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Lcy09g019590 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATCTTCTTCTTCTTCTTCTTCCCCAAATTCTCTCTTCAGCTTCTTTCTCTGCAACAATGGCTTCCACTCTCTCCACCGCTTCTCTCCGATCCCCATCTTGTTCTTCATCCTCTTTCCCCTCAAATTCCTCCCATTCCCCAAAACCCACTTCCCTCAATTTCCCCTTTTCATTCTCCTCCACCAATCTCTCTCTCCGCCTTATTCATCTCCGCCCACTCTCCGCCACCGCCGTGCCGGAGAAAGTTTCAGGACTCGGCGATGACATCTCCAAATTGACGCTCGAAGAGGCTCGAATCCTCGTCGATTACCTCCAAGAGAAGCTCGGCGTTTCCGCCGCCGCCTTCGCCCCTGCCGCTGTCGCCGTCGCGCCCGGCGCCGCTGCCGGCGGAGACGATGCGGCCGCCGCCGTCGAGGAGAAGACGGAGTTCGATGTCGTCATTGAGGATGTGCCGAGTAATGCGAGGATTGCTGTGATTAAGTCTGTTAGGGCTTTGACGAGCTTGGCGTTGAAGGAGGCAAAGGAGCTGATTGAAGGTTTGCCGAAGAAGTTTAAAGAAGGGGTTTCGAAGGAGGAGGCGGAGGAGGCGAAGAAGCAGCTTGAAGAGGCTGGTGCGAAGATTGCTATTGTTTGATTTCCGCTGGTTAGTTTCTTCAATTCTTAAGGTTTACTTACAATTTAGGCATTCTGGTGGAATTAGATATGGGCTTATTTTTTTTTTATTGTTAACTGATGAAGAATTTTGTTGAAATTCCGTTAATGAATGCCTTCTTTTTTTTCTGATTTCGCCATTGCTGTGGCTCTGTCTGTATGCTCTGCTCTGTTGATTTTTCTTGCTCACAATGTGTTTGTTAAAATGCCAGCAAGAAGCTTTGCTTAGGAATTCTAGTGAAATTAGAGATGGGGTATTTTTCTTTCCATTGTTGATGAATAATTTAGTTGAAATTCTGTTAATGAATGCTCTTTGTTTTTCTTGAATTTGTTCTTTGAATTCGCCATTGCTGAAAGCTTTGTTTGGCTGCTCTGTTCTGTTGATATTTCTTGATCCTAATGTGTTTGTTAGATTGCCAAGAAGAAGCTTTGTTGTGCACATGAAATCTCTTTTCGTCTGAACTTCTATAACCTTCTTTTCTTTTTCGAGTTCAACAACATTTGGGGTGGGGATTCGAACCTCTGACCTCTCTTATTGAAGTATTTGTCAATTACCGATGAGTTATGTTTACTTTGGCAAACTTGTGTAACTTATATGCGGATCTGAATGAGTAAAATTTTGGCCAATAAAATACGACTTGTTGCATTCTAGATATTTATCTGACCTTAATCTATTTGAATGTTTCTGCTTCGAAATGTGAAATCTATGGTCAAATACTTGACATTTTGTAACGTAGTGCAAAAACCTATGTTTGATATGTGTAATTTAATTGTTTGAACTTAAAAAAAATTATTCAAGGTGGTCACCTCAAGTGATTGACAATTTTATAACGTTGGATGTTTGAGATAGACATTAAAAAAATTTGTATCTCTTTTAGTCATTAGGGATGATGCAAATATGTAGATCCACATCCAACCTTATTAAGAGACCGTCTTAAACTATGGTTTTGATATCCTCGAGACTATATAAATCTACATCGTATAAAAATCATAATCTTGGAACTAAACATAGGTTTGGAAAACTTACCATATTATGCAATACAAACACAATATAGAAACTCAAACTTCCACTCCCAGGTTTCGTTTCATAAACCTAAATTTATTATGCTGTTAGCCAATAAATGGTTGATTTTCTTTTCGTTTTTGGGTGTTGGTTGATTTTCTGTCTCATATGTTGAGTTTAATTTTTTGGGTTTATTATTATTATTATTATTACTATTATTATTATAAGTGGTTGGTTTTCTTTGCCTCATAGATTGAGTTCATCGTGTATGGTTTGCCAACAAAAACATAGTTTAACTGACATAAGATTTTTACAATATGTGGTTCAAACCCTCCATTCCCACATGTTGTCAAAAAGAAAAGGGAAAATCGTGTATGATTCAACTGTTCAATATGAAATCTATTTTTGAAGCTTAAAATGACAAAATAGTAAAGGTTCCATTGTCTTAAAGAGAAATTTTCTTGAAAGACGGAAGGAATAAGCAACACTGATCTATAAGTATTCTCAAGAATAATGAACATTTCTATCCATAAATGATTATGAATAAAATTTATGCATTGGAGAAAACTAAATTGACCTATCCAAAAAATGGGGAAAAAAAACTATAATGGCACAAGAAAAATAGAATCATTTGAGTTCAGGGGTGAATATGAGCATTAAACTTGACAGAAGAAAGTTAAAATGAGTATAACTCAGTGGTAATTGACATGCACTCTTTAGTTTAACAAACGTGAAGGTGGGTGATTCATTCATCATATAAAAGTTTATGATAGAATTTTATGTTTTTTATGTTCTACTTTTAAGAATTTGAGGTGTTCTCGTTTTACTCATAAACTCCTATTAGAATTAAAGACTAAAGTTATGCTTAAAAAGAATCATATGCTACAAATAATAATAATAGTAATAATAATAATAAAATATTGAAGGACCATTGTTTAGAAACACAATGATATATATATTTTGACAAAAATTTGTTTTAAAAAAGATTGACCATAACTATCATTTAAAATTGTACACATTTTTAATAAAAAAAAGAATTTGGCTAAACATATGATTTAGTTCTCAATATTTGACTGTTTTTTTAGTTTAGTTGTTATTGTTAATGATAAGTTTAGATGATATGATACTTAATAAGTTGGACTAAATTAATGTAAGTTAAAACTTTTTAAACAATATAGGACTCAACTAGAAAAGATAAAAAAAAGGAACTGAACGTCAGGGACTAAACACATATATTTAGAAAGAAAGAAAAAAATTTGAAACATGACCGTTTTCGAGGAGTGAACGAAAATTTAGAAACTAAAAAGAAAAACACATCATTTTTTGAAGGAGCATTTGCACATATAGCAAAAAAAAACACCAAACATATTGGGAAAATGGCAAAAATTAAAACTATTTGTAGAAATAGAATAGCACAAAGTGACCTTAAGTTACAAAAATACCATTTTTATCGGTAGCTATCTGATAGAAAAGATTATCAATATCTATCACTAATAGTCATTGATAAACTACGATTAATCAGAGTCTATCAGTGATAGACACTGATAGAAAGGATTATGCGGAGTCTATCAGTGTCTATCACCGATAGTCACTAATACATCGAATTAATCGGAGTCATCAGTGTAACATTGATAAAAAGGATTATACGGAGCCTATCAACATGATAGTCTACTAGTGTCTATCATTGATAGACACTAATACATCAAATTAATCAGAGTCTATGAGTGTACGGAGTCTATTGATAGTTTATCAATGTCAATTACTAATAGACTTCGATTAATCAGAGTCTATCAGTGATAGACATTAATAAAAAGGATTATACATAGTCTATCATCATGATAATTTATCAGTGTCTATCACTGATAGTCACTAATAGACTTCAATTAATTGGAATCTATCACTGATAGACTTTGATTATCAAAGTTTATTAATGATAAACACCGATGGAAGGAAATATACTTAAATTGGTAGAATTTGCACACAATTCAAAATTAAATAGAGGTAAAACGGAAATTATGAAATTTTATTCTAATAAATTGTCATATTTACTATTATTTTTAGGGGCAACAAGAAAGGTGACTAAAAATAATTAGTAGGCTTGAAAAATGGCTACACAAGTTTATAAATTAAATGGATGGCTAAACGATTTTATGATTAATAAATTCCTATTTATAGAAGACGTAAATGCCCCTAACAAATTGTCTAAGGTGTTCCTAACGTTAAAAACTAAAATCAGAGTTTATGAGAGAGAAAATACCCCCTAACAAAGTTAGAGAGATTCTAGGAAGTTTGAAATAAAAAATCCAAGAAGCCAACCAAAAATTTGAAACTCTAGATTTACCATCTTCTTAAGAACTGTTTTCTGGAAAAAAGACACAAGGCGGCGAACACAAAAATTCGTACCTTTATTAGGAGAAAAAATGCAAAAAATGAACCCCCTCCAGGAGAAAAATTTCAACGCATTAAATGGAAGAACGCAAGAAGTAATACATTTTTAGCTACACCAAGAGCACGAAAACTGCAGAATTAAAAGCTTAAGAAAGAAAATATCTCCTATTCTTGCAAAGAGGAACTGAAAAATGGAAGAAGAAAGGAGAATTGTACTTTTATGCATTCCTTCACACTCTGTTGTATCACATTACCACCCTATCGACGACGAGCCTCCCTCCGACAATCGGCCGAAAAATCTTCTCCTCCTCCCGCTTGAAAACCGCTCGCTCATTGAAGCTTCTTCTCGACGACGACTGCCAGCAAAGATTTTTTGAAGATGAGAGATCGAAGGTATATAAATAACGGCTGGATTTTGCTTTTATTTGAAACTATTTTATAGACAATCCCTTGATTTTAGGGATTTGTTTTTGTTTTTTTGGGCAATATTTCGTGATTTATGTGAAAAAGGCCAGTTACATCCCCCAGGACCGTGCAAGGAAAAAAAAAAAAAGAACAAACGGATTAAGAAAGATGTAGTTGAAGAAGTTGACCCCGTCAGAGCGGTATGTACTGATATATACATATATTATTTACACCGTTTATGACCTGTTTGTGTATACTGGAGCCTAAAATTGAGATATATGTATCTGGATATAACTTTGTCCTATGTATTGAAGGGTGAAAGTGTGTTGGAATGCCTATTGAATGACACTCTGTTGTCTGTCTGTACTATTATATACATGCATATTAGTCATGCCAGTATATAAGTTGTGTGCCTCTCCCCTACTTTATAGACAATCCCTTGATTTTAGGGAATTTTTTTTGGCAATATTTCGTGATTTGTGTGAAAAAGGTCAACTACATCCACCTCCTTGTGACATGTTATTATAATTTGATTGTTTTTTATTGTGAAAATCCCTCAGGATGCTGTTAAGAAGGACCCTGCAAGGAAAAACAAAAAAAAAAAAAAGAACAAACGGGTTAAGAAAGATGTAGTTGAAGAAGTTGACCCCGTCAGAGTGGTATGTACTGATATATATACATATATTCATTACATCGTTTATGACCTGCTTGTGTGTATTGGAGCCTAAAATTGAGATGTATGTATCTGGATATAACTTTGTCCTATGTATTGAAGGGTGAAAGTGTGCTGGAATGCCTATTGAATGACACTTTGTTGTCTGTCTATACTATTATATACATGCATATTAGTCATGCCAGTATATAAGTTGTGTGCCCCACCCCACCCCACACCCCCACCCCACACCACCACAATGTATATACAGACGTCTATCTTGAATGTTTA ATCTTCTTCTTCTTCTTCTTCCCCAAATTCTCTCTTCAGCTTCTTTCTCTGCAACAATGGCTTCCACTCTCTCCACCGCTTCTCTCCGATCCCCATCTTGTTCTTCATCCTCTTTCCCCTCAAATTCCTCCCATTCCCCAAAACCCACTTCCCTCAATTTCCCCTTTTCATTCTCCTCCACCAATCTCTCTCTCCGCCTTATTCATCTCCGCCCACTCTCCGCCACCGCCGTGCCGGAGAAAGTTTCAGGACTCGGCGATGACATCTCCAAATTGACGCTCGAAGAGGCTCGAATCCTCGTCGATTACCTCCAAGAGAAGCTCGGCGTTTCCGCCGCCGCCTTCGCCCCTGCCGCTGTCGCCGTCGCGCCCGGCGCCGCTGCCGGCGGAGACGATGCGGCCGCCGCCGTCGAGGAGAAGACGGAGTTCGATGTCGTCATTGAGGATGTGCCGAGTAATGCGAGGATTGCTGTGATTAAGTCTGTTAGGGCTTTGACGAGCTTGGCGTTGAAGGAGGCAAAGGAGCTGATTGAAGGTTTGCCGAAGAAGTTTAAAGAAGGGGTTTCGAAGGAGGAGGCGGAGGAGGCGAAGAAGCAGCTTGAAGAGGCTGGTGCGAAGATTGCTATTGTTTGATTTCCGCTGGATGCTGTTAAGAAGGACCCTGCAAGGAAAAACAAAAAAAAAAAAAAGAACAAACGGGTTAAGAAAGATGTAGTTGAAGAAGTTGACCCCGTCAGAGTGGTATGTACTGATATATATACATATATTCATTACATCGTTTATGACCTGCTTGTGTGTATTGGAGCCTAAAATTGAGATGTATGTATCTGGATATAACTTTGTCCTATGTATTGAAGGGTGAAAGTGTGCTGGAATGCCTATTGAATGACACTTTGTTGTCTGTCTATACTATTATATACATGCATATTAGTCATGCCAGTATATAAGTTGTGTGCCCCACCCCACCCCACACCCCCACCCCACACCACCACAATGTATATACAGACGTCTATCTTGAATGTTTA ATGGCTTCCACTCTCTCCACCGCTTCTCTCCGATCCCCATCTTGTTCTTCATCCTCTTTCCCCTCAAATTCCTCCCATTCCCCAAAACCCACTTCCCTCAATTTCCCCTTTTCATTCTCCTCCACCAATCTCTCTCTCCGCCTTATTCATCTCCGCCCACTCTCCGCCACCGCCGTGCCGGAGAAAGTTTCAGGACTCGGCGATGACATCTCCAAATTGACGCTCGAAGAGGCTCGAATCCTCGTCGATTACCTCCAAGAGAAGCTCGGCGTTTCCGCCGCCGCCTTCGCCCCTGCCGCTGTCGCCGTCGCGCCCGGCGCCGCTGCCGGCGGAGACGATGCGGCCGCCGCCGTCGAGGAGAAGACGGAGTTCGATGTCGTCATTGAGGATGTGCCGAGTAATGCGAGGATTGCTGTGATTAAGTCTGTTAGGGCTTTGACGAGCTTGGCGTTGAAGGAGGCAAAGGAGCTGATTGAAGGTTTGCCGAAGAAGTTTAAAGAAGGGGTTTCGAAGGAGGAGGCGGAGGAGGCGAAGAAGCAGCTTGAAGAGGCTGGTGCGAAGATTGCTATTGTTTGA MASTLSTASLRSPSCSSSSFPSNSSHSPKPTSLNFPFSFSSTNLSLRLIHLRPLSATAVPEKVSGLGDDISKLTLEEARILVDYLQEKLGVSAAAFAPAAVAVAPGAAAGGDDAAAAVEEKTEFDVVIEDVPSNARIAVIKSVRALTSLALKEAKELIEGLPKKFKEGVSKEEAEEAKKQLEEAGAKIAIV Homology
BLAST of Lcy09g019590 vs. ExPASy Swiss-Prot
Match: P24929 (50S ribosomal protein L12, chloroplastic OS=Nicotiana tabacum OX=4097 GN=RPL12 PE=1 SV=1) HSP 1 Score: 198.0 bits (502), Expect = 9.8e-50 Identity = 130/190 (68.42%), Postives = 151/190 (79.47%), Query Frame = 0
BLAST of Lcy09g019590 vs. ExPASy Swiss-Prot
Match: P36688 (50S ribosomal protein L12, chloroplastic OS=Nicotiana sylvestris OX=4096 PE=2 SV=1) HSP 1 Score: 197.6 bits (501), Expect = 1.3e-49 Identity = 129/190 (67.89%), Postives = 150/190 (78.95%), Query Frame = 0
BLAST of Lcy09g019590 vs. ExPASy Swiss-Prot
Match: P02398 (50S ribosomal protein L12, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL12 PE=1 SV=2) HSP 1 Score: 194.1 bits (492), Expect = 1.4e-48 Identity = 122/194 (62.89%), Postives = 150/194 (77.32%), Query Frame = 0
BLAST of Lcy09g019590 vs. ExPASy Swiss-Prot
Match: P36212 (50S ribosomal protein L12-3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL12C PE=2 SV=2) HSP 1 Score: 189.9 bits (481), Expect = 2.7e-47 Identity = 125/192 (65.10%), Postives = 149/192 (77.60%), Query Frame = 0
BLAST of Lcy09g019590 vs. ExPASy Swiss-Prot
Match: P36210 (50S ribosomal protein L12-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL12A PE=2 SV=1) HSP 1 Score: 182.6 bits (462), Expect = 4.3e-45 Identity = 121/195 (62.05%), Postives = 150/195 (76.92%), Query Frame = 0
BLAST of Lcy09g019590 vs. ExPASy TrEMBL
Match: A0A6J1DD25 (50S ribosomal protein L12, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111019918 PE=3 SV=1) HSP 1 Score: 287.7 bits (735), Expect = 3.5e-74 Identity = 169/191 (88.48%), Postives = 178/191 (93.19%), Query Frame = 0
BLAST of Lcy09g019590 vs. ExPASy TrEMBL
Match: A0A5A7UJJ4 (50S ribosomal protein L12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1545G00330 PE=3 SV=1) HSP 1 Score: 286.2 bits (731), Expect = 1.0e-73 Identity = 170/193 (88.08%), Postives = 180/193 (93.26%), Query Frame = 0
BLAST of Lcy09g019590 vs. ExPASy TrEMBL
Match: A0A1S3B8B3 (50S ribosomal protein L12, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103487096 PE=3 SV=1) HSP 1 Score: 286.2 bits (731), Expect = 1.0e-73 Identity = 170/193 (88.08%), Postives = 180/193 (93.26%), Query Frame = 0
BLAST of Lcy09g019590 vs. ExPASy TrEMBL
Match: A0A6J1JLN3 (50S ribosomal protein L12, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111486322 PE=3 SV=1) HSP 1 Score: 284.6 bits (727), Expect = 3.0e-73 Identity = 169/191 (88.48%), Postives = 179/191 (93.72%), Query Frame = 0
BLAST of Lcy09g019590 vs. ExPASy TrEMBL
Match: A0A0A0LHZ4 (Ribosomal protein L12-C OS=Cucumis sativus OX=3659 GN=Csa_3G837570 PE=3 SV=1) HSP 1 Score: 284.6 bits (727), Expect = 3.0e-73 Identity = 166/191 (86.91%), Postives = 176/191 (92.15%), Query Frame = 0
BLAST of Lcy09g019590 vs. NCBI nr
Match: XP_038903222.1 (50S ribosomal protein L12, chloroplastic-like [Benincasa hispida]) HSP 1 Score: 290.8 bits (743), Expect = 8.5e-75 Identity = 169/191 (88.48%), Postives = 180/191 (94.24%), Query Frame = 0
BLAST of Lcy09g019590 vs. NCBI nr
Match: XP_022152130.1 (50S ribosomal protein L12, chloroplastic-like [Momordica charantia]) HSP 1 Score: 287.7 bits (735), Expect = 7.2e-74 Identity = 169/191 (88.48%), Postives = 178/191 (93.19%), Query Frame = 0
BLAST of Lcy09g019590 vs. NCBI nr
Match: XP_008443526.1 (PREDICTED: 50S ribosomal protein L12, chloroplastic-like [Cucumis melo] >KAA0053661.1 50S ribosomal protein L12 [Cucumis melo var. makuwa] >TYK00831.1 50S ribosomal protein L12 [Cucumis melo var. makuwa]) HSP 1 Score: 286.2 bits (731), Expect = 2.1e-73 Identity = 170/193 (88.08%), Postives = 180/193 (93.26%), Query Frame = 0
BLAST of Lcy09g019590 vs. NCBI nr
Match: KAG6588957.1 (50S ribosomal protein L12-1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 285.4 bits (729), Expect = 3.6e-73 Identity = 168/191 (87.96%), Postives = 180/191 (94.24%), Query Frame = 0
BLAST of Lcy09g019590 vs. NCBI nr
Match: KAG7022725.1 (50S ribosomal protein L12, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 285.0 bits (728), Expect = 4.7e-73 Identity = 167/191 (87.43%), Postives = 180/191 (94.24%), Query Frame = 0
BLAST of Lcy09g019590 vs. TAIR 10
Match: AT3G27850.1 (ribosomal protein L12-C ) HSP 1 Score: 189.9 bits (481), Expect = 1.9e-48 Identity = 125/192 (65.10%), Postives = 149/192 (77.60%), Query Frame = 0
BLAST of Lcy09g019590 vs. TAIR 10
Match: AT3G27830.1 (ribosomal protein L12-A ) HSP 1 Score: 182.6 bits (462), Expect = 3.0e-46 Identity = 121/195 (62.05%), Postives = 150/195 (76.92%), Query Frame = 0
BLAST of Lcy09g019590 vs. TAIR 10
Match: AT3G27840.1 (ribosomal protein L12-B ) HSP 1 Score: 167.9 bits (424), Expect = 7.7e-42 Identity = 110/193 (56.99%), Postives = 136/193 (70.47%), Query Frame = 0
BLAST of Lcy09g019590 vs. TAIR 10
Match: AT4G36420.1 (Ribosomal protein L12 family protein ) HSP 1 Score: 81.3 bits (199), Expect = 9.5e-16 Identity = 63/157 (40.13%), Postives = 94/157 (59.87%), Query Frame = 0
BLAST of Lcy09g019590 vs. TAIR 10
Match: AT4G37660.1 (Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein ) HSP 1 Score: 63.5 bits (153), Expect = 2.1e-10 Identity = 56/146 (38.36%), Postives = 78/146 (53.42%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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