Lcy09g016420 (gene) Sponge gourd (P93075) v1

Overview
NameLcy09g016420
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionZinc finger BED domain-containing protein RICESLEEPER 3-like
LocationChr09: 29047630 .. 29051066 (+)
RNA-Seq ExpressionLcy09g016420
SyntenyLcy09g016420
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATACTATCCCGGAAGAAAGTTCAGTCCATGTTGTGGATGTGGAGAAATCAAGTGGAGCTAAGAAAAGTAAAGTGGGTCATTCGAGTCCAACCAAAAAGCGTAAGAATACTAAAATCTCTGTTGTTTGGGATCATTTTGAGAAAATTAAAGATTGTGATCCTAATGATCCCTATGCTAAATGTAAATATTGTGGGGCTAAGTATGCATGTCATTCCAAGCGTAATGGTACCGGTAGTTTGAAGCACCATTTAGAGAACTGTAAGAAATGCCCTTATCAAAGAATGAAAGATCCAGGACAAAAACAATTGGTTTTCAAGCCTAAAGAAGTGATTGATAATTCTGAATCAAAACTTAGTTGTGATACTTTTAGTCTGGAAAGTTGTAGAAGAGCTCTTGCTGAGATGATTATTCTAGATGAATTGCCTTTTAGGTTTGTGGAGAACATAGGTTTTCGAAGATTCATCAACAAATCAATAGCCTTGTTTTTAAAACCATGTTTGGGTACGAATGAAACTGACGGTCTCTGATGTGGAATTTTCTTACCGCAAGCGCACGGGTCAAGTTATAATAAAGTGATTGAAAAATCGAGTGTCGTCCTCTGGATTGGATTTTTAAGTTAAATCAATTACAATGAATAATCTTACTCAATTTTATTTAGGACCGAAAAGTAGTGATTGATAGAAAACAAGATCAATGCAAATAAACTATGGAGATTCAATTGAAAGAACACTTAGGGAATTGATTTCGCCGATTTAGTCAAGGATTAATTTTAGGGAATGAGTTATAACGCACAATGGATTTATGAGCCTAAGAACTTTTAATCACAACTACCTCTCCCGAGCATAATTGATTCTCATGCAAATTAACCAACTTGATATCCCTATCTAAGTTTATTAACATGCATGGCATTTAGTTCTTTTTGACCAATTCTAAAGTTACTCTAAAATCTATCACGAGCTTAGAACATAAACTTTAGTCATGCAATCTTAATAAAGTCTACGCTAAATCTCCTCTCCCGAGCAAGACTCACCACTTAGATCATTCAACTAGTGGCCAATTAATTGAAAGCATTAAATTAAGATTGCATACATAAAAACCATTGCACAAATCATCCCATAAATCAATCCATAAGCTAAAAAGACTACATCAATCCCTAAGTAACAAGCTTAGCTACTCATACATGGCGTTACAAGATCAACTAAGCATGAAAAAGCCATTAAATCTAACTAAAGAAAAGGGAAAGGAAAGGAAACACTCAAAGTCGTCGAAACCGGCACGTCCCCGTTACGATCTCCACACCTCCAAGTTAGATTCCCACTCCTTGTCCTTGCTTCAGCTCCCACAGAAGGTCTCTAGTCGAAATTAGGGCTAAAATCTCTCAAATTGGACTCCCCTTGGTCGTAGCATGAAAAGATGATTAAATAGGAAATCTGTCGATAGCGTCGCGACGCTATGGACCTAGCGTCGCGACGCTATGCCCTGCAGCCAAATTTAGAAAAGGAAAGGCAGCGTCGAGACGCTCCAAGAGCAGCGTCCCGATGCTGGTCTGCGGATGGCTCTCTTTTGGCTTCTTCTAACTTGAATCTTTTCGGTTCTTTGGCATCTTTTCACATCCCGAACACCCGGTTAACTCCAATTTCACGCTTTAGCTCTAATCAACAATTTCCTACAAAATAAACATTTAATTGCAATAAAATGACCAATAAATCATAAAAGACTAGCTAAATTAATTAGGGAAAACTAACTAGCTATGCTCGCTATCAGTCTCCACGCTCCTTCAAATCTGGGTTTTTAAAACCATGTTTAAAAAAAAAAAAAAAGAGAAAGAAAGGTTGGAGAAAAAGGGAAAAATAAGAAGAAAAGAAGAGAATGAAAAAAAAAAAAGTTCGCCGGCCGTCAGCCACCGCCCATCTACAAAAGAAGGAAGAAGAAGAAGGGGAGGGGAAGGAGAGAAAAGAAATAATAAAAAATAATAGTATTTTTATTAATTTAATATAATTTTATTTAAAAAAAATAATAATATATATTTGTTTAAATAAAAAAGAGGTGCCACGTCAGCAATCTGTTAGTATTTAACGGAAAAATGGATGGAGGGACTAAAATGAAACTAAAACCAAACCTCAGGGACTAAATTGTTGAGTTTAAAAACTCAGGGACCAAAATGAAACCTAATCCAAACCTTAGGGACCAAAAGTGTATTTTTCCCTAAAATAAATTTAATTGCCCACCAATTTTTATCATCATCCATTTTTAATTATTCAATGGGAAAGAAAATTAAAAGTAGAAGGAAATGAATATTAAGGTCCCGTTTGATAACCATTTCAGTTTTTGGTTTTTCTATTTTTAGTCTTTTGTTTTTGGTTTTTGGTTTTCTGTTTTTTAAGAACAAAAATCATATATGTTTGATAACTATTTTTGGTTTTCAATTTTTAAAAAATTAGAGAGATGAAAAGATGTTTTAGAGAGAGAAAGATGTATAGGGACATTAAAACAAAAATTTAGAGACACAAATATAAATATTTTCGAGAGAAAAGTTAAACATAGAAAAGTTAGAGACGTGAAAGAAAATGTTAGAGAGAGAATATTAGTTAGACTTCATAAAAGATATTAGTTATAGAAAAAAGAAAAAAAGTTAGGGTAGAAGAGATAAATTTTAGATAGAAAAATTAAATAAAAAGAGAAATTTTAGAGAGATAGCAAGGTTAAGAGTAAAAGGTATGCTAGAAAAAATAACGATAAATTAGAAAAATAAAGAAAAGGTGTAGCGAGAGAAAATGTAACGCCCCGCGTTTCAGAATTAAGCCTTTTTGGAGTAACCGAGTCTATTCACTCAAGTTCTAATTTGGAAAATTAGACAAGTTCATTTAGTTCCAAAATCGATGAGTTAAATCTCGATAATTTAGGAATTTAGTTCTTTGTTGTATCTCTAATTTTCTCTAGAAATCCAAATCGCAATTTTAATTTAGGATTTACCCAATTATTCAAAGTTTTAATTGGGTTTAAAATTGGGACAAGAAATTTAATGTGGAATTCAAATTAAGGCTTTTTTTTTTTATTTTTATTTTTGGCTATTCATTCTTAGAAGAAAAGGAAAAGATGGTTTAAAAAAAAAGAGAAAAGAAAATAGTGGCAACCCTAAAATCTGATCTCCTTCCCTCATCTCCTTCTATCCACGTCGCCACCCCCCTCGAGTTCTCCTTCAGCCGTTGACAGCCCCCCTTCCCTCTCTCATTCTCTCGTGTTCTGCCTCCACAGGGACCGCTCGCAGCCGCTGCCTCCTCCATCCTTCCGTTCTTCCTCTGGCGAGCACCCACGCACGCGAGCAGCAAGTTTGACAAAGGTCTATCTCGCTCTCTTGCGTTTCTCCCTCTTCAAGCAGCAAACTGACGACACACCCACGCTAGCGACGCGATTCCTCCCCTCTTCCTTGTAG

mRNA sequence

ATGGATACTATCCCGGAAGAAAGTTCAGTCCATGTTGTGGATGTGGAGAAATCAAGTGGAGCTAAGAAAAGTAAAGTGGGTCATTCGAGTCCAACCAAAAAGCGTAAGAATACTAAAATCTCTGTTGTTTGGGATCATTTTGAGAAAATTAAAGATTGTGATCCTAATGATCCCTATGCTAAATGTAAATATTGTGGGGCTAAGTATGCATGTCATTCCAAGCGTAATGGTACCGGTAGTTTGAAGCACCATTTAGAGAACTGTAAGAAATGCCCTTATCAAAGAATGAAAGATCCAGGACAAAAACAATTGGTTTTCAAGCCTAAAGAAGTGATTGATAATTCTGAATCAAAACTTAGTTGTGATACTTTTAGTCTGGAAAGTTGTAGAAGAGCTCTTGCTGAGATGATTATTCTAGATGAATTGCCTTTTAGGGACCGCTCGCAGCCGCTGCCTCCTCCATCCTTCCGTTCTTCCTCTGGCGAGCACCCACGCACGCGAGCAGCAAGTTTGACAAAGGTCTATCTCGCTCTCTTGCGTTTCTCCCTCTTCAAGCAGCAAACTGACGACACACCCACGCTAGCGACGCGATTCCTCCCCTCTTCCTTGTAG

Coding sequence (CDS)

ATGGATACTATCCCGGAAGAAAGTTCAGTCCATGTTGTGGATGTGGAGAAATCAAGTGGAGCTAAGAAAAGTAAAGTGGGTCATTCGAGTCCAACCAAAAAGCGTAAGAATACTAAAATCTCTGTTGTTTGGGATCATTTTGAGAAAATTAAAGATTGTGATCCTAATGATCCCTATGCTAAATGTAAATATTGTGGGGCTAAGTATGCATGTCATTCCAAGCGTAATGGTACCGGTAGTTTGAAGCACCATTTAGAGAACTGTAAGAAATGCCCTTATCAAAGAATGAAAGATCCAGGACAAAAACAATTGGTTTTCAAGCCTAAAGAAGTGATTGATAATTCTGAATCAAAACTTAGTTGTGATACTTTTAGTCTGGAAAGTTGTAGAAGAGCTCTTGCTGAGATGATTATTCTAGATGAATTGCCTTTTAGGGACCGCTCGCAGCCGCTGCCTCCTCCATCCTTCCGTTCTTCCTCTGGCGAGCACCCACGCACGCGAGCAGCAAGTTTGACAAAGGTCTATCTCGCTCTCTTGCGTTTCTCCCTCTTCAAGCAGCAAACTGACGACACACCCACGCTAGCGACGCGATTCCTCCCCTCTTCCTTGTAG

Protein sequence

MDTIPEESSVHVVDVEKSSGAKKSKVGHSSPTKKRKNTKISVVWDHFEKIKDCDPNDPYAKCKYCGAKYACHSKRNGTGSLKHHLENCKKCPYQRMKDPGQKQLVFKPKEVIDNSESKLSCDTFSLESCRRALAEMIILDELPFRDRSQPLPPPSFRSSSGEHPRTRAASLTKVYLALLRFSLFKQQTDDTPTLATRFLPSSL
Homology
[Close]
BLAST of Lcy09g016420 vs. ExPASy TrEMBL
Match: A0A5D3DUE1 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold478G00140 PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 3.3e-38
Identity = 75/117 (64.10%), Postives = 96/117 (82.05%), Query Frame = 0 

Query: 29  SSPTKKRKNTKISVVWDHFEKIKDCDPNDPYAKCKYCGAKYACHSKRNGTGSLKHHLENC 88
           S+P+K RKN K S+VW+HFE++K CDPNDP AKCKYCG  YACHSKRNGTG++KHHLENC
Sbjct: 43  SNPSKIRKNVKQSMVWNHFERLK-CDPNDPLAKCKYCGVVYACHSKRNGTGTMKHHLENC 102

Query: 89  KKCPYQRMKDPGQKQLVFKPKEVIDNSESKLSCDTFSLESCRRALAEMIILDELPFR 146
           KK PYQ+ ++  Q  L FKPK+ + ++ S+L C++FSLE CR+A  EMII+DELPF+
Sbjct: 103 KKYPYQKKRNQTQMTLAFKPKDKVGDNSSQLLCESFSLEGCRKAWVEMIIVDELPFK 158

[Close]
BLAST of Lcy09g016420 vs. ExPASy TrEMBL
Match: A0A5A7URG0 (Zinc finger BED domain-containing protein RICESLEEPER 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold970G00400 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 2.8e-37
Identity = 75/116 (64.66%), Postives = 92/116 (79.31%), Query Frame = 0 

Query: 30  SPTKKRKNTKISVVWDHFEKIKDCDPNDPYAKCKYCGAKYACHSKRNGTGSLKHHLENCK 89
           +P K RKN K S+VWDHFE++K  DPNDP AKCKYCG  YACHSK NGTG++KHHLENCK
Sbjct: 46  NPPKIRKNVKQSMVWDHFERLKG-DPNDPRAKCKYCGVVYACHSKHNGTGTMKHHLENCK 105

Query: 90  KCPYQRMKDPGQKQLVFKPKEVIDNSESKLSCDTFSLESCRRALAEMIILDELPFR 146
           K PYQ+ +D  Q  L FKPK+ + ++ S+L C++FSLE CR AL EMII+DELPF+
Sbjct: 106 KYPYQKKRDQTQMTLAFKPKDKVGDNSSQLVCESFSLEGCREALVEMIIVDELPFK 160

[Close]
BLAST of Lcy09g016420 vs. ExPASy TrEMBL
Match: A0A5D3CEC4 (Zinc finger BED domain-containing protein RICESLEEPER 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold447G001000 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 2.8e-37
Identity = 75/116 (64.66%), Postives = 93/116 (80.17%), Query Frame = 0 

Query: 30  SPTKKRKNTKISVVWDHFEKIKDCDPNDPYAKCKYCGAKYACHSKRNGTGSLKHHLENCK 89
           +P K RKN K S+VWDHFE++K  DPNDP AKCKYCG  YACHSKRNGTG++KHHLENCK
Sbjct: 46  NPPKIRKNVKQSMVWDHFERLKG-DPNDPRAKCKYCGVVYACHSKRNGTGTMKHHLENCK 105

Query: 90  KCPYQRMKDPGQKQLVFKPKEVIDNSESKLSCDTFSLESCRRALAEMIILDELPFR 146
           K PYQ+ +D  Q  L FKPK+ + ++ S+L C++FSL+ CR AL EMII+DELPF+
Sbjct: 106 KYPYQKKRDQTQMTLAFKPKDKVGDNSSQLVCESFSLDGCRDALVEMIIVDELPFK 160

[Close]
BLAST of Lcy09g016420 vs. ExPASy TrEMBL
Match: A0A5D3CR68 (Zinc finger BED domain-containing protein RICESLEEPER 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G001050 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 2.8e-37
Identity = 75/116 (64.66%), Postives = 93/116 (80.17%), Query Frame = 0 

Query: 30  SPTKKRKNTKISVVWDHFEKIKDCDPNDPYAKCKYCGAKYACHSKRNGTGSLKHHLENCK 89
           +P K RKN K S+VWDHFE++K  DPNDP AKCKYCG  YACHSKRNGTG++KHHLENCK
Sbjct: 46  NPPKIRKNVKQSMVWDHFERLKG-DPNDPRAKCKYCGVVYACHSKRNGTGTMKHHLENCK 105

Query: 90  KCPYQRMKDPGQKQLVFKPKEVIDNSESKLSCDTFSLESCRRALAEMIILDELPFR 146
           K PYQ+ +D  Q  L FKPK+ + ++ S+L C++FSL+ CR AL EMII+DELPF+
Sbjct: 106 KYPYQKKRDQTQMTLAFKPKDKVGDNSSQLVCESFSLDGCRDALVEMIIVDELPFK 160

[Close]
BLAST of Lcy09g016420 vs. ExPASy TrEMBL
Match: A0A5A7THT5 (Zinc finger BED domain-containing protein RICESLEEPER 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold125G001530 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 2.8e-37
Identity = 75/116 (64.66%), Postives = 93/116 (80.17%), Query Frame = 0 

Query: 30  SPTKKRKNTKISVVWDHFEKIKDCDPNDPYAKCKYCGAKYACHSKRNGTGSLKHHLENCK 89
           +P K RKN K S+VWDHFE++K  DPNDP AKCKYCG  YACHSKRNGTG++KHHLENCK
Sbjct: 46  NPPKIRKNVKQSMVWDHFERLKG-DPNDPRAKCKYCGVVYACHSKRNGTGTMKHHLENCK 105

Query: 90  KCPYQRMKDPGQKQLVFKPKEVIDNSESKLSCDTFSLESCRRALAEMIILDELPFR 146
           K PYQ+ +D  Q  L FKPK+ + ++ S+L C++FSL+ CR AL EMII+DELPF+
Sbjct: 106 KYPYQKKRDQTQMTLAFKPKDKVGDNSSQLVCESFSLDGCRDALVEMIIVDELPFK 160

[Close]
BLAST of Lcy09g016420 vs. NCBI nr
Match: TYK27122.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 168.3 bits (425), Expect = 6.8e-38
Identity = 75/117 (64.10%), Postives = 96/117 (82.05%), Query Frame = 0 

Query: 29  SSPTKKRKNTKISVVWDHFEKIKDCDPNDPYAKCKYCGAKYACHSKRNGTGSLKHHLENC 88
           S+P+K RKN K S+VW+HFE++K CDPNDP AKCKYCG  YACHSKRNGTG++KHHLENC
Sbjct: 43  SNPSKIRKNVKQSMVWNHFERLK-CDPNDPLAKCKYCGVVYACHSKRNGTGTMKHHLENC 102

Query: 89  KKCPYQRMKDPGQKQLVFKPKEVIDNSESKLSCDTFSLESCRRALAEMIILDELPFR 146
           KK PYQ+ ++  Q  L FKPK+ + ++ S+L C++FSLE CR+A  EMII+DELPF+
Sbjct: 103 KKYPYQKKRNQTQMTLAFKPKDKVGDNSSQLLCESFSLEGCRKAWVEMIIVDELPFK 158

[Close]
BLAST of Lcy09g016420 vs. NCBI nr
Match: KAA0057700.1 (zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa] >TYK27486.1 zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 165.2 bits (417), Expect = 5.7e-37
Identity = 75/116 (64.66%), Postives = 92/116 (79.31%), Query Frame = 0 

Query: 30  SPTKKRKNTKISVVWDHFEKIKDCDPNDPYAKCKYCGAKYACHSKRNGTGSLKHHLENCK 89
           +P K RKN K S+VWDHFE++K  DPNDP AKCKYCG  YACHSK NGTG++KHHLENCK
Sbjct: 46  NPPKIRKNVKQSMVWDHFERLKG-DPNDPRAKCKYCGVVYACHSKHNGTGTMKHHLENCK 105

Query: 90  KCPYQRMKDPGQKQLVFKPKEVIDNSESKLSCDTFSLESCRRALAEMIILDELPFR 146
           K PYQ+ +D  Q  L FKPK+ + ++ S+L C++FSLE CR AL EMII+DELPF+
Sbjct: 106 KYPYQKKRDQTQMTLAFKPKDKVGDNSSQLVCESFSLEGCREALVEMIIVDELPFK 160

[Close]
BLAST of Lcy09g016420 vs. NCBI nr
Match: KAA0033275.1 (zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 165.2 bits (417), Expect = 5.7e-37
Identity = 75/116 (64.66%), Postives = 93/116 (80.17%), Query Frame = 0 

Query: 30  SPTKKRKNTKISVVWDHFEKIKDCDPNDPYAKCKYCGAKYACHSKRNGTGSLKHHLENCK 89
           +P K RKN K S+VWDHFE++K  DPNDP AKCKYCG  YACHSKRNGTG++KHHLENCK
Sbjct: 46  NPPKIRKNVKQSMVWDHFERLKG-DPNDPRAKCKYCGVVYACHSKRNGTGTMKHHLENCK 105

Query: 90  KCPYQRMKDPGQKQLVFKPKEVIDNSESKLSCDTFSLESCRRALAEMIILDELPFR 146
           K PYQ+ +D  Q  L FKPK+ + ++ S+L C++FSL+ CR AL EMII+DELPF+
Sbjct: 106 KYPYQKKRDQTQMTLAFKPKDKVGDNSSQLVCESFSLDGCRDALVEMIIVDELPFK 160

[Close]
BLAST of Lcy09g016420 vs. NCBI nr
Match: KAA0040955.1 (zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 165.2 bits (417), Expect = 5.7e-37
Identity = 75/116 (64.66%), Postives = 93/116 (80.17%), Query Frame = 0 

Query: 30  SPTKKRKNTKISVVWDHFEKIKDCDPNDPYAKCKYCGAKYACHSKRNGTGSLKHHLENCK 89
           +P K RKN K S+VWDHFE++K  DPNDP AKCKYCG  YACHSKRNGTG++KHHLENCK
Sbjct: 46  NPPKIRKNVKQSMVWDHFERLKG-DPNDPRAKCKYCGVVYACHSKRNGTGTMKHHLENCK 105

Query: 90  KCPYQRMKDPGQKQLVFKPKEVIDNSESKLSCDTFSLESCRRALAEMIILDELPFR 146
           K PYQ+ +D  Q  L FKPK+ + ++ S+L C++FSL+ CR AL EMII+DELPF+
Sbjct: 106 KYPYQKKRDQTQMTLAFKPKDKVGDNSSQLVCESFSLDGCRDALVEMIIVDELPFK 160

[Close]
BLAST of Lcy09g016420 vs. NCBI nr
Match: TYK14363.1 (zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 165.2 bits (417), Expect = 5.7e-37
Identity = 75/116 (64.66%), Postives = 93/116 (80.17%), Query Frame = 0 

Query: 30  SPTKKRKNTKISVVWDHFEKIKDCDPNDPYAKCKYCGAKYACHSKRNGTGSLKHHLENCK 89
           +P K RKN K S+VWDHFE++K  DPNDP AKCKYCG  YACHSKRNGTG++KHHLENCK
Sbjct: 46  NPPKIRKNVKQSMVWDHFERLKG-DPNDPRAKCKYCGVVYACHSKRNGTGTMKHHLENCK 105

Query: 90  KCPYQRMKDPGQKQLVFKPKEVIDNSESKLSCDTFSLESCRRALAEMIILDELPFR 146
           K PYQ+ +D  Q  L FKPK+ + ++ S+L C++FSL+ CR AL EMII+DELPF+
Sbjct: 106 KYPYQKKRDQTQMTLAFKPKDKVGDNSSQLVCESFSLDGCRDALVEMIIVDELPFK 160

The following BLAST results are available for this feature:
BLAST of Lcy09g016420 vs.
Match NameE-valueIdentityDescription
BLAST of Lcy09g016420 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3DUE13.3e-3864.10Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold478G00140 PE... [more]
A0A5A7URG02.8e-3764.66Zinc finger BED domain-containing protein RICESLEEPER 3-like OS=Cucumis melo var... [more]
A0A5D3CEC42.8e-3764.66Zinc finger BED domain-containing protein RICESLEEPER 3-like OS=Cucumis melo var... [more]
A0A5D3CR682.8e-3764.66Zinc finger BED domain-containing protein RICESLEEPER 3-like OS=Cucumis melo var... [more]
A0A5A7THT52.8e-3764.66Zinc finger BED domain-containing protein RICESLEEPER 3-like OS=Cucumis melo var... [more]
BLAST of Lcy09g016420 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK27122.16.8e-3864.10transposase [Cucumis melo var. makuwa][more]
KAA0057700.15.7e-3764.66zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. ... [more]
KAA0033275.15.7e-3764.66zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. ... [more]
KAA0040955.15.7e-3764.66zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. ... [more]
TYK14363.15.7e-3764.66zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. ... [more]
BLAST of Lcy09g016420 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00614bed5coord: 38..91
e-value: 1.4E-12
score: 57.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..37
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 145..165
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 7..23
NoneNo IPR availablePANTHERPTHR34396OS03G0264950 PROTEIN-RELATEDcoord: 9..145
NoneNo IPR availablePANTHERPTHR34396:SF1OS03G0264950 PROTEINcoord: 9..145
IPR003656Zinc finger, BED-typePFAMPF02892zf-BEDcoord: 41..87
e-value: 3.2E-6
score: 27.0
IPR003656Zinc finger, BED-typePROSITEPS50808ZF_BEDcoord: 38..98
score: 10.543829
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 41..96

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy09g016420.1Lcy09g016420.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009791 post-embryonic development
cellular_component GO:0005634 nucleus
molecular_function GO:0005524 ATP binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0046983 protein dimerization activity