Lcy09g016670 (gene) Sponge gourd (P93075) v1

Overview
NameLcy09g016670
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionGag/pol polyprotein-maize retrotransposon Hopscotch
LocationChr09: 30155577 .. 30156422 (+)
RNA-Seq ExpressionLcy09g016670
SyntenyLcy09g016670
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGCAAATGCATCCTCAAGCAACACAAGTGCTGTCAATGTTATAACAACTCAACAAATTGTTATACCCACAATTACCAACACCCATTTTTCTTCCTTTTCGAATCCACTCAATTCTACCCTTGGTGTAAATCTTGATGAAAACAATGTTTTGTTATGGAAATCAATGGTCATTGCTGTTTTGAGAGGACAACGATTGGATGGGTATATTCAAGGAACCAAGACCTGTCCACCTGAATTTATAAGAGTGTCAGATGCGGATGGAGAAACTATCTTGGAAGCCAACAAAGAATTTGAAAACTGGGTCACTATGGATCAAGCTCTCCTAGGATGGCTTTATAGTACAATGACACCAACTGTGGCATCAGAAGTGATTAACATCAAAACATCAAGGGGAGTATGGAAAGCTATTGAAGAATTATATGGCTCCACAAACAAGTCTAGAATAAATCAACTCAAAAGGGCACTACAAACCACAAGGAAGAACAACACTAAGATGTCTGAATATTTGAGCACCATGAAGCAAATCGCAGATAATCTCTCACTAGCAGGGGAAAGTATTTCAGTAAGTTCTCTTATTTCAAGTGTGCTCACAGGACTAGACTCTGAATATCTCCCTATTATTTATCAAATCAATGGCAAAAATGACATGTCTTGGCATGAACTACATGCTACACTAATTACCTTTGAAAATACACTACAATATATGAGTTCAATGCAGAGTGGTGGTGAAATGGTGAATTTGACAGCCAACTATGCTTCAAAAAAACAAGGGGCAAATGAACACCATAAGTCTCAAACTCCATATCAGATGACAAAATCAAGGAAGAAGAAATCAATATAA

mRNA sequence

ATGGCTGCAAATGCATCCTCAAGCAACACAAGTGCTGTCAATGTTATAACAACTCAACAAATTGTTATACCCACAATTACCAACACCCATTTTTCTTCCTTTTCGAATCCACTCAATTCTACCCTTGGTGTAAATCTTGATGAAAACAATGTTTTGTTATGGAAATCAATGGTCATTGCTGTTTTGAGAGGACAACGATTGGATGGGTATATTCAAGGAACCAAGACCTGTCCACCTGAATTTATAAGAGTGTCAGATGCGGATGGAGAAACTATCTTGGAAGCCAACAAAGAATTTGAAAACTGGGTCACTATGGATCAAGCTCTCCTAGGATGGCTTTATAGTACAATGACACCAACTGTGGCATCAGAAGTGATTAACATCAAAACATCAAGGGGAGTATGGAAAGCTATTGAAGAATTATATGGCTCCACAAACAAGTCTAGAATAAATCAACTCAAAAGGGCACTACAAACCACAAGGAAGAACAACACTAAGATGTCTGAATATTTGAGCACCATGAAGCAAATCGCAGATAATCTCTCACTAGCAGGGGAAAGTATTTCAGTAAGTTCTCTTATTTCAAGTGTGCTCACAGGACTAGACTCTGAATATCTCCCTATTATTTATCAAATCAATGGCAAAAATGACATGTCTTGGCATGAACTACATGCTACACTAATTACCTTTGAAAATACACTACAATATATGAGTTCAATGCAGAGTGGTGGTGAAATGGTGAATTTGACAGCCAACTATGCTTCAAAAAAACAAGGGGCAAATGAACACCATAAGTCTCAAACTCCATATCAGATGACAAAATCAAGGAAGAAGAAATCAATATAA

Coding sequence (CDS)

ATGGCTGCAAATGCATCCTCAAGCAACACAAGTGCTGTCAATGTTATAACAACTCAACAAATTGTTATACCCACAATTACCAACACCCATTTTTCTTCCTTTTCGAATCCACTCAATTCTACCCTTGGTGTAAATCTTGATGAAAACAATGTTTTGTTATGGAAATCAATGGTCATTGCTGTTTTGAGAGGACAACGATTGGATGGGTATATTCAAGGAACCAAGACCTGTCCACCTGAATTTATAAGAGTGTCAGATGCGGATGGAGAAACTATCTTGGAAGCCAACAAAGAATTTGAAAACTGGGTCACTATGGATCAAGCTCTCCTAGGATGGCTTTATAGTACAATGACACCAACTGTGGCATCAGAAGTGATTAACATCAAAACATCAAGGGGAGTATGGAAAGCTATTGAAGAATTATATGGCTCCACAAACAAGTCTAGAATAAATCAACTCAAAAGGGCACTACAAACCACAAGGAAGAACAACACTAAGATGTCTGAATATTTGAGCACCATGAAGCAAATCGCAGATAATCTCTCACTAGCAGGGGAAAGTATTTCAGTAAGTTCTCTTATTTCAAGTGTGCTCACAGGACTAGACTCTGAATATCTCCCTATTATTTATCAAATCAATGGCAAAAATGACATGTCTTGGCATGAACTACATGCTACACTAATTACCTTTGAAAATACACTACAATATATGAGTTCAATGCAGAGTGGTGGTGAAATGGTGAATTTGACAGCCAACTATGCTTCAAAAAAACAAGGGGCAAATGAACACCATAAGTCTCAAACTCCATATCAGATGACAAAATCAAGGAAGAAGAAATCAATATAA

Protein sequence

MAANASSSNTSAVNVITTQQIVIPTITNTHFSSFSNPLNSTLGVNLDENNVLLWKSMVIAVLRGQRLDGYIQGTKTCPPEFIRVSDADGETILEANKEFENWVTMDQALLGWLYSTMTPTVASEVINIKTSRGVWKAIEELYGSTNKSRINQLKRALQTTRKNNTKMSEYLSTMKQIADNLSLAGESISVSSLISSVLTGLDSEYLPIIYQINGKNDMSWHELHATLITFENTLQYMSSMQSGGEMVNLTANYASKKQGANEHHKSQTPYQMTKSRKKKSI
Homology
BLAST of Lcy09g016670 vs. ExPASy TrEMBL
Match: A0A6J1DU77 (uncharacterized protein LOC111024384 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111024384 PE=4 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 9.7e-57
Identity = 122/274 (44.53%), Postives = 184/274 (67.15%), Query Frame = 0

Query: 1   MAANASSSNTSAVNVITTQQIVIPTITNTHFSSFSNPLNSTLGVNLDENNVLLWKSMVIA 60
           M    + +++    V+T   +  P  +    +SF +PL + L V LD+ N  LW+ MV+A
Sbjct: 1   MTTEETENSSVPPQVVTNVAVPTPNPSPQFNTSFGHPLGTVLTVKLDDKNYSLWRGMVLA 60

Query: 61  VLRGQRLDGYIQGTKTCPPEFIRVSDADGET-ILEANKEFENWVTMDQALLGWLYSTMTP 120
           VLRGQ+ DGY+ GT   PP+F+   + +G +  L+ N E+  W  +DQALLGWL+ +MTP
Sbjct: 61  VLRGQKFDGYVLGTLAKPPQFLVSPETEGTSDHLQVNPEYVEWQAVDQALLGWLFGSMTP 120

Query: 121 TVASEVINIKTSRGVWKAIEELYGSTNKSRINQLKRALQTTRKNNTKMSEYLSTMKQIAD 180
           ++A +V++ ++SR VWKA+E+LYG+T+K+RINQL+  LQ T+KN+ KMSEYL  MKQ ++
Sbjct: 121 SIACDVVDFRSSREVWKALEDLYGATSKARINQLRNVLQNTKKNSLKMSEYLGLMKQASE 180

Query: 181 NLSLAGESISVSSLISSVLTGLDSEYLPIIYQINGKNDMSWHELHATLITFENTLQYMS- 240
           +L LAGE ++ + L+S VL+GL++EYLPI+ QI GK+  SW EL ATL+TFENTL  ++ 
Sbjct: 181 SLKLAGEPVAFNYLMSCVLSGLEAEYLPIVCQIEGKDSTSWQELFATLVTFENTLMRLNI 240

Query: 241 -SMQSGGEMVNLTANYASKKQ---GANEHHKSQT 269
            S  +   + + + NY   KQ   G  + H+SQ+
Sbjct: 241 VSTATAEGISDGSXNYVHSKQNSVGNRQFHQSQS 274

BLAST of Lcy09g016670 vs. ExPASy TrEMBL
Match: A0A6J1DTZ7 (uncharacterized protein LOC111024384 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111024384 PE=4 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 9.7e-57
Identity = 122/274 (44.53%), Postives = 184/274 (67.15%), Query Frame = 0

Query: 1   MAANASSSNTSAVNVITTQQIVIPTITNTHFSSFSNPLNSTLGVNLDENNVLLWKSMVIA 60
           M    + +++    V+T   +  P  +    +SF +PL + L V LD+ N  LW+ MV+A
Sbjct: 1   MTTEETENSSVPPQVVTNVAVPTPNPSPQFNTSFGHPLGTVLTVKLDDKNYSLWRGMVLA 60

Query: 61  VLRGQRLDGYIQGTKTCPPEFIRVSDADGET-ILEANKEFENWVTMDQALLGWLYSTMTP 120
           VLRGQ+ DGY+ GT   PP+F+   + +G +  L+ N E+  W  +DQALLGWL+ +MTP
Sbjct: 61  VLRGQKFDGYVLGTLAKPPQFLVSPETEGTSDHLQVNPEYVEWQAVDQALLGWLFGSMTP 120

Query: 121 TVASEVINIKTSRGVWKAIEELYGSTNKSRINQLKRALQTTRKNNTKMSEYLSTMKQIAD 180
           ++A +V++ ++SR VWKA+E+LYG+T+K+RINQL+  LQ T+KN+ KMSEYL  MKQ ++
Sbjct: 121 SIACDVVDFRSSREVWKALEDLYGATSKARINQLRNVLQNTKKNSLKMSEYLGLMKQASE 180

Query: 181 NLSLAGESISVSSLISSVLTGLDSEYLPIIYQINGKNDMSWHELHATLITFENTLQYMS- 240
           +L LAGE ++ + L+S VL+GL++EYLPI+ QI GK+  SW EL ATL+TFENTL  ++ 
Sbjct: 181 SLKLAGEPVAFNYLMSCVLSGLEAEYLPIVCQIEGKDSTSWQELFATLVTFENTLMRLNI 240

Query: 241 -SMQSGGEMVNLTANYASKKQ---GANEHHKSQT 269
            S  +   + + + NY   KQ   G  + H+SQ+
Sbjct: 241 VSTATAEGISDGSXNYVHSKQNSVGNRQFHQSQS 274

BLAST of Lcy09g016670 vs. ExPASy TrEMBL
Match: A0A5C7GVK1 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_027676 PE=4 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 2.4e-47
Identity = 108/255 (42.35%), Postives = 159/255 (62.35%), Query Frame = 0

Query: 17  TTQQIVIPTITNTHFSSFSNPLNSTLGVNLDENNVLLWKSMVIAVLRGQRLDGYIQGTKT 76
           T+ + V+   T++      NPL S   V L+  N LLWK++V+ V+RG R++GYI G K 
Sbjct: 150 TSPESVVRKETSSSEKKVGNPLGSYCSVKLNHENYLLWKNLVLPVIRGNRMEGYITGAKK 209

Query: 77  CPPEFIRVS-DADGETILEANKEFENWVTMDQALLGWLYSTMTPTVASEVINIKTSRGVW 136
           CPPEFI    + + +  LE N E+E+W+  DQ LLGWLY++M P VASEVI  +TS+ +W
Sbjct: 210 CPPEFIITDLEQEADETLEENPEYEDWIVHDQILLGWLYNSMEPDVASEVIGSETSKDLW 269

Query: 137 KAIEELYGSTNKSRINQLKRALQTTRKNNTKMSEYLSTMKQIADNLSLAGESISVSSLIS 196
           ++I  L+G   KS I   KR  Q  +K   KMS+YL   K++ADNL+LAG  + +  L+S
Sbjct: 270 ESINTLFGLKTKSNIAYYKREFQKLQKGGMKMSDYLKAAKKLADNLALAGRPVPLEDLVS 329

Query: 197 SVLTGLDS-EYLPIIYQINGKNDMSWHELHATLITFENTLQYMSSMQSGGEMVNLTANYA 256
            VL GLDS EY P++ QIN + D+SW +L A L+++E  L+ +++  S   +  ++ANY 
Sbjct: 330 QVLDGLDSVEYNPLVCQINEREDISWIDLQAKLLSYEKRLEKINAGFSSINLGQVSANYV 389

Query: 257 SKKQ--GANEHHKSQ 268
             K   G    ++SQ
Sbjct: 390 GTKNTGGQTGQNRSQ 404

BLAST of Lcy09g016670 vs. ExPASy TrEMBL
Match: A0A5C7HRI6 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_014244 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 4.2e-44
Identity = 104/272 (38.24%), Postives = 166/272 (61.03%), Query Frame = 0

Query: 5   ASSSNTSAVNVITTQQIVIPTITNTHFSSFSNPLNSTLGVNLDENNVLLWKSMVIAVLRG 64
           A+ +++S   ++T Q  V+ +IT      F N +  +  + LD NN  LWK+MV  V++G
Sbjct: 47  ATGASSSTAPMMTQQPSVVSSIT-----PFGNSMGKSFAIKLDRNNYTLWKTMVTTVIKG 106

Query: 65  QRLDGYIQGTKTCPPEFIRVS-DADGET--ILEANKEFENWVTMDQALLGWLYSTMTPTV 124
            RLDGY+ GT+ CPPEFI     A G T   L  N  +E WV  D  L+GWLY +MT +V
Sbjct: 107 HRLDGYLFGTRPCPPEFIPTEITAQGATGFGLRLNPNYEQWVVNDHLLMGWLYGSMTESV 166

Query: 125 ASEVINIKTSRGVWKAIEELYGSTNKSRINQLKRALQTTRKNNTKMSEYLSTMKQIADNL 184
           A++V+   TS  +W A+E LYG+ +KS++N ++ ++QT RK    M EYL  MK  AD L
Sbjct: 167 ATQVMGCSTSANLWTALENLYGAHSKSKMNAVRTSIQTIRKGTISMEEYLKQMKSWADVL 226

Query: 185 SLAGESISVSSLISSVLTGLDSEYLPIIYQINGKNDMSWHELHATLITFENTLQYMSSMQ 244
           ++AG+      LIS+VL+GLD++Y+PI+  I  +  +SW EL  TL+++++ L++++S+ 
Sbjct: 227 AIAGDPYPEPLLISNVLSGLDADYMPIVVLIESRESISWQELQDTLLSYDSKLEHINSLN 286

Query: 245 --SGGEMVNLTANYASKKQGANEHHKSQTPYQ 272
             +G       AN+ + + G +  +K+ +  Q
Sbjct: 287 KIAGAPF----ANFVTSRGGNSNFNKNYSQSQ 309

BLAST of Lcy09g016670 vs. ExPASy TrEMBL
Match: A0A803R2Q2 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 4.2e-44
Identity = 102/263 (38.78%), Postives = 164/263 (62.36%), Query Frame = 0

Query: 6   SSSNTSAVNVITTQQIVIPTITNTH--FSSFSNPLNSTLGVNLDENNVLLWKSMVIAVLR 65
           +  NT A + +T    + P+ +N     + FSN L+    + LD NN  LWK+MV  ++R
Sbjct: 19  AGQNTGAASTMT----LTPSSSNPSPISTPFSNTLSQPFSLKLDRNNFPLWKTMVNTIIR 78

Query: 66  GQRLDGYIQGTKTCPPEFIRVS----DADGETILEANKEFENWVTMDQALLGWLYSTMTP 125
           G RLDG+I G +  PPEFIR      DA G   ++ N E+E W+  DQ L+GWLY +MT 
Sbjct: 79  GHRLDGFINGNRPAPPEFIRTGEPNVDAPGSG-MDINPEYETWLVHDQLLMGWLYGSMTE 138

Query: 126 TVASEVINIKTSRGVWKAIEELYGSTNKSRINQLKRALQTTRKNNTKMSEYLSTMKQIAD 185
            +ASEV+  +++  +W A+EELYG+ +++ +++L+  +QTTRK +  M+EYL   +  AD
Sbjct: 139 AIASEVMGCQSALALWNALEELYGAHSRANMDELRTKIQTTRKGSQSMAEYLKMKRMWAD 198

Query: 186 NLSLAGESISVSSLISSVLTGLDSEYLPIIYQINGKNDMSWHELHATLITFENTLQYMSS 245
           +L+LAGE      L+S+VL+GLD EYL I+  I  +   SW +L + L++F+  L+ +++
Sbjct: 199 SLALAGEPYPERHLVSNVLSGLDVEYLSIVVLIESQESTSWQQLQSMLLSFDGRLERLNT 258

Query: 246 MQSGGEMV-NLTANYASKKQGAN 262
           + +  ++V N +AN+A K   +N
Sbjct: 259 ISASSKLVGNASANFAQKPGSSN 276

BLAST of Lcy09g016670 vs. NCBI nr
Match: XP_022157748.1 (uncharacterized protein LOC111024384 isoform X1 [Momordica charantia])

HSP 1 Score: 230.3 bits (586), Expect = 2.0e-56
Identity = 122/274 (44.53%), Postives = 184/274 (67.15%), Query Frame = 0

Query: 1   MAANASSSNTSAVNVITTQQIVIPTITNTHFSSFSNPLNSTLGVNLDENNVLLWKSMVIA 60
           M    + +++    V+T   +  P  +    +SF +PL + L V LD+ N  LW+ MV+A
Sbjct: 1   MTTEETENSSVPPQVVTNVAVPTPNPSPQFNTSFGHPLGTVLTVKLDDKNYSLWRGMVLA 60

Query: 61  VLRGQRLDGYIQGTKTCPPEFIRVSDADGET-ILEANKEFENWVTMDQALLGWLYSTMTP 120
           VLRGQ+ DGY+ GT   PP+F+   + +G +  L+ N E+  W  +DQALLGWL+ +MTP
Sbjct: 61  VLRGQKFDGYVLGTLAKPPQFLVSPETEGTSDHLQVNPEYVEWQAVDQALLGWLFGSMTP 120

Query: 121 TVASEVINIKTSRGVWKAIEELYGSTNKSRINQLKRALQTTRKNNTKMSEYLSTMKQIAD 180
           ++A +V++ ++SR VWKA+E+LYG+T+K+RINQL+  LQ T+KN+ KMSEYL  MKQ ++
Sbjct: 121 SIACDVVDFRSSREVWKALEDLYGATSKARINQLRNVLQNTKKNSLKMSEYLGLMKQASE 180

Query: 181 NLSLAGESISVSSLISSVLTGLDSEYLPIIYQINGKNDMSWHELHATLITFENTLQYMS- 240
           +L LAGE ++ + L+S VL+GL++EYLPI+ QI GK+  SW EL ATL+TFENTL  ++ 
Sbjct: 181 SLKLAGEPVAFNYLMSCVLSGLEAEYLPIVCQIEGKDSTSWQELFATLVTFENTLMRLNI 240

Query: 241 -SMQSGGEMVNLTANYASKKQ---GANEHHKSQT 269
            S  +   + + + NY   KQ   G  + H+SQ+
Sbjct: 241 VSTATAEGISDGSXNYVHSKQNSVGNRQFHQSQS 274

BLAST of Lcy09g016670 vs. NCBI nr
Match: XP_022157750.1 (uncharacterized protein LOC111024384 isoform X2 [Momordica charantia])

HSP 1 Score: 230.3 bits (586), Expect = 2.0e-56
Identity = 122/274 (44.53%), Postives = 184/274 (67.15%), Query Frame = 0

Query: 1   MAANASSSNTSAVNVITTQQIVIPTITNTHFSSFSNPLNSTLGVNLDENNVLLWKSMVIA 60
           M    + +++    V+T   +  P  +    +SF +PL + L V LD+ N  LW+ MV+A
Sbjct: 1   MTTEETENSSVPPQVVTNVAVPTPNPSPQFNTSFGHPLGTVLTVKLDDKNYSLWRGMVLA 60

Query: 61  VLRGQRLDGYIQGTKTCPPEFIRVSDADGET-ILEANKEFENWVTMDQALLGWLYSTMTP 120
           VLRGQ+ DGY+ GT   PP+F+   + +G +  L+ N E+  W  +DQALLGWL+ +MTP
Sbjct: 61  VLRGQKFDGYVLGTLAKPPQFLVSPETEGTSDHLQVNPEYVEWQAVDQALLGWLFGSMTP 120

Query: 121 TVASEVINIKTSRGVWKAIEELYGSTNKSRINQLKRALQTTRKNNTKMSEYLSTMKQIAD 180
           ++A +V++ ++SR VWKA+E+LYG+T+K+RINQL+  LQ T+KN+ KMSEYL  MKQ ++
Sbjct: 121 SIACDVVDFRSSREVWKALEDLYGATSKARINQLRNVLQNTKKNSLKMSEYLGLMKQASE 180

Query: 181 NLSLAGESISVSSLISSVLTGLDSEYLPIIYQINGKNDMSWHELHATLITFENTLQYMS- 240
           +L LAGE ++ + L+S VL+GL++EYLPI+ QI GK+  SW EL ATL+TFENTL  ++ 
Sbjct: 181 SLKLAGEPVAFNYLMSCVLSGLEAEYLPIVCQIEGKDSTSWQELFATLVTFENTLMRLNI 240

Query: 241 -SMQSGGEMVNLTANYASKKQ---GANEHHKSQT 269
            S  +   + + + NY   KQ   G  + H+SQ+
Sbjct: 241 VSTATAEGISDGSXNYVHSKQNSVGNRQFHQSQS 274

BLAST of Lcy09g016670 vs. NCBI nr
Match: TXG48382.1 (hypothetical protein EZV62_027676 [Acer yangbiense])

HSP 1 Score: 199.1 bits (505), Expect = 5.0e-47
Identity = 108/255 (42.35%), Postives = 159/255 (62.35%), Query Frame = 0

Query: 17  TTQQIVIPTITNTHFSSFSNPLNSTLGVNLDENNVLLWKSMVIAVLRGQRLDGYIQGTKT 76
           T+ + V+   T++      NPL S   V L+  N LLWK++V+ V+RG R++GYI G K 
Sbjct: 150 TSPESVVRKETSSSEKKVGNPLGSYCSVKLNHENYLLWKNLVLPVIRGNRMEGYITGAKK 209

Query: 77  CPPEFIRVS-DADGETILEANKEFENWVTMDQALLGWLYSTMTPTVASEVINIKTSRGVW 136
           CPPEFI    + + +  LE N E+E+W+  DQ LLGWLY++M P VASEVI  +TS+ +W
Sbjct: 210 CPPEFIITDLEQEADETLEENPEYEDWIVHDQILLGWLYNSMEPDVASEVIGSETSKDLW 269

Query: 137 KAIEELYGSTNKSRINQLKRALQTTRKNNTKMSEYLSTMKQIADNLSLAGESISVSSLIS 196
           ++I  L+G   KS I   KR  Q  +K   KMS+YL   K++ADNL+LAG  + +  L+S
Sbjct: 270 ESINTLFGLKTKSNIAYYKREFQKLQKGGMKMSDYLKAAKKLADNLALAGRPVPLEDLVS 329

Query: 197 SVLTGLDS-EYLPIIYQINGKNDMSWHELHATLITFENTLQYMSSMQSGGEMVNLTANYA 256
            VL GLDS EY P++ QIN + D+SW +L A L+++E  L+ +++  S   +  ++ANY 
Sbjct: 330 QVLDGLDSVEYNPLVCQINEREDISWIDLQAKLLSYEKRLEKINAGFSSINLGQVSANYV 389

Query: 257 SKKQ--GANEHHKSQ 268
             K   G    ++SQ
Sbjct: 390 GTKNTGGQTGQNRSQ 404

BLAST of Lcy09g016670 vs. NCBI nr
Match: QWX09785.1 (hydroxymethylglutaryl-CoA synthase [Pistacia terebinthus subsp. palaestina])

HSP 1 Score: 195.3 bits (495), Expect = 7.2e-46
Identity = 97/207 (46.86%), Postives = 141/207 (68.12%), Query Frame = 0

Query: 44  VNLDENNVLLWKSMVIAVLRGQRLDGYIQGTKTCPPEFIRVSDADGETILEANKEFENWV 103
           + LD  N LLW+++V+ V+RG +  GYI GTK CPPE++      G T+   N ++E+W+
Sbjct: 39  IKLDRTNHLLWETLVLPVIRGHKSAGYIFGTKPCPPEYL-PRTTPGSTVQIPNSDYEDWI 98

Query: 104 TMDQALLGWLYSTMTPTVASEVINIKTSRGVWKAIEELYGSTNKSRINQLKRALQTTRKN 163
           + D+ LLGWLYSTM P +AS+++   TS+ +W A +EL G+  KSR+   K  LQ TRK 
Sbjct: 99  SNDKLLLGWLYSTMNPDIASQLMQKLTSKELWDAAKELSGAHTKSRVIFYKGELQKTRKG 158

Query: 164 NTKMSEYLSTMKQIADNLSLAGESISVSSLISSVLTGLDSEYLPIIYQINGKNDMSWHEL 223
             KM EYL+TMK  +DNL+LAG  IS+S LI+ +L GLD+EY PI+  +  K  +SW EL
Sbjct: 159 RMKMEEYLTTMKAFSDNLTLAGSPISLSDLITQILIGLDAEYTPIVVHLGDKESLSWIEL 218

Query: 224 HATLITFENTLQYMSSMQSGGEMVNLT 251
             TL+TFE+ L+ +++ Q+GG  +NL+
Sbjct: 219 QTTLLTFESRLEQLNTYQNGG--INLS 242

BLAST of Lcy09g016670 vs. NCBI nr
Match: XP_030492910.1 (uncharacterized protein LOC115709020 isoform X2 [Cannabis sativa])

HSP 1 Score: 188.7 bits (478), Expect = 6.7e-44
Identity = 104/282 (36.88%), Postives = 170/282 (60.28%), Query Frame = 0

Query: 2   AANASSSNTSAVNVITTQQIVIPTITNTHFSSFSNPLNSTLGVNLDENNVLLWKSMVIAV 61
           AAN S +  S+   +T+      +    +F+   + LN    + LD NN  LWK+MV  +
Sbjct: 15  AANNSPAPGSSQAGVTSNTAQAQSSYVANFTQPFSTLNQPFPLKLDRNNYSLWKTMVSTI 74

Query: 62  LRGQRLDGYIQGTKTCPPEFIRVSDADGETI--LEANKEFENWVTMDQALLGWLYSTMTP 121
           +RG RLDG++QGT+ CPPEF+     +G+    ++ N  +E+WV  DQ L+GWLYS+MT 
Sbjct: 75  IRGHRLDGFVQGTRACPPEFVPAEAPEGQVSFGVQLNPHYEHWVVSDQLLMGWLYSSMTE 134

Query: 122 TVASEVINIKTSRGVWKAIEELYGSTNKSRINQLKRALQTTRKNNTKMSEYLSTMKQIAD 181
            +A+EV+   T+  +WKA+E LYG+ +KS+++  + A+QTTRK NT M +YL   K  +D
Sbjct: 135 AIATEVMGCTTAAALWKALENLYGAHSKSKMDDTRTAIQTTRKGNTSMVDYLRQKKAWSD 194

Query: 182 NLSLAGESISVSSLISSVLTGLDSEYLPIIYQINGKNDMSWHELHATLITFENTLQYMSS 241
            L+LAG+    + LIS+VL+GLD+ YLPI+ QI  +   +W EL   L++F++ ++ + +
Sbjct: 195 VLTLAGDPYPEAHLISNVLSGLDASYLPIVLQIEARPSTTWQELQELLLSFDSKIERLHN 254

Query: 242 M-QSGGEMVNLTANYASKKQGANEHHKSQTPYQMTKSRKKKS 281
           + +S       TAN A++ + ++    + + +    SR   S
Sbjct: 255 LNESSKHAAAPTANMANRYENSSRGRGNNSTHSPNPSRTNYS 296

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DU779.7e-5744.53uncharacterized protein LOC111024384 isoform X1 OS=Momordica charantia OX=3673 G... [more]
A0A6J1DTZ79.7e-5744.53uncharacterized protein LOC111024384 isoform X2 OS=Momordica charantia OX=3673 G... [more]
A0A5C7GVK12.4e-4742.35Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_027676 PE=4 SV=1[more]
A0A5C7HRI64.2e-4438.24Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_014244 PE=4 SV=1[more]
A0A803R2Q24.2e-4438.78Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
XP_022157748.12.0e-5644.53uncharacterized protein LOC111024384 isoform X1 [Momordica charantia][more]
XP_022157750.12.0e-5644.53uncharacterized protein LOC111024384 isoform X2 [Momordica charantia][more]
TXG48382.15.0e-4742.35hypothetical protein EZV62_027676 [Acer yangbiense][more]
QWX09785.17.2e-4646.86hydroxymethylglutaryl-CoA synthase [Pistacia terebinthus subsp. palaestina][more]
XP_030492910.16.7e-4436.88uncharacterized protein LOC115709020 isoform X2 [Cannabis sativa][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 102..232
e-value: 2.9E-14
score: 53.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 256..281
NoneNo IPR availablePANTHERPTHR34222FAMILY NOT NAMEDcoord: 48..265
NoneNo IPR availablePANTHERPTHR34222:SF48SUBFAMILY NOT NAMEDcoord: 48..265

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy09g016670.1Lcy09g016670.1mRNA