 120
           VPEKVS +GD ISKLTLEEAR LVDYLQEKLGVSAA+FAPAAVAVAPGAAAGGDDAAAAV
Sbjct: 61  VPEKVSEIGDVISKLTLEEARTLVDYLQEKLGVSAASFAPAAVAVAPGAAAGGDDAAAAV 120

Query: 121 EEKTEFDVVIEDVPSNARIAVIKSVRALTSLALKEAKELIEGLPKKFKEGVSKEEAEEAK 180
           EEKTEFDVVIE+VPSNARIAVIK+VRALTSLALKEAKELIEGLPKKFKEG+SKEEAE+AK
Sbjct: 121 EEKTEFDVVIEEVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAK 180

Query: 181 KQLEEAGAKIAIV 192
           KQLEEAGAKIAIV
Sbjct: 181 KQLEEAGAKIAIV 193

[Close]
BLAST of Lcy09g019590 vs. NCBI nr
Match: KAG6588957.1 (50S ribosomal protein L12-1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 285.4 bits (729), Expect = 3.6e-73
Identity = 168/191 (87.96%), Postives = 180/191 (94.24%), Query Frame = 0 

Query: 1   MASTLSTASLRSPSCSSSSFPSNSSHSPKPTSLNFPFSFSSTNLSLRLIHLRPLSATAVP 60
           MASTLSTASL+ PSCSSSSFPS  SHSPK  SL+FP S SS+NLSLRL+HLRPLSATAVP
Sbjct: 1   MASTLSTASLQFPSCSSSSFPSKFSHSPKSKSLHFPSSLSSSNLSLRLVHLRPLSATAVP 60

Query: 61  EKVSGLGDDISKLTLEEARILVDYLQEKLGVSAAAFAPAAVAVAPGAAAGGDDAAAAVEE 120
           EKV+ +GD ISKLTLEEARILVDYLQ+KLGVSAAAFAPAAV VAPG +AGG+DAAAAVEE
Sbjct: 61  EKVTEIGDVISKLTLEEARILVDYLQDKLGVSAAAFAPAAVVVAPG-SAGGEDAAAAVEE 120

Query: 121 KTEFDVVIEDVPSNARIAVIKSVRALTSLALKEAKELIEGLPKKFKEGVSKEEAEEAKKQ 180
           KTEFDVVIEDVPSNARIAVIK+VRALTSLALKEAKELIEGLPKKFKEG+SKEEAE+AKKQ
Sbjct: 121 KTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQ 180

Query: 181 LEEAGAKIAIV 192
           LEEAGAKIAIV
Sbjct: 181 LEEAGAKIAIV 190

[Close]
BLAST of Lcy09g019590 vs. NCBI nr
Match: KAG7022725.1 (50S ribosomal protein L12, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 285.0 bits (728), Expect = 4.7e-73
Identity = 167/191 (87.43%), Postives = 180/191 (94.24%), Query Frame = 0 

Query: 1   MASTLSTASLRSPSCSSSSFPSNSSHSPKPTSLNFPFSFSSTNLSLRLIHLRPLSATAVP 60
           MASTLSTASL+ PSCSSSSFPS  SHSPK  SL+FP S SS+NLSLRL+HLRPLSATAVP
Sbjct: 1   MASTLSTASLQFPSCSSSSFPSKFSHSPKSKSLHFPSSLSSSNLSLRLVHLRPLSATAVP 60

Query: 61  EKVSGLGDDISKLTLEEARILVDYLQEKLGVSAAAFAPAAVAVAPGAAAGGDDAAAAVEE 120
           EKV+ +GD ISKLTLEEAR+LVDYLQ+KLGVSAAAFAPAAV VAPG +AGG+DAAAAVEE
Sbjct: 61  EKVTEIGDVISKLTLEEARVLVDYLQDKLGVSAAAFAPAAVVVAPG-SAGGEDAAAAVEE 120

Query: 121 KTEFDVVIEDVPSNARIAVIKSVRALTSLALKEAKELIEGLPKKFKEGVSKEEAEEAKKQ 180
           KTEFDVVIEDVPSNARIAVIK+VRALTSLALKEAKELIEGLPKKFKEG+SKEEAE+AKKQ
Sbjct: 121 KTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQ 180

Query: 181 LEEAGAKIAIV 192
           LEEAGAKIAIV
Sbjct: 181 LEEAGAKIAIV 190

[Close]
BLAST of Lcy09g019590 vs. TAIR 10
Match: AT3G27850.1 (ribosomal protein L12-C )

HSP 1 Score: 189.9 bits (481), Expect = 1.9e-48
Identity = 125/192 (65.10%), Postives = 149/192 (77.60%), Query Frame = 0 

Query: 1   MASTLSTASLRSPSCSSSSFPSNSSHS--PKPTSLNFPFSFSSTNLSLRLIHLRPLSATA 60
           MAST  T S+ +   SSS   S S+H    KPT++ FPF  SS++ S R I+LRP+SA  
Sbjct: 1   MAST--TLSIATTIRSSSPLTSASTHHFLSKPTAIEFPFRLSSSS-SHRAINLRPISAVE 60

Query: 61  VPEKVSGLGDDISKLTLEEARILVDYLQEKLGVSAAAFAPAAVAVAPGAAAGGDDAAAAV 120
            PEK+  +G +IS LTLEEARILVDYLQ+K GVS  + APAA AVA  A  G   AAA V
Sbjct: 61  APEKIEKIGSEISSLTLEEARILVDYLQDKFGVSPLSLAPAAAAVAAPADGG---AAAVV 120

Query: 121 EEKTEFDVVIEDVPSNARIAVIKSVRALTSLALKEAKELIEGLPKKFKEGVSKEEAEEAK 180
           EE+TEFDVVI +VPS++RIAVIK+VRALTSLALKEAKELIEGLPKKFKEG++K+EAEEAK
Sbjct: 121 EEQTEFDVVINEVPSSSRIAVIKAVRALTSLALKEAKELIEGLPKKFKEGITKDEAEEAK 180

Query: 181 KQLEEAGAKIAI 191
           K LEEAGAK++I
Sbjct: 181 KTLEEAGAKVSI 186

[Close]
BLAST of Lcy09g019590 vs. TAIR 10
Match: AT3G27830.1 (ribosomal protein L12-A )

HSP 1 Score: 182.6 bits (462), Expect = 3.0e-46
Identity = 121/195 (62.05%), Postives = 150/195 (76.92%), Query Frame = 0 

Query: 2   ASTLSTASLRSPSCSSSSFPSNSS--HSP-KPTSLNFPFSF---SSTNLSLRLIHLRPLS 61
           ++TLS A+    +  SSS+P+ +S  H P + T++ FP  F   SS+ L+ R  HLRP++
Sbjct: 3   STTLSIAT----TIRSSSYPTLASINHFPSRTTTIEFPSRFGGGSSSTLTHRATHLRPIA 62

Query: 62  ATAVPEKVSGLGDDISKLTLEEARILVDYLQEKLGVSAAAFAPAAVAVAPGAAAGGDDAA 121
           A   PEK+  +G +IS LTLEEARILVDYLQ+K GVS  + APAA AVA  A  G   AA
Sbjct: 63  AVEAPEKIEKIGSEISSLTLEEARILVDYLQDKFGVSPLSLAPAAAAVAAPADGG---AA 122

Query: 122 AAVEEKTEFDVVIEDVPSNARIAVIKSVRALTSLALKEAKELIEGLPKKFKEGVSKEEAE 181
           A VEE+TEFDVVI +VPS++RIAVIK+VRALTSLALKEAKELIEGLPKKFKEG++K+EAE
Sbjct: 123 AVVEEQTEFDVVINEVPSSSRIAVIKAVRALTSLALKEAKELIEGLPKKFKEGITKDEAE 182

Query: 182 EAKKQLEEAGAKIAI 191
           EAKK LEEAGAK++I
Sbjct: 183 EAKKTLEEAGAKVSI 190

[Close]
BLAST of Lcy09g019590 vs. TAIR 10
Match: AT3G27840.1 (ribosomal protein L12-B )

HSP 1 Score: 167.9 bits (424), Expect = 7.7e-42
Identity = 110/193 (56.99%), Postives = 136/193 (70.47%), Query Frame = 0 

Query: 2   ASTLSTASLRSPSCSSSSFPSNSSHSPKPTSLNFPFSF---SSTNLSLRLIHLRPLSATA 61
           A+TLS A+    S  SS   S      +P S+ FPFSF   SS+ LS R I+L P+SA  
Sbjct: 3   ATTLSIATTIRSSSFSSGLASAHHFPSRPLSIEFPFSFGVSSSSTLSHRAIYLHPISAVK 62

Query: 62  VPEKVSGLGDDISKLTLEEARILVDYLQEKLGVSAAAFAPAAVAVAPGAAAGGDDAAAAV 121
            P+K+  +G +IS LTLEE+RILVDY+Q+K GVS    APAA A+ P    GG  A A+V
Sbjct: 63  TPKKIKKIGSEISSLTLEESRILVDYVQDKFGVSILFSAPAAAALPPPLDNGG--ATASV 122

Query: 122 EEKTEFDVVIEDVPSNARIAVIKSVRALTSLALKEAKELIEGLPKKFKEGVSKEEAEEAK 181
           E +T FDVVI DVP   RIAVI ++RA+TSL+L E+KELIEG PKKFKEGV+K+EAEE K
Sbjct: 123 ERQTTFDVVINDVPRGNRIAVITAIRAMTSLSLSESKELIEGFPKKFKEGVTKDEAEEDK 182

Query: 182 KQLEEAGAKIAIV 192
            QLEEAGAK++IV
Sbjct: 183 TQLEEAGAKVSIV 193

[Close]
BLAST of Lcy09g019590 vs. TAIR 10
Match: AT4G36420.1 (Ribosomal protein L12 family protein )

HSP 1 Score: 81.3 bits (199), Expect = 9.5e-16
Identity = 63/157 (40.13%), Postives = 94/157 (59.87%), Query Frame = 0 

Query: 41  STNLSLRLIHLRPLSATAV-PEKVSGLGDDISKLTLEEARILVDYLQEKLGVS----AAA 100
           S+++ L  I  R  S+ A   E VS + +++S LTL E   L + L++KL +S     AA
Sbjct: 22  SSSVQLFTIQSRSYSSPATQSENVSKIVNELSNLTLLETMDLTEILRQKLNISELPVMAA 81

Query: 101 FAPAAVAVAPGA--AAGGDDAAAAVEEKTEFDVVIEDVPSNARIAVIKSVRALTSLALKE 160
             P       GA  +AGG+      E KT FDV+++   + ++I VIK VR +T+L LKE
Sbjct: 82  MMPGMSLPGSGASKSAGGEGKEKKKEAKTAFDVMLQAYDAVSKIKVIKEVRTITALGLKE 141

Query: 161 AKELIEGLPKKFKEGVSKEEAEEAKKQLEEAGAKIAI 191
           AK+L+E  P   K+GVSKEEAE+  ++L+  GAK+A+
Sbjct: 142 AKDLVEKAPTLLKKGVSKEEAEKIIEKLKAVGAKVAM 178

[Close]
BLAST of Lcy09g019590 vs. TAIR 10
Match: AT4G37660.1 (Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein )

HSP 1 Score: 63.5 bits (153), Expect = 2.1e-10
Identity = 56/146 (38.36%), Postives = 78/146 (53.42%), Query Frame = 0 

Query: 52  RPLSATAVPE----KVSGLGDDISKLTLEEARILVDY---LQEKLGVSAAAFAPAAVAVA 111
           R L A A PE    K+  + DD+ KL   E   L DY      K+G++    A A     
Sbjct: 27  RHLCAVASPEARTKKLERIADDLLKLNRIE---LYDYSLLFSHKIGLNRYGSAVAVTGSV 86

Query: 112 PGAAAGGDDAAAAVEEKTEFDVVIEDVPSNARIAVIKSVRALTSLALKEAKELIEGLPKK 171
             A+A  +   A   EKT FDV +E   + ++I VIK +RA T L LKEAK L+E  P  
Sbjct: 87  GDASASTETKTA---EKTTFDVKLEKFEAASKIKVIKEIRAFTDLGLKEAKALVEKAPVI 146

Query: 172 FKEGVSKEEAEEAKKQLEEAGAKIAI 191
            K G++KEEAE+  ++L+  GA +A+
Sbjct: 147 VKNGLTKEEAEKIMEKLKAVGAIVAL 166

The following BLAST results are available for this feature:
BLAST of Lcy09g019590 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P249299.8e-5068.4250S ribosomal protein L12, chloroplastic OS=Nicotiana tabacum OX=4097 GN=RPL12 P... [more]
P366881.3e-4967.8950S ribosomal protein L12, chloroplastic OS=Nicotiana sylvestris OX=4096 PE=2 SV... [more]
P023981.4e-4862.8950S ribosomal protein L12, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL12 P... [more]
P362122.7e-4765.1050S ribosomal protein L12-3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RP... [more]
P362104.3e-4562.0550S ribosomal protein L12-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RP... [more]
BLAST of Lcy09g019590 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DD253.5e-7488.4850S ribosomal protein L12, chloroplastic-like OS=Momordica charantia OX=3673 GN=... [more]
A0A5A7UJJ41.0e-7388.0850S ribosomal protein L12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo... [more]
A0A1S3B8B31.0e-7388.0850S ribosomal protein L12, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC1034... [more]
A0A6J1JLN33.0e-7388.4850S ribosomal protein L12, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC... [more]
A0A0A0LHZ43.0e-7386.91Ribosomal protein L12-C OS=Cucumis sativus OX=3659 GN=Csa_3G837570 PE=3 SV=1[more]
BLAST of Lcy09g019590 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038903222.18.5e-7588.4850S ribosomal protein L12, chloroplastic-like [Benincasa hispida][more]
XP_022152130.17.2e-7488.4850S ribosomal protein L12, chloroplastic-like [Momordica charantia][more]
XP_008443526.12.1e-7388.08PREDICTED: 50S ribosomal protein L12, chloroplastic-like [Cucumis melo] >KAA0053... [more]
KAG6588957.13.6e-7387.9650S ribosomal protein L12-1, chloroplastic, partial [Cucurbita argyrosperma subs... [more]
KAG7022725.14.7e-7387.4350S ribosomal protein L12, chloroplastic, partial [Cucurbita argyrosperma subsp.... [more]
BLAST of Lcy09g019590 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G27850.11.9e-4865.10ribosomal protein L12-C [more]
AT3G27830.13.0e-4662.05ribosomal protein L12-A [more]
AT3G27840.17.7e-4256.99ribosomal protein L12-B [more]
AT4G36420.19.5e-1640.13Ribosomal protein L12 family protein [more]
AT4G37660.12.1e-1038.36Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family pr... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000206Ribosomal protein L7/L12TIGRFAMTIGR00855TIGR00855coord: 68..190
e-value: 1.1E-32
score: 111.0
IPR000206Ribosomal protein L7/L12PANTHERPTHR4598739S RIBOSOMAL PROTEIN L12coord: 1..190
IPR000206Ribosomal protein L7/L12HAMAPMF_00368Ribosomal_L7_L12coord: 58..191
score: 22.621347
IPR000206Ribosomal protein L7/L12CDDcd00387Ribosomal_L7_L12coord: 61..190
e-value: 3.31141E-39
score: 128.812
IPR013823Ribosomal protein L7/L12, C-terminalPFAMPF00542Ribosomal_L12coord: 124..190
e-value: 4.6E-24
score: 84.6
IPR008932Ribosomal protein L7/L12, oligomerisationPFAMPF16320Ribosomal_L12_Ncoord: 63..110
e-value: 1.3E-13
score: 50.4
IPR036235Ribosomal protein L7/L12, oligomerisation domain superfamilyGENE3D1.20.5.710Single helix bincoord: 63..119
e-value: 8.6E-14
score: 53.3
IPR036235Ribosomal protein L7/L12, oligomerisation domain superfamilySUPERFAMILY48300Ribosomal protein L7/12, oligomerisation (N-terminal) domaincoord: 63..126
IPR014719Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-likeGENE3D3.30.1390.10coord: 120..190
e-value: 1.3E-25
score: 91.2
IPR014719Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-likeSUPERFAMILY54736ClpS-likecoord: 119..190
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..28
NoneNo IPR availablePANTHERPTHR45987:SF1650S RIBOSOMAL PROTEIN L12-1, CHLOROPLASTIC-RELATEDcoord: 1..190

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy09g019590.1Lcy09g019590.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0005840 ribosome
molecular_function GO:0003735 structural constituent of ribosome