Lcy09g019380 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy09g019380
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	F-box domain-containing protein
Location	Chr09: 43743000 .. 43743629 (+)
RNA-Seq Expression	Lcy09g019380
Synteny	Lcy09g019380

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCATTTAATACGGTAGTAGAGGAAGTGGAGGTTTTCGCATATGGCCCGAGTTCGAACAAATGGAAGAGTGTTCCCTTCTCGCTGCGTCTCGAGATCAACGACGATGGTGTTTACTTGAATGGAGCCCTTTTCTGGATTGGATGTTATAATGTAGAACTGGAATCCAGTTATAAGAACGTCCTCGTATGTTTCGACGTGGAAGAGGAGAGATTCAAGGAAATTTCTTTTCCCCAAGCTGGGAAAGATGGGAAGAGAAATTCTTTAGCCATTAGGGTTTTTGATAGCCATCTCTATCTCTCTATCTTTGAGATGGAATGTTTTGGATACCATGTGTGGAAAATGGAAGAAGAAGATTTGTGGATTAAGGAATTTGTTATTGCAATGCCAATTTGTCGTTATTATGATGTGTATTGGAGGCCTTATGATGTGCAAATCATCGAAACTTTGGAAGATGGGAAGATGTTGTGTCTGATTTCGAGAATGAATTTAATCTTGTATGATCCGAAGACTGTGAGGTCAAAGGCATTGTTTGAATTGTCGGATGAAATTAGGGAAGAATTGTGGATTTATCAAATTCAATCCTTCAATTTTGATCCTCTCTCCAAGATTCTGGCGGGAGATGTTTGA

mRNA sequence

ATGCCATTTAATACGGTAGTAGAGGAAGTGGAGGTTTTCGCATATGGCCCGAGTTCGAACAAATGGAAGAGTGTTCCCTTCTCGCTGCGTCTCGAGATCAACGACGATGGTGTTTACTTGAATGGAGCCCTTTTCTGGATTGGATGTTATAATGTAGAACTGGAATCCAGTTATAAGAACGTCCTCGTATGTTTCGACGTGGAAGAGGAGAGATTCAAGGAAATTTCTTTTCCCCAAGCTGGGAAAGATGGGAAGAGAAATTCTTTAGCCATTAGGGTTTTTGATAGCCATCTCTATCTCTCTATCTTTGAGATGGAATGTTTTGGATACCATGTGTGGAAAATGGAAGAAGAAGATTTGTGGATTAAGGAATTTGTTATTGCAATGCCAATTTGTCGTTATTATGATGTGTATTGGAGGCCTTATGATGTGCAAATCATCGAAACTTTGGAAGATGGGAAGATGTTGTGTCTGATTTCGAGAATGAATTTAATCTTGTATGATCCGAAGACTGTGAGGTCAAAGGCATTGTTTGAATTGTCGGATGAAATTAGGGAAGAATTGTGGATTTATCAAATTCAATCCTTCAATTTTGATCCTCTCTCCAAGATTCTGGCGGGAGATGTTTGA

Coding sequence (CDS)

ATGCCATTTAATACGGTAGTAGAGGAAGTGGAGGTTTTCGCATATGGCCCGAGTTCGAACAAATGGAAGAGTGTTCCCTTCTCGCTGCGTCTCGAGATCAACGACGATGGTGTTTACTTGAATGGAGCCCTTTTCTGGATTGGATGTTATAATGTAGAACTGGAATCCAGTTATAAGAACGTCCTCGTATGTTTCGACGTGGAAGAGGAGAGATTCAAGGAAATTTCTTTTCCCCAAGCTGGGAAAGATGGGAAGAGAAATTCTTTAGCCATTAGGGTTTTTGATAGCCATCTCTATCTCTCTATCTTTGAGATGGAATGTTTTGGATACCATGTGTGGAAAATGGAAGAAGAAGATTTGTGGATTAAGGAATTTGTTATTGCAATGCCAATTTGTCGTTATTATGATGTGTATTGGAGGCCTTATGATGTGCAAATCATCGAAACTTTGGAAGATGGGAAGATGTTGTGTCTGATTTCGAGAATGAATTTAATCTTGTATGATCCGAAGACTGTGAGGTCAAAGGCATTGTTTGAATTGTCGGATGAAATTAGGGAAGAATTGTGGATTTATCAAATTCAATCCTTCAATTTTGATCCTCTCTCCAAGATTCTGGCGGGAGATGTTTGA

Protein sequence

MPFNTVVEEVEVFAYGPSSNKWKSVPFSLRLEINDDGVYLNGALFWIGCYNVELESSYKNVLVCFDVEEERFKEISFPQAGKDGKRNSLAIRVFDSHLYLSIFEMECFGYHVWKMEEEDLWIKEFVIAMPICRYYDVYWRPYDVQIIETLEDGKMLCLISRMNLILYDPKTVRSKALFELSDEIREELWIYQIQSFNFDPLSKILAGDV

Homology

[Close]

BLAST of Lcy09g019380 vs. ExPASy Swiss-Prot
Match: Q1KS79 (F-box protein At2g23160 OS=Arabidopsis thaliana OX=3702 GN=At2g23160 PE=2 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 1.2e-05
Identity = 22/66 (33.33%), Postives = 38/66 (57.58%), Query Frame = 0


Query: 11  EVFAYGPSSNKWKSVPFSLRLEINDDGVYLNGALFWIG----CYNVELESSYKNVLVCFD 70
           ++   G  + KW+++  SLR EI  +GV +NG L+++G      N + +  Y   +VCFD
Sbjct: 181 KILTVGTGNMKWRTIRCSLRYEIVSEGVSINGVLYYLGETSAWDNKDYDLKYDYAIVCFD 240

Query: 71  VEEERF 73
           +  E+F
Sbjct: 241 IRSEKF 246

[Close]

BLAST of Lcy09g019380 vs. ExPASy Swiss-Prot
Match: Q8S8C7 (Putative F-box protein At2g16220 OS=Arabidopsis thaliana OX=3702 GN=At2g16220 PE=4 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 4.7e-05
Identity = 29/118 (24.58%), Postives = 54/118 (45.76%), Query Frame = 0


Query: 11  EVFAYGPSSNKWKSVPFSLRLEINDDGVYLNGALFWIG---CYNVELESSYKNVLVCFDV 70
           ++  +G     WK + + +  +I   G+ +NG L+++G    ++ + + +  NVLVCFD+
Sbjct: 177 KILTFGDGDMNWKKIKYRVLHDIYSQGICINGVLYYLGDTSDWDNDHDVTSGNVLVCFDL 236

Query: 71  EEERFKEISFPQAGKDGKRNSLAIRVFDSHLYLSIFEMECFGYHVWKME--EEDLWIK 124
             E F  I          +  LA+  +D      + +      HVW +E  E+  W K
Sbjct: 237 RSESFTFIGLECGQLINYKGKLAVIFWDDVDDDDVKDDAIDEMHVWVLEDVEKKEWSK 294

[Close]

BLAST of Lcy09g019380 vs. ExPASy Swiss-Prot
Match: Q9SIV7 (F-box protein At2g16450 OS=Arabidopsis thaliana OX=3702 GN=At2g16450 PE=2 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 6.8e-04
Identity = 23/68 (33.82%), Postives = 36/68 (52.94%), Query Frame = 0


Query: 12  VFAYGPSSNKWKSVPFSLRLEINDDGVYLNGALFWIG-------CYNVELESSYKNVLVC 71
           V  +G    KW+ +  SLR +I  +GV +NG L+++G            + S Y  ++VC
Sbjct: 188 VITFGAGDLKWRRIKCSLRHDIKSEGVCINGVLYYLGDTSDWSRVNGNHVTSGY--MIVC 247

Query: 72  FDVEEERF 73
           FDV  E+F
Sbjct: 248 FDVRSEKF 253

[Close]

BLAST of Lcy09g019380 vs. ExPASy TrEMBL
Match: A0A0A0M1M5 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G572960 PE=4 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 6.8e-31
Identity = 82/202 (40.59%), Postives = 120/202 (59.41%), Query Frame = 0


Query: 10  VEVFAYGPSSNKWKSVPFSLRLEINDDGVYLNGALFWIGCYNVELE--SSYKNVLVCFDV 69
           V++FA+G +S +W  V           GVYLNG L+W+G   +     S Y  V+   D+
Sbjct: 186 VDIFAFG-TSCEWTPVGSVPNFLNEYHGVYLNGGLYWVGSQKLPNGGISDYTEVIYRLDL 245

Query: 70  EEERFKEISFPQAGKDGKRNSLAIRVFDSHLYLSIFEMECFGYHVWKMEEEDLWIKEFVI 129
           ++E+F++ISFP  G D       I V++  LYL+ F  E F YH WKMEE+  W KEFV+
Sbjct: 246 KDEKFEKISFPLDGGDDP----YIAVYNGTLYLT-FCCEDFDYHAWKMEEDFSWSKEFVL 305

Query: 130 AMPICRYYDVYWRP--YDVQIIETLEDGKMLCLISRMNLILYDPKTVRSKALFELSDEIR 189
           A+P   ++ +   P  Y +Q+I+  EDG +LCL + + LILYDP T   + L     EI+
Sbjct: 306 ALPENVHHSLRHHPIGYYLQLIKFCEDGNILCLYAGILLILYDPSTQTVEILTNQDFEIK 365

Query: 190 EELWIYQIQSFNFDPLSKILAG 208
           E +W++QI+SF+F+ L  ILAG
Sbjct: 366 EAMWVHQIESFSFNSLHNILAG 381

[Close]

BLAST of Lcy09g019380 vs. ExPASy TrEMBL
Match: A0A6J1CQE2 (F-box/kelch-repeat protein At3g06240-like OS=Momordica charantia OX=3673 GN=LOC111013202 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 3.2e-28
Identity = 82/203 (40.39%), Postives = 119/203 (58.62%), Query Frame = 0


Query: 10  VEVFAYGPS--SNKWKSVPFSLRLEINDDGVYLNGALFWIGCYNVELESSYKNVLVCFDV 69
           +E F +G +  S     VP S+ +E  +  VY NG+L+WIG    +      NVL   D+
Sbjct: 190 LETFTFGTNCKSTYVSCVPSSMSME--EHSVYFNGSLYWIG----KQLKHPTNVLYRLDI 249

Query: 70  EEERFKEISFPQAGKDGKRNSLAIRVFDSHLYLSIFEMECFGYHVWKMEEEDLWIKEFVI 129
           E+E  +EISFPQ+G        +I VF+  LYL++ +     YHVWKMEE+  W K F +
Sbjct: 250 EKEELQEISFPQSG-----GCCSIGVFNGSLYLTLAQGRYHAYHVWKMEEDFSWTKAFDV 309

Query: 130 AMPICRYYDVYWRPYD--VQIIETLEDGKMLCLISRMNLILYDPKTVRSKALFELSDEIR 189
            +P  + Y  + R YD  +Q+I   +DGK+LCLIS ++LILY+ KT R ++L      I+
Sbjct: 310 LLP--KIYVHHRRLYDSQLQLIRACDDGKILCLISGLDLILYNSKTQRMESLTYQHLNIK 369

Query: 190 EELWIYQIQSFNFDPLSKILAGD 209
           +   +++I SFNFD L KIL GD
Sbjct: 370 K---VHRIDSFNFDSLHKILTGD 376

[Close]

BLAST of Lcy09g019380 vs. ExPASy TrEMBL
Match: A0A5D3CM94 (Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G006720 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 3.5e-27
Identity = 76/203 (37.44%), Postives = 113/203 (55.67%), Query Frame = 0


Query: 10  VEVFAYGPSSNKWKSVPFSLRLEINDDGVYLNGALFWIGCYNVELESSYKNVLVCFDVEE 69
           VE+FA+G +   W SV F   L + D GVY NG L+W+       +SS  + +   D+E 
Sbjct: 186 VEIFAFGSTYQVWTSVGFLPSLVVEDHGVYFNGGLYWVANQPDPHDSSI-STIYRLDIEN 245

Query: 70  ERFKEISFPQAGKDGKRNSLAIRVFDSHLYLSIFEMECFGYHVWKMEEEDLWIKEFVIAM 129
           E  ++IS PQ             VFD  LYL++ +     Y VWKM++   WIK FVI+ 
Sbjct: 246 ENLEKISCPQ----HLGGHFFFGVFDGTLYLTVSKNN--KYQVWKMKDNFSWIKAFVISS 305

Query: 130 P--ICR--YYDVYWRPYDVQIIETLEDGKMLCLISRMNLILYDPKTVRSKALFELSDEIR 189
           P  +C   +    W    +  I+  EDGK+LCL++ ++LILYDPKT  ++ L + S ++ 
Sbjct: 306 PRNLCHPDHPHQPWGVSQLDPIKACEDGKILCLLAGLHLILYDPKTKSAEILTDQSVKVE 365

Query: 190 EELWIYQIQSFNFDPLSKILAGD 209
           + L ++ I SFNF+ L  ILAG+
Sbjct: 366 KHLHVHHIDSFNFNSLPNILAGN 381

[Close]

BLAST of Lcy09g019380 vs. ExPASy TrEMBL
Match: A0A1S3B0Q6 (putative F-box protein At3g21120 OS=Cucumis melo OX=3656 GN=LOC103484583 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 7.8e-27
Identity = 76/203 (37.44%), Postives = 112/203 (55.17%), Query Frame = 0


Query: 10  VEVFAYGPSSNKWKSVPFSLRLEINDDGVYLNGALFWIGCYNVELESSYKNVLVCFDVEE 69
           VE+FA+G     W SV F   L + D GVY NG L+W+       +SS  + +   D+E 
Sbjct: 186 VEIFAFGSIYQVWTSVGFLPSLVVEDHGVYFNGGLYWVANQPDPHDSSI-STIYRLDIEN 245

Query: 70  ERFKEISFPQAGKDGKRNSLAIRVFDSHLYLSIFEMECFGYHVWKMEEEDLWIKEFVIAM 129
           E  ++IS PQ             VFD  LYL++ +     Y VWKM++   WIK FVI+ 
Sbjct: 246 ENLEKISCPQ----HLGGHFFFGVFDGTLYLTVSKNN--KYQVWKMKDNFSWIKAFVISS 305

Query: 130 P--ICR--YYDVYWRPYDVQIIETLEDGKMLCLISRMNLILYDPKTVRSKALFELSDEIR 189
           P  +C   +    W    +  I+  EDGK+LCL++ ++LILYDPKT  ++ L + S ++ 
Sbjct: 306 PRNLCHPDHPHQPWGVSQLDPIKACEDGKILCLLAGLHLILYDPKTKSAEILTDQSVKVE 365

Query: 190 EELWIYQIQSFNFDPLSKILAGD 209
           + L ++ I SFNF+ L  ILAG+
Sbjct: 366 KHLHVHHIDSFNFNSLPNILAGN 381

[Close]

BLAST of Lcy09g019380 vs. ExPASy TrEMBL
Match: A0A5D3CIX9 (Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G003440 PE=4 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 1.0e-26
Identity = 76/208 (36.54%), Postives = 120/208 (57.69%), Query Frame = 0


Query: 10  VEVFAYGPSSNKWKSVPFSLRLEINDDGVYLNGALFWIGCY----NVELESSYKNVLVCF 69
           V++FA+G +S +W  +           GVY NG L+W+G      N  L S Y  V+   
Sbjct: 185 VDIFAFG-TSCEWTPIGSVPNFLNEYHGVYFNGGLYWVGSQKQLPNGGL-SDYTGVVYRL 244

Query: 70  DVEEERFKEISFPQAGKDGKRNSLAIRVFDSHLYLSIFEMECFGYHVWKMEEEDLWIKEF 129
           D+ +E+FK+IS P  G +       + V++  LYL++   E F YHVWKM+E+  W KEF
Sbjct: 245 DLNDEKFKKISIPFGGDEP-----YVGVYNGTLYLTLC-CEDFDYHVWKMKEDFSWSKEF 304

Query: 130 VIAMP------ICRYYDVYWRPYDVQIIETLEDGKMLCLISRMNLILYDPKTVRSKALFE 189
           V+A+P      + R++ +    Y +Q+++  EDG +LCL + + LI+YDPKT + + L +
Sbjct: 305 VLALPENILHSLHRHHPI---GYYLQLVKFCEDGSILCLCAGILLIVYDPKTQQMEILTD 364

Query: 190 LSDEIREELWIYQIQSFNFDPLSKILAG 208
              EI+E +W +QI+SF+F+ L   L G
Sbjct: 365 QDFEIKEGMWFHQIESFSFNSLHNTLTG 381

[Close]

BLAST of Lcy09g019380 vs. NCBI nr
Match: XP_038880514.1 (putative F-box protein At1g46984 [Benincasa hispida])

HSP 1 Score: 149.4 bits (376), Expect = 3.3e-32
Identity = 86/207 (41.55%), Postives = 130/207 (62.80%), Query Frame = 0


Query: 10  VEVFAYGPSSNKWK---SVPFSLRLEINDDGVYLNGALFWIGCYNVELESSYKNVLVCFD 69
           VE+FA+G +S +W    SVP+ L       GVY NG L+W+G   +   +   +V+   D
Sbjct: 186 VEIFAFG-TSCEWTPVGSVPYFLN---EYHGVYFNGGLYWVGGQQLP-NAGLSDVIYRLD 245

Query: 70  VEEERFKEISFPQAGKDGKRNSLAIRVFDSHLYLSIFEMECFGYHVWKMEEEDLWIKEFV 129
           +E+++FK+ISFP  G D + +   I V++  LYL++   + F YHVWKMEE+  WIKEFV
Sbjct: 246 LEDDKFKQISFPLDG-DDEGDFPYIGVYNDTLYLTLCCGD-FEYHVWKMEEDFSWIKEFV 305

Query: 130 IAMP------ICRYYDVYWRPYDVQIIETLEDGKMLCLISRMNLILYDPKTVRSKALFEL 189
           +A+P      + R++ +    Y +Q+I+  EDG +LCL + + LILYDPKT  ++ L + 
Sbjct: 306 LALPENVHHSLPRHHPI---GYCLQLIKACEDGNILCLCAGLYLILYDPKTETTELLTDQ 365

Query: 190 SDEIREELWIYQIQSFNFDPLSKILAG 208
             EI++ +W+YQI SFNF+ L  ILAG
Sbjct: 366 DFEIKKHMWVYQIDSFNFNSLHNILAG 382

[Close]

BLAST of Lcy09g019380 vs. NCBI nr
Match: XP_004135796.1 (putative F-box protein At1g46984 [Cucumis sativus] >KGN66126.1 hypothetical protein Csa_007182 [Cucumis sativus])

HSP 1 Score: 144.1 bits (362), Expect = 1.4e-30
Identity = 82/202 (40.59%), Postives = 120/202 (59.41%), Query Frame = 0


Query: 10  VEVFAYGPSSNKWKSVPFSLRLEINDDGVYLNGALFWIGCYNVELE--SSYKNVLVCFDV 69
           V++FA+G +S +W  V           GVYLNG L+W+G   +     S Y  V+   D+
Sbjct: 186 VDIFAFG-TSCEWTPVGSVPNFLNEYHGVYLNGGLYWVGSQKLPNGGISDYTEVIYRLDL 245

Query: 70  EEERFKEISFPQAGKDGKRNSLAIRVFDSHLYLSIFEMECFGYHVWKMEEEDLWIKEFVI 129
           ++E+F++ISFP  G D       I V++  LYL+ F  E F YH WKMEE+  W KEFV+
Sbjct: 246 KDEKFEKISFPLDGGDDP----YIAVYNGTLYLT-FCCEDFDYHAWKMEEDFSWSKEFVL 305

Query: 130 AMPICRYYDVYWRP--YDVQIIETLEDGKMLCLISRMNLILYDPKTVRSKALFELSDEIR 189
           A+P   ++ +   P  Y +Q+I+  EDG +LCL + + LILYDP T   + L     EI+
Sbjct: 306 ALPENVHHSLRHHPIGYYLQLIKFCEDGNILCLYAGILLILYDPSTQTVEILTNQDFEIK 365

Query: 190 EELWIYQIQSFNFDPLSKILAG 208
           E +W++QI+SF+F+ L  ILAG
Sbjct: 366 EAMWVHQIESFSFNSLHNILAG 381

[Close]

BLAST of Lcy09g019380 vs. NCBI nr
Match: XP_022143297.1 (F-box/kelch-repeat protein At3g06240-like [Momordica charantia])

HSP 1 Score: 135.2 bits (339), Expect = 6.5e-28
Identity = 82/203 (40.39%), Postives = 119/203 (58.62%), Query Frame = 0


Query: 10  VEVFAYGPS--SNKWKSVPFSLRLEINDDGVYLNGALFWIGCYNVELESSYKNVLVCFDV 69
           +E F +G +  S     VP S+ +E  +  VY NG+L+WIG    +      NVL   D+
Sbjct: 190 LETFTFGTNCKSTYVSCVPSSMSME--EHSVYFNGSLYWIG----KQLKHPTNVLYRLDI 249

Query: 70  EEERFKEISFPQAGKDGKRNSLAIRVFDSHLYLSIFEMECFGYHVWKMEEEDLWIKEFVI 129
           E+E  +EISFPQ+G        +I VF+  LYL++ +     YHVWKMEE+  W K F +
Sbjct: 250 EKEELQEISFPQSG-----GCCSIGVFNGSLYLTLAQGRYHAYHVWKMEEDFSWTKAFDV 309

Query: 130 AMPICRYYDVYWRPYD--VQIIETLEDGKMLCLISRMNLILYDPKTVRSKALFELSDEIR 189
            +P  + Y  + R YD  +Q+I   +DGK+LCLIS ++LILY+ KT R ++L      I+
Sbjct: 310 LLP--KIYVHHRRLYDSQLQLIRACDDGKILCLISGLDLILYNSKTQRMESLTYQHLNIK 369

Query: 190 EELWIYQIQSFNFDPLSKILAGD 209
           +   +++I SFNFD L KIL GD
Sbjct: 370 K---VHRIDSFNFDSLHKILTGD 376

[Close]

BLAST of Lcy09g019380 vs. NCBI nr
Match: TYK13067.1 (putative F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 131.7 bits (330), Expect = 7.2e-27
Identity = 76/203 (37.44%), Postives = 113/203 (55.67%), Query Frame = 0


Query: 10  VEVFAYGPSSNKWKSVPFSLRLEINDDGVYLNGALFWIGCYNVELESSYKNVLVCFDVEE 69
           VE+FA+G +   W SV F   L + D GVY NG L+W+       +SS  + +   D+E 
Sbjct: 186 VEIFAFGSTYQVWTSVGFLPSLVVEDHGVYFNGGLYWVANQPDPHDSSI-STIYRLDIEN 245

Query: 70  ERFKEISFPQAGKDGKRNSLAIRVFDSHLYLSIFEMECFGYHVWKMEEEDLWIKEFVIAM 129
           E  ++IS PQ             VFD  LYL++ +     Y VWKM++   WIK FVI+ 
Sbjct: 246 ENLEKISCPQ----HLGGHFFFGVFDGTLYLTVSKNN--KYQVWKMKDNFSWIKAFVISS 305

Query: 130 P--ICR--YYDVYWRPYDVQIIETLEDGKMLCLISRMNLILYDPKTVRSKALFELSDEIR 189
           P  +C   +    W    +  I+  EDGK+LCL++ ++LILYDPKT  ++ L + S ++ 
Sbjct: 306 PRNLCHPDHPHQPWGVSQLDPIKACEDGKILCLLAGLHLILYDPKTKSAEILTDQSVKVE 365

Query: 190 EELWIYQIQSFNFDPLSKILAGD 209
           + L ++ I SFNF+ L  ILAG+
Sbjct: 366 KHLHVHHIDSFNFNSLPNILAGN 381

[Close]

BLAST of Lcy09g019380 vs. NCBI nr
Match: XP_008439950.1 (PREDICTED: putative F-box protein At3g21120 [Cucumis melo])

HSP 1 Score: 130.6 bits (327), Expect = 1.6e-26
Identity = 76/203 (37.44%), Postives = 112/203 (55.17%), Query Frame = 0


Query: 10  VEVFAYGPSSNKWKSVPFSLRLEINDDGVYLNGALFWIGCYNVELESSYKNVLVCFDVEE 69
           VE+FA+G     W SV F   L + D GVY NG L+W+       +SS  + +   D+E 
Sbjct: 186 VEIFAFGSIYQVWTSVGFLPSLVVEDHGVYFNGGLYWVANQPDPHDSSI-STIYRLDIEN 245

Query: 70  ERFKEISFPQAGKDGKRNSLAIRVFDSHLYLSIFEMECFGYHVWKMEEEDLWIKEFVIAM 129
           E  ++IS PQ             VFD  LYL++ +     Y VWKM++   WIK FVI+ 
Sbjct: 246 ENLEKISCPQ----HLGGHFFFGVFDGTLYLTVSKNN--KYQVWKMKDNFSWIKAFVISS 305

Query: 130 P--ICR--YYDVYWRPYDVQIIETLEDGKMLCLISRMNLILYDPKTVRSKALFELSDEIR 189
           P  +C   +    W    +  I+  EDGK+LCL++ ++LILYDPKT  ++ L + S ++ 
Sbjct: 306 PRNLCHPDHPHQPWGVSQLDPIKACEDGKILCLLAGLHLILYDPKTKSAEILTDQSVKVE 365

Query: 190 EELWIYQIQSFNFDPLSKILAGD 209
           + L ++ I SFNF+ L  ILAG+
Sbjct: 366 KHLHVHHIDSFNFNSLPNILAGN 381

[Close]

BLAST of Lcy09g019380 vs. TAIR 10
Match: AT2G23160.1 (F-box family protein )

HSP 1 Score: 51.6 bits (122), Expect = 8.9e-07
Identity = 22/66 (33.33%), Postives = 38/66 (57.58%), Query Frame = 0


Query: 11  EVFAYGPSSNKWKSVPFSLRLEINDDGVYLNGALFWIG----CYNVELESSYKNVLVCFD 70
           ++   G  + KW+++  SLR EI  +GV +NG L+++G      N + +  Y   +VCFD
Sbjct: 181 KILTVGTGNMKWRTIRCSLRYEIVSEGVSINGVLYYLGETSAWDNKDYDLKYDYAIVCFD 240

Query: 71  VEEERF 73
           +  E+F
Sbjct: 241 IRSEKF 246

[Close]

BLAST of Lcy09g019380 vs. TAIR 10
Match: AT2G16220.1 (F-box and associated interaction domains-containing protein )

HSP 1 Score: 49.7 bits (117), Expect = 3.4e-06
Identity = 29/118 (24.58%), Postives = 54/118 (45.76%), Query Frame = 0


Query: 11  EVFAYGPSSNKWKSVPFSLRLEINDDGVYLNGALFWIG---CYNVELESSYKNVLVCFDV 70
           ++  +G     WK + + +  +I   G+ +NG L+++G    ++ + + +  NVLVCFD+
Sbjct: 177 KILTFGDGDMNWKKIKYRVLHDIYSQGICINGVLYYLGDTSDWDNDHDVTSGNVLVCFDL 236

Query: 71  EEERFKEISFPQAGKDGKRNSLAIRVFDSHLYLSIFEMECFGYHVWKME--EEDLWIK 124
             E F  I          +  LA+  +D      + +      HVW +E  E+  W K
Sbjct: 237 RSESFTFIGLECGQLINYKGKLAVIFWDDVDDDDVKDDAIDEMHVWVLEDVEKKEWSK 294

[Close]

BLAST of Lcy09g019380 vs. TAIR 10
Match: AT2G16450.1 (F-box and associated interaction domains-containing protein )

HSP 1 Score: 45.8 bits (107), Expect = 4.9e-05
Identity = 23/68 (33.82%), Postives = 36/68 (52.94%), Query Frame = 0


Query: 12  VFAYGPSSNKWKSVPFSLRLEINDDGVYLNGALFWIG-------CYNVELESSYKNVLVC 71
           V  +G    KW+ +  SLR +I  +GV +NG L+++G            + S Y  ++VC
Sbjct: 188 VITFGAGDLKWRRIKCSLRHDIKSEGVCINGVLYYLGDTSDWSRVNGNHVTSGY--MIVC 247

Query: 72  FDVEEERF 73
           FDV  E+F
Sbjct: 248 FDVRSEKF 253

[Close]

BLAST of Lcy09g019380 vs. TAIR 10
Match: AT1G47350.1 (F-box associated ubiquitination effector family protein )

HSP 1 Score: 42.0 bits (97), Expect = 7.0e-04
Identity = 21/62 (33.87%), Postives = 34/62 (54.84%), Query Frame = 0


Query: 11  EVFAYGPSSNKWKSVPFSLRLEINDDGVYLNGALFWIGCYNVELESSYKNVLVCFDVEEE 70
           +V   G     W+ +  +LR EI  +G+ +NG ++++G  +  L S    V+VCFDV  E
Sbjct: 254 KVLKLGSGEMSWRRLKRTLRHEIMSEGICINGVVYYLGDTSEVLTSF---VVVCFDVRYE 312

Query: 71  RF 73
            F
Sbjct: 314 TF 312

The following BLAST results are available for this feature:

BLAST of Lcy09g019380 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q1KS79	1.2e-05	33.33	F-box protein At2g23160 OS=Arabidopsis thaliana OX=3702 GN=At2g23160 PE=2 SV=1	[more]
Q8S8C7	4.7e-05	24.58	Putative F-box protein At2g16220 OS=Arabidopsis thaliana OX=3702 GN=At2g16220 PE...	[more]
Q9SIV7	6.8e-04	33.82	F-box protein At2g16450 OS=Arabidopsis thaliana OX=3702 GN=At2g16450 PE=2 SV=1	[more]

BLAST of Lcy09g019380 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M1M5	6.8e-31	40.59	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G572960 PE=4 ...	[more]
A0A6J1CQE2	3.2e-28	40.39	F-box/kelch-repeat protein At3g06240-like OS=Momordica charantia OX=3673 GN=LOC1...	[more]
A0A5D3CM94	3.5e-27	37.44	Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2...	[more]
A0A1S3B0Q6	7.8e-27	37.44	putative F-box protein At3g21120 OS=Cucumis melo OX=3656 GN=LOC103484583 PE=4 SV...	[more]
A0A5D3CIX9	1.0e-26	36.54	Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1...	[more]

BLAST of Lcy09g019380 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038880514.1	3.3e-32	41.55	putative F-box protein At1g46984 [Benincasa hispida]	[more]
XP_004135796.1	1.4e-30	40.59	putative F-box protein At1g46984 [Cucumis sativus] >KGN66126.1 hypothetical prot...	[more]
XP_022143297.1	6.5e-28	40.39	F-box/kelch-repeat protein At3g06240-like [Momordica charantia]	[more]
TYK13067.1	7.2e-27	37.44	putative F-box protein [Cucumis melo var. makuwa]	[more]
XP_008439950.1	1.6e-26	37.44	PREDICTED: putative F-box protein At3g21120 [Cucumis melo]	[more]

BLAST of Lcy09g019380 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G23160.1	8.9e-07	33.33	F-box family protein	[more]
AT2G16220.1	3.4e-06	24.58	F-box and associated interaction domains-containing protein	[more]
AT2G16450.1	4.9e-05	33.82	F-box and associated interaction domains-containing protein	[more]
AT1G47350.1	7.0e-04	33.87	F-box associated ubiquitination effector family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013187	F-box associated domain, type 3	PFAM	PF08268	FBA_3	coord: 37..158 e-value: 6.0E-7 score: 29.5
IPR017451	F-box associated interaction domain	TIGRFAM	TIGR01640	TIGR01640	coord: 7..161 e-value: 9.5E-14 score: 49.2
None	No IPR available	PANTHER	PTHR47993	OS09G0372900 PROTEIN-RELATED	coord: 9..143
None	No IPR available	PANTHER	PTHR47993:SF20	F-BOX FAMILY PROTEIN	coord: 9..143
IPR011043	Galactose oxidase/kelch, beta-propeller	SUPERFAMILY	50965	Galactose oxidase, central domain	coord: 12..175

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy09g019380.1	Lcy09g019380.1	mRNA