Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTCTGGAGATTCTTTGGAATATACAATTACTCAGAATCGGGTCAAAAAAGGTTAACTTGGGATCTTCTAAGAAATCTTAAAAGGGTTGACAATCTTCCATGGCTTCTAGGTAGTGACTTTAATGAGATTTTAAGAAATGATGAAAAAGTGGGTGGTCCCCAAAGAGACATAAGGTGTTTGGAAGCTTTTAGGCAAGCTCTAGACGATTGCAATCTAAAAAATATAGATCCCTCTAGAGATCCTTTCACCTGGCATGGGAAAAGAGGTGGTATTCACATCTGGGAAAAGTTGGATCGTTTTCTTTGTGATCCAGAATTTGAAGATCTGTTTGGCTACTATAGAGTGAATAATCTTGACTGGTTGTTTTCGAACCATCGGCCAATTGAGATAATCTTGGATGCTCGAAGGAACAATGGTTTGAGGAACCGAAGGAAGCAATTCAGATTTGAGGAAGTTTGGACAAGGCACGAGGAGTGTAAGGAATTGGTTGAGAAAAATGGCTTATGGAGAGAAGGTCTGACATCTTTATCTTCTCTATCATATGATTTAAATAATGTCTCTAATGCATTAACTAAATGGGGAAGGAATATTAACCAACAGATTAAGAAAAGAATAACAGAATGTAAAAGTGCCCTAAAAGATACTTATAATAGTATTCCCTTTGTTGATTTTGATGTTATTCATGGGATTGAATTTGAGCTTGATAGACTCCTAGAAGAAGAAGAGATATATGGGAAGCAAAGGTCTAGAGAGGAGTGGCTAAAATGGGGGGATAGGAACTCTAAGTGGTTTCATAAAAAAGGCTTCCATTAG
mRNA sequence
ATGGTCTGGAGATTCTTTGGAATATACAATTACTCAGAATCGGGTCAAAAAAGGTTAACTTGGGATCTTCTAAGAAATCTTAAAAGGGTTGACAATCTTCCATGGCTTCTAGGTAGTGACTTTAATGAGATTTTAAGAAATGATGAAAAAGTGGGTGGTCCCCAAAGAGACATAAGGTGTTTGGAAGCTTTTAGGCAAGCTCTAGACGATTGCAATCTAAAAAATATAGATCCCTCTAGAGATCCTTTCACCTGGCATGGGAAAAGAGGTGGTATTCACATCTGGGAAAAGTTGGATCGTTTTCTTTGTGATCCAGAATTTGAAGATCTGTTTGGCTACTATAGAGTGAATAATCTTGACTGGTTGTTTTCGAACCATCGGCCAATTGAGATAATCTTGGATGCTCGAAGGAACAATGGTTTGAGGAACCGAAGGAAGCAATTCAGATTTGAGGAAGTTTGGACAAGGCACGAGGAGTGTAAGGAATTGGTTGAGAAAAATGGCTTATGGAGAGAAGGTCTGACATCTTTATCTTCTCTATCATATGATTTAAATAATGTCTCTAATGCATTAACTAAATGGGGAAGGAATATTAACCAACAGATTAAGAAAAGAATAACAGAATGTAAAAGTGCCCTAAAAGATACTTATAATAGTATTCCCTTTGTTGATTTTGATGTTATTCATGGGATTGAATTTGAGCTTGATAGACTCCTAGAAGAAGAAGAGATATATGGGAAGCAAAGGTCTAGAGAGGAGTGGCTAAAATGGGGGGATAGGAACTCTAAGTGGTTTCATAAAAAAGGCTTCCATTAG
Coding sequence (CDS)
ATGGTCTGGAGATTCTTTGGAATATACAATTACTCAGAATCGGGTCAAAAAAGGTTAACTTGGGATCTTCTAAGAAATCTTAAAAGGGTTGACAATCTTCCATGGCTTCTAGGTAGTGACTTTAATGAGATTTTAAGAAATGATGAAAAAGTGGGTGGTCCCCAAAGAGACATAAGGTGTTTGGAAGCTTTTAGGCAAGCTCTAGACGATTGCAATCTAAAAAATATAGATCCCTCTAGAGATCCTTTCACCTGGCATGGGAAAAGAGGTGGTATTCACATCTGGGAAAAGTTGGATCGTTTTCTTTGTGATCCAGAATTTGAAGATCTGTTTGGCTACTATAGAGTGAATAATCTTGACTGGTTGTTTTCGAACCATCGGCCAATTGAGATAATCTTGGATGCTCGAAGGAACAATGGTTTGAGGAACCGAAGGAAGCAATTCAGATTTGAGGAAGTTTGGACAAGGCACGAGGAGTGTAAGGAATTGGTTGAGAAAAATGGCTTATGGAGAGAAGGTCTGACATCTTTATCTTCTCTATCATATGATTTAAATAATGTCTCTAATGCATTAACTAAATGGGGAAGGAATATTAACCAACAGATTAAGAAAAGAATAACAGAATGTAAAAGTGCCCTAAAAGATACTTATAATAGTATTCCCTTTGTTGATTTTGATGTTATTCATGGGATTGAATTTGAGCTTGATAGACTCCTAGAAGAAGAAGAGATATATGGGAAGCAAAGGTCTAGAGAGGAGTGGCTAAAATGGGGGGATAGGAACTCTAAGTGGTTTCATAAAAAAGGCTTCCATTAG
Protein sequence
MVWRFFGIYNYSESGQKRLTWDLLRNLKRVDNLPWLLGSDFNEILRNDEKVGGPQRDIRCLEAFRQALDDCNLKNIDPSRDPFTWHGKRGGIHIWEKLDRFLCDPEFEDLFGYYRVNNLDWLFSNHRPIEIILDARRNNGLRNRRKQFRFEEVWTRHEECKELVEKNGLWREGLTSLSSLSYDLNNVSNALTKWGRNINQQIKKRITECKSALKDTYNSIPFVDFDVIHGIEFELDRLLEEEEIYGKQRSREEWLKWGDRNSKWFHKKGFH
Homology
BLAST of Lcy09g018880 vs. ExPASy TrEMBL
Match:
A0A803PV25 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 186.4 bits (472), Expect = 1.6e-43
Identity = 101/272 (37.13%), Postives = 150/272 (55.15%), Query Frame = 0
Query: 3 WRFFGIYNYSESGQKRLTWDLLRNLKRVDNLPWLLGSDFNEILRNDEKVGGPQRDIRCLE 62
W F G Y ++GQ+R +W LLR+L++ PWL DFNEI+ EKVGG R ++
Sbjct: 643 WSFTGFYGNPDAGQRRFSWQLLRDLRKEVQGPWLCIGDFNEIVSLSEKVGGRDRLPGVMD 702
Query: 63 AFRQALDDCNLKNIDPSRDPFTWHGKRGGIHIWEKLDRFLCDPEFEDLFGYYRVNNLDWL 122
F++ LDDC + ++ TW + I E+LDR LC E+ D F ++ LDW
Sbjct: 703 GFKEVLDDCQFIDFSSTKHELTWCNEHSNSRIMERLDRGLCTEEWLDKFEGADISLLDWW 762
Query: 123 FSNHRPIEIILDARRNN---GLRNRRKQFRFEEVWTRHEECKELVEKNGLWREGLTS--L 182
S+HR + + + R + G R+ +F FEE W + EEC E+V++ LW E S +
Sbjct: 763 ESDHRALVVDIPVRLDGDKCGKAKRKSRFHFEEAWCQEEECTEIVDR--LWSEENVSGRV 822
Query: 183 SSLSYDLNNVSNALTKWGRNINQQIKKRITECKSALKD-TYNSIPFVDFDVIHGIEFELD 242
S +N AL W R ++ + + K AL + T P V ++ I +E +L+
Sbjct: 823 GSFRCKINKCGKALQTWNRKKKSKLNSEVEKLKKALHELTMMQQPGV-WETIQQMEAKLN 882
Query: 243 RLLEEEEIYGKQRSREEWLKWGDRNSKWFHKK 269
LLE++E Y +QRSR WL+WGDRN+K+FH K
Sbjct: 883 GLLEKDEQYWRQRSRALWLQWGDRNTKYFHHK 911
BLAST of Lcy09g018880 vs. ExPASy TrEMBL
Match:
A0A7J6GL46 (CCHC-type domain-containing protein OS=Cannabis sativa OX=3483 GN=F8388_014122 PE=4 SV=1)
HSP 1 Score: 184.9 bits (468), Expect = 4.5e-43
Identity = 100/270 (37.04%), Postives = 153/270 (56.67%), Query Frame = 0
Query: 2 VWRFFGIYNYSESGQKRLTWDLLRNLKRVDNLPWLLGSDFNEILRNDEKVGGPQRDIRCL 61
+WRF G Y ++ + +W LL LK + +LPW+ G DFNEIL +EK GG R + +
Sbjct: 565 LWRFTGFYGNPKASCRSESWRLLCRLKDLFDLPWICGGDFNEILSINEKKGGSDRSMSAM 624
Query: 62 EAFRQALDDCNLKNIDPSRDPFTWHGKR-GGIHIWEKLDRFLCDPEFEDLFGYYRVNNLD 121
F+ ALD C+L ++ FTW KR GG H+ E+LDR+ C+ + DLF + +V N D
Sbjct: 625 TEFQNALDRCSLADLGFEGQCFTWLNKRQGGAHVQERLDRYFCNQRWHDLFPFVKVLNGD 684
Query: 122 WLFSNHRPIEIILDARRNNGLRNRRKQFRFEEVWTRHEECKELVEKNGLWRE-GLTSLSS 181
+L S+HRPI L+ ++++ FRFE W + EC+E++ ++ L + L + S
Sbjct: 685 FLNSDHRPIVATLENVSRRQRYDKKRCFRFETHWLKDPECQEIINRSWLSLDCPLANQDS 744
Query: 182 LSYDLNNVSNALTKWGRNINQQIKKRITECKSALKDTYN-SIPFVDFDVIHGIEFELDRL 241
L ++ L W ++ + +++ E + L D + S P V + + IE +L+ L
Sbjct: 745 LIDIFGLCADQLGMWNKSKYGSLPRQVRETQKQLDDLLSVSAPLVRMEEVRRIEVKLNDL 804
Query: 242 LEEEEIYGKQRSREEWLKWGDRNSKWFHKK 269
L EE Y K RSR EWL GDRN+K+FH K
Sbjct: 805 LSREECYWKIRSRAEWLAHGDRNTKYFHNK 834
BLAST of Lcy09g018880 vs. ExPASy TrEMBL
Match:
A0A803PI64 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 182.2 bits (461), Expect = 2.9e-42
Identity = 101/271 (37.27%), Postives = 150/271 (55.35%), Query Frame = 0
Query: 3 WRFFGIYNYSESGQKRLTWDLLRNLKRVDNLPWLLGSDFNEILRNDEKVGGPQRDIRCLE 62
W Y S++ Q+R +W+LLRN+KR + PWL DFNEI+ EKVGG R +E
Sbjct: 340 WSLTCFYGNSDASQRRFSWELLRNIKREIHGPWLCVGDFNEIVSLAEKVGGRVRSAGAME 399
Query: 63 AFRQALDDCNLKNIDPSRDPFTWHGKRGGIHIWEKLDRFLCDPEFEDLFGYYRVNNLDWL 122
FR+ +DDC L ++ TW + E+LDR LC+ E+ F + LDW
Sbjct: 400 EFREVIDDCRLIYFSSNKSDLTWCNGHESNTVMERLDRGLCNEEWLLSFDGADIQVLDWW 459
Query: 123 FSNHRP--IEIILDARRNNGLRNRRK-QFRFEEVWTRHEECKELVEKNGLWREGLTSLSS 182
S+H+P +++ L N +N +K +F FEE W ++CKE+VEKN WRE +S
Sbjct: 460 ESDHKPLVVDMPLVNDENGEAKNTKKGRFHFEEAWCEEDQCKEIVEKN--WREWDVVISG 519
Query: 183 LSY--DLNNVSNALTKWGRNINQQIKKRITECKSALKDTYNSIPFVDFDVIHGIEFELDR 242
Y V AL W R + + ++I + K+ L + +S + + IE +L+
Sbjct: 520 GDYKRKTGEVGRALDSWNRKKKKVLNQKIKKLKTTLIELSSSSDPGAWVEVKKIEKQLNA 579
Query: 243 LLEEEEIYGKQRSREEWLKWGDRNSKWFHKK 269
+LE++E Y +QRSR WLKWGD N+K+FH+K
Sbjct: 580 VLEKDEKYWRQRSRALWLKWGDLNTKFFHRK 608
BLAST of Lcy09g018880 vs. ExPASy TrEMBL
Match:
A0A803PWX1 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 178.3 bits (451), Expect = 4.2e-41
Identity = 96/270 (35.56%), Postives = 142/270 (52.59%), Query Frame = 0
Query: 3 WRFFGIYNYSESGQKRLTWDLLRNLKRVDNLPWLLGSDFNEILRNDEKVGGPQRDIRCLE 62
W G Y E+ ++ +W LLRNLK+ PWL DFNEI+ EK+GG R ++
Sbjct: 636 WYLTGFYGNPEASLRKFSWQLLRNLKKEVQGPWLCVGDFNEIVSLAEKIGGRDRPPEAMD 695
Query: 63 AFRQALDDCNLKNIDPSRDPFTWHGKRGGIHIWEKLDRFLCDPEFEDLFGYYRVNNLDWL 122
F++ +DDC + S+ TW + I E+LDR LC+ E+ F V LDW
Sbjct: 696 GFKEVIDDCRFIDFGSSKHELTWCNEHNSSQIMERLDRGLCNEEWLRQFEGADVQLLDWW 755
Query: 123 FSNHRPIEIILDARRNN---GLRNRRKQFRFEEVWTRHEECKELVEKNGLWREGLTSLSS 182
S+HR + I + R + G R+ +F FEE W + EEC E+++ R+G S
Sbjct: 756 ESDHRALVINIPVRVDGDKCGKAKRKNRFHFEEAWCQEEECTEIIDNMWKERQGRGRPVS 815
Query: 183 LSYDLNNVSNALTKWGRNINQQIKKRITECKSALKD-TYNSIPFVDFDVIHGIEFELDRL 242
+N AL W + ++ I + K L + T P V ++ I +E +L+ L
Sbjct: 816 FRCKINKCGKALQDWNKKKKARLNNEIAKTKKILHELTMQQQPGV-WEAIQHMEDKLNGL 875
Query: 243 LEEEEIYGKQRSREEWLKWGDRNSKWFHKK 269
LE++E Y +QRSR WL+WGDRN+K+FH K
Sbjct: 876 LEKDEQYWRQRSRALWLQWGDRNTKYFHHK 904
BLAST of Lcy09g018880 vs. ExPASy TrEMBL
Match:
A0A2P6SDG4 (Putative RNA-directed DNA polymerase OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr1g0340391 PE=4 SV=1)
HSP 1 Score: 176.0 bits (445), Expect = 2.1e-40
Identity = 92/269 (34.20%), Postives = 151/269 (56.13%), Query Frame = 0
Query: 3 WRFFGIYNYSESGQKRLTWDLLRNLKRVDNLPWLLGSDFNEILRNDEKVGGPQRDIRCLE 62
WRF G+Y + ++G++ TW+LL+ L NLPW++G D+NEI +K+GG R +R +
Sbjct: 111 WRFTGVYGFPKAGERSRTWNLLKQLSMHGNLPWVVGGDYNEICERSDKMGGVLRSVRLMN 170
Query: 63 AFRQALDDCNLKNIDPSRDPFTWHGKRGGIHIWEKLDRFLCDPEFEDLFGYYRVNNLDWL 122
++AL C L +I FTW G RGG + +LDRF C + DLF RV +LD
Sbjct: 171 DMKEALVFCELDDIQFVGPRFTWRGIRGGEEVRVRLDRFTCSLPWRDLFPASRVRHLDPS 230
Query: 123 FSNHRPIEIILDARRNNGLRNRRKQFRFEEVWTRHEECKELVEKNGLWREGLTSLSSLSY 182
S+H PI + + ++ + ++K+F+FEE W E CKE+V+ + G+ L
Sbjct: 231 TSDHVPILLEVRIQKKRRKKRKKKRFKFEECWLLDETCKEVVKSSWESVSGVGPTQLLWN 290
Query: 183 DLNNVSNALTKWGRNINQQIKKRITECKSALKDTYN---SIPFVDFDVIHGIEFELDRLL 242
+ + AL W I+K I + ++ L Y+ S P + V ++ +L+ LL
Sbjct: 291 RMQSTRAALESWSEKSFGCIRKEIAKIRNQLSVFYDSSLSAPLEEDRV--ALQLKLNDLL 350
Query: 243 EEEEIYGKQRSREEWLKWGDRNSKWFHKK 269
+E+++ +QR++ WLK GD N+K+FH++
Sbjct: 351 HQEQVFWRQRAKVFWLKDGDLNTKFFHQR 377
BLAST of Lcy09g018880 vs. NCBI nr
Match:
KAF4383622.1 (hypothetical protein F8388_014122 [Cannabis sativa])
HSP 1 Score: 184.9 bits (468), Expect = 9.3e-43
Identity = 100/270 (37.04%), Postives = 153/270 (56.67%), Query Frame = 0
Query: 2 VWRFFGIYNYSESGQKRLTWDLLRNLKRVDNLPWLLGSDFNEILRNDEKVGGPQRDIRCL 61
+WRF G Y ++ + +W LL LK + +LPW+ G DFNEIL +EK GG R + +
Sbjct: 565 LWRFTGFYGNPKASCRSESWRLLCRLKDLFDLPWICGGDFNEILSINEKKGGSDRSMSAM 624
Query: 62 EAFRQALDDCNLKNIDPSRDPFTWHGKR-GGIHIWEKLDRFLCDPEFEDLFGYYRVNNLD 121
F+ ALD C+L ++ FTW KR GG H+ E+LDR+ C+ + DLF + +V N D
Sbjct: 625 TEFQNALDRCSLADLGFEGQCFTWLNKRQGGAHVQERLDRYFCNQRWHDLFPFVKVLNGD 684
Query: 122 WLFSNHRPIEIILDARRNNGLRNRRKQFRFEEVWTRHEECKELVEKNGLWRE-GLTSLSS 181
+L S+HRPI L+ ++++ FRFE W + EC+E++ ++ L + L + S
Sbjct: 685 FLNSDHRPIVATLENVSRRQRYDKKRCFRFETHWLKDPECQEIINRSWLSLDCPLANQDS 744
Query: 182 LSYDLNNVSNALTKWGRNINQQIKKRITECKSALKDTYN-SIPFVDFDVIHGIEFELDRL 241
L ++ L W ++ + +++ E + L D + S P V + + IE +L+ L
Sbjct: 745 LIDIFGLCADQLGMWNKSKYGSLPRQVRETQKQLDDLLSVSAPLVRMEEVRRIEVKLNDL 804
Query: 242 LEEEEIYGKQRSREEWLKWGDRNSKWFHKK 269
L EE Y K RSR EWL GDRN+K+FH K
Sbjct: 805 LSREECYWKIRSRAEWLAHGDRNTKYFHNK 834
BLAST of Lcy09g018880 vs. NCBI nr
Match:
XP_030479239.1 (uncharacterized protein LOC115696480 [Cannabis sativa])
HSP 1 Score: 177.9 bits (450), Expect = 1.1e-40
Identity = 99/273 (36.26%), Postives = 158/273 (57.88%), Query Frame = 0
Query: 3 WRFFGIYNYSESGQKRLTWDLLRNLK-RVDNLPWLLGSDFNEILRNDEKVGGPQRDIRCL 62
+ F Y E+ Q+ TW+LLR+ ++PWL+ DFNE+L ND+K GGP R + +
Sbjct: 100 YHFTAFYGSPETNQRIQTWNLLRSFAIASQDVPWLIMGDFNELLSNDDKEGGPLRREQLM 159
Query: 63 EAFRQALDDCNLKNIDPSRDPFTWHGKR-GGIHIWEKLDRFLCDPEFEDLFGYYRVNNLD 122
E FR+++DDC + +D + + FTW K G+ + E+LDR + ++++ F R+++LD
Sbjct: 160 EDFRKSIDDCGVTPLDYTGNKFTWSNKNYNGLLVKERLDRGFINGKWKEFFSDNRIHHLD 219
Query: 123 WLFSNHRPIEIILDARRNNGLRNR-RKQFRFEEVWTRHEECKELVEKNGLWREGLTS--L 182
+ S+HR I + + + R R +FRFE+ W + EEC+ L+ N W+ GLT+ L
Sbjct: 220 YYSSDHRAIALNISMLTQDQPDFRPRNRFRFEQFWLKDEECRNLIVNN--WKSGLTTDPL 279
Query: 183 SSLSYDLNNVSNALTKWGRNINQQIKKRITECKSALKDTYNSIPFVDFDVIHGIEFE--L 242
SL ++N+ S AL W N Q+K I + + + +N F + E L
Sbjct: 280 PSLLQNINSCSTALQTWHNNKYGQMKHDINKAQKKAAEMHNLSVFSTDQHTQMVNAEKVL 339
Query: 243 DRLLEEEEIYGKQRSREEWLKWGDRNSKWFHKK 269
D LLE+EE+Y +QR+R +WLK GD N+K+FH +
Sbjct: 340 DDLLEKEELYWQQRARVDWLKSGDANTKFFHSR 370
BLAST of Lcy09g018880 vs. NCBI nr
Match:
PRQ56718.1 (putative RNA-directed DNA polymerase [Rosa chinensis])
HSP 1 Score: 176.0 bits (445), Expect = 4.3e-40
Identity = 92/269 (34.20%), Postives = 151/269 (56.13%), Query Frame = 0
Query: 3 WRFFGIYNYSESGQKRLTWDLLRNLKRVDNLPWLLGSDFNEILRNDEKVGGPQRDIRCLE 62
WRF G+Y + ++G++ TW+LL+ L NLPW++G D+NEI +K+GG R +R +
Sbjct: 111 WRFTGVYGFPKAGERSRTWNLLKQLSMHGNLPWVVGGDYNEICERSDKMGGVLRSVRLMN 170
Query: 63 AFRQALDDCNLKNIDPSRDPFTWHGKRGGIHIWEKLDRFLCDPEFEDLFGYYRVNNLDWL 122
++AL C L +I FTW G RGG + +LDRF C + DLF RV +LD
Sbjct: 171 DMKEALVFCELDDIQFVGPRFTWRGIRGGEEVRVRLDRFTCSLPWRDLFPASRVRHLDPS 230
Query: 123 FSNHRPIEIILDARRNNGLRNRRKQFRFEEVWTRHEECKELVEKNGLWREGLTSLSSLSY 182
S+H PI + + ++ + ++K+F+FEE W E CKE+V+ + G+ L
Sbjct: 231 TSDHVPILLEVRIQKKRRKKRKKKRFKFEECWLLDETCKEVVKSSWESVSGVGPTQLLWN 290
Query: 183 DLNNVSNALTKWGRNINQQIKKRITECKSALKDTYN---SIPFVDFDVIHGIEFELDRLL 242
+ + AL W I+K I + ++ L Y+ S P + V ++ +L+ LL
Sbjct: 291 RMQSTRAALESWSEKSFGCIRKEIAKIRNQLSVFYDSSLSAPLEEDRV--ALQLKLNDLL 350
Query: 243 EEEEIYGKQRSREEWLKWGDRNSKWFHKK 269
+E+++ +QR++ WLK GD N+K+FH++
Sbjct: 351 HQEQVFWRQRAKVFWLKDGDLNTKFFHQR 377
BLAST of Lcy09g018880 vs. NCBI nr
Match:
XP_024037590.1 (uncharacterized protein LOC112097210 [Citrus clementina])
HSP 1 Score: 175.3 bits (443), Expect = 7.4e-40
Identity = 100/275 (36.36%), Postives = 153/275 (55.64%), Query Frame = 0
Query: 2 VWRFFGIYNYSESGQKRLTWDLLRNLKRVDNLPWLLGSDFNEILRNDEKVGGPQRDIRCL 61
+WR GIY + E+ QKR TW LLR L + PWL DFNEIL +EK+GG R++ +
Sbjct: 53 IWRCSGIYGHPETIQKRHTWTLLRRLAGMFTWPWLCFGDFNEILHPNEKLGGKDRNLDMV 112
Query: 62 EAFRQALDDCNLKNIDPSRDPFTWHGKRGGIH-IWEKLDRFLCDPEFEDLFGYYRVNNLD 121
AFR+ ++DCNL ++ PFTW +R G I E+LDRFL ++E V+NLD
Sbjct: 113 AAFRETVNDCNLIDLGCRGYPFTWSNRRFGPQLIEERLDRFLGSKDWEQSPYNLIVSNLD 172
Query: 122 WLFSNHRPIEIILDARRNNG--LRNRRKQFRFEEVWTRHEECKELVE----KNGLWREGL 181
S+H P+ + + R +N + +E++W+ +E CK +V+ K G W +G
Sbjct: 173 TWCSDHSPVMLEMQERNKFAWYKKNSSPRVFYEDMWSHYEVCKNIVKEEWLKGGSWSQG- 232
Query: 182 TSLSSLSYDLNNVSNALTKWGRNINQQIKKRITECKSALKD-TYNSIPFVDFDVIHGIEF 241
++ NN L W RN K+++ + K L + +N + I E
Sbjct: 233 DPVTIFKKTSNNCLAQLRIWSRNEFDGQKEKLKQLKKKLSEMKHNFTQREEVSEIKSTEE 292
Query: 242 ELDRLLEEEEIYGKQRSREEWLKWGDRNSKWFHKK 269
+++++L +EE+Y KQRSR +WLK GD+N+K+FH K
Sbjct: 293 QIEKMLLDEEVYWKQRSRADWLKEGDKNTKYFHSK 326
BLAST of Lcy09g018880 vs. NCBI nr
Match:
XP_018859783.1 (uncharacterized protein LOC109021580 [Juglans regia] >KAF5468190.1 hypothetical protein F2P56_012365 [Juglans regia])
HSP 1 Score: 169.9 bits (429), Expect = 3.1e-38
Identity = 98/269 (36.43%), Postives = 148/269 (55.02%), Query Frame = 0
Query: 3 WRFFGIYNYSESGQKRLTWDLLRNLKRVDNLPWLLGSDFNEILRNDEKVGGPQRDIRCLE 62
W F GIY +S + + TW LL +L R+ + PWLL DFNEIL +EK GG +R +E
Sbjct: 59 WVFSGIYGHSVTASRHETWGLLHHLCRLTSCPWLLMGDFNEILEPNEKRGGNRRSEGLME 118
Query: 63 AFRQALDDCNLKNIDPSRDP-FTW-HGKRGGIHIWEKLDRFLCDPEFEDLFGYYRVNNLD 122
FR AL DCNL+++ SR P FTW +G+ G IWE+LDR L P++ + F ++V++
Sbjct: 119 HFRAALIDCNLQDLGFSRGPYFTWCNGREGEGCIWERLDRCLASPDWVEAFPNFQVSHGS 178
Query: 123 WLFSNHRPIEIILDARRNNGLRNRRKQFRFEEVWTRHEECKELVEKNGLWREGLTSLSSL 182
+S+H P I L+ + R+K FRFE +W HEEC+ +++ EG ++ +
Sbjct: 179 VSYSDHLP--IWLNTEGVSQYDRRKKMFRFESMWVGHEECEAIIKDVWQNEEGRGNMVAT 238
Query: 183 SYDLNNVSNALTKWGRNINQQIKKRITECKSALKDTYNSIP-FVDFDVIHGIEFELDRLL 242
+ ++ L W R + K + + K L+ P V+ + + E+ L
Sbjct: 239 MRRVKECNSKLDNWNRTRFGLVHKNLAKAKDKLQTLQEEDPNCVEAENLKAPRKEVQLWL 298
Query: 243 EEEEIYGKQRSREEWLKWGDRNSKWFHKK 269
E +E+ KQRSR WL GD+NSK+ H K
Sbjct: 299 ERDELLWKQRSRVLWLHSGDKNSKYLHSK 325
BLAST of Lcy09g018880 vs. TAIR 10
Match:
AT1G43760.1 (DNAse I-like superfamily protein )
HSP 1 Score: 66.2 bits (160), Expect = 4.5e-11
Identity = 72/282 (25.53%), Postives = 122/282 (43.26%), Query Frame = 0
Query: 3 WRFFGIYNYSESGQKRLTWD---LLRNLKRVDNLPWLLGSDFNEILRNDEKVGGPQRDI- 62
WR Y SE G+ + WD + K+ D L L+G DF++I + Q I
Sbjct: 187 WRLDTNYCCSELGRIWIVWDPSVSVLVFKKTDQLMILVG-DFDQIAATSDHYSVLQTSIP 246
Query: 63 -RCLEAFRQALDDCNLKNIDPSRDPFTWHGKRGGIHIWEKLDRFLCDPE----FEDLFGY 122
R LE F+ L D +L +I +TW + I KLDR + + + F
Sbjct: 247 MRGLEEFQNCLRDSDLVDIPSRGVHYTWSNHQDDNPIIRKLDRAIANGDWFSSFPSAIAV 306
Query: 123 YRVNNLDWLFSNHRPIEIILDARRNNGLRNRRKQFRFEEVWTRHEECKELVEKNGLWREG 182
+ ++ + S+H P IIL+ N + +K FR+ + H LV W E
Sbjct: 307 FELSGV----SDHSPCIIILE----NLPKRSKKCFRYFSFLSTHPTF--LVSLTVAWEEQ 366
Query: 183 LTSLSSLSYDLNNVSNALTKWGRNINQQ----IKKRITECKSALKDTYNSIPFVDFDVIH 242
+ + S + L A K + +N+Q I+ + E +L+ + + D +
Sbjct: 367 I-PVGSHMFSLGEHLKAAKKCCKLLNRQGFGNIQHKTKEALDSLESIQSQLLTNPSDSLF 426
Query: 243 GIEF----ELDRLLEEEEIYGKQRSREEWLKWGDRNSKWFHK 268
+E + + E + +Q+SR +WL+ GD N+++FHK
Sbjct: 427 RVEHVARKKWNFFAAALESFYRQKSRIKWLQDGDANTRFFHK 456
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A803PV25 | 1.6e-43 | 37.13 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A7J6GL46 | 4.5e-43 | 37.04 | CCHC-type domain-containing protein OS=Cannabis sativa OX=3483 GN=F8388_014122 P... | [more] |
A0A803PI64 | 2.9e-42 | 37.27 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A803PWX1 | 4.2e-41 | 35.56 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A2P6SDG4 | 2.1e-40 | 34.20 | Putative RNA-directed DNA polymerase OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr1... | [more] |
Match Name | E-value | Identity | Description | |
KAF4383622.1 | 9.3e-43 | 37.04 | hypothetical protein F8388_014122 [Cannabis sativa] | [more] |
XP_030479239.1 | 1.1e-40 | 36.26 | uncharacterized protein LOC115696480 [Cannabis sativa] | [more] |
PRQ56718.1 | 4.3e-40 | 34.20 | putative RNA-directed DNA polymerase [Rosa chinensis] | [more] |
XP_024037590.1 | 7.4e-40 | 36.36 | uncharacterized protein LOC112097210 [Citrus clementina] | [more] |
XP_018859783.1 | 3.1e-38 | 36.43 | uncharacterized protein LOC109021580 [Juglans regia] >KAF5468190.1 hypothetical ... | [more] |
Match Name | E-value | Identity | Description | |
AT1G43760.1 | 4.5e-11 | 25.53 | DNAse I-like superfamily protein | [more] |