Lcy09g018420 (gene) Sponge gourd (P93075) v1

Overview
NameLcy09g018420
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionReverse transcriptase domain-containing protein
LocationChr09: 40686734 .. 40687648 (+)
RNA-Seq ExpressionLcy09g018420
SyntenyLcy09g018420
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAACTTGACAAAGCTGAAACTGAGCTTGAAAGACTGCTAGAGGAAAAAGAGATATATTGGAAGTTCAGATCTAGGGAAGATTGGCTAAAATGGGGAGACCGTAACAGGAAATGGTTCCATTCCAAGGCAAGCGCGAGGAAAAAACAGAACATCATTGAAGGGATGTACAACAAAGCAAGAGTTTGGATTACTAATGAGGAGGAGATGGGAAATGAAGCCACTGACCACTTTTCTAACTTATTCTCAACGACTTCTCCCAACCAGGAAGCGATAAGGAATACGGTTGAAGGAATCCATTCGAAAATCTCGGAAACCCAAAGTAGATTCCTCAATGCTCTTTTCACTAAAGGGGAGATTGAAGTAGCTCTAAAAGGGATGAATCCTAGCAAAGCTCCAGGGGAAGATGGGGCCCATGCCCTTTTCTACCAATCCTATTGGGACATTGTGGGAACAAGGGTCACTTAAGTATGACTGGAAGTTCTGAACGAGGGTAAGGATGTAGGTCCACTGAACAGAACCAGAATTGTCCTTATCCCCAAAAAGAAGAAGCCTACAAGACTTGGGGAGTTTAGACCGATAAGTTTGTGCAATGTGATTTACAAAATCATTGCGAAAACTTTGGCCAATAGAATGAAGAGAGTTCTTGGAGATATCATATCCCCAATGCAAGCAGCCTTTGTCCCCAGTAGACTGATATCCGATAATGTGGTGGTGGGGTATGAATGCATTCACACTATAAACTGCAGGAAGAGTGGGAGAGTAAGGTTGGCAGCACAGAAGCTCGACATGAGTAAGGCATACGACAGGGTCGAGTGGACGTTTATCAGGCAGATGATGGAAGTTATGGGATTCCCTTCGATTTGGATAGAAAGGGTGATGAATTGTGTGGAGTCTGCAGCTACTCTGTGTTAA

mRNA sequence

ATGAAACTTGACAAAGCTGAAACTGAGCTTGAAAGACTGCTAGAGGAAAAAGAGATATATTGGAAGTTCAGATCTAGGGAAGATTGGCTAAAATGGGGAGACCGTAACAGGAAATGGTTCCATTCCAAGGCAAGCGCGAGGAAAAAACAGAACATCATTGAAGGGATGTACAACAAAGCAAGAGTTTGGATTACTAATGAGGAGGAGATGGGAAATGAAGCCACTGACCACTTTTCTAACTTATTCTCAACGACTTCTCCCAACCAGGAAGCGATAAGGAATACGGTTGAAGGAATCCATTCGAAAATCTCGGAAACCCAAAGTAGATTCCTCAATGCTCTTTTCACTAAAGGGGAGATTGAAGTAGCTCTAAAAGGGATGAATCCTAGCAAAGCTCCAGGGGAAGATGGGGCCCATGCCCTTTTCTACCAATCCTATTGGGACATTGTGGGAACAAGGGATGTAGGTCCACTGAACAGAACCAGAATTGTCCTTATCCCCAAAAAGAAGAAGCCTACAAGACTTGGGGAGTTTAGACCGATAAGTTTGTGCAATGTGATTTACAAAATCATTGCGAAAACTTTGGCCAATAGAATGAAGAGAGTTCTTGGAGATATCATATCCCCAATGCAAGCAGCCTTTGTCCCCAGTAGACTGATATCCGATAATGTGGTGGTGGGGTATGAATGCATTCACACTATAAACTGCAGGAAGAGTGGGAGAGTAAGGTTGGCAGCACAGAAGCTCGACATGAGTAAGGCATACGACAGGGTCGAGTGGACGTTTATCAGGCAGATGATGGAAGTTATGGGATTCCCTTCGATTTGGATAGAAAGGGTGATGAATTGTGTGGAGTCTGCAGCTACTCTGTGTTAA

Coding sequence (CDS)

ATGAAACTTGACAAAGCTGAAACTGAGCTTGAAAGACTGCTAGAGGAAAAAGAGATATATTGGAAGTTCAGATCTAGGGAAGATTGGCTAAAATGGGGAGACCGTAACAGGAAATGGTTCCATTCCAAGGCAAGCGCGAGGAAAAAACAGAACATCATTGAAGGGATGTACAACAAAGCAAGAGTTTGGATTACTAATGAGGAGGAGATGGGAAATGAAGCCACTGACCACTTTTCTAACTTATTCTCAACGACTTCTCCCAACCAGGAAGCGATAAGGAATACGGTTGAAGGAATCCATTCGAAAATCTCGGAAACCCAAAGTAGATTCCTCAATGCTCTTTTCACTAAAGGGGAGATTGAAGTAGCTCTAAAAGGGATGAATCCTAGCAAAGCTCCAGGGGAAGATGGGGCCCATGCCCTTTTCTACCAATCCTATTGGGACATTGTGGGAACAAGGGATGTAGGTCCACTGAACAGAACCAGAATTGTCCTTATCCCCAAAAAGAAGAAGCCTACAAGACTTGGGGAGTTTAGACCGATAAGTTTGTGCAATGTGATTTACAAAATCATTGCGAAAACTTTGGCCAATAGAATGAAGAGAGTTCTTGGAGATATCATATCCCCAATGCAAGCAGCCTTTGTCCCCAGTAGACTGATATCCGATAATGTGGTGGTGGGGTATGAATGCATTCACACTATAAACTGCAGGAAGAGTGGGAGAGTAAGGTTGGCAGCACAGAAGCTCGACATGAGTAAGGCATACGACAGGGTCGAGTGGACGTTTATCAGGCAGATGATGGAAGTTATGGGATTCCCTTCGATTTGGATAGAAAGGGTGATGAATTGTGTGGAGTCTGCAGCTACTCTGTGTTAA

Protein sequence

MKLDKAETELERLLEEKEIYWKFRSREDWLKWGDRNRKWFHSKASARKKQNIIEGMYNKARVWITNEEEMGNEATDHFSNLFSTTSPNQEAIRNTVEGIHSKISETQSRFLNALFTKGEIEVALKGMNPSKAPGEDGAHALFYQSYWDIVGTRDVGPLNRTRIVLIPKKKKPTRLGEFRPISLCNVIYKIIAKTLANRMKRVLGDIISPMQAAFVPSRLISDNVVVGYECIHTINCRKSGRVRLAAQKLDMSKAYDRVEWTFIRQMMEVMGFPSIWIERVMNCVESAATLC
Homology
BLAST of Lcy09g018420 vs. ExPASy Swiss-Prot
Match: P14381 (Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.3e-21
Identity = 85/296 (28.72%), Postives = 145/296 (48.99%), Query Frame = 0

Query: 9   ELERLLEEKEIYWKF-RSREDWLKWGDRNRKWFHSKASARKKQNIIEGMYNKARVWITNE 68
           E  R +E+++    F RSR   L   DR  ++F++    +  +  I  ++ +    + + 
Sbjct: 343 EALRNMEQRQARGAFVRSRMQLLCDMDRGSRFFYALEKKKGNRKQITCLFAEDGTPLEDP 402

Query: 69  EEMGNEATDHFSNLFSTTSPNQEAIRNTVEGIHSKISETQSRFLNALFTKGEIEVALKGM 128
           E + + A   + NLFS    + +A     +G+   +SE +   L    T  E+  AL+ M
Sbjct: 403 EAIRDRARSFYQNLFSPDPISPDACEELWDGL-PVVSERRKERLETPITLDELSQALRLM 462

Query: 129 NPSKAPGEDGAHALFYQSYWDIVG-----------TRDVGPLNRTRIV--LIPKKKKPTR 188
             +K+PG DG    F+Q +WD +G            +   PL+  R V  L+PKK     
Sbjct: 463 PHNKSPGLDGLTIEFFQFFWDTLGPDFHRVLTEAFKKGELPLSCRRAVLSLLPKKGDLRL 522

Query: 189 LGEFRPISLCNVIYKIIAKTLANRMKRVLGDIISPMQAAFVPSRLISDNVVVGYECIHTI 248
           +  +RP+SL +  YKI+AK ++ R+K VL ++I P Q+  VP R I DNV +  + +H  
Sbjct: 523 IKNWRPVSLLSTDYKIVAKAISLRLKSVLAEVIHPDQSYTVPGRTIFDNVFLIRDLLHF- 582

Query: 249 NCRKSGRVRLAAQKLDMSKAYDRVEWTFIRQMMEVMGFPSIWIERVMNCVESAATL 291
             R++G + LA   LD  KA+DRV+  ++   ++   F   ++  +     SA  L
Sbjct: 583 -ARRTG-LSLAFLSLDQEKAFDRVDHQYLIGTLQAYSFGPQFVGYLKTMYASAECL 634

BLAST of Lcy09g018420 vs. ExPASy Swiss-Prot
Match: P11369 (LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE=1 SV=2)

HSP 1 Score: 95.9 bits (237), Expect = 8.0e-19
Identity = 74/274 (27.01%), Postives = 124/274 (45.26%), Query Frame = 0

Query: 34  DRNRKWFHSK-----------ASARKKQNIIEGMYNKARVWITNEEEMGNEATDHFSNLF 93
           ++ R WF  K               + + +I  + N+     T+ EE+ N     +  L+
Sbjct: 367 NQTRSWFFEKINKIDKPLARLTKGHRDKILINKIRNEKGDITTDPEEIQNTIRSFYKRLY 426

Query: 94  STTSPNQEAIRNTVEGIH-SKISETQSRFLNALFTKGEIEVALKGMNPSKAPGEDGAHAL 153
           ST   N + +   ++     K+++ Q   LN+  +  EIE  +  +   K+PG DG  A 
Sbjct: 427 STKLENLDEMDKFLDRYQVPKLNQDQVDHLNSPISPKEIEAVINSLPTKKSPGPDGFSAE 486

Query: 154 FYQSY--------------WDIVGTRDVGPLNRTRIVLIPK-KKKPTRLGEFRPISLCNV 213
           FYQ++               ++ GT          I LIPK +K PT++  FRPISL N+
Sbjct: 487 FYQTFKEDLIPILHKLFHKIEVEGTLP-NSFYEATITLIPKPQKDPTKIENFRPISLMNI 546

Query: 214 IYKIIAKTLANRMKRVLGDIISPMQAAFVPSRLISDNVVVGYECIHTINCRKSGRVRLAA 273
             KI+ K LANR++  +  II P Q  F+P      N+      IH IN  K     + +
Sbjct: 547 DAKILNKILANRIQEHIKAIIHPDQVGFIPGMQGWFNIRKSINVIHYINKLKDKNHMIIS 606

Query: 274 QKLDMSKAYDRVEWTFIRQMMEVMGFPSIWIERV 281
             LD  KA+D+++  F+ +++E  G    ++  +
Sbjct: 607 --LDAEKAFDKIQHPFMIKVLERSGIQGPYLNMI 637

BLAST of Lcy09g018420 vs. ExPASy Swiss-Prot
Match: P08548 (LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 9.2e-15
Identity = 69/273 (25.27%), Postives = 124/273 (45.42%), Query Frame = 0

Query: 34  DRNRKWFHSKAS---------ARKK--QNIIEGMYNKARVWITNEEEMGNEATDHFSNLF 93
           ++++ WF  K +          RKK  +++I  + N      T+  E+     +++  L+
Sbjct: 359 NKSKSWFFEKINKIDKPLANLTRKKRVKSLISSIRNGNDEITTDPSEIQKILNEYYKKLY 418

Query: 94  STTSPNQEAIRNTVEGIH-SKISETQSRFLNALFTKGEIEVALKGMNPSKAPGEDGAHAL 153
           S    N + I   +E  H  ++S+ +   LN   +  EI   ++ +   K+PG DG  + 
Sbjct: 419 SHKYENLKEIDQYLEACHLPRLSQKEVEMLNRPISSSEIASTIQNLPKKKSPGPDGFTSE 478

Query: 154 FYQSYWD---------IVGTRDVGPLNRT----RIVLIPKK-KKPTRLGEFRPISLCNVI 213
           FYQ++ +                G L  T     I LIPK  K PTR   +RPISL N+ 
Sbjct: 479 FYQTFKEELVPILLNLFQNIEKEGILPNTFYEANITLIPKPGKDPTRKENYRPISLMNID 538

Query: 214 YKIIAKTLANRMKRVLGDIISPMQAAFVPSRLISDNVVVGYECIHTINCRKSGRVRLAAQ 273
            KI+ K L NR+++ +  II   Q  F+P      N+      I  IN  K+    + + 
Sbjct: 539 AKILNKILTNRIQQHIKKIIHHDQVGFIPGSQGWFNIRKSINVIQHINKLKNKDHMILS- 598

Query: 274 KLDMSKAYDRVEWTFIRQMMEVMGFPSIWIERV 281
            +D  KA+D ++  F+ + ++ +G    +++ +
Sbjct: 599 -IDAEKAFDNIQHPFMIRTLKKIGIEGTFLKLI 629

BLAST of Lcy09g018420 vs. ExPASy Swiss-Prot
Match: O00370 (LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 4.3e-12
Identity = 70/318 (22.01%), Postives = 140/318 (44.03%), Query Frame = 0

Query: 2   KLDKAETELERLLEEKEIYWKFRSRED---------------WLKWGDRNRKWFHSKAS- 61
           K+D   ++L+ L ++++ + K   R++                L+  + +R WF  + + 
Sbjct: 313 KIDTLTSQLKELEKQEQTHSKASRRQEITKIRAELKEIETQKTLQKINESRSWFFERINK 372

Query: 62  ----------ARKKQNIIEGMYNKARVWITNEEEMGNEATDHFSNLFSTTSPNQEAIRNT 121
                      ++++N I+ + N      T+  E+     +++ +L++    N E +   
Sbjct: 373 IDRPLARLIKKKREKNQIDTIKNDKGDITTDPTEIQTTIREYYKHLYANKLENLEEMDTF 432

Query: 122 VEGIH-SKISETQSRFLNALFTKGEIEVALKGMNPSKAPGEDGAHALFYQSY-------- 181
           ++     ++++ +   LN   T  EI   +  +   K+PG DG  A FYQ Y        
Sbjct: 433 LDTYTLPRLNQEEVESLNRPITGSEIVAIINSLPTKKSPGPDGFTAEFYQRYKEELVPFL 492

Query: 182 ---WDIVGTRDVGP--LNRTRIVLIPKKKKPTRLGE-FRPISLCNVIYKIIAKTLANRMK 241
              +  +    + P       I+LIPK  + T   E FRPISL N+  KI+ K LANR++
Sbjct: 493 LKLFQSIEKEGILPNSFYEASIILIPKPGRDTTKKENFRPISLMNIDAKILNKILANRIQ 552

Query: 242 RVLGDIISPMQAAFVPSRLISDNVVVGYECIHTINCRKSGRVRLAAQKLDMSKAYDRVEW 279
           + +  +I   Q  F+P      N+      I  IN  K     + +  +D  KA+D+++ 
Sbjct: 553 QHIKKLIHHDQVGFIPGMQGWFNIRKSINVIQHINRAKDKNHVIIS--IDAEKAFDKIQQ 612

BLAST of Lcy09g018420 vs. ExPASy TrEMBL
Match: A0A2N9I335 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS48349 PE=4 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 4.4e-68
Identity = 134/300 (44.67%), Postives = 197/300 (65.67%), Query Frame = 0

Query: 2   KLDKAETELERLLEEKEIYWKFRSREDWLKWGDRNRKWFHSKASARKKQNIIEGMYNKAR 61
           ++ + + EL  LLE +EIYW+ RSR  W++ GD+N K+FH+  + R++ N+I+G+ +   
Sbjct: 219 EIAEVQNELNTLLENEEIYWRQRSRVSWMREGDKNTKFFHAHCNHRREINLIKGLRDNEG 278

Query: 62  VWITNEEEMGNEATDHFSNLFSTTSPNQEAIRNTVEGIHSKISETQSRFLNALFTKGEIE 121
           V  T++ +M N A D+F ++FS+++P  E I + ++G+   ++E  +  L   F   E+ 
Sbjct: 279 VLQTDKIKMANIAVDYFQSIFSSSNPGDETINSCLDGLERVVTEEMNNMLLEDFNSEEVS 338

Query: 122 VALKGMNPSKAPGEDGAHALFYQSYWDIVGTR-------------DVGPLNRTRIVLIPK 181
            ALK M P+KAPG DG  A+FYQ+YWDIVG                V  +N T I LIPK
Sbjct: 339 QALKQMYPTKAPGPDGMSAVFYQTYWDIVGPEVTQAILSILHSGYMVNKINYTHIALIPK 398

Query: 182 KKKPTRLGEFRPISLCNVIYKIIAKTLANRMKRVLGDIISPMQAAFVPSRLISDNVVVGY 241
            K P R+ +FRPISLCNVIYKI++K LANR+K+VL  +IS  Q+AFVP RLI+DNV+V +
Sbjct: 399 VKNPERITDFRPISLCNVIYKIVSKILANRLKKVLPYVISESQSAFVPGRLITDNVLVAF 458

Query: 242 ECIHTINCRKSGRVRLAAQKLDMSKAYDRVEWTFIRQMMEVMGFPSIWIERVMNCVESAA 289
           E +H+++ ++ GR    A KLDMSKAYDRVEW F+  +M  +GF   WI  +M C++S +
Sbjct: 459 EVMHSMSLKRIGRRGQMALKLDMSKAYDRVEWVFVEAIMRRLGFAEDWINLIMMCLKSVS 518

BLAST of Lcy09g018420 vs. ExPASy TrEMBL
Match: A0A2N9GLL3 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS31219 PE=4 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 7.4e-68
Identity = 137/295 (46.44%), Postives = 191/295 (64.75%), Query Frame = 0

Query: 7    ETELERLLEEKEIYWKFRSREDWLKWGDRNRKWFHSKASARKKQNIIEGMYNKARVWITN 66
            +TE+   L  +EIYW+ R++  WL+ GD+N K+FH +AS RK++N+I G+++ +  W   
Sbjct: 736  KTEMNACLLREEIYWRQRAKALWLEAGDKNTKYFHQRASQRKRKNLIRGLFDSSGHWQET 795

Query: 67   EEEMGNEATDHFSNLFSTTSPNQEAIRNTVEGIHSKISETQSRFLNALFTKGEIEVALKG 126
            + E+ N A  +F+ LFST  P+Q  I +T++ I   +S   +  L   FT  E++ AL  
Sbjct: 796  DSEVANIAEKYFTELFSTDHPSQ--IHHTIDAIEPMVSPNHNNTLLQPFTAIEVKNALFQ 855

Query: 127  MNPSKAPGEDGAHALFYQSYWDIVGT-------------RDVGPLNRTRIVLIPKKKKPT 186
            M+PSKAPG DG    FYQ YW IVG              + +  +N T + LIPK K P 
Sbjct: 856  MHPSKAPGPDGMSCFFYQRYWHIVGNEVTTAVLSILNSGQMLSKINFTHVTLIPKVKSPQ 915

Query: 187  RLGEFRPISLCNVIYKIIAKTLANRMKRVLGDIISPMQAAFVPSRLISDNVVVGYECIHT 246
             +GEFRPISLCNVIYK+I+K LANR++ VL  +IS  Q+AF+PSRLI+DN+VV YE +HT
Sbjct: 916  YIGEFRPISLCNVIYKVISKVLANRLQGVLPMVISDTQSAFLPSRLITDNIVVAYELMHT 975

Query: 247  INCRKSGRVRLAAQKLDMSKAYDRVEWTFIRQMMEVMGFPSIWIERVMNCVESAA 289
            +  ++SG+V   A KLDMSKAYDRVEW F+ Q M  +GF   W+  VM CV +A+
Sbjct: 976  MKMKRSGKVGYMAMKLDMSKAYDRVEWEFLEQTMLKLGFADRWVNLVMACVRTAS 1028

BLAST of Lcy09g018420 vs. ExPASy TrEMBL
Match: A0A2N9GQ35 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS29226 PE=4 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 7.4e-68
Identity = 127/300 (42.33%), Postives = 201/300 (67.00%), Query Frame = 0

Query: 2   KLDKAETELERLLEEKEIYWKFRSREDWLKWGDRNRKWFHSKASARKKQNIIEGMYNKAR 61
           +L + +TEL  LLE++EI+W+ RSR  W+  GD+N K+FH+  + R++ N+I G+Y++  
Sbjct: 165 RLVELQTELNGLLEKEEIFWRQRSRISWMSEGDKNTKFFHASCTQRRQTNLIRGLYDQDN 224

Query: 62  VWITNEEEMGNEATDHFSNLFSTTSPNQEAIRNTVEGIHSKISETQSRFLNALFTKGEIE 121
           +W T + ++ + A  +F N+F+++ P  + I + +EG+ S ++   +  L A FT+ E+ 
Sbjct: 225 IWQTEKNKIADIAVTYFQNIFTSSQPGVDTINSCLEGMVSVVTADMNANLLAQFTEEEVF 284

Query: 122 VALKGMNPSKAPGEDGAHALFYQSYWDIVGT-------------RDVGPLNRTRIVLIPK 181
            AL+ M P+KAPG DG  A+FYQ+YW++VG                +  +N T I L+PK
Sbjct: 285 AALQQMYPTKAPGPDGMSAIFYQTYWEVVGPEVTQAILSIIHSGHMLSKINYTHIALVPK 344

Query: 182 KKKPTRLGEFRPISLCNVIYKIIAKTLANRMKRVLGDIISPMQAAFVPSRLISDNVVVGY 241
              P ++ +FRPI+LCNVIYKII+K LANR+K++L  I+S  Q+AFVP RLI+DNV+V +
Sbjct: 345 ITSPEKITDFRPIALCNVIYKIISKVLANRLKKILPQIVSESQSAFVPGRLITDNVLVAF 404

Query: 242 ECIHTINCRKSGRVRLAAQKLDMSKAYDRVEWTFIRQMMEVMGFPSIWIERVMNCVESAA 289
           E +H+++ +++GR    A KLDMSKAYDRVEW+F+  +M  +GF   WI  +M C++S +
Sbjct: 405 EVMHSMSLKRNGRKGQMALKLDMSKAYDRVEWSFLEAIMRRLGFAEEWIHLIMMCIKSVS 464

BLAST of Lcy09g018420 vs. ExPASy TrEMBL
Match: A0A2N9GPZ7 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS29430 PE=4 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 9.7e-68
Identity = 131/295 (44.41%), Postives = 195/295 (66.10%), Query Frame = 0

Query: 7   ETELERLLEEKEIYWKFRSREDWLKWGDRNRKWFHSKASARKKQNIIEGMYNKARVWITN 66
           + +L  LLE++EI+W+ RSR  W+  GD+N K+FH++ + R++ N I G+ ++  VW T 
Sbjct: 195 QDDLNGLLEKEEIFWRQRSRVAWMSEGDKNTKFFHAQCNERRRTNHISGLRDRDGVWQTE 254

Query: 67  EEEMGNEATDHFSNLFSTTSPNQEAIRNTVEGIHSKISETQSRFLNALFTKGEIEVALKG 126
           + ++   A D+F  +F++++P+ E+I   ++G+ S ++   +  L A FTK E+ +ALK 
Sbjct: 255 KTKIAEIAVDYFQGIFTSSNPSAESITTVLQGMESVVTNAMNDQLQAEFTKDEVSLALKQ 314

Query: 127 MNPSKAPGEDGAHALFYQSYWDIVGTR-------------DVGPLNRTRIVLIPKKKKPT 186
           M P+KAPG DG  A+FYQ+YWDIVG                +  +N T I LIPK K P 
Sbjct: 315 MYPTKAPGPDGMSAIFYQTYWDIVGPEVTQAILSILHSGYMLRKINYTHIALIPKVKNPE 374

Query: 187 RLGEFRPISLCNVIYKIIAKTLANRMKRVLGDIISPMQAAFVPSRLISDNVVVGYECIHT 246
            + +FRPISLCNVIYKI++K LANR+K+VL  +IS  Q+AFVP RLI+DNV+V +E +H+
Sbjct: 375 NITDFRPISLCNVIYKIVSKVLANRLKKVLPFVISEAQSAFVPGRLITDNVLVAFEVMHS 434

Query: 247 INCRKSGRVRLAAQKLDMSKAYDRVEWTFIRQMMEVMGFPSIWIERVMNCVESAA 289
           ++ ++ G+    A KLDMSKAYDRVEW F+  +M  MGF   WI  +M C+ S +
Sbjct: 435 MSLKRKGKKGQMALKLDMSKAYDRVEWVFLESIMRGMGFAKEWIRLMMMCLRSVS 489

BLAST of Lcy09g018420 vs. ExPASy TrEMBL
Match: A0A2N9IPS8 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS55418 PE=4 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 9.7e-68
Identity = 131/295 (44.41%), Postives = 195/295 (66.10%), Query Frame = 0

Query: 7    ETELERLLEEKEIYWKFRSREDWLKWGDRNRKWFHSKASARKKQNIIEGMYNKARVWITN 66
            + +L  LLE++EI+W+ RSR  W+  GD+N K+FH++ + R++ N I G+ ++  VW T 
Sbjct: 770  QDDLNGLLEKEEIFWRQRSRVAWMSEGDKNTKFFHAQCNERRRTNHISGLRDRDGVWQTE 829

Query: 67   EEEMGNEATDHFSNLFSTTSPNQEAIRNTVEGIHSKISETQSRFLNALFTKGEIEVALKG 126
            + ++   A D+F  +F++++P+ E+I   ++G+ S ++   +  L A FTK E+ +ALK 
Sbjct: 830  KTKIAEIAVDYFQGIFTSSNPSAESITTVLQGMESVVTNAMNDQLQAEFTKDEVSLALKQ 889

Query: 127  MNPSKAPGEDGAHALFYQSYWDIVGTR-------------DVGPLNRTRIVLIPKKKKPT 186
            M P+KAPG DG  A+FYQ+YWDIVG                +  +N T I LIPK K P 
Sbjct: 890  MYPTKAPGPDGMSAIFYQTYWDIVGPEVTQAILSILHSGYMLRKINYTHIALIPKVKNPE 949

Query: 187  RLGEFRPISLCNVIYKIIAKTLANRMKRVLGDIISPMQAAFVPSRLISDNVVVGYECIHT 246
             + +FRPISLCNVIYKI++K LANR+K+VL  +IS  Q+AFVP RLI+DNV+V +E +H+
Sbjct: 950  NITDFRPISLCNVIYKIVSKVLANRLKKVLPFVISEAQSAFVPGRLITDNVLVAFEVMHS 1009

Query: 247  INCRKSGRVRLAAQKLDMSKAYDRVEWTFIRQMMEVMGFPSIWIERVMNCVESAA 289
            ++ ++ G+    A KLDMSKAYDRVEW F+  +M  MGF   WI  +M C+ S +
Sbjct: 1010 MSLKRKGKKGQMALKLDMSKAYDRVEWVFLESIMRGMGFAKEWIRLMMMCLRSVS 1064

BLAST of Lcy09g018420 vs. NCBI nr
Match: XP_030923330.1 (uncharacterized protein LOC115950239 [Quercus lobata])

HSP 1 Score: 291.6 bits (745), Expect = 7.6e-75
Identity = 148/289 (51.21%), Postives = 199/289 (68.86%), Query Frame = 0

Query: 9    ELERLLEEKEIYWKFRSREDWLKWGDRNRKWFHSKASARKKQNIIEGMYNKARVWITNEE 68
            +++ LL+++EIYW  RSR +WL+ GDRN K+FH+KAS R+++N I G+ N    W+ N E
Sbjct: 725  KMDDLLQKQEIYWAQRSRINWLRHGDRNTKFFHAKASQRRRKNFIRGIRNSQGQWVENLE 784

Query: 69   EMGNEATDHFSNLFSTTSPNQEAIRNTVEGIHSKISETQSRFLNALFTKGEIEVALKGMN 128
            E+G  A D+F NLF   + +Q  +   ++ + +K++E    FL+  FT  E++ AL  M 
Sbjct: 785  EVGQVAADYFDNLFQAGAGDQ--MEECLDAVDTKVTEDMREFLSNQFTAEEVQAALFQMG 844

Query: 129  PSKAPGEDGAHALFYQSYWDIVGTRDVG-------------PLNRTRIVLIPKKKKPTRL 188
            P+KAPG DG +ALFYQ +W IVG   V               +N T IVLIPK + P R+
Sbjct: 845  PTKAPGPDGMNALFYQKFWHIVGDSVVSAVLDFLNNGNMLPEINHTNIVLIPKVQNPERM 904

Query: 189  GEFRPISLCNVIYKIIAKTLANRMKRVLGDIISPMQAAFVPSRLISDNVVVGYECIHTIN 248
             EFRPISLCNVIYKII+K LANR+K+VL  IIS  Q+AFVP RLI+DNV+V YE +HT++
Sbjct: 905  SEFRPISLCNVIYKIISKVLANRLKQVLPQIISSTQSAFVPGRLITDNVLVAYETLHTMH 964

Query: 249  CRKSGRVRLAAQKLDMSKAYDRVEWTFIRQMMEVMGFPSIWIERVMNCV 285
             RK G+    A KLD+SKAYDRVEW F++ +ME MGFP+ WIERVM+CV
Sbjct: 965  ARKKGKKGDVALKLDISKAYDRVEWHFLQSIMEKMGFPAGWIERVMSCV 1011

BLAST of Lcy09g018420 vs. NCBI nr
Match: XP_024038343.1 (uncharacterized protein LOC112097373 [Citrus clementina])

HSP 1 Score: 276.6 bits (706), Expect = 2.5e-70
Identity = 141/299 (47.16%), Postives = 196/299 (65.55%), Query Frame = 0

Query: 2   KLDKAETELERLLEEKEIYWKFRSREDWLKWGDRNRKWFHSKASARKKQNIIEGMYNKAR 61
           K+ + E +++ +L + EIYWK RSR DWLK GD+N K+FH KAS+RKK+N I G+ N A 
Sbjct: 285 KIKEVERQIQYMLADDEIYWKQRSRADWLKGGDKNTKFFHHKASSRKKKNRIWGIENAAG 344

Query: 62  VWITNEEEMGNEATDHFSNLFSTTSPNQEAIRNTVEGIHSKISETQSRFLNALFTKGEIE 121
            WI N E +  E   +F+NLF+T+ PNQ+ I   + GI  ++S   +  L   FT  E+ 
Sbjct: 345 NWIENAEGVEFEFNKYFTNLFTTSKPNQDQIAAALSGISRRVSTEMNESLEMPFTPEEVV 404

Query: 122 VALKGMNPSKAPGEDGAHALFYQSYWDIV-------------GTRDVGPLNRTRIVLIPK 181
            AL  M P+KAPG DG  A+F+Q +W  V                DV P N T IVLI K
Sbjct: 405 EALTQMCPTKAPGPDGLPAVFFQKHWQRVKQGVLSTCLHILNKQGDVAPFNHTYIVLISK 464

Query: 182 KKKPTRLGEFRPISLCNVIYKIIAKTLANRMKRVLGDIISPMQAAFVPSRLISDNVVVGY 241
           K KP ++ +FRPISLCNVIY+I+AK +ANR+K VL ++ISPMQ+AF+P+ LI+DN++VGY
Sbjct: 465 KGKPRKVTDFRPISLCNVIYRIVAKAIANRLKNVLPNLISPMQSAFIPNWLITDNIIVGY 524

Query: 242 ECIHTINCRKSGRVRLAAQKLDMSKAYDRVEWTFIRQMMEVMGFPSIWIERVMNCVESA 288
           EC+H I   K  +  L A KLD+SKAYD++EW F+ Q M+ +GF   W+  +M+ + S+
Sbjct: 525 ECLHKIRHCKGRKNGLVALKLDVSKAYDKLEWVFLEQTMKSLGFSQNWVSLIMSLLLSS 583

BLAST of Lcy09g018420 vs. NCBI nr
Match: XP_030931246.1 (uncharacterized protein LOC115957168 [Quercus lobata])

HSP 1 Score: 275.8 bits (704), Expect = 4.3e-70
Identity = 139/289 (48.10%), Postives = 198/289 (68.51%), Query Frame = 0

Query: 9   ELERLLEEKEIYWKFRSREDWLKWGDRNRKWFHSKASARKKQNIIEGMYNKARVWITNEE 68
           EL+ LL ++EIYW   SR  WLK GD+N K+FHSKAS R+++N+I+G+  +   W+ +  
Sbjct: 281 ELDDLLMKQEIYWAQCSRISWLKHGDKNTKFFHSKASNRRRRNLIQGIRTQDNRWVEDIS 340

Query: 69  EMGNEATDHFSNLFSTTSPNQEAIRNTVEGIHSKISETQSRFLNALFTKGEIEVALKGMN 128
           ++G  AT +F  +F  T+   + +   +  +  KI+E    FL   ++  EI+ AL  M 
Sbjct: 341 DIGQVATSYFERMF--TAGTCDRMEECLNAVQQKITEDMKEFLTRDYSVDEIKAALFQMG 400

Query: 129 PSKAPGEDGAHALFYQSYWDIVG------------TRDVGP-LNRTRIVLIPKKKKPTRL 188
           P+KAPG DG +ALFYQ +W+IVG            + ++ P +N T I+LIPK K P ++
Sbjct: 401 PTKAPGPDGMNALFYQKFWNIVGDDVVVAVLDFLNSGNMDPAVNYTHIILIPKIKSPEKM 460

Query: 189 GEFRPISLCNVIYKIIAKTLANRMKRVLGDIISPMQAAFVPSRLISDNVVVGYECIHTIN 248
            ++RPISLCNVIYKII+K LAN++K++L  IIS  Q+AFVPSRLI+DN++V YEC+H ++
Sbjct: 461 SDYRPISLCNVIYKIISKVLANKLKQILPQIISSTQSAFVPSRLITDNILVAYECLHAMH 520

Query: 249 CRKSGRVRLAAQKLDMSKAYDRVEWTFIRQMMEVMGFPSIWIERVMNCV 285
            RK G+    A KLD+SKAYDRVEW F++ +ME MGFP IWI+RVM+CV
Sbjct: 521 FRKKGKKGSIALKLDISKAYDRVEWAFLKGIMEKMGFPLIWIDRVMSCV 567

BLAST of Lcy09g018420 vs. NCBI nr
Match: XP_023908235.1 (uncharacterized protein LOC112019924 [Quercus suber])

HSP 1 Score: 274.6 bits (701), Expect = 9.6e-70
Identity = 140/293 (47.78%), Postives = 196/293 (66.89%), Query Frame = 0

Query: 9   ELERLLEEKEIYWKFRSREDWLKWGDRNRKWFHSKASARKKQNIIEGMYNKARVWITNEE 68
           +L+ LL ++EIYW  RSR  WLK GD+N K+FHSKAS R+++N I+G+ +    W+   E
Sbjct: 622 QLDDLLLKQEIYWAQRSRIPWLKHGDKNTKYFHSKASQRRRRNFIKGIRSAQGNWVEEME 681

Query: 69  EMGNEATDHFSNLFSTTSPNQEAIRNTVEGIHSKISETQSRFLNALFTKGEIEVALKGMN 128
           E+ N AT +F NLF   + N + +   +  +  K++      L++ F   E+++AL  M 
Sbjct: 682 EIANVATGYFDNLF--CAGNCDQMEECLNAVPRKVTPEMHDTLSSEFNAEEVKLALFQMG 741

Query: 129 PSKAPGEDGAHALFYQSYWDIVGTRDVG-------------PLNRTRIVLIPKKKKPTRL 188
           P+KAPG DG +ALFYQ +W +VG   V               +N T IVLIPK K P ++
Sbjct: 742 PTKAPGPDGMNALFYQKFWHVVGDTVVDAVLDFLNNGHMAPDINHTYIVLIPKVKNPEKM 801

Query: 189 GEFRPISLCNVIYKIIAKTLANRMKRVLGDIISPMQAAFVPSRLISDNVVVGYECIHTIN 248
            +FRPISLCNVIYKII+K L NR+K+VL +IISP Q+AFVP RLI+DNV++ YE +HT++
Sbjct: 802 SDFRPISLCNVIYKIISKVLVNRLKQVLPNIISPTQSAFVPGRLITDNVLLAYETLHTMH 861

Query: 249 CRKSGRVRLAAQKLDMSKAYDRVEWTFIRQMMEVMGFPSIWIERVMNCVESAA 289
            RK G+    A KLD+SKAYDRVEW F++ +M+ +GFP  WIERVM+CV + +
Sbjct: 862 SRKKGKKGYMALKLDVSKAYDRVEWPFLQGIMQRLGFPETWIERVMSCVTTTS 912

BLAST of Lcy09g018420 vs. NCBI nr
Match: XP_006491472.1 (uncharacterized protein LOC102626455 [Citrus sinensis])

HSP 1 Score: 271.9 bits (694), Expect = 6.2e-69
Identity = 136/296 (45.95%), Postives = 193/296 (65.20%), Query Frame = 0

Query: 2   KLDKAETELERLLEEKEIYWKFRSREDWLKWGDRNRKWFHSKASARKKQNIIEGMYNKAR 61
           ++ K E ++  +L ++E+YWK RSR DWLK GD+N K+FHSKASAR+++N I G+ +   
Sbjct: 410 EIRKLEDQISNMLVDEEVYWKQRSRADWLKEGDKNTKFFHSKASARRRKNKIWGVEDDQG 469

Query: 62  VWITNEEEMGNEATDHFSNLFSTTSPNQEAIRNTVEGIHSKISETQSRFLNALFTKGEIE 121
            W+ + E +  E    F  LF++++P+Q  I   ++G+  K+S+  +  L   FT  +I 
Sbjct: 470 NWVDDPEGIEGEFCGFFQQLFTSSNPSQTQISEALKGLLPKVSQEMNTHLEEPFTPEDIT 529

Query: 122 VALKGMNPSKAPGEDGAHALFYQSYWDIVG-------------TRDVGPLNRTRIVLIPK 181
            AL  M P+KAPG DG  A F+Q +W IVG                +  LN T I LIPK
Sbjct: 530 RALSEMCPTKAPGPDGLPAAFFQKHWQIVGEGLTKTCLHILNEQGTLDSLNHTFIALIPK 589

Query: 182 KKKPTRLGEFRPISLCNVIYKIIAKTLANRMKRVLGDIISPMQAAFVPSRLISDNVVVGY 241
            +KP ++ EFRPISLCNV+Y+I+AK +ANR+K +L  IISP Q+AF+P+RLI+DNV++GY
Sbjct: 590 VEKPRKVMEFRPISLCNVVYRIVAKAIANRLKPILNHIISPNQSAFIPNRLITDNVIIGY 649

Query: 242 ECIHTINCRKSGRVRLAAQKLDMSKAYDRVEWTFIRQMMEVMGFPSIWIERVMNCV 285
           EC+H I   K  R  L A KLD+SKAYDRVEW F+ Q M  +GF + WI  +M+C+
Sbjct: 650 ECLHKIRLSKGRRNGLVALKLDISKAYDRVEWNFLEQTMSNLGFSAKWISLIMSCI 705

BLAST of Lcy09g018420 vs. TAIR 10
Match: AT1G43760.1 (DNAse I-like superfamily protein )

HSP 1 Score: 75.5 bits (184), Expect = 8.0e-14
Identity = 54/190 (28.42%), Postives = 95/190 (50.00%), Query Frame = 0

Query: 18  EIYWKFRSREDWLKWGDRNRKWFHSKASARKKQNIIEGMYNKARVWITNEEEMGNEATDH 77
           E +++ +SR  WL+ GD N ++FH    A + +N+I+ +     V + N  ++      +
Sbjct: 432 ESFYRQKSRIKWLQDGDANTRFFHKVILANQAKNLIKFLRMDDDVRVENVTQVKEMIVAY 491

Query: 78  FSNLFSTTSP--NQEAIRNTVEGIHS-KISETQSRFLNALFTKGEIEVALKGMNPSKAPG 137
           +++L  + S     ++++  ++ IH  + ++T +  L+AL +  EI  A+  M  +KAPG
Sbjct: 492 YTHLLGSDSDILTPDSVQR-IKDIHPFRCNDTLASRLSALPSDKEITAAVFAMPRNKAPG 551

Query: 138 EDGAHALFYQSYWDIVGTRDVGPL-------------NRTRIVLIPKKKKPTRLGEFRPI 192
            D   A F+   W +V    +  +             N T I LIPK     +L  FRP+
Sbjct: 552 PDSFTAEFFWESWFVVKDSTIAAVKEFFRTGHLLKRFNATAITLIPKVTGVDQLSMFRPV 611

BLAST of Lcy09g018420 vs. TAIR 10
Match: AT4G20520.1 (RNA binding;RNA-directed DNA polymerases )

HSP 1 Score: 72.0 bits (175), Expect = 8.8e-13
Identity = 30/86 (34.88%), Postives = 52/86 (60.47%), Query Frame = 0

Query: 195 LANRMKRVLGDIISPMQAAFVPSRLISDNVVVGYECIHTINCRKSGRVRLAAQKLDMSKA 254
           +  R+K ++ ++I P QA+F+P R+ +DN+V   E +H++  RK G       KLD+ KA
Sbjct: 1   MVERLKPLMTNLIGPAQASFIPGRVSTDNIVFVQEAVHSMR-RKKGVKGWMLLKLDLEKA 60

Query: 255 YDRVEWTFIRQMMEVMGFPSIWIERV 281
           YDR+ W ++   +   GFP +W+  +
Sbjct: 61  YDRIRWDYLEDTLISAGFPEVWLPEI 85

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
P143811.3e-2128.72Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV... [more]
P113698.0e-1927.01LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE... [more]
P085489.2e-1525.27LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1[more]
O003704.3e-1222.01LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A2N9I3354.4e-6844.67Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... [more]
A0A2N9GLL37.4e-6846.44Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... [more]
A0A2N9GQ357.4e-6842.33Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... [more]
A0A2N9GPZ79.7e-6844.41Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... [more]
A0A2N9IPS89.7e-6844.41Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... [more]
Match NameE-valueIdentityDescription
XP_030923330.17.6e-7551.21uncharacterized protein LOC115950239 [Quercus lobata][more]
XP_024038343.12.5e-7047.16uncharacterized protein LOC112097373 [Citrus clementina][more]
XP_030931246.14.3e-7048.10uncharacterized protein LOC115957168 [Quercus lobata][more]
XP_023908235.19.6e-7047.78uncharacterized protein LOC112019924 [Quercus suber][more]
XP_006491472.16.2e-6945.95uncharacterized protein LOC102626455 [Citrus sinensis][more]
Match NameE-valueIdentityDescription
AT1G43760.18.0e-1428.42DNAse I-like superfamily protein [more]
AT4G20520.18.8e-1334.88RNA binding;RNA-directed DNA polymerases [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 166..284
e-value: 5.6E-19
score: 68.5
NoneNo IPR availablePANTHERPTHR19446:SF440SUBFAMILY NOT NAMEDcoord: 28..287
NoneNo IPR availablePANTHERPTHR19446REVERSE TRANSCRIPTASEScoord: 28..287
NoneNo IPR availableCDDcd01650RT_nLTR_likecoord: 160..267
e-value: 1.24003E-31
score: 115.081
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 103..283

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy09g018420.1Lcy09g018420.1mRNA