Lcy09g017330 (gene) Sponge gourd (P93075) v1

Overview
NameLcy09g017330
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionSerine/threonine-protein phosphatase 7 long form-like
LocationChr09: 33423631 .. 33423906 (-)
RNA-Seq ExpressionLcy09g017330
SyntenyLcy09g017330
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCTTTCCTGATAAGTCCAATTCGAAAGTCCATCTAATGTATCTTCCGTTGCTTGAGGATTTTAATGAGGCTGGGACCTATAGTTGGGGTGCGGGTTGTCTCGCCTGGTTGTACAGGAACCTTTGCAAAAGTTCGGTTATCGACGCAAGAGACCTCGGTGGTTCCCTAATTTTGTTGCAATTATGGATAAGGGATCGATTCCCGACGTTAGCACCCCAACGACTTCACCGGTTCGAATACCAACTAGGAGATCGGCCTTTGGCAGTCCGGTAA

mRNA sequence

ATGATCTTTCCTGATAAGTCCAATTCGAAAGTCCATCTAATGTATCTTCCGTTGCTTGAGGATTTTAATGAGGCTGGGACCTATAGTTGGGGTGCGGGTTGTCTCGCCTGGTTGTACAGGAACCTTTGCAAAAGTTCGGTTATCGACGCAAGAGACCTCGGTGGTTCCCTAATTTTGTTGCAATTATGGATAAGGGATCGATTCCCGACGTTAGCACCCCAACGACTTCACCGGTTCGAATACCAACTAGGAGATCGGCCTTTGGCAGTCCGGTAA

Coding sequence (CDS)

ATGATCTTTCCTGATAAGTCCAATTCGAAAGTCCATCTAATGTATCTTCCGTTGCTTGAGGATTTTAATGAGGCTGGGACCTATAGTTGGGGTGCGGGTTGTCTCGCCTGGTTGTACAGGAACCTTTGCAAAAGTTCGGTTATCGACGCAAGAGACCTCGGTGGTTCCCTAATTTTGTTGCAATTATGGATAAGGGATCGATTCCCGACGTTAGCACCCCAACGACTTCACCGGTTCGAATACCAACTAGGAGATCGGCCTTTGGCAGTCCGGTAA

Protein sequence

MIFPDKSNSKVHLMYLPLLEDFNEAGTYSWGAGCLAWLYRNLCKSSVIDARDLGGSLILLQLWIRDRFPTLAPQRLHRFEYQLGDRPLAVR
Homology
BLAST of Lcy09g017330 vs. ExPASy Swiss-Prot
Match: Q9LNG5 (Serine/threonine-protein phosphatase 7 long form homolog OS=Arabidopsis thaliana OX=3702 GN=MAIL3 PE=2 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 1.1e-11
Identity = 34/75 (45.33%), Postives = 44/75 (58.67%), Query Frame = 0

Query: 2   IFPDKSNSKVHLMYLPLLEDFNEAGTYSWGAGCLAWLYRNLCKSSVIDARDLGGSLILLQ 61
           ++ DKS   V L +LPLL DF+E    SWG+  LA LYR LC++S      + G L+LLQ
Sbjct: 193 LYGDKSKHDVALTFLPLLRDFDEVAKLSWGSATLALLYRELCRASKRTVSTICGPLVLLQ 252

Query: 62  LWIRDRFPTLAPQRL 77
           LW  +R     P RL
Sbjct: 253 LWAWERLHVGRPGRL 267

BLAST of Lcy09g017330 vs. ExPASy Swiss-Prot
Match: F4IFD0 (Protein MAIN-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=At2g04865 PE=1 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 2.5e-11
Identity = 32/62 (51.61%), Postives = 42/62 (67.74%), Query Frame = 0

Query: 2   IFPDKSNSKVHLMYLPLLEDFNEAGTYSWGAGCLAWLYRNLCKSSVIDARDLGGSLILLQ 61
           IF   + +KV +MYLPL EDF++AGT++WGA  LA+LYR L  +SV     + G L LLQ
Sbjct: 186 IFSTTTGNKVPVMYLPLFEDFDDAGTFAWGAAALAFLYRALGNASVKSQSTICGCLTLLQ 245

Query: 62  LW 64
            W
Sbjct: 246 CW 247

BLAST of Lcy09g017330 vs. ExPASy Swiss-Prot
Match: Q9SK32 (Protein MAIN-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=MAIL1 PE=1 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 8.1e-10
Identity = 30/62 (48.39%), Postives = 38/62 (61.29%), Query Frame = 0

Query: 2   IFPDKSNSKVHLMYLPLLEDFNEAGTYSWGAGCLAWLYRNLCKSSVIDARDLGGSLILLQ 61
           IF      KV + YLPL EDF++AG Y+WGA  LA LYR L  +S+    ++ G L LLQ
Sbjct: 188 IFATTDGDKVSVKYLPLFEDFDQAGRYAWGAAALACLYRALGNASLKSQSNICGCLTLLQ 247

Query: 62  LW 64
            W
Sbjct: 248 CW 249

BLAST of Lcy09g017330 vs. ExPASy Swiss-Prot
Match: Q9LMT7 (Protein MAINTENANCE OF MERISTEMS OS=Arabidopsis thaliana OX=3702 GN=MAIN PE=1 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 6.8e-09
Identity = 29/62 (46.77%), Postives = 37/62 (59.68%), Query Frame = 0

Query: 2   IFPDKSNSKVHLMYLPLLEDFNEAGTYSWGAGCLAWLYRNLCKSSVIDARDLGGSLILLQ 61
           IF     SK+ + YL L EDF +AG Y+WGA  LA+LYR +  +S      +GG L LLQ
Sbjct: 176 IFATTDPSKISVDYLILFEDFEKAGEYAWGAAALAFLYRQIGNASQRSQSIIGGCLTLLQ 235

Query: 62  LW 64
            W
Sbjct: 236 CW 237

BLAST of Lcy09g017330 vs. ExPASy TrEMBL
Match: A0A438EWE0 (Serine/threonine-protein phosphatase 7 long form-like OS=Vitis vinifera OX=29760 GN=MAIL3_125 PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 2.4e-25
Identity = 56/92 (60.87%), Postives = 69/92 (75.00%), Query Frame = 0

Query: 2   IFPDKSNSKVHLMYLPLLEDFNEAGTYSWGAGCLAWLYRNLCKSSVIDARDLGGSLILLQ 61
           +F DKSN++VHLM+LPLL+DF   GTYSWG+ CLAWLYR +C++S IDA D+ G LILLQ
Sbjct: 183 LFADKSNNRVHLMFLPLLQDFGVTGTYSWGSACLAWLYREMCRASRIDAHDVSGPLILLQ 242

Query: 62  LWIRDRFPTLAPQRLHRFEYQ--LGDRPLAVR 92
           LWI DRFP +AP RLH   +   L   PL +R
Sbjct: 243 LWIWDRFPFMAPMRLHPTPHDEVLPQPPLGMR 274

BLAST of Lcy09g017330 vs. ExPASy TrEMBL
Match: A0A438BRT1 (Serine/threonine-protein phosphatase 7 long form-like OS=Vitis vinifera OX=29760 GN=MAIL3_177 PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 2.4e-25
Identity = 56/92 (60.87%), Postives = 69/92 (75.00%), Query Frame = 0

Query: 2   IFPDKSNSKVHLMYLPLLEDFNEAGTYSWGAGCLAWLYRNLCKSSVIDARDLGGSLILLQ 61
           +F DKSN++VHLM+LPLL+DF   GTYSWG+ CLAWLYR +C++S IDA D+ G LILLQ
Sbjct: 109 LFADKSNNRVHLMFLPLLQDFGVTGTYSWGSACLAWLYREMCRASRIDAHDVSGPLILLQ 168

Query: 62  LWIRDRFPTLAPQRLHRFEYQ--LGDRPLAVR 92
           LWI DRFP +AP RLH   +   L   PL +R
Sbjct: 169 LWIWDRFPFMAPMRLHPTPHDEVLPQPPLGMR 200

BLAST of Lcy09g017330 vs. ExPASy TrEMBL
Match: A0A438KL14 (Serine/threonine-protein phosphatase 7 long form-like OS=Vitis vinifera OX=29760 GN=MAIL3_10 PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 2.4e-25
Identity = 56/92 (60.87%), Postives = 69/92 (75.00%), Query Frame = 0

Query: 2   IFPDKSNSKVHLMYLPLLEDFNEAGTYSWGAGCLAWLYRNLCKSSVIDARDLGGSLILLQ 61
           +F DKSN++VHLM+LPLL+DF   GTYSWG+ CLAWLYR +C++S IDA D+ G LILLQ
Sbjct: 155 LFADKSNNRVHLMFLPLLQDFGVTGTYSWGSACLAWLYREMCRASRIDAHDVSGPLILLQ 214

Query: 62  LWIRDRFPTLAPQRLHRFEYQ--LGDRPLAVR 92
           LWI DRFP +AP RLH   +   L   PL +R
Sbjct: 215 LWIWDRFPFMAPMRLHPAPHDEILPQPPLGMR 246

BLAST of Lcy09g017330 vs. ExPASy TrEMBL
Match: A0A6J1DJK3 (serine/threonine-protein phosphatase 7 long form homolog OS=Momordica charantia OX=3673 GN=LOC111021487 PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 9.2e-25
Identity = 54/90 (60.00%), Postives = 65/90 (72.22%), Query Frame = 0

Query: 2   IFPDKSNSKVHLMYLPLLEDFNEAGTYSWGAGCLAWLYRNLCKSSVIDARDLGGSLILLQ 61
           +F DK N+ VHLM+LPLL DF  AG +SWG  CL WLYRNLCK    D+RD+ G +ILLQ
Sbjct: 253 LFADKYNNLVHLMFLPLLADFEVAGRFSWGGACLTWLYRNLCKVCRSDSRDIAGPIILLQ 312

Query: 62  LWIRDRFPTLAPQRLHRFEYQLGDRPLAVR 92
           +W  DRFPT+APQR H  ++ L  RPLA R
Sbjct: 313 VWAWDRFPTMAPQRRHISDHDLVGRPLAAR 342

BLAST of Lcy09g017330 vs. ExPASy TrEMBL
Match: A0A6J1D8N6 (serine/threonine-protein phosphatase 7 long form homolog OS=Momordica charantia OX=3673 GN=LOC111018266 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 1.2e-24
Identity = 54/90 (60.00%), Postives = 66/90 (73.33%), Query Frame = 0

Query: 2   IFPDKSNSKVHLMYLPLLEDFNEAGTYSWGAGCLAWLYRNLCKSSVIDARDLGGSLILLQ 61
           +F DKSN+ VHLM+LPLL DF  AG +SWG  CLAWLYR LCK+   D+RD+ G +ILLQ
Sbjct: 185 LFADKSNNLVHLMFLPLLSDFGVAGRFSWGGACLAWLYRTLCKACRSDSRDIVGPIILLQ 244

Query: 62  LWIRDRFPTLAPQRLHRFEYQLGDRPLAVR 92
           +W  DRFPT+APQ  H   ++L D PLA R
Sbjct: 245 VWSWDRFPTMAPQHRHISNHELVDLPLAAR 274

BLAST of Lcy09g017330 vs. NCBI nr
Match: XP_038896629.1 (protein MAIN-LIKE 2-like [Benincasa hispida])

HSP 1 Score: 150.6 bits (379), Expect = 6.5e-33
Identity = 65/91 (71.43%), Postives = 77/91 (84.62%), Query Frame = 0

Query: 1   MIFPDKSNSKVHLMYLPLLEDFNEAGTYSWGAGCLAWLYRNLCKSSVIDARDLGGSLILL 60
           ++FPDKSNS+VHLMYLPLL DF+  GTYSWGAGCL WLYR LCKS+VID +D+ G L+L+
Sbjct: 95  LVFPDKSNSRVHLMYLPLLMDFDVVGTYSWGAGCLTWLYRQLCKSAVIDGKDIVGPLLLI 154

Query: 61  QLWIRDRFPTLAPQRLHRFEYQLGDRPLAVR 92
           Q+W  D+FP LAPQRLHR+E  LGD PLAVR
Sbjct: 155 QIWAWDQFPLLAPQRLHRYENNLGDIPLAVR 185

BLAST of Lcy09g017330 vs. NCBI nr
Match: XP_038896340.1 (protein MAIN-LIKE 2-like [Benincasa hispida])

HSP 1 Score: 139.4 bits (350), Expect = 1.5e-29
Identity = 61/91 (67.03%), Postives = 74/91 (81.32%), Query Frame = 0

Query: 1   MIFPDKSNSKVHLMYLPLLEDFNEAGTYSWGAGCLAWLYRNLCKSSVIDARDLGGSLILL 60
           ++FP+KSNS+VHLMYLPLL DF+   TYSWGAGCLAWLY+ LCKS+VID +D+ G L+LL
Sbjct: 95  LVFPNKSNSRVHLMYLPLLIDFDVTETYSWGAGCLAWLYKQLCKSAVIDGKDIVGPLLLL 154

Query: 61  QLWIRDRFPTLAPQRLHRFEYQLGDRPLAVR 92
            +W  DRF  LAP+RLH +E  L DRPLAVR
Sbjct: 155 HIWAWDRFSLLAPRRLHPYENNLSDRPLAVR 185

BLAST of Lcy09g017330 vs. NCBI nr
Match: RVW52005.1 (Serine/threonine-protein phosphatase 7 long form-like [Vitis vinifera])

HSP 1 Score: 124.4 bits (311), Expect = 5.0e-25
Identity = 56/92 (60.87%), Postives = 69/92 (75.00%), Query Frame = 0

Query: 2   IFPDKSNSKVHLMYLPLLEDFNEAGTYSWGAGCLAWLYRNLCKSSVIDARDLGGSLILLQ 61
           +F DKSN++VHLM+LPLL+DF   GTYSWG+ CLAWLYR +C++S IDA D+ G LILLQ
Sbjct: 183 LFADKSNNRVHLMFLPLLQDFGVTGTYSWGSACLAWLYREMCRASRIDAHDVSGPLILLQ 242

Query: 62  LWIRDRFPTLAPQRLHRFEYQ--LGDRPLAVR 92
           LWI DRFP +AP RLH   +   L   PL +R
Sbjct: 243 LWIWDRFPFMAPMRLHPTPHDEVLPQPPLGMR 274

BLAST of Lcy09g017330 vs. NCBI nr
Match: RVX21888.1 (Serine/threonine-protein phosphatase 7 long form-like [Vitis vinifera])

HSP 1 Score: 124.4 bits (311), Expect = 5.0e-25
Identity = 56/92 (60.87%), Postives = 69/92 (75.00%), Query Frame = 0

Query: 2   IFPDKSNSKVHLMYLPLLEDFNEAGTYSWGAGCLAWLYRNLCKSSVIDARDLGGSLILLQ 61
           +F DKSN++VHLM+LPLL+DF   GTYSWG+ CLAWLYR +C++S IDA D+ G LILLQ
Sbjct: 155 LFADKSNNRVHLMFLPLLQDFGVTGTYSWGSACLAWLYREMCRASRIDAHDVSGPLILLQ 214

Query: 62  LWIRDRFPTLAPQRLHRFEYQ--LGDRPLAVR 92
           LWI DRFP +AP RLH   +   L   PL +R
Sbjct: 215 LWIWDRFPFMAPMRLHPAPHDEILPQPPLGMR 246

BLAST of Lcy09g017330 vs. NCBI nr
Match: RVW13658.1 (Serine/threonine-protein phosphatase 7 long form-like [Vitis vinifera])

HSP 1 Score: 124.4 bits (311), Expect = 5.0e-25
Identity = 56/92 (60.87%), Postives = 69/92 (75.00%), Query Frame = 0

Query: 2   IFPDKSNSKVHLMYLPLLEDFNEAGTYSWGAGCLAWLYRNLCKSSVIDARDLGGSLILLQ 61
           +F DKSN++VHLM+LPLL+DF   GTYSWG+ CLAWLYR +C++S IDA D+ G LILLQ
Sbjct: 109 LFADKSNNRVHLMFLPLLQDFGVTGTYSWGSACLAWLYREMCRASRIDAHDVSGPLILLQ 168

Query: 62  LWIRDRFPTLAPQRLHRFEYQ--LGDRPLAVR 92
           LWI DRFP +AP RLH   +   L   PL +R
Sbjct: 169 LWIWDRFPFMAPMRLHPTPHDEVLPQPPLGMR 200

BLAST of Lcy09g017330 vs. TAIR 10
Match: AT1G48120.1 (hydrolases;protein serine/threonine phosphatases )

HSP 1 Score: 70.5 bits (171), Expect = 8.0e-13
Identity = 34/75 (45.33%), Postives = 44/75 (58.67%), Query Frame = 0

Query: 2   IFPDKSNSKVHLMYLPLLEDFNEAGTYSWGAGCLAWLYRNLCKSSVIDARDLGGSLILLQ 61
           ++ DKS   V L +LPLL DF+E    SWG+  LA LYR LC++S      + G L+LLQ
Sbjct: 193 LYGDKSKHDVALTFLPLLRDFDEVAKLSWGSATLALLYRELCRASKRTVSTICGPLVLLQ 252

Query: 62  LWIRDRFPTLAPQRL 77
           LW  +R     P RL
Sbjct: 253 LWAWERLHVGRPGRL 267

BLAST of Lcy09g017330 vs. TAIR 10
Match: AT2G04865.1 (Aminotransferase-like, plant mobile domain family protein )

HSP 1 Score: 69.3 bits (168), Expect = 1.8e-12
Identity = 32/62 (51.61%), Postives = 42/62 (67.74%), Query Frame = 0

Query: 2   IFPDKSNSKVHLMYLPLLEDFNEAGTYSWGAGCLAWLYRNLCKSSVIDARDLGGSLILLQ 61
           IF   + +KV +MYLPL EDF++AGT++WGA  LA+LYR L  +SV     + G L LLQ
Sbjct: 186 IFSTTTGNKVPVMYLPLFEDFDDAGTFAWGAAALAFLYRALGNASVKSQSTICGCLTLLQ 245

Query: 62  LW 64
            W
Sbjct: 246 CW 247

BLAST of Lcy09g017330 vs. TAIR 10
Match: AT2G25010.1 (Aminotransferase-like, plant mobile domain family protein )

HSP 1 Score: 64.3 bits (155), Expect = 5.7e-11
Identity = 30/62 (48.39%), Postives = 38/62 (61.29%), Query Frame = 0

Query: 2   IFPDKSNSKVHLMYLPLLEDFNEAGTYSWGAGCLAWLYRNLCKSSVIDARDLGGSLILLQ 61
           IF      KV + YLPL EDF++AG Y+WGA  LA LYR L  +S+    ++ G L LLQ
Sbjct: 188 IFATTDGDKVSVKYLPLFEDFDQAGRYAWGAAALACLYRALGNASLKSQSNICGCLTLLQ 247

Query: 62  LW 64
            W
Sbjct: 248 CW 249

BLAST of Lcy09g017330 vs. TAIR 10
Match: AT1G17930.1 (Aminotransferase-like, plant mobile domain family protein )

HSP 1 Score: 61.2 bits (147), Expect = 4.9e-10
Identity = 29/62 (46.77%), Postives = 37/62 (59.68%), Query Frame = 0

Query: 2   IFPDKSNSKVHLMYLPLLEDFNEAGTYSWGAGCLAWLYRNLCKSSVIDARDLGGSLILLQ 61
           IF     SK+ + YL L EDF +AG Y+WGA  LA+LYR +  +S      +GG L LLQ
Sbjct: 176 IFATTDPSKISVDYLILFEDFEKAGEYAWGAAALAFLYRQIGNASQRSQSIIGGCLTLLQ 235

Query: 62  LW 64
            W
Sbjct: 236 CW 237

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9LNG51.1e-1145.33Serine/threonine-protein phosphatase 7 long form homolog OS=Arabidopsis thaliana... [more]
F4IFD02.5e-1151.61Protein MAIN-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=At2g04865 PE=1 SV=1[more]
Q9SK328.1e-1048.39Protein MAIN-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=MAIL1 PE=1 SV=1[more]
Q9LMT76.8e-0946.77Protein MAINTENANCE OF MERISTEMS OS=Arabidopsis thaliana OX=3702 GN=MAIN PE=1 SV... [more]
Match NameE-valueIdentityDescription
A0A438EWE02.4e-2560.87Serine/threonine-protein phosphatase 7 long form-like OS=Vitis vinifera OX=29760... [more]
A0A438BRT12.4e-2560.87Serine/threonine-protein phosphatase 7 long form-like OS=Vitis vinifera OX=29760... [more]
A0A438KL142.4e-2560.87Serine/threonine-protein phosphatase 7 long form-like OS=Vitis vinifera OX=29760... [more]
A0A6J1DJK39.2e-2560.00serine/threonine-protein phosphatase 7 long form homolog OS=Momordica charantia ... [more]
A0A6J1D8N61.2e-2460.00serine/threonine-protein phosphatase 7 long form homolog OS=Momordica charantia ... [more]
Match NameE-valueIdentityDescription
XP_038896629.16.5e-3371.43protein MAIN-LIKE 2-like [Benincasa hispida][more]
XP_038896340.11.5e-2967.03protein MAIN-LIKE 2-like [Benincasa hispida][more]
RVW52005.15.0e-2560.87Serine/threonine-protein phosphatase 7 long form-like [Vitis vinifera][more]
RVX21888.15.0e-2560.87Serine/threonine-protein phosphatase 7 long form-like [Vitis vinifera][more]
RVW13658.15.0e-2560.87Serine/threonine-protein phosphatase 7 long form-like [Vitis vinifera][more]
Match NameE-valueIdentityDescription
AT1G48120.18.0e-1345.33hydrolases;protein serine/threonine phosphatases [more]
AT2G04865.11.8e-1251.61Aminotransferase-like, plant mobile domain family protein [more]
AT2G25010.15.7e-1148.39Aminotransferase-like, plant mobile domain family protein [more]
AT1G17930.14.9e-1046.77Aminotransferase-like, plant mobile domain family protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019557Aminotransferase-like, plant mobile domainPFAMPF10536PMDcoord: 1..78
e-value: 4.6E-18
score: 65.5
NoneNo IPR availablePANTHERPTHR46033:SF8SERINE/THREONINE-PROTEIN PHOSPHATASE 7 LONG FORM HOMOLOG ISOFORM X1coord: 2..86
IPR044824Protein MAINTENANCE OF MERISTEMS-likePANTHERPTHR46033PROTEIN MAIN-LIKE 2coord: 2..86

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy09g017330.1Lcy09g017330.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010073 meristem maintenance
biological_process GO:0048507 meristem development