Lcy09g019150 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy09g019150
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	syntaxin-42-like isoform X2
Location	Chr09: 43176577 .. 43178607 (-)
RNA-Seq Expression	Lcy09g019150
Synteny	Lcy09g019150

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACATTAGAAAAAATGTCCAGGTGCGCTTGATTCTCACTAAATTTTCTGCTTAATACTTCAAATGATCCGACGTTGGAGCTGAGTCGTTAGTCTTTTAGTATGATTTCTTTATGTTATTGCATTTTTAACCGTTGTTCATAGTTTTCGTTGTTGGGACCTTTTTTGTGCTTCCATGTATAAGATTCTTACAAACTTCTCCCCTCCCTAAAAGTGTTTCTGGATTCTGATATTCATTCTCTTTTAACAGCACGTTCCTTTTTGTGATGGTTTTACTCCTTTTCTTAACAGCATTCTCTTGCTACAGAGCTTCAGAATCTTTCTATGGACCTTCGTAGAAGACGGTCAATGTATCTGAAACGTCTACAGCAGCAAAAGGAGGTTAGTGGCCCGTGTTCTTGATGGATCTATGAGATATTTCTGATTTGTTTGGAAAGATTGCATCTGATCTTGAAAGTTGCCCATTGAACAGAGTTTCATCCTTTTTCTCTCACTTTACAGTTTTATTGTACTTTTCTCTTATCAATTAAAAATTTGTTTCATATGAAAAAAAAATCCACAATTACGACAATTCTCTCCCATCTCAATTCTTCTGTTGGTCTATCATTTTAGGATTTTACTTTTCTTGGCAAATTTGTAGTTTGATTAATAGTGAGCAATTTTTCTGGAGTCTTATTATTTGAAACATTGTTCTTTTTATTCAATGAGGCTTAGTTACTTTTGTATTGCAGGGACATGATGGAATTGATTTGGAGATAAATTTGAATGGCAACAAAACTCTACATGAGGATGATGAATATGGTGAATTTGTATGTGCTCATCTCTTTGGTTACCTTGACTTATCAAGACTTAACTTTTCTCATGCAAGGGTTTAGTATTTGAGAACTCAAACCACAAAATAACATATTAGTTTCTAACTCCAAAGGTTTCCATGACTGTTAAATCTTTTTGGGTGTTCCATGTTTCGGATAAGTGGATTGTTCTCAAGTCTCCCCCTGTATCATAGTGGTCGATTTTGTTTGGCATATGATGGTGGTTGATTTTGTTAGTCATAATCATAGGCATGGGCTGTCTTATTATTTTGTATGCTAGGGTAGCAAACATCCCATTGGTTATTCTTTTAGATGTGTATAACATATCATTATTAATCACTTAGCCTCTTTGATTGGTATTTTTGTGTGGGAATCAGGGAACCATTGAAAACCAAACGATGACATTTGGAATTGATGAGCAGCACATCCAGGGAAGGGAGAAAGAGATCAGACAGGTTATGAAAGGTTCTTGAATTCTTGTCCCGAGACGAATTAGTCACAATGTGATGAATGTGTATCTTTTTACGTGTAGGTTGTGAAATCAGTAAATGAGCTTGCACAAATTATGAAGGATCTCTCAACCCTTGTCATAGAGCAGGTTAAAGCCAATATTCCTCTTAAATGTGTGCTTGTGTGTTTTTATCAATATGGGTTTACAATCAACTAATGAACGTTGTTGCTTCTATCAGGGTACTATAGTCGATAGGATCGACCACAATATTCAGAATGTTGCTACAACCGTGGAAGAGGGCTATAAACAGCTTCAGAAGGTTCTCTCTTTCTTTCTTACTTTCATAGAAAATGGTCATTGTGTTTGGTTTTTGAAAATTGTGCTTGTTTTCTCACGTTTTCTTTACAACGATTTTCATCTTTTTTAAGGAAATTAAACATTTGAATTCTTAGTCAAATTAAAAAAAAAAAGTACTTTGGGTAGTTTTCAAAACTTGGCTTGGATTTTGAAAACTTTTGTAAAATGTAAATAACAAAAACAAAGGAACCCATAGGTGGAAGAAGTATTTATAAGCTTAATTTTCAAAAAACCAAAAAACAAATGTTTATCAAACAAGGTTTCAACGATGAAGCTGACGGTGAGGTGTTTTGGGGTCACAGGCGGAGAAGACTCAGAAGGATGGAGGAATGGTGAAGTGTGCAACAGTGCTTGTTATTATGTGTTTCGTAATGCTCGTTCTTTTGATACTCAAGGAGATAATTATGTAA

mRNA sequence

ATGAACATTAGAAAAAATGTCCAGCATTCTCTTGCTACAGAGCTTCAGAATCTTTCTATGGACCTTCGTAGAAGACGGTCAATGTATCTGAAACGTCTACAGCAGCAAAAGGAGGGACATGATGGAATTGATTTGGAGATAAATTTGAATGGCAACAAAACTCTACATGAGGATGATGAATATGGTGAATTTGGAACCATTGAAAACCAAACGATGACATTTGGAATTGATGAGCAGCACATCCAGGGAAGGGAGAAAGAGATCAGACAGGTTGTGAAATCAGTAAATGAGCTTGCACAAATTATGAAGGATCTCTCAACCCTTGTCATAGAGCAGGGTACTATAGTCGATAGGATCGACCACAATATTCAGAATGTTGCTACAACCGTGGAAGAGGGCTATAAACAGCTTCAGAAGGCGGAGAAGACTCAGAAGGATGGAGGAATGGTGAAGTGTGCAACAGTGCTTGTTATTATGTGTTTCGTAATGCTCGTTCTTTTGATACTCAAGGAGATAATTATGTAA

Coding sequence (CDS)

ATGAACATTAGAAAAAATGTCCAGCATTCTCTTGCTACAGAGCTTCAGAATCTTTCTATGGACCTTCGTAGAAGACGGTCAATGTATCTGAAACGTCTACAGCAGCAAAAGGAGGGACATGATGGAATTGATTTGGAGATAAATTTGAATGGCAACAAAACTCTACATGAGGATGATGAATATGGTGAATTTGGAACCATTGAAAACCAAACGATGACATTTGGAATTGATGAGCAGCACATCCAGGGAAGGGAGAAAGAGATCAGACAGGTTGTGAAATCAGTAAATGAGCTTGCACAAATTATGAAGGATCTCTCAACCCTTGTCATAGAGCAGGGTACTATAGTCGATAGGATCGACCACAATATTCAGAATGTTGCTACAACCGTGGAAGAGGGCTATAAACAGCTTCAGAAGGCGGAGAAGACTCAGAAGGATGGAGGAATGGTGAAGTGTGCAACAGTGCTTGTTATTATGTGTTTCGTAATGCTCGTTCTTTTGATACTCAAGGAGATAATTATGTAA

Protein sequence

MNIRKNVQHSLATELQNLSMDLRRRRSMYLKRLQQQKEGHDGIDLEINLNGNKTLHEDDEYGEFGTIENQTMTFGIDEQHIQGREKEIRQVVKSVNELAQIMKDLSTLVIEQGTIVDRIDHNIQNVATTVEEGYKQLQKAEKTQKDGGMVKCATVLVIMCFVMLVLLILKEIIM

Homology

[Close]

BLAST of Lcy09g019150 vs. ExPASy Swiss-Prot
Match: Q9SWH4 (Syntaxin-42 OS=Arabidopsis thaliana OX=3702 GN=SYP42 PE=1 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 3.9e-53
Identity = 115/174 (66.09%), Postives = 147/174 (84.48%), Query Frame = 0


Query: 2   NIRKNVQHSLATELQNLSMDLRRRRSMYLKRLQQQKEGHDGIDLEINLNGNKT-LHEDDE 61
           N+RKNVQ SLAT+LQNLSM+LRR++S YLKRLQQQKEG D +DLE N+NG  + L E+DE
Sbjct: 150 NLRKNVQRSLATDLQNLSMELRRKQSTYLKRLQQQKEGQDEVDLEFNVNGKMSRLDEEDE 209

Query: 62  YGEFGTIENQTMTFGIDEQHIQG-REKEIRQVVKSVNELAQIMKDLSTLVIEQGTIVDRI 121
            G  G  E+QT+    + QH+   RE+EI+QV+ SVN+LAQIMKDLS LVI+QGTIVDRI
Sbjct: 210 LGGMGFDEHQTIKLK-EGQHVSAEREREIQQVLGSVNDLAQIMKDLSALVIDQGTIVDRI 269

Query: 122 DHNIQNVATTVEEGYKQLQKAEKTQKDGGMVKCATVLVIMCFVMLVLLILKEII 174
           D+N+QNV+T+VEEGYKQLQKAE+TQ++G MVKCAT+L+++C +M+VLLILK I+
Sbjct: 270 DYNVQNVSTSVEEGYKQLQKAERTQREGAMVKCATILLVLCLIMIVLLILKNIL 322

[Close]

BLAST of Lcy09g019150 vs. ExPASy Swiss-Prot
Match: Q9SUJ1 (Syntaxin-43 OS=Arabidopsis thaliana OX=3702 GN=SYP43 PE=2 SV=2)

HSP 1 Score: 201.4 bits (511), Expect = 8.1e-51
Identity = 114/173 (65.90%), Postives = 144/173 (83.24%), Query Frame = 0


Query: 2   NIRKNVQHSLATELQNLSMDLRRRRSMYLKRLQQQKEGHDGIDLEINLNGNKTLHEDDEY 61
           N+RKNVQ SLAT+LQNLSM+LR+++S YLKRL+ QKE  DG DLE+NLNG++   EDD++
Sbjct: 161 NVRKNVQRSLATDLQNLSMELRKKQSTYLKRLRLQKE--DGADLEMNLNGSRYKAEDDDF 220

Query: 62  GEFGTIENQTMTFGIDEQHIQGREKEIRQVVKSVNELAQIMKDLSTLVIEQGTIVDRIDH 121
            +    E+Q       E+    REKEI+QVV+SV+ELAQIMKDLS LVI+QGTIVDRID+
Sbjct: 221 DDMVFSEHQMSKIKKSEEISIEREKEIQQVVESVSELAQIMKDLSALVIDQGTIVDRIDY 280

Query: 122 NIQNVATTVEEGYKQLQKAEKTQKDGGMVKCATVLVIMCFVMLVLLILKEIIM 175
           NIQNVA+TV++G KQLQKAE+TQ+ GGMV CA+VLVI+CF+MLVLLILKEI++
Sbjct: 281 NIQNVASTVDDGLKQLQKAERTQRQGGMVMCASVLVILCFIMLVLLILKEILL 331

[Close]

BLAST of Lcy09g019150 vs. ExPASy Swiss-Prot
Match: O65359 (Syntaxin-41 OS=Arabidopsis thaliana OX=3702 GN=SYP41 PE=1 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 5.3e-50
Identity = 114/173 (65.90%), Postives = 145/173 (83.82%), Query Frame = 0


Query: 2   NIRKNVQHSLATELQNLSMDLRRRRSMYLKRLQQQKEGHDGIDLEINLNGNKTLHEDDEY 61
           N+RKNVQ SLAT+LQ LSM+LR+++S YLKRL+QQKE  DG+DLE+NL+ N+   E+D++
Sbjct: 153 NVRKNVQRSLATDLQLLSMELRKKQSTYLKRLRQQKE--DGMDLEMNLSRNRYRPEEDDF 212

Query: 62  GEFGTIENQTMTFGIDEQHIQGREKEIRQVVKSVNELAQIMKDLSTLVIEQGTIVDRIDH 121
           G+    E+Q       E+    REKEI+QVV+SVN+LAQIMKDLS LVI+QGTIVDRID+
Sbjct: 213 GDM-LNEHQMSKIKKSEEVSVEREKEIQQVVESVNDLAQIMKDLSALVIDQGTIVDRIDY 272

Query: 122 NIQNVATTVEEGYKQLQKAEKTQKDGGMVKCATVLVIMCFVMLVLLILKEIIM 175
           NI+NVATTVE+G KQLQKAE+TQ+ GGMVKCA+VLVI+CF+ML+LLILKEI +
Sbjct: 273 NIENVATTVEDGLKQLQKAERTQRHGGMVKCASVLVILCFIMLLLLILKEIFL 322

[Close]

BLAST of Lcy09g019150 vs. ExPASy Swiss-Prot
Match: Q8BVI5 (Syntaxin-16 OS=Mus musculus OX=10090 GN=Stx16 PE=1 SV=3)

HSP 1 Score: 89.0 bits (219), Expect = 5.9e-17
Identity = 60/168 (35.71%), Postives = 100/168 (59.52%), Query Frame = 0


Query: 5   KNVQHSLATELQNLSMDLRRRRSMYLKRLQQQKE-GHDGIDLEINLNGNKTLHEDDE--- 64
           +NV  SLA  LQ LS   R  +S YLKR++ ++E      D  + L     + + D+   
Sbjct: 160 RNVVASLAQALQELSTSFRHAQSDYLKRMKNREERSQHFFDTPVPL-----MDDGDDATL 219

Query: 65  YGEFGTIENQTMTFGIDEQHIQGREKEIRQVVKSVNELAQIMKDLSTLVIEQGTIVDRID 124
           YG+ G  ++Q +    +   ++ RE+EIRQ+V+S+++L +I +DL  +++EQGT++DRID
Sbjct: 220 YGQ-GFTDDQLVLVEQNTLMVEEREREIRQIVQSISDLNEIFRDLGAMIVEQGTVLDRID 279

Query: 125 HNIQNVATTVEEGYKQLQKAEKTQKDGGMVKCATVLVIMCFVMLVLLI 169
           +N++      E+G KQL KAE+ QK    +    +LV +  V+LV L+
Sbjct: 280 YNVEQSCVKTEDGLKQLHKAEQYQKKNRKMLVIVILVAVIIVLLVALV 321

[Close]

BLAST of Lcy09g019150 vs. ExPASy Swiss-Prot
Match: O14662 (Syntaxin-16 OS=Homo sapiens OX=9606 GN=STX16 PE=1 SV=3)

HSP 1 Score: 87.8 bits (216), Expect = 1.3e-16
Identity = 57/164 (34.76%), Postives = 97/164 (59.15%), Query Frame = 0


Query: 6   NVQHSLATELQNLSMDLRRRRSMYLKRLQQQKE-GHDGIDLEINLNGNKTLHEDDEYGEF 65
           NV  SLA  LQ LS   R  +S YLKR++ ++E      D  + L  +    +D+     
Sbjct: 160 NVVASLAQALQELSTSFRHAQSGYLKRMKNREERSQHFFDTSVPLMDD---GDDNTLYHR 219

Query: 66  GTIENQTMTFGIDEQHIQGREKEIRQVVKSVNELAQIMKDLSTLVIEQGTIVDRIDHNIQ 125
           G  E+Q +    +   ++ RE+EIRQ+V+S+++L +I +DL  +++EQGT++DRID+N++
Sbjct: 220 GFTEDQLVLVEQNTLMVEEREREIRQIVQSISDLNEIFRDLGAMIVEQGTVLDRIDYNVE 279

Query: 126 NVATTVEEGYKQLQKAEKTQKDGGMVKCATVLVIMCFVMLVLLI 169
                 E+G KQL KAE+ QK    +    +L ++  V++V+L+
Sbjct: 280 QSCIKTEDGLKQLHKAEQYQKKNRKMLVILILFVIIIVLIVVLV 320

[Close]

BLAST of Lcy09g019150 vs. ExPASy TrEMBL
Match: A0A6J1CT59 (syntaxin-42-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111013977 PE=3 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 1.1e-74
Identity = 158/173 (91.33%), Postives = 163/173 (94.22%), Query Frame = 0


Query: 2   NIRKNVQHSLATELQNLSMDLRRRRSMYLKRLQQQKEGHDGIDLEINLNGNKTLHEDDEY 61
           NIRKNVQ SLATELQNLSMDLRRR+SMYLKRLQQQKEGHDGIDLEINLNGNKTL EDD +
Sbjct: 148 NIRKNVQRSLATELQNLSMDLRRRQSMYLKRLQQQKEGHDGIDLEINLNGNKTLLEDDGF 207

Query: 62  GEFGTIENQTMTFGIDEQHIQGREKEIRQVVKSVNELAQIMKDLSTLVIEQGTIVDRIDH 121
           GEFG  ENQTMT G DEQHIQGREKEI QVVKSVNELAQIMKDLSTLVI+QGTIVDRIDH
Sbjct: 208 GEFGINENQTMTLGTDEQHIQGREKEIIQVVKSVNELAQIMKDLSTLVIDQGTIVDRIDH 267

Query: 122 NIQNVATTVEEGYKQLQKAEKTQKDGGMVKCATVLVIMCFVMLVLLILKEIIM 175
           NIQNVA +VEEGYKQLQKAEKTQK GGMVKCATVLVIMCFVML+LLILKEIIM
Sbjct: 268 NIQNVAASVEEGYKQLQKAEKTQKSGGMVKCATVLVIMCFVMLLLLILKEIIM 320

[Close]

BLAST of Lcy09g019150 vs. ExPASy TrEMBL
Match: A0A6J1CR44 (syntaxin-42-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111013977 PE=3 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 1.1e-74
Identity = 158/173 (91.33%), Postives = 163/173 (94.22%), Query Frame = 0


Query: 2   NIRKNVQHSLATELQNLSMDLRRRRSMYLKRLQQQKEGHDGIDLEINLNGNKTLHEDDEY 61
           NIRKNVQ SLATELQNLSMDLRRR+SMYLKRLQQQKEGHDGIDLEINLNGNKTL EDD +
Sbjct: 149 NIRKNVQRSLATELQNLSMDLRRRQSMYLKRLQQQKEGHDGIDLEINLNGNKTLLEDDGF 208

Query: 62  GEFGTIENQTMTFGIDEQHIQGREKEIRQVVKSVNELAQIMKDLSTLVIEQGTIVDRIDH 121
           GEFG  ENQTMT G DEQHIQGREKEI QVVKSVNELAQIMKDLSTLVI+QGTIVDRIDH
Sbjct: 209 GEFGINENQTMTLGTDEQHIQGREKEIIQVVKSVNELAQIMKDLSTLVIDQGTIVDRIDH 268

Query: 122 NIQNVATTVEEGYKQLQKAEKTQKDGGMVKCATVLVIMCFVMLVLLILKEIIM 175
           NIQNVA +VEEGYKQLQKAEKTQK GGMVKCATVLVIMCFVML+LLILKEIIM
Sbjct: 269 NIQNVAASVEEGYKQLQKAEKTQKSGGMVKCATVLVIMCFVMLLLLILKEIIM 321

[Close]

BLAST of Lcy09g019150 vs. ExPASy TrEMBL
Match: A0A6J1GR78 (syntaxin-41-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111456390 PE=3 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 2.1e-73
Identity = 152/174 (87.36%), Postives = 166/174 (95.40%), Query Frame = 0


Query: 1   MNIRKNVQHSLATELQNLSMDLRRRRSMYLKRLQQQKEGHDGIDLEINLNGNKTLHEDDE 60
           ++IRKNVQ SLATELQNLSMDLRRR+SMYLK LQQQKEGHDGIDLEINLNG++TL +DD 
Sbjct: 148 ISIRKNVQRSLATELQNLSMDLRRRQSMYLKHLQQQKEGHDGIDLEINLNGSRTLQDDDR 207

Query: 61  YGEFGTIENQTMTFGIDEQHIQGREKEIRQVVKSVNELAQIMKDLSTLVIEQGTIVDRID 120
           Y EFGT E+QTMTFG+D QHIQGREKEI+QVVKSVNELAQIMKDLSTLVI+QGTIVDRID
Sbjct: 208 YDEFGTNEHQTMTFGMDAQHIQGREKEIKQVVKSVNELAQIMKDLSTLVIDQGTIVDRID 267

Query: 121 HNIQNVATTVEEGYKQLQKAEKTQKDGGMVKCATVLVIMCFVMLVLLILKEIIM 175
           HNIQNVA +VEEGYKQLQKAEK+QK+GGMVKCATVLVIMCF+MLVLLILKEIIM
Sbjct: 268 HNIQNVAASVEEGYKQLQKAEKSQKNGGMVKCATVLVIMCFIMLVLLILKEIIM 321

[Close]

BLAST of Lcy09g019150 vs. ExPASy TrEMBL
Match: A0A6J1GRK4 (syntaxin-41-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111456390 PE=3 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 2.1e-73
Identity = 152/174 (87.36%), Postives = 166/174 (95.40%), Query Frame = 0


Query: 1   MNIRKNVQHSLATELQNLSMDLRRRRSMYLKRLQQQKEGHDGIDLEINLNGNKTLHEDDE 60
           ++IRKNVQ SLATELQNLSMDLRRR+SMYLK LQQQKEGHDGIDLEINLNG++TL +DD 
Sbjct: 149 ISIRKNVQRSLATELQNLSMDLRRRQSMYLKHLQQQKEGHDGIDLEINLNGSRTLQDDDR 208

Query: 61  YGEFGTIENQTMTFGIDEQHIQGREKEIRQVVKSVNELAQIMKDLSTLVIEQGTIVDRID 120
           Y EFGT E+QTMTFG+D QHIQGREKEI+QVVKSVNELAQIMKDLSTLVI+QGTIVDRID
Sbjct: 209 YDEFGTNEHQTMTFGMDAQHIQGREKEIKQVVKSVNELAQIMKDLSTLVIDQGTIVDRID 268

Query: 121 HNIQNVATTVEEGYKQLQKAEKTQKDGGMVKCATVLVIMCFVMLVLLILKEIIM 175
           HNIQNVA +VEEGYKQLQKAEK+QK+GGMVKCATVLVIMCF+MLVLLILKEIIM
Sbjct: 269 HNIQNVAASVEEGYKQLQKAEKSQKNGGMVKCATVLVIMCFIMLVLLILKEIIM 322

[Close]

BLAST of Lcy09g019150 vs. ExPASy TrEMBL
Match: A0A6J1JVK5 (syntaxin-42-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111487948 PE=3 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 4.6e-73
Identity = 151/174 (86.78%), Postives = 166/174 (95.40%), Query Frame = 0


Query: 1   MNIRKNVQHSLATELQNLSMDLRRRRSMYLKRLQQQKEGHDGIDLEINLNGNKTLHEDDE 60
           ++IRKNVQ SLATELQNLS+DLRRR+SMYLK LQQQKEGHDGIDLEINLNG++TL +DD 
Sbjct: 148 ISIRKNVQRSLATELQNLSLDLRRRQSMYLKHLQQQKEGHDGIDLEINLNGSRTLQDDDR 207

Query: 61  YGEFGTIENQTMTFGIDEQHIQGREKEIRQVVKSVNELAQIMKDLSTLVIEQGTIVDRID 120
           Y EFGT E+QTMTFG+D QHIQGREKEI+QVVKSVNELAQIMKDLSTLVI+QGTIVDRID
Sbjct: 208 YDEFGTNEHQTMTFGMDAQHIQGREKEIKQVVKSVNELAQIMKDLSTLVIDQGTIVDRID 267

Query: 121 HNIQNVATTVEEGYKQLQKAEKTQKDGGMVKCATVLVIMCFVMLVLLILKEIIM 175
           HNIQNVA +VEEGYKQLQKAEK+QK+GGMVKCATVLVIMCF+MLVLLILKEIIM
Sbjct: 268 HNIQNVAASVEEGYKQLQKAEKSQKNGGMVKCATVLVIMCFIMLVLLILKEIIM 321

[Close]

BLAST of Lcy09g019150 vs. NCBI nr
Match: XP_022144257.1 (syntaxin-42-like isoform X2 [Momordica charantia])

HSP 1 Score: 289.3 bits (739), Expect = 2.3e-74
Identity = 158/173 (91.33%), Postives = 163/173 (94.22%), Query Frame = 0


Query: 2   NIRKNVQHSLATELQNLSMDLRRRRSMYLKRLQQQKEGHDGIDLEINLNGNKTLHEDDEY 61
           NIRKNVQ SLATELQNLSMDLRRR+SMYLKRLQQQKEGHDGIDLEINLNGNKTL EDD +
Sbjct: 148 NIRKNVQRSLATELQNLSMDLRRRQSMYLKRLQQQKEGHDGIDLEINLNGNKTLLEDDGF 207

Query: 62  GEFGTIENQTMTFGIDEQHIQGREKEIRQVVKSVNELAQIMKDLSTLVIEQGTIVDRIDH 121
           GEFG  ENQTMT G DEQHIQGREKEI QVVKSVNELAQIMKDLSTLVI+QGTIVDRIDH
Sbjct: 208 GEFGINENQTMTLGTDEQHIQGREKEIIQVVKSVNELAQIMKDLSTLVIDQGTIVDRIDH 267

Query: 122 NIQNVATTVEEGYKQLQKAEKTQKDGGMVKCATVLVIMCFVMLVLLILKEIIM 175
           NIQNVA +VEEGYKQLQKAEKTQK GGMVKCATVLVIMCFVML+LLILKEIIM
Sbjct: 268 NIQNVAASVEEGYKQLQKAEKTQKSGGMVKCATVLVIMCFVMLLLLILKEIIM 320

[Close]

BLAST of Lcy09g019150 vs. NCBI nr
Match: XP_022144250.1 (syntaxin-42-like isoform X1 [Momordica charantia])

HSP 1 Score: 289.3 bits (739), Expect = 2.3e-74
Identity = 158/173 (91.33%), Postives = 163/173 (94.22%), Query Frame = 0


Query: 2   NIRKNVQHSLATELQNLSMDLRRRRSMYLKRLQQQKEGHDGIDLEINLNGNKTLHEDDEY 61
           NIRKNVQ SLATELQNLSMDLRRR+SMYLKRLQQQKEGHDGIDLEINLNGNKTL EDD +
Sbjct: 149 NIRKNVQRSLATELQNLSMDLRRRQSMYLKRLQQQKEGHDGIDLEINLNGNKTLLEDDGF 208

Query: 62  GEFGTIENQTMTFGIDEQHIQGREKEIRQVVKSVNELAQIMKDLSTLVIEQGTIVDRIDH 121
           GEFG  ENQTMT G DEQHIQGREKEI QVVKSVNELAQIMKDLSTLVI+QGTIVDRIDH
Sbjct: 209 GEFGINENQTMTLGTDEQHIQGREKEIIQVVKSVNELAQIMKDLSTLVIDQGTIVDRIDH 268

Query: 122 NIQNVATTVEEGYKQLQKAEKTQKDGGMVKCATVLVIMCFVMLVLLILKEIIM 175
           NIQNVA +VEEGYKQLQKAEKTQK GGMVKCATVLVIMCFVML+LLILKEIIM
Sbjct: 269 NIQNVAASVEEGYKQLQKAEKTQKSGGMVKCATVLVIMCFVMLLLLILKEIIM 321

[Close]

BLAST of Lcy09g019150 vs. NCBI nr
Match: XP_023548705.1 (syntaxin-42-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 285.0 bits (728), Expect = 4.3e-73
Identity = 152/174 (87.36%), Postives = 166/174 (95.40%), Query Frame = 0


Query: 1   MNIRKNVQHSLATELQNLSMDLRRRRSMYLKRLQQQKEGHDGIDLEINLNGNKTLHEDDE 60
           ++IRKNVQ SLATELQNLSMDLRRR+SMYLK LQQQKEGHDGIDLEINLNG++TL +DD 
Sbjct: 149 ISIRKNVQRSLATELQNLSMDLRRRQSMYLKHLQQQKEGHDGIDLEINLNGSRTLQDDDR 208

Query: 61  YGEFGTIENQTMTFGIDEQHIQGREKEIRQVVKSVNELAQIMKDLSTLVIEQGTIVDRID 120
           Y EFGT E+QTMTFG+D QHIQGREKEI+QVVKSVNELAQIMKDLSTLVI+QGTIVDRID
Sbjct: 209 YDEFGTNEHQTMTFGMDAQHIQGREKEIKQVVKSVNELAQIMKDLSTLVIDQGTIVDRID 268

Query: 121 HNIQNVATTVEEGYKQLQKAEKTQKDGGMVKCATVLVIMCFVMLVLLILKEIIM 175
           HNIQNVA +VEEGYKQLQKAEK+QK+GGMVKCATVLVIMCF+MLVLLILKEIIM
Sbjct: 269 HNIQNVAASVEEGYKQLQKAEKSQKNGGMVKCATVLVIMCFIMLVLLILKEIIM 322

[Close]

BLAST of Lcy09g019150 vs. NCBI nr
Match: XP_022954000.1 (syntaxin-41-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 285.0 bits (728), Expect = 4.3e-73
Identity = 152/174 (87.36%), Postives = 166/174 (95.40%), Query Frame = 0


Query: 1   MNIRKNVQHSLATELQNLSMDLRRRRSMYLKRLQQQKEGHDGIDLEINLNGNKTLHEDDE 60
           ++IRKNVQ SLATELQNLSMDLRRR+SMYLK LQQQKEGHDGIDLEINLNG++TL +DD 
Sbjct: 148 ISIRKNVQRSLATELQNLSMDLRRRQSMYLKHLQQQKEGHDGIDLEINLNGSRTLQDDDR 207

Query: 61  YGEFGTIENQTMTFGIDEQHIQGREKEIRQVVKSVNELAQIMKDLSTLVIEQGTIVDRID 120
           Y EFGT E+QTMTFG+D QHIQGREKEI+QVVKSVNELAQIMKDLSTLVI+QGTIVDRID
Sbjct: 208 YDEFGTNEHQTMTFGMDAQHIQGREKEIKQVVKSVNELAQIMKDLSTLVIDQGTIVDRID 267

Query: 121 HNIQNVATTVEEGYKQLQKAEKTQKDGGMVKCATVLVIMCFVMLVLLILKEIIM 175
           HNIQNVA +VEEGYKQLQKAEK+QK+GGMVKCATVLVIMCF+MLVLLILKEIIM
Sbjct: 268 HNIQNVAASVEEGYKQLQKAEKSQKNGGMVKCATVLVIMCFIMLVLLILKEIIM 321

[Close]

BLAST of Lcy09g019150 vs. NCBI nr
Match: XP_022953999.1 (syntaxin-41-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 285.0 bits (728), Expect = 4.3e-73
Identity = 152/174 (87.36%), Postives = 166/174 (95.40%), Query Frame = 0


Query: 1   MNIRKNVQHSLATELQNLSMDLRRRRSMYLKRLQQQKEGHDGIDLEINLNGNKTLHEDDE 60
           ++IRKNVQ SLATELQNLSMDLRRR+SMYLK LQQQKEGHDGIDLEINLNG++TL +DD 
Sbjct: 149 ISIRKNVQRSLATELQNLSMDLRRRQSMYLKHLQQQKEGHDGIDLEINLNGSRTLQDDDR 208

Query: 61  YGEFGTIENQTMTFGIDEQHIQGREKEIRQVVKSVNELAQIMKDLSTLVIEQGTIVDRID 120
           Y EFGT E+QTMTFG+D QHIQGREKEI+QVVKSVNELAQIMKDLSTLVI+QGTIVDRID
Sbjct: 209 YDEFGTNEHQTMTFGMDAQHIQGREKEIKQVVKSVNELAQIMKDLSTLVIDQGTIVDRID 268

Query: 121 HNIQNVATTVEEGYKQLQKAEKTQKDGGMVKCATVLVIMCFVMLVLLILKEIIM 175
           HNIQNVA +VEEGYKQLQKAEK+QK+GGMVKCATVLVIMCF+MLVLLILKEIIM
Sbjct: 269 HNIQNVAASVEEGYKQLQKAEKSQKNGGMVKCATVLVIMCFIMLVLLILKEIIM 322

[Close]

BLAST of Lcy09g019150 vs. TAIR 10
Match: AT4G02195.1 (syntaxin of plants 42 )

HSP 1 Score: 209.1 bits (531), Expect = 2.8e-54
Identity = 115/174 (66.09%), Postives = 147/174 (84.48%), Query Frame = 0


Query: 2   NIRKNVQHSLATELQNLSMDLRRRRSMYLKRLQQQKEGHDGIDLEINLNGNKT-LHEDDE 61
           N+RKNVQ SLAT+LQNLSM+LRR++S YLKRLQQQKEG D +DLE N+NG  + L E+DE
Sbjct: 150 NLRKNVQRSLATDLQNLSMELRRKQSTYLKRLQQQKEGQDEVDLEFNVNGKMSRLDEEDE 209

Query: 62  YGEFGTIENQTMTFGIDEQHIQG-REKEIRQVVKSVNELAQIMKDLSTLVIEQGTIVDRI 121
            G  G  E+QT+    + QH+   RE+EI+QV+ SVN+LAQIMKDLS LVI+QGTIVDRI
Sbjct: 210 LGGMGFDEHQTIKLK-EGQHVSAEREREIQQVLGSVNDLAQIMKDLSALVIDQGTIVDRI 269

Query: 122 DHNIQNVATTVEEGYKQLQKAEKTQKDGGMVKCATVLVIMCFVMLVLLILKEII 174
           D+N+QNV+T+VEEGYKQLQKAE+TQ++G MVKCAT+L+++C +M+VLLILK I+
Sbjct: 270 DYNVQNVSTSVEEGYKQLQKAERTQREGAMVKCATILLVLCLIMIVLLILKNIL 322

[Close]

BLAST of Lcy09g019150 vs. TAIR 10
Match: AT3G05710.1 (syntaxin of plants 43 )

HSP 1 Score: 201.4 bits (511), Expect = 5.8e-52
Identity = 114/173 (65.90%), Postives = 144/173 (83.24%), Query Frame = 0


Query: 2   NIRKNVQHSLATELQNLSMDLRRRRSMYLKRLQQQKEGHDGIDLEINLNGNKTLHEDDEY 61
           N+RKNVQ SLAT+LQNLSM+LR+++S YLKRL+ QKE  DG DLE+NLNG++   EDD++
Sbjct: 160 NVRKNVQRSLATDLQNLSMELRKKQSTYLKRLRLQKE--DGADLEMNLNGSRYKAEDDDF 219

Query: 62  GEFGTIENQTMTFGIDEQHIQGREKEIRQVVKSVNELAQIMKDLSTLVIEQGTIVDRIDH 121
            +    E+Q       E+    REKEI+QVV+SV+ELAQIMKDLS LVI+QGTIVDRID+
Sbjct: 220 DDMVFSEHQMSKIKKSEEISIEREKEIQQVVESVSELAQIMKDLSALVIDQGTIVDRIDY 279

Query: 122 NIQNVATTVEEGYKQLQKAEKTQKDGGMVKCATVLVIMCFVMLVLLILKEIIM 175
           NIQNVA+TV++G KQLQKAE+TQ+ GGMV CA+VLVI+CF+MLVLLILKEI++
Sbjct: 280 NIQNVASTVDDGLKQLQKAERTQRQGGMVMCASVLVILCFIMLVLLILKEILL 330

[Close]

BLAST of Lcy09g019150 vs. TAIR 10
Match: AT3G05710.2 (syntaxin of plants 43 )

HSP 1 Score: 201.4 bits (511), Expect = 5.8e-52
Identity = 114/173 (65.90%), Postives = 144/173 (83.24%), Query Frame = 0


Query: 2   NIRKNVQHSLATELQNLSMDLRRRRSMYLKRLQQQKEGHDGIDLEINLNGNKTLHEDDEY 61
           N+RKNVQ SLAT+LQNLSM+LR+++S YLKRL+ QKE  DG DLE+NLNG++   EDD++
Sbjct: 161 NVRKNVQRSLATDLQNLSMELRKKQSTYLKRLRLQKE--DGADLEMNLNGSRYKAEDDDF 220

Query: 62  GEFGTIENQTMTFGIDEQHIQGREKEIRQVVKSVNELAQIMKDLSTLVIEQGTIVDRIDH 121
            +    E+Q       E+    REKEI+QVV+SV+ELAQIMKDLS LVI+QGTIVDRID+
Sbjct: 221 DDMVFSEHQMSKIKKSEEISIEREKEIQQVVESVSELAQIMKDLSALVIDQGTIVDRIDY 280

Query: 122 NIQNVATTVEEGYKQLQKAEKTQKDGGMVKCATVLVIMCFVMLVLLILKEIIM 175
           NIQNVA+TV++G KQLQKAE+TQ+ GGMV CA+VLVI+CF+MLVLLILKEI++
Sbjct: 281 NIQNVASTVDDGLKQLQKAERTQRQGGMVMCASVLVILCFIMLVLLILKEILL 331

[Close]

BLAST of Lcy09g019150 vs. TAIR 10
Match: AT5G26980.1 (syntaxin of plants 41 )

HSP 1 Score: 198.7 bits (504), Expect = 3.7e-51
Identity = 114/173 (65.90%), Postives = 145/173 (83.82%), Query Frame = 0


Query: 2   NIRKNVQHSLATELQNLSMDLRRRRSMYLKRLQQQKEGHDGIDLEINLNGNKTLHEDDEY 61
           N+RKNVQ SLAT+LQ LSM+LR+++S YLKRL+QQKE  DG+DLE+NL+ N+   E+D++
Sbjct: 153 NVRKNVQRSLATDLQLLSMELRKKQSTYLKRLRQQKE--DGMDLEMNLSRNRYRPEEDDF 212

Query: 62  GEFGTIENQTMTFGIDEQHIQGREKEIRQVVKSVNELAQIMKDLSTLVIEQGTIVDRIDH 121
           G+    E+Q       E+    REKEI+QVV+SVN+LAQIMKDLS LVI+QGTIVDRID+
Sbjct: 213 GDM-LNEHQMSKIKKSEEVSVEREKEIQQVVESVNDLAQIMKDLSALVIDQGTIVDRIDY 272

Query: 122 NIQNVATTVEEGYKQLQKAEKTQKDGGMVKCATVLVIMCFVMLVLLILKEIIM 175
           NI+NVATTVE+G KQLQKAE+TQ+ GGMVKCA+VLVI+CF+ML+LLILKEI +
Sbjct: 273 NIENVATTVEDGLKQLQKAERTQRHGGMVKCASVLVILCFIMLLLLILKEIFL 322

[Close]

BLAST of Lcy09g019150 vs. TAIR 10
Match: AT5G26980.2 (syntaxin of plants 41 )

HSP 1 Score: 198.7 bits (504), Expect = 3.7e-51
Identity = 114/173 (65.90%), Postives = 145/173 (83.82%), Query Frame = 0


Query: 2   NIRKNVQHSLATELQNLSMDLRRRRSMYLKRLQQQKEGHDGIDLEINLNGNKTLHEDDEY 61
           N+RKNVQ SLAT+LQ LSM+LR+++S YLKRL+QQKE  DG+DLE+NL+ N+   E+D++
Sbjct: 153 NVRKNVQRSLATDLQLLSMELRKKQSTYLKRLRQQKE--DGMDLEMNLSRNRYRPEEDDF 212

Query: 62  GEFGTIENQTMTFGIDEQHIQGREKEIRQVVKSVNELAQIMKDLSTLVIEQGTIVDRIDH 121
           G+    E+Q       E+    REKEI+QVV+SVN+LAQIMKDLS LVI+QGTIVDRID+
Sbjct: 213 GDM-LNEHQMSKIKKSEEVSVEREKEIQQVVESVNDLAQIMKDLSALVIDQGTIVDRIDY 272

Query: 122 NIQNVATTVEEGYKQLQKAEKTQKDGGMVKCATVLVIMCFVMLVLLILKEIIM 175
           NI+NVATTVE+G KQLQKAE+TQ+ GGMVKCA+VLVI+CF+ML+LLILKEI +
Sbjct: 273 NIENVATTVEDGLKQLQKAERTQRHGGMVKCASVLVILCFIMLLLLILKEIFL 322

The following BLAST results are available for this feature:

BLAST of Lcy09g019150 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SWH4	3.9e-53	66.09	Syntaxin-42 OS=Arabidopsis thaliana OX=3702 GN=SYP42 PE=1 SV=1	[more]
Q9SUJ1	8.1e-51	65.90	Syntaxin-43 OS=Arabidopsis thaliana OX=3702 GN=SYP43 PE=2 SV=2	[more]
O65359	5.3e-50	65.90	Syntaxin-41 OS=Arabidopsis thaliana OX=3702 GN=SYP41 PE=1 SV=1	[more]
Q8BVI5	5.9e-17	35.71	Syntaxin-16 OS=Mus musculus OX=10090 GN=Stx16 PE=1 SV=3	[more]
O14662	1.3e-16	34.76	Syntaxin-16 OS=Homo sapiens OX=9606 GN=STX16 PE=1 SV=3	[more]

BLAST of Lcy09g019150 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CT59	1.1e-74	91.33	syntaxin-42-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111013977 PE=3 ...	[more]
A0A6J1CR44	1.1e-74	91.33	syntaxin-42-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111013977 PE=3 ...	[more]
A0A6J1GR78	2.1e-73	87.36	syntaxin-41-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111456390 PE=3 S...	[more]
A0A6J1GRK4	2.1e-73	87.36	syntaxin-41-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111456390 PE=3 S...	[more]
A0A6J1JVK5	4.6e-73	86.78	syntaxin-42-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111487948 PE=3 SV=...	[more]

BLAST of Lcy09g019150 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022144257.1	2.3e-74	91.33	syntaxin-42-like isoform X2 [Momordica charantia]	[more]
XP_022144250.1	2.3e-74	91.33	syntaxin-42-like isoform X1 [Momordica charantia]	[more]
XP_023548705.1	4.3e-73	87.36	syntaxin-42-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022954000.1	4.3e-73	87.36	syntaxin-41-like isoform X2 [Cucurbita moschata]	[more]
XP_022953999.1	4.3e-73	87.36	syntaxin-41-like isoform X1 [Cucurbita moschata]	[more]

BLAST of Lcy09g019150 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G02195.1	2.8e-54	66.09	syntaxin of plants 42	[more]
AT3G05710.1	5.8e-52	65.90	syntaxin of plants 43	[more]
AT3G05710.2	5.8e-52	65.90	syntaxin of plants 43	[more]
AT5G26980.1	3.7e-51	65.90	syntaxin of plants 41	[more]
AT5G26980.2	3.7e-51	65.90	syntaxin of plants 41	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000727	Target SNARE coiled-coil homology domain	SMART	SM00397	tSNARE_6	coord: 73..140 e-value: 5.2E-11 score: 52.6
IPR000727	Target SNARE coiled-coil homology domain	PFAM	PF05739	SNARE	coord: 114..166 e-value: 8.9E-16 score: 57.6
IPR000727	Target SNARE coiled-coil homology domain	PROSITE	PS50192	T_SNARE	coord: 78..140 score: 17.25169
None	No IPR available	GENE3D	1.20.58.70		coord: 1..132 e-value: 3.3E-26 score: 94.3
None	No IPR available	PANTHER	PTHR19957	SYNTAXIN	coord: 2..170
None	No IPR available	PANTHER	PTHR19957:SF249	SYNTAXIN OF PLANTS PROTEIN	coord: 2..170
None	No IPR available	CDD	cd15845	SNARE_syntaxin16	coord: 81..139 e-value: 3.5726E-25 score: 90.2106
IPR006012	Syntaxin/epimorphin, conserved site	PROSITE	PS00914	SYNTAXIN	coord: 84..123
IPR010989	SNARE	SUPERFAMILY	47661	t-snare proteins	coord: 2..133

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy09g019150.1	Lcy09g019150.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0048278	vesicle docking
biological_process	GO:0006906	vesicle fusion
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0012505	endomembrane system
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0031201	SNARE complex
cellular_component	GO:0016020	membrane
molecular_function	GO:0005484	SNAP receptor activity
molecular_function	GO:0000149	SNARE binding