Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTGAACTGGCATCCATCCACATTTTAATTTCGTTTCAATTTACTAAAAGCACATCATCTCGAAATCTGGACCCTCCCTATTCCCCATTTCCATTTCTGCATCTATTTAAACCTCTGCGTGGCCTCTTCTAACTCAGGCTTCTTCTCTTTGTTTTGAGTTGCCCACCACCTGTTCGACAAATGGCCTCAAGGGCCAATCTCTTCGTTTTTAGCTTCTTTCTTGTACTTGGCTCATGGGTATCCCTCATTTTCTCTTAAAATCTCTTGGGTGTTGAGACCAGTTTGTGTTTTTTTTTTTTTTTTTTTTGTTTACATTCCATGATTTGAGATCGAGTTGTTGTCTTTCCTTTGCAGGATTCAGCCAATGCCAACGCCAATGGACTGTCCCAAGAGAAGGTGATTTGATTAGCTTTTGTAGCACTCAAACTTGTTGCTTTTCTTGTCGTTCTTTGCTGTTCTGTTCAGTCATTCAAGGATTAGAATCACATTTTTGAGTTGTCTTTTAGTAACACAGCTAGATTTTGCTATTTGGCTTTGCACTACAGGCTGCTGTTTACCCCAAGGTCCCTGTTCCAGTTCCAGCTCCAGCTCTTTCTCCTCCAGTTTACAAAGCTCCGCCGCCAGCGCCGCCTGTGAAGCCACTGCCACCGCCAGTGAAGCCACTTCCGCCGGTTAAGCCACCAACTACCCCTGTTTCGACGCCACCGCCAGTTAAGGCACCATACACCCCTGTTCCACCACCTCCTTATACTCCTCCTCCGCCGCCGGTGAAAGCACCGTACACTCCTCCACCGGTGAAGGCACCGCCATCTCCGCCGCCCCCGGCGAAGGCTCCTTACACTCCATCTCCTCCGGTGAAGCCACCTGTTCCACCTGTGAAGCCGCTGCCACCAGCAGCTCCTAAGCCACCGCCAGTGTCCAGCAAGGGTAAAGAATCTTCTCGACATCTTCAACTCATCTTTTTTCTTCATTTGGGTTTCTGCATCATTTTGAACTTGTCTGAAACACTGATTTTTGTTTTTGGATGTGGAAACAGAATGCTACCCACAATGTGGAAGAAGATGCCAACTCCATTCAAGGAAAAGGGTATGCATAAGGGCGTGTGTGACCTGCTGCTACCGCTGCAAGTGTGTTCCACCAGGGACTTATGGCAACAGGGAAGTATGTGGAAAGTGCTACACTGATATGACCACTCATGGCAACAGAATCAAGTGTCCTTAAGAAAGAAGAACATACAGAGCTTTTATTCAAGGGTTTCTTTTTGGTCTGTAAGCCGCTGCTTGCATCCATGAGGAGAGTGAGAAAATAAAAAGGGTTTTCTGCTTTTCCAAAAGGGTCTTTGGAACTACTGAAAAGAGCACATAGAAAGATTAGGCCATGGCTAGCTTGCTCATAGTTATAATATATTAATATGCTCTGTTTTTGAGTGTTTCAGTTTCATGTATGATAATTAATGGTGGTATT
mRNA sequence
TCTGAACTGGCATCCATCCACATTTTAATTTCGTTTCAATTTACTAAAAGCACATCATCTCGAAATCTGGACCCTCCCTATTCCCCATTTCCATTTCTGCATCTATTTAAACCTCTGCGTGGCCTCTTCTAACTCAGGCTTCTTCTCTTTGTTTTGAGTTGCCCACCACCTGTTCGACAAATGGCCTCAAGGGCCAATCTCTTCGTTTTTAGCTTCTTTCTTGTACTTGGCTCATGGGATTCAGCCAATGCCAACGCCAATGGACTGTCCCAAGAGAAGGCTGCTGTTTACCCCAAGGTCCCTGTTCCAGTTCCAGCTCCAGCTCTTTCTCCTCCAGTTTACAAAGCTCCGCCGCCAGCGCCGCCTGTGAAGCCACTGCCACCGCCAGTGAAGCCACTTCCGCCGGTTAAGCCACCAACTACCCCTGTTTCGACGCCACCGCCAGTTAAGGCACCATACACCCCTGTTCCACCACCTCCTTATACTCCTCCTCCGCCGCCGGTGAAAGCACCGTACACTCCTCCACCGGTGAAGGCACCGCCATCTCCGCCGCCCCCGGCGAAGGCTCCTTACACTCCATCTCCTCCGGTGAAGCCACCTGTTCCACCTGTGAAGCCGCTGCCACCAGCAGCTCCTAAGCCACCGCCAGTGTCCAGCAAGGAATGCTACCCACAATGTGGAAGAAGATGCCAACTCCATTCAAGGAAAAGGGTATGCATAAGGGCGTGTGTGACCTGCTGCTACCGCTGCAAGTGTGTTCCACCAGGGACTTATGGCAACAGGGAAGTATGTGGAAAGTGCTACACTGATATGACCACTCATGGCAACAGAATCAAGTGTCCTTAAGAAAGAAGAACATACAGAGCTTTTATTCAAGGGTTTCTTTTTGGTCTGTAAGCCGCTGCTTGCATCCATGAGGAGAGTGAGAAAATAAAAAGGGTTTTCTGCTTTTCCAAAAGGGTCTTTGGAACTACTGAAAAGAGCACATAGAAAGATTAGGCCATGGCTAGCTTGCTCATAGTTATAATATATTAATATGCTCTGTTTTTGAGTGTTTCAGTTTCATGTATGATAATTAATGGTGGTATT
Coding sequence (CDS)
ATGGCCTCAAGGGCCAATCTCTTCGTTTTTAGCTTCTTTCTTGTACTTGGCTCATGGGATTCAGCCAATGCCAACGCCAATGGACTGTCCCAAGAGAAGGCTGCTGTTTACCCCAAGGTCCCTGTTCCAGTTCCAGCTCCAGCTCTTTCTCCTCCAGTTTACAAAGCTCCGCCGCCAGCGCCGCCTGTGAAGCCACTGCCACCGCCAGTGAAGCCACTTCCGCCGGTTAAGCCACCAACTACCCCTGTTTCGACGCCACCGCCAGTTAAGGCACCATACACCCCTGTTCCACCACCTCCTTATACTCCTCCTCCGCCGCCGGTGAAAGCACCGTACACTCCTCCACCGGTGAAGGCACCGCCATCTCCGCCGCCCCCGGCGAAGGCTCCTTACACTCCATCTCCTCCGGTGAAGCCACCTGTTCCACCTGTGAAGCCGCTGCCACCAGCAGCTCCTAAGCCACCGCCAGTGTCCAGCAAGGAATGCTACCCACAATGTGGAAGAAGATGCCAACTCCATTCAAGGAAAAGGGTATGCATAAGGGCGTGTGTGACCTGCTGCTACCGCTGCAAGTGTGTTCCACCAGGGACTTATGGCAACAGGGAAGTATGTGGAAAGTGCTACACTGATATGACCACTCATGGCAACAGAATCAAGTGTCCTTAA
Protein sequence
MASRANLFVFSFFLVLGSWDSANANANGLSQEKAAVYPKVPVPVPAPALSPPVYKAPPPAPPVKPLPPPVKPLPPVKPPTTPVSTPPPVKAPYTPVPPPPYTPPPPPVKAPYTPPPVKAPPSPPPPAKAPYTPSPPVKPPVPPVKPLPPAAPKPPPVSSKECYPQCGRRCQLHSRKRVCIRACVTCCYRCKCVPPGTYGNREVCGKCYTDMTTHGNRIKCP
Homology
BLAST of Lcy09g018840 vs. ExPASy Swiss-Prot
Match:
Q9LFR3 (Gibberellin-regulated protein 14 OS=Arabidopsis thaliana OX=3702 GN=GASA14 PE=1 SV=1)
HSP 1 Score: 126.7 bits (317), Expect = 3.2e-28
Identity = 109/189 (57.67%), Postives = 122/189 (64.55%), Query Frame = 0
Query: 43 PVPAPALSPPVYKAPPPAPPVKP---LPPPVK-PLPPVKPPTT-PVSTP--PPVKAPYTP 102
P+ P + PP YK PP P VKP PP K P P VKPPTT PV P PPV++P P
Sbjct: 96 PIKLPPVQPPTYK--PPTPTVKPPSVQPPTYKPPTPTVKPPTTSPVKPPTTPPVQSP--P 155
Query: 103 VPPPPYTPPPPPVKAPYTPPPVKAPPSPPPPAKAPYT-PSPPVKPP-VPPVKPLPPAAPK 162
V PP Y PP PVK P T PPVK P + PP Y P+ PVKPP PPVKP P
Sbjct: 156 VQPPTYKPPTSPVKPPTTTPPVKPPTTTPPVQPPTYNPPTTPVKPPTAPPVKP-----PT 215
Query: 163 PPPVSSK-ECYPQCGRRCQLHSRKRVCIRACVTCCYRCKCVPPGTYGNREVCGKCYTDMT 222
PPPV ++ +C P CG RC HSRK VC+RACVTCCYRCKCVPPGTYGN+E CG CY +M
Sbjct: 216 PPPVRTRIDCVPLCGTRCGQHSRKNVCMRACVTCCYRCKCVPPGTYGNKEKCGSCYANMK 275
BLAST of Lcy09g018840 vs. ExPASy TrEMBL
Match:
A0A1S3B840 (gibberellin-regulated protein 14 OS=Cucumis melo OX=3656 GN=LOC103487058 PE=3 SV=1)
HSP 1 Score: 296.2 bits (757), Expect = 1.1e-76
Identity = 182/230 (79.13%), Postives = 191/230 (83.04%), Query Frame = 0
Query: 1 MASRANLFVFSFFLVLGSWDSANANANGLSQEKAAVYPKVPVPVPAPALSPPVYKAPPPA 60
MAS ANLFVFS FL+ GSW SANANANGLSQEK AVYP VPVPVP SPPVYK+P PA
Sbjct: 1 MASMANLFVFSVFLLFGSWVSANANANGLSQEKDAVYPHVPVPVP----SPPVYKSPSPA 60
Query: 61 PPVKPLPPPVKPLPPVKPPTTPVSTPPPVKAPYTP-----VPPPPYTPPPPPVKAPYTP- 120
PPVKPLP P PPVKPPTTPV TPPPVKAPYTP +PPPPYT P PPVKAPYTP
Sbjct: 61 PPVKPLP---LPAPPVKPPTTPVLTPPPVKAPYTPAPPVKLPPPPYT-PSPPVKAPYTPS 120
Query: 121 PPVKAPPSPPPPAKAPYTPSPPVKP---PVPPVKPLPPAAPKPPPVSSKECYPQCGRRCQ 180
PPV P S PPPAKAPYTPSPPVKP PVPPVKP PAAP+PPPV K CYP+CGRRCQ
Sbjct: 121 PPVNPPSSSPPPAKAPYTPSPPVKPPYTPVPPVKPPSPAAPRPPPVIGKACYPECGRRCQ 180
Query: 181 LHSRKRVCIRACVTCCYRCKCVPPGTYGNREVCGKCYTDMTTHGNRIKCP 222
LHSRK++C+RACVTCCYRC+CVPPGTYGNREVCGKCYTDMTTHG R KCP
Sbjct: 181 LHSRKKMCLRACVTCCYRCRCVPPGTYGNREVCGKCYTDMTTHGRRNKCP 222
BLAST of Lcy09g018840 vs. ExPASy TrEMBL
Match:
A0A0A0LFE6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G829190 PE=3 SV=1)
HSP 1 Score: 260.4 bits (664), Expect = 6.9e-66
Identity = 167/239 (69.87%), Postives = 178/239 (74.48%), Query Frame = 0
Query: 1 MASRANLFVFSFFLVLGSWDSANANANGLSQEKAAVYPKVPVPVPAPALSPPVYKAPPPA 60
MA ANLFVFS L+ GSW SANANANGLSQ+K AVYP VPVPV AP S PVYKAPP
Sbjct: 1 MALMANLFVFSVLLLSGSWVSANANANGLSQKKDAVYPHVPVPVQAP--STPVYKAPPVK 60
Query: 61 PPVKPL--PPPVKPL-------------PPVKPPTTPVSTPPPVKAPYTPVPPPPYTPPP 120
PP P+ PPP P+ PPVKPPT PV TPPPVKAPYTP PP PP
Sbjct: 61 PPTIPVLTPPPASPVKPPTIPVLTPPPAPPVKPPTIPVLTPPPVKAPYTPAPPVKLPPP- 120
Query: 121 PPVKAPYTPPPVKAPPSPPPPAKAPYTPSPPVKP---PVPPVKPLPPAAPKPPPVSSKEC 180
PYTP P PPS PPPAKAPYTPSPPVKP PVPPVKP PAAP+PPPV K C
Sbjct: 121 -----PYTPSPPVKPPSSPPPAKAPYTPSPPVKPPSTPVPPVKPPSPAAPRPPPVLGKAC 180
Query: 181 YPQCGRRCQLHSRKRVCIRACVTCCYRCKCVPPGTYGNREVCGKCYTDMTTHGNRIKCP 222
YP+CGRRCQLHSRK++C+RAC+TCC RCKCVPPGTYGNREVCGKCYTDMTTHG+R KCP
Sbjct: 181 YPECGRRCQLHSRKKICLRACLTCCDRCKCVPPGTYGNREVCGKCYTDMTTHGSRSKCP 231
BLAST of Lcy09g018840 vs. ExPASy TrEMBL
Match:
A0A6J1J8R5 (gibberellin-regulated protein 14 OS=Cucurbita maxima OX=3661 GN=LOC111482357 PE=3 SV=1)
HSP 1 Score: 250.4 bits (638), Expect = 7.1e-63
Identity = 161/222 (72.52%), Postives = 173/222 (77.93%), Query Frame = 0
Query: 1 MASRANLFVFSFFLVLGSWDSANANANGLSQEKAAVYPKVPVPVPAPALSPPVYKAPPPA 60
M+S ANLFVFS F++L SW A+ANANGLSQEK AVYPKVPVP+PAP SPPVYKAP
Sbjct: 1 MSSMANLFVFSVFVLLASW--ASANANGLSQEKDAVYPKVPVPIPAP--SPPVYKAP--- 60
Query: 61 PPVKPLPPPVKPLPPVKPPTTPVSTPPPVKAPYTPVPPPPYTPPPPPVKAPYTPPPVKAP 120
PLPPVKPPT PV TPPPVKAPYTPVPP PPPP +P PPVKAP
Sbjct: 61 ----------SPLPPVKPPTIPVLTPPPVKAPYTPVPPVK-LPPPPYTPSPPVKPPVKAP 120
Query: 121 PSPPPPAKAPYTPSPPVKPPV-PPVKPLPPAAPKPPPVSSKECYPQCGRRCQLHSRKRVC 180
+P PPAKAP +P PP K PV PPVKP PAAP+PPPV K C P+CGRRCQLHSRK VC
Sbjct: 121 YTPSPPAKAPSSP-PPAKAPVNPPVKPPSPAAPRPPPVIGKACNPECGRRCQLHSRKNVC 180
Query: 181 IRACVTCCYRCKCVPPGTYGNREVCGKCYTDMTTHGNRIKCP 222
IRAC+TCCYRC+CVPPGTYGNREVCGKCYTDMTTHGNR KCP
Sbjct: 181 IRACLTCCYRCRCVPPGTYGNREVCGKCYTDMTTHGNRPKCP 203
BLAST of Lcy09g018840 vs. ExPASy TrEMBL
Match:
A0A6J1F0Y7 (gibberellin-regulated protein 14 OS=Cucurbita moschata OX=3662 GN=LOC111441388 PE=3 SV=1)
HSP 1 Score: 244.2 bits (622), Expect = 5.1e-61
Identity = 159/222 (71.62%), Postives = 170/222 (76.58%), Query Frame = 0
Query: 1 MASRANLFVFSFFLVLGSWDSANANANGLSQEKAAVYPKVPVPVPAPALSPPVYKAPPPA 60
M+S AN FVFS FL+L SW +ANANG+SQ+K AVYPKVPVPV AP SPPVYKAP
Sbjct: 1 MSSMANRFVFSVFLLLASW--VSANANGVSQQKDAVYPKVPVPVSAP--SPPVYKAP--- 60
Query: 61 PPVKPLPPPVKPLPPVKPPTTPVSTPPPVKAPYTPVPPPPYTPPPPPVKAPYTPPPVKAP 120
PLPPVKPPTTPV PPPVKAPYTPVPP PPPP +P PPVKAP
Sbjct: 61 ----------SPLPPVKPPTTPVLIPPPVKAPYTPVPPAK-LPPPPYTPSPPVKPPVKAP 120
Query: 121 PSPPPPAKAPYTPSPPVKPPV-PPVKPLPPAAPKPPPVSSKECYPQCGRRCQLHSRKRVC 180
+P PPAKAP +P PP K PV PPVKP PAAP+PPPV K C P+CGRRCQLHSRK VC
Sbjct: 121 YTPSPPAKAPSSP-PPAKAPVNPPVKPPSPAAPRPPPVIGKACNPECGRRCQLHSRKNVC 180
Query: 181 IRACVTCCYRCKCVPPGTYGNREVCGKCYTDMTTHGNRIKCP 222
IRAC+TCCYRCKCVPPGTYGNREVCGKCYTDMTTHGNR KCP
Sbjct: 181 IRACLTCCYRCKCVPPGTYGNREVCGKCYTDMTTHGNRPKCP 203
BLAST of Lcy09g018840 vs. ExPASy TrEMBL
Match:
A0A6J1D924 (gibberellin-regulated protein 14 OS=Momordica charantia OX=3673 GN=LOC111018378 PE=3 SV=1)
HSP 1 Score: 240.7 bits (613), Expect = 5.7e-60
Identity = 167/254 (65.75%), Postives = 176/254 (69.29%), Query Frame = 0
Query: 1 MASRANLFVFSFFLVLGSWDSANANANGLSQEKA------AVYPKVPVPVPAPALSPPVY 60
MAS ANL++F L+ SW +ANANGLS EK VYPKVPVP P P SPP Y
Sbjct: 13 MASMANLYLFCVVLLFASW--VSANANGLSGEKEEVTLMDVVYPKVPVPAPVP--SPPAY 72
Query: 61 KAPPPAPPVKPLPPPV---------------KPLPPVK---PPTTPVSTP----PPVKAP 120
K P PAPPVKPLPPP P PPVK PPT PV P PPVK P
Sbjct: 73 KEPAPAPPVKPLPPPAPLIKPPAAPPVKAPYTPAPPVKLPPPPTPPVKPPSSPAPPVKPP 132
Query: 121 YTPVPP-PPYTPPPPPVKAPYTP-PPVKAPPSPPPPAKAPYTPSPPVK---PPVPPVKPL 180
+P PP P + P PP KAPY P PPVK P SP PP K PYTPSPPVK P PPV P
Sbjct: 133 SSPAPPVKPPSSPTPPAKAPYVPSPPVKPPSSPAPPVKPPYTPSPPVKAPYTPAPPVNPP 192
Query: 181 PPAAPKPPPVSSKECYPQCGRRCQLHSRKRVCIRACVTCCYRCKCVPPGTYGNREVCGKC 222
PAAPKPPPVS +ECYPQCGRRC+LHSRKRVCIRACVTCCYRCKCVPPGTYGNRE+CGKC
Sbjct: 193 SPAAPKPPPVSGQECYPQCGRRCELHSRKRVCIRACVTCCYRCKCVPPGTYGNRELCGKC 252
BLAST of Lcy09g018840 vs. NCBI nr
Match:
XP_038903485.1 (gibberellin-regulated protein 14 [Benincasa hispida])
HSP 1 Score: 297.7 bits (761), Expect = 8.1e-77
Identity = 186/239 (77.82%), Postives = 196/239 (82.01%), Query Frame = 0
Query: 1 MASRANLFVFSFFLVLGSWDSANANANGLSQEKAAVYPKVPVPVPAPALSPPVYKAPPPA 60
MAS ANLFVFS FL+ GSW +ANANGLS+EK AVYP VPVPV AP SPPVYKAP PA
Sbjct: 1 MASMANLFVFSVFLLFGSW--VSANANGLSEEKVAVYPHVPVPVTAP--SPPVYKAPSPA 60
Query: 61 PPVKPLPPPVKPLPPVKPPTTPVSTPPPVKAPYTPV-----PPPPYTP---------PPP 120
PPVKPLPPP PPVKPPTTPV TPPPVKAPYTPV PPPPYTP PPP
Sbjct: 61 PPVKPLPPPA---PPVKPPTTPVLTPPPVKAPYTPVPPVKLPPPPYTPSPPVKPPSSPPP 120
Query: 121 PVKAPYTPPPVKAPPSPPPPAKAPYTPSPPVKP---PVPPVKPLP-PAAPKPPPVSSKEC 180
PVKAPYTPPPVK P SPPPPAKAPYTPSPPVKP PVPPVKP P PAAP+PPPV K C
Sbjct: 121 PVKAPYTPPPVKPPSSPPPPAKAPYTPSPPVKPPYTPVPPVKPPPSPAAPRPPPVFGKAC 180
Query: 181 YPQCGRRCQLHSRKRVCIRACVTCCYRCKCVPPGTYGNREVCGKCYTDMTTHGNRIKCP 222
+CGRRCQLHSR+++CIRAC+TCCYRCKCVPPGTYGNREVCGKCYTDMTTHG+RIKCP
Sbjct: 181 SAKCGRRCQLHSRRKICIRACLTCCYRCKCVPPGTYGNREVCGKCYTDMTTHGSRIKCP 232
BLAST of Lcy09g018840 vs. NCBI nr
Match:
XP_008443473.1 (PREDICTED: gibberellin-regulated protein 14 [Cucumis melo])
HSP 1 Score: 296.2 bits (757), Expect = 2.3e-76
Identity = 182/230 (79.13%), Postives = 191/230 (83.04%), Query Frame = 0
Query: 1 MASRANLFVFSFFLVLGSWDSANANANGLSQEKAAVYPKVPVPVPAPALSPPVYKAPPPA 60
MAS ANLFVFS FL+ GSW SANANANGLSQEK AVYP VPVPVP SPPVYK+P PA
Sbjct: 1 MASMANLFVFSVFLLFGSWVSANANANGLSQEKDAVYPHVPVPVP----SPPVYKSPSPA 60
Query: 61 PPVKPLPPPVKPLPPVKPPTTPVSTPPPVKAPYTP-----VPPPPYTPPPPPVKAPYTP- 120
PPVKPLP P PPVKPPTTPV TPPPVKAPYTP +PPPPYT P PPVKAPYTP
Sbjct: 61 PPVKPLP---LPAPPVKPPTTPVLTPPPVKAPYTPAPPVKLPPPPYT-PSPPVKAPYTPS 120
Query: 121 PPVKAPPSPPPPAKAPYTPSPPVKP---PVPPVKPLPPAAPKPPPVSSKECYPQCGRRCQ 180
PPV P S PPPAKAPYTPSPPVKP PVPPVKP PAAP+PPPV K CYP+CGRRCQ
Sbjct: 121 PPVNPPSSSPPPAKAPYTPSPPVKPPYTPVPPVKPPSPAAPRPPPVIGKACYPECGRRCQ 180
Query: 181 LHSRKRVCIRACVTCCYRCKCVPPGTYGNREVCGKCYTDMTTHGNRIKCP 222
LHSRK++C+RACVTCCYRC+CVPPGTYGNREVCGKCYTDMTTHG R KCP
Sbjct: 181 LHSRKKMCLRACVTCCYRCRCVPPGTYGNREVCGKCYTDMTTHGRRNKCP 222
BLAST of Lcy09g018840 vs. NCBI nr
Match:
XP_004147446.2 (gibberellin-regulated protein 14 [Cucumis sativus] >KGN59629.1 hypothetical protein Csa_001168 [Cucumis sativus])
HSP 1 Score: 260.4 bits (664), Expect = 1.4e-65
Identity = 167/239 (69.87%), Postives = 178/239 (74.48%), Query Frame = 0
Query: 1 MASRANLFVFSFFLVLGSWDSANANANGLSQEKAAVYPKVPVPVPAPALSPPVYKAPPPA 60
MA ANLFVFS L+ GSW SANANANGLSQ+K AVYP VPVPV AP S PVYKAPP
Sbjct: 1 MALMANLFVFSVLLLSGSWVSANANANGLSQKKDAVYPHVPVPVQAP--STPVYKAPPVK 60
Query: 61 PPVKPL--PPPVKPL-------------PPVKPPTTPVSTPPPVKAPYTPVPPPPYTPPP 120
PP P+ PPP P+ PPVKPPT PV TPPPVKAPYTP PP PP
Sbjct: 61 PPTIPVLTPPPASPVKPPTIPVLTPPPAPPVKPPTIPVLTPPPVKAPYTPAPPVKLPPP- 120
Query: 121 PPVKAPYTPPPVKAPPSPPPPAKAPYTPSPPVKP---PVPPVKPLPPAAPKPPPVSSKEC 180
PYTP P PPS PPPAKAPYTPSPPVKP PVPPVKP PAAP+PPPV K C
Sbjct: 121 -----PYTPSPPVKPPSSPPPAKAPYTPSPPVKPPSTPVPPVKPPSPAAPRPPPVLGKAC 180
Query: 181 YPQCGRRCQLHSRKRVCIRACVTCCYRCKCVPPGTYGNREVCGKCYTDMTTHGNRIKCP 222
YP+CGRRCQLHSRK++C+RAC+TCC RCKCVPPGTYGNREVCGKCYTDMTTHG+R KCP
Sbjct: 181 YPECGRRCQLHSRKKICLRACLTCCDRCKCVPPGTYGNREVCGKCYTDMTTHGSRSKCP 231
BLAST of Lcy09g018840 vs. NCBI nr
Match:
XP_022983874.1 (gibberellin-regulated protein 14 [Cucurbita maxima])
HSP 1 Score: 250.4 bits (638), Expect = 1.5e-62
Identity = 161/222 (72.52%), Postives = 173/222 (77.93%), Query Frame = 0
Query: 1 MASRANLFVFSFFLVLGSWDSANANANGLSQEKAAVYPKVPVPVPAPALSPPVYKAPPPA 60
M+S ANLFVFS F++L SW A+ANANGLSQEK AVYPKVPVP+PAP SPPVYKAP
Sbjct: 1 MSSMANLFVFSVFVLLASW--ASANANGLSQEKDAVYPKVPVPIPAP--SPPVYKAP--- 60
Query: 61 PPVKPLPPPVKPLPPVKPPTTPVSTPPPVKAPYTPVPPPPYTPPPPPVKAPYTPPPVKAP 120
PLPPVKPPT PV TPPPVKAPYTPVPP PPPP +P PPVKAP
Sbjct: 61 ----------SPLPPVKPPTIPVLTPPPVKAPYTPVPPVK-LPPPPYTPSPPVKPPVKAP 120
Query: 121 PSPPPPAKAPYTPSPPVKPPV-PPVKPLPPAAPKPPPVSSKECYPQCGRRCQLHSRKRVC 180
+P PPAKAP +P PP K PV PPVKP PAAP+PPPV K C P+CGRRCQLHSRK VC
Sbjct: 121 YTPSPPAKAPSSP-PPAKAPVNPPVKPPSPAAPRPPPVIGKACNPECGRRCQLHSRKNVC 180
Query: 181 IRACVTCCYRCKCVPPGTYGNREVCGKCYTDMTTHGNRIKCP 222
IRAC+TCCYRC+CVPPGTYGNREVCGKCYTDMTTHGNR KCP
Sbjct: 181 IRACLTCCYRCRCVPPGTYGNREVCGKCYTDMTTHGNRPKCP 203
BLAST of Lcy09g018840 vs. NCBI nr
Match:
XP_023526964.1 (gibberellin-regulated protein 14 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 249.2 bits (635), Expect = 3.3e-62
Identity = 161/222 (72.52%), Postives = 172/222 (77.48%), Query Frame = 0
Query: 1 MASRANLFVFSFFLVLGSWDSANANANGLSQEKAAVYPKVPVPVPAPALSPPVYKAPPPA 60
M+S AN FVFS FL+L SW +ANANG+SQ+K AVYPKVPVPVPAP SPPVYKAP
Sbjct: 1 MSSMANRFVFSVFLLLASW--VSANANGVSQQKDAVYPKVPVPVPAP--SPPVYKAP--- 60
Query: 61 PPVKPLPPPVKPLPPVKPPTTPVSTPPPVKAPYTPVPPPPYTPPPPPVKAPYTPPPVKAP 120
PLPPVKPPTTPV TPPPVKAPYTPVPP PPPP +P PPVKAP
Sbjct: 61 ----------SPLPPVKPPTTPVLTPPPVKAPYTPVPPVK-LPPPPYTPSPPVKPPVKAP 120
Query: 121 PSPPPPAKAPYTPSPPVKPPV-PPVKPLPPAAPKPPPVSSKECYPQCGRRCQLHSRKRVC 180
+P PPAKAP +P PP K PV PPVKP PAAP+PPPV K C P+CGRRCQLHSRK VC
Sbjct: 121 YTPSPPAKAPSSP-PPAKAPVNPPVKPPSPAAPRPPPVIGKACNPECGRRCQLHSRKNVC 180
Query: 181 IRACVTCCYRCKCVPPGTYGNREVCGKCYTDMTTHGNRIKCP 222
IRAC+TCCYRCKCVPPGTYGNREVCGKCYTDMTTHGNR KCP
Sbjct: 181 IRACLTCCYRCKCVPPGTYGNREVCGKCYTDMTTHGNRPKCP 203
BLAST of Lcy09g018840 vs. TAIR 10
Match:
AT5G14920.1 (Gibberellin-regulated family protein )
HSP 1 Score: 126.7 bits (317), Expect = 2.3e-29
Identity = 109/189 (57.67%), Postives = 122/189 (64.55%), Query Frame = 0
Query: 43 PVPAPALSPPVYKAPPPAPPVKP---LPPPVK-PLPPVKPPTT-PVSTP--PPVKAPYTP 102
P+ P + PP YK PP P VKP PP K P P VKPPTT PV P PPV++P P
Sbjct: 96 PIKLPPVQPPTYK--PPTPTVKPPSVQPPTYKPPTPTVKPPTTSPVKPPTTPPVQSP--P 155
Query: 103 VPPPPYTPPPPPVKAPYTPPPVKAPPSPPPPAKAPYT-PSPPVKPP-VPPVKPLPPAAPK 162
V PP Y PP PVK P T PPVK P + PP Y P+ PVKPP PPVKP P
Sbjct: 156 VQPPTYKPPTSPVKPPTTTPPVKPPTTTPPVQPPTYNPPTTPVKPPTAPPVKP-----PT 215
Query: 163 PPPVSSK-ECYPQCGRRCQLHSRKRVCIRACVTCCYRCKCVPPGTYGNREVCGKCYTDMT 222
PPPV ++ +C P CG RC HSRK VC+RACVTCCYRCKCVPPGTYGN+E CG CY +M
Sbjct: 216 PPPVRTRIDCVPLCGTRCGQHSRKNVCMRACVTCCYRCKCVPPGTYGNKEKCGSCYANMK 275
BLAST of Lcy09g018840 vs. TAIR 10
Match:
AT4G15160.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )
HSP 1 Score: 42.0 bits (97), Expect = 7.4e-04
Identity = 62/109 (56.88%), Postives = 64/109 (58.72%), Query Frame = 0
Query: 38 PKVPVPVPAPALSPPVYKAPPPAPPVKPLPPP-VKPLPP--VKPPTTPVSTPPPVKAPYT 97
P +P P P PP K PPP P VKP PPP VKP PP VKPP P PPP PYT
Sbjct: 71 PYIPCPPPPYTPKPPTVK-PPPPPYVKPPPPPTVKPPPPPYVKPPPPPTVKPPPPPTPYT 130
Query: 98 PVPPPPYTPPPPPVKAPYTPPPVKAPPSPPPPAKAPYTPSPPVKPPVPP 144
P PP PYTPPPP VK P PPPV PP P P +AP P PP P PP
Sbjct: 131 PPPPTPYTPPPPTVKPP--PPPVVTPPPPTPTPEAPCPPPPPTPYPPPP 176
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9LFR3 | 3.2e-28 | 57.67 | Gibberellin-regulated protein 14 OS=Arabidopsis thaliana OX=3702 GN=GASA14 PE=1 ... | [more] |
Match Name | E-value | Identity | Description | |
A0A1S3B840 | 1.1e-76 | 79.13 | gibberellin-regulated protein 14 OS=Cucumis melo OX=3656 GN=LOC103487058 PE=3 SV... | [more] |
A0A0A0LFE6 | 6.9e-66 | 69.87 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G829190 PE=3 SV=1 | [more] |
A0A6J1J8R5 | 7.1e-63 | 72.52 | gibberellin-regulated protein 14 OS=Cucurbita maxima OX=3661 GN=LOC111482357 PE=... | [more] |
A0A6J1F0Y7 | 5.1e-61 | 71.62 | gibberellin-regulated protein 14 OS=Cucurbita moschata OX=3662 GN=LOC111441388 P... | [more] |
A0A6J1D924 | 5.7e-60 | 65.75 | gibberellin-regulated protein 14 OS=Momordica charantia OX=3673 GN=LOC111018378 ... | [more] |
Match Name | E-value | Identity | Description | |
XP_038903485.1 | 8.1e-77 | 77.82 | gibberellin-regulated protein 14 [Benincasa hispida] | [more] |
XP_008443473.1 | 2.3e-76 | 79.13 | PREDICTED: gibberellin-regulated protein 14 [Cucumis melo] | [more] |
XP_004147446.2 | 1.4e-65 | 69.87 | gibberellin-regulated protein 14 [Cucumis sativus] >KGN59629.1 hypothetical prot... | [more] |
XP_022983874.1 | 1.5e-62 | 72.52 | gibberellin-regulated protein 14 [Cucurbita maxima] | [more] |
XP_023526964.1 | 3.3e-62 | 72.52 | gibberellin-regulated protein 14 [Cucurbita pepo subsp. pepo] | [more] |
Match Name | E-value | Identity | Description | |
AT5G14920.1 | 2.3e-29 | 57.67 | Gibberellin-regulated family protein | [more] |
AT4G15160.1 | 7.4e-04 | 56.88 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil... | [more] |