Lcy09g016210 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTATGTTTATATTTTCCCTAACTTTCAGTTTGTCATATTTATTGAGCATTTTTTTTTGTTTAAGTTATAGAGAGATTTTCCGAGTTCAATTTCTCAAGTAGTTATTTTTATATTTGTGTTAAATTTCACAAATGGGTACCGTTTCATTTTTCAGTTTTGACACCACAATTTCTATTAAGTTATAGAGATATGTATTATATCGTATTCTATTACATTTTTAAGTTATACAATGGTATATTATTTATATTTTTCATGTATTTACCAGGCTTTTGTTTTATTTAATATACCTTATATTTTCACTTACTAGGTTCCGACGTTATTCCTGTACGCATGCTATTTGGTGGCAATTGGAATGAGAGGAACAATTATGTTGGCTAAAGCATTTCTGAAATTATGATGCAACCGAGAATGTCATTCCAGAATTTGATGGACACTGTAATGTTACAGTTAGGAATTTCAGGTAATTATGATTGTCTGGATCTATTTGCTAGCATAGGGCCACAATCTTTCATAGAAAAGGGTATGAAATTGGGGGATGATCGAGATGTAAGCTGGTTTTTTAACACAATGTCCAATGGTTCATCCAATTGTTGTTCGTTAGTAGTAGATTATAGATTGGATAACATGCTTCTCCAAGATTCTAGCACCAGTTCCTTACAAACTCAAGGTCGATTTCATCAAAATATTGATGATGCAAAAATTAAGGACAATTTTCACATAAACGTAGATGACATGTTTAGTGGGAAGATTAATTTACAGAATGCATCGCGTTCCATTGCATTGAGGGACAACTTTCAGTACAAAATTGTAAAATCCAATCAGGAGAAGTTGGTTGTCAGATGTGTTGTCGAAAATTGCAGTTGGGTTATTCGTGCATGTCGATACGGGGATGAAAAAAAGTGAAACATGGATTGTCAAGAATTTAGTTAGTGATTATAGATGCTCTCTAGACGTCGTATTGAATGATCATAAACAAGCAACAACCTCTGTGATTAAAGAATGTATCAAAAGCAAAATGTCCATCACTGGCAGTTAATTGAAAACTCCGAAGGATATTGTGGCGTATATTCGTTCAGAATTTGGCATCCACATTAGTTACCAAAAAGCATGGCGTGCTCGTGAAGCAGCTCTTAATGAAATTAGAGGATTACTTGTAGATTTTTATTCCAAGATCCCTTCATTCTGCCATATGCTGATGCTAAAAAATCTAGGTACTTTTTATATATACCGAAGTATGTGTTCTAATCTAGGTATTATACAACGGTTTAAATAAACACCCAGTATAAATCATATAACGTAGGCACTTTTTATATATACTATATTATATGTTCTAATTTAGGTATTTATATCATATATTTCAGGTACATTTTCTACATACAAACTCGACGTAGATGGAAGATTTTTGTACTTTTTTATGTCACTGTCTGCTTCAATTTCTGGATGGAAGCATTGTATACCTGTTATCTCGGTTGATGACACTTTCTTAAAGAATAAGTTCGTTGGTTATTTATTGACTGTTGTATCTATTAATGAAAATGACCAGATATTCGCATTGGGTTGTGCAATAGTTGATTCAGAGAACAACTTATCATGGGAATGGTTTTTTGTTCAACTAAAGGCGACCATTGGTGTGCGAGAAGATCTTGTTTTCGTGTCTGATAGACACAAGAGTATATTGAAAATCATTCCCAAGGTATTTCCTACTGCTTTTCATGGCGTTCGTATTGTTCACTTGTTGAGGAACTTGAGGTAA ATGGGTACATTTTCTACATACAAACTCGACGTAGATGGAAGATTTTTGTACTTTTTTATGTCACTGTCTGCTTCAATTTCTGGATGGAAGCATTGTATACCTGTTATCTCGGTTGATGACACTTTCTTAAAGAATAAGTTCGTTGGTTATTTATTGACTGTTGTATCTATTAATGAAAATGACCAGATATTCGCATTGGGTTGTGCAATAGTTGATTCAGAGAACAACTTATCATGGGAATGGTTTTTTGTTCAACTAAAGGCGACCATTGGTGTGCGAGAAGATCTTGTTTTCGTGTCTGATAGACACAAGAGTATATTGAAAATCATTCCCAAGGTATTTCCTACTGCTTTTCATGGCGTTCGTATTGTTCACTTGTTGAGGAACTTGAGGTAA ATGGGTACATTTTCTACATACAAACTCGACGTAGATGGAAGATTTTTGTACTTTTTTATGTCACTGTCTGCTTCAATTTCTGGATGGAAGCATTGTATACCTGTTATCTCGGTTGATGACACTTTCTTAAAGAATAAGTTCGTTGGTTATTTATTGACTGTTGTATCTATTAATGAAAATGACCAGATATTCGCATTGGGTTGTGCAATAGTTGATTCAGAGAACAACTTATCATGGGAATGGTTTTTTGTTCAACTAAAGGCGACCATTGGTGTGCGAGAAGATCTTGTTTTCGTGTCTGATAGACACAAGAGTATATTGAAAATCATTCCCAAGGTATTTCCTACTGCTTTTCATGGCGTTCGTATTGTTCACTTGTTGAGGAACTTGAGGTAA MGTFSTYKLDVDGRFLYFFMSLSASISGWKHCIPVISVDDTFLKNKFVGYLLTVVSINENDQIFALGCAIVDSENNLSWEWFFVQLKATIGVREDLVFVSDRHKSILKIIPKVFPTAFHGVRIVHLLRNLR Homology
BLAST of Lcy09g016210 vs. ExPASy Swiss-Prot
Match: Q9LIE5 (Protein FAR-RED ELONGATED HYPOCOTYL 3 OS=Arabidopsis thaliana OX=3702 GN=FHY3 PE=1 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 1.4e-07 Identity = 26/93 (27.96%), Postives = 51/93 (54.84%), Query Frame = 0
BLAST of Lcy09g016210 vs. ExPASy TrEMBL
Match: A0A1S3BFU6 (protein FAR1-RELATED SEQUENCE 3-like OS=Cucumis melo OX=3656 GN=LOC103489535 PE=4 SV=1) HSP 1 Score: 148.7 bits (374), Expect = 1.7e-32 Identity = 71/125 (56.80%), Postives = 91/125 (72.80%), Query Frame = 0
BLAST of Lcy09g016210 vs. ExPASy TrEMBL
Match: A0A6J1C328 (uncharacterized protein LOC111006994 OS=Momordica charantia OX=3673 GN=LOC111006994 PE=4 SV=1) HSP 1 Score: 144.8 bits (364), Expect = 2.5e-31 Identity = 71/130 (54.62%), Postives = 91/130 (70.00%), Query Frame = 0
BLAST of Lcy09g016210 vs. ExPASy TrEMBL
Match: A0A1S3B3X0 (protein FAR-RED ELONGATED HYPOCOTYL 3-like OS=Cucumis melo OX=3656 GN=LOC103485715 PE=4 SV=1) HSP 1 Score: 144.8 bits (364), Expect = 2.5e-31 Identity = 72/125 (57.60%), Postives = 85/125 (68.00%), Query Frame = 0
BLAST of Lcy09g016210 vs. ExPASy TrEMBL
Match: A0A4Q3EGF2 (FHY3/FAR1 family protein OS=Sphingobacteriaceae bacterium OX=2021370 GN=EOP45_14305 PE=4 SV=1) HSP 1 Score: 144.4 bits (363), Expect = 3.3e-31 Identity = 70/131 (53.44%), Postives = 92/131 (70.23%), Query Frame = 0
BLAST of Lcy09g016210 vs. ExPASy TrEMBL
Match: A0A5A7T3G5 (Protein FAR1-RELATED SEQUENCE 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold139G00710 PE=4 SV=1) HSP 1 Score: 144.1 bits (362), Expect = 4.3e-31 Identity = 69/130 (53.08%), Postives = 93/130 (71.54%), Query Frame = 0
BLAST of Lcy09g016210 vs. NCBI nr
Match: XP_024029591.1 (uncharacterized protein LOC112094003 [Morus notabilis]) HSP 1 Score: 151.0 bits (380), Expect = 7.2e-33 Identity = 76/129 (58.91%), Postives = 92/129 (71.32%), Query Frame = 0
BLAST of Lcy09g016210 vs. NCBI nr
Match: XP_024026050.1 (uncharacterized protein LOC112092942 [Morus notabilis]) HSP 1 Score: 150.2 bits (378), Expect = 1.2e-32 Identity = 77/129 (59.69%), Postives = 91/129 (70.54%), Query Frame = 0
BLAST of Lcy09g016210 vs. NCBI nr
Match: XP_008446991.1 (PREDICTED: protein FAR1-RELATED SEQUENCE 3-like [Cucumis melo]) HSP 1 Score: 148.7 bits (374), Expect = 3.6e-32 Identity = 71/125 (56.80%), Postives = 91/125 (72.80%), Query Frame = 0
BLAST of Lcy09g016210 vs. NCBI nr
Match: XP_019235171.1 (PREDICTED: uncharacterized protein LOC109215544 [Nicotiana attenuata]) HSP 1 Score: 147.1 bits (370), Expect = 1.0e-31 Identity = 67/130 (51.54%), Postives = 93/130 (71.54%), Query Frame = 0
BLAST of Lcy09g016210 vs. NCBI nr
Match: XP_022134813.1 (uncharacterized protein LOC111006994 [Momordica charantia]) HSP 1 Score: 144.8 bits (364), Expect = 5.2e-31 Identity = 71/130 (54.62%), Postives = 91/130 (70.00%), Query Frame = 0
BLAST of Lcy09g016210 vs. TAIR 10
Match: AT1G64260.1 (MuDR family transposase ) HSP 1 Score: 61.2 bits (147), Expect = 7.0e-10 Identity = 28/92 (30.43%), Postives = 49/92 (53.26%), Query Frame = 0
BLAST of Lcy09g016210 vs. TAIR 10
Match: AT1G49920.1 (MuDR family transposase ) HSP 1 Score: 57.4 bits (137), Expect = 1.0e-08 Identity = 34/121 (28.10%), Postives = 56/121 (46.28%), Query Frame = 0
BLAST of Lcy09g016210 vs. TAIR 10
Match: AT3G22170.1 (far-red elongated hypocotyls 3 ) HSP 1 Score: 57.4 bits (137), Expect = 1.0e-08 Identity = 26/93 (27.96%), Postives = 51/93 (54.84%), Query Frame = 0
BLAST of Lcy09g016210 vs. TAIR 10
Match: AT3G22170.2 (far-red elongated hypocotyls 3 ) HSP 1 Score: 57.4 bits (137), Expect = 1.0e-08 Identity = 26/93 (27.96%), Postives = 51/93 (54.84%), Query Frame = 0
BLAST of Lcy09g016210 vs. TAIR 10
Match: AT1G64255.1 (MuDR family transposase ) HSP 1 Score: 49.7 bits (117), Expect = 2.1e-06 Identity = 28/116 (24.14%), Postives = 52/116 (44.83%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
|