Lcy09g016190 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy09g016190
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	two-component response regulator ARR5-like
Location	Chr09: 27174756 .. 27174916 (+)
RNA-Seq Expression	Lcy09g016190
Synteny	Lcy09g016190

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGTTGAAGGAAGGGGTTGAAGAATTTGTAGTGATACCTGTGAAAATGTATGATGTGAAACGATTGAAAGATTTCATTATGAAAAGAGAAAATAAAGGGAGGAAAATTTGTCCCAAAAGGAAGCTCCATCTTGATCATGATCACCACCCCTTGTCTCCAAG

mRNA sequence

TTGTTGAAGGAAGGGGTTGAAGAATTTGTAGTGATACCTGTGAAAATGTATGATGTGAAACGATTGAAAGATTTCATTATGAAAAGAGAAAATAAAGGGAGGAAAATTTGTCCCAAAAGGAAGCTCCATCTTGATCATGATCACCACCCCTTGTCTCCAAG

Coding sequence (CDS)

TTGTTGAAGGAAGGGGTTGAAGAATTTGTAGTGATACCTGTGAAAATGTATGATGTGAAACGATTGAAAGATTTCATTATGAAAAGAGAAAATAAAGGGAGGAAAATTTGTCCCAAAAGGAAGCTCCATCTTGATCATGATCACCACCCCTTGTCTCCAAG

Protein sequence

LLKEGVEEFVVIPVKMYDVKRLKDFIMKRENKGRKICPKRKLHLDHDHHPLSP

Homology

[Close]

BLAST of Lcy09g016190 vs. ExPASy Swiss-Prot
Match: Q7G8V2 (Two-component response regulator ARR15 OS=Arabidopsis thaliana OX=3702 GN=ARR15 PE=1 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 7.8e-05
Identity = 27/53 (50.94%), Postives = 34/53 (64.15%), Query Frame = 0


Query: 4   EGVEEFVVIPVKMYDVKRLKDFIMK----RENKGRKICPKRKLHLDHDHHPLS 53
           EG EEF++ PVK+ DVKRLK+ IM+     E K +K+ PKR L  D D  P S
Sbjct: 123 EGAEEFLLKPVKLADVKRLKELIMRGGEAEEGKTKKLSPKRILQNDIDSSPSS 175

[Close]

BLAST of Lcy09g016190 vs. ExPASy Swiss-Prot
Match: Q9ZWS7 (Two-component response regulator ARR7 OS=Arabidopsis thaliana OX=3702 GN=ARR7 PE=1 SV=1)

HSP 1 Score: 43.9 bits (102), Expect = 6.6e-04
Identity = 26/49 (53.06%), Postives = 32/49 (65.31%), Query Frame = 0


Query: 2   LKEGVEEFVVIPVKMYDVKRLKDFIMKRENKGRKICP---KRKLHLDHD 48
           LKEG EEF++ PVK+ DVKR+K  IM+ E +  KI     KRKL  D D
Sbjct: 127 LKEGAEEFLLKPVKLADVKRIKQLIMRNEAEECKILSHSNKRKLQEDSD 175

[Close]

BLAST of Lcy09g016190 vs. ExPASy TrEMBL
Match: A0A1S3BWA3 (two-component response regulator ARR5-like OS=Cucumis melo OX=3656 GN=LOC103493944 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.4e-12
Identity = 40/52 (76.92%), Postives = 45/52 (86.54%), Query Frame = 0


Query: 2   LKEGVEEFVVIPVKMYDVKRLKDFIMKRENKGRKICPKRKLHLDHDHHPLSP 54
           LKEG EEF+V PVK+ DVKRLKDFIM+ EN G+KI  KRKLHLDHDH+PLSP
Sbjct: 135 LKEGAEEFIVKPVKLSDVKRLKDFIMEGENGGKKIDLKRKLHLDHDHNPLSP 186

[Close]

BLAST of Lcy09g016190 vs. ExPASy TrEMBL
Match: A0A0A0LNZ6 (Response regulatory domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G006300 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 5.2e-12
Identity = 39/52 (75.00%), Postives = 45/52 (86.54%), Query Frame = 0


Query: 2   LKEGVEEFVVIPVKMYDVKRLKDFIMKRENKGRKICPKRKLHLDHDHHPLSP 54
           LKEG EEF+V PVK+ DVKRLKDFIM+ EN G+KI  KRKLHL+HDH+PLSP
Sbjct: 134 LKEGAEEFIVKPVKLSDVKRLKDFIMEGENGGKKIDLKRKLHLNHDHNPLSP 185

[Close]

BLAST of Lcy09g016190 vs. ExPASy TrEMBL
Match: A0A5A7URW7 (Two-component response regulator ARR5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G002000 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 8.9e-12
Identity = 39/52 (75.00%), Postives = 44/52 (84.62%), Query Frame = 0


Query: 2   LKEGVEEFVVIPVKMYDVKRLKDFIMKRENKGRKICPKRKLHLDHDHHPLSP 54
           LKEG EEF+V PVK+ DVKRLKDFIM+ EN G+KI  KRKLH DHDH+PLSP
Sbjct: 135 LKEGAEEFIVKPVKLSDVKRLKDFIMEGENGGKKIDLKRKLHPDHDHNPLSP 186

[Close]

BLAST of Lcy09g016190 vs. ExPASy TrEMBL
Match: A0A5D3BK53 (Two-component response regulator ARR5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G002080 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 8.9e-12
Identity = 39/52 (75.00%), Postives = 44/52 (84.62%), Query Frame = 0


Query: 2   LKEGVEEFVVIPVKMYDVKRLKDFIMKRENKGRKICPKRKLHLDHDHHPLSP 54
           LKEG EEF+V PVK+ DVKRLKDFIM+ EN G+KI  KRKLH DHDH+PLSP
Sbjct: 135 LKEGAEEFIVKPVKLSDVKRLKDFIMEGENGGKKIDLKRKLHPDHDHNPLSP 186

[Close]

BLAST of Lcy09g016190 vs. ExPASy TrEMBL
Match: A0A6J1BYP0 (two-component response regulator ARR5-like OS=Momordica charantia OX=3673 GN=LOC111006948 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 7.1e-09
Identity = 38/55 (69.09%), Postives = 42/55 (76.36%), Query Frame = 0


Query: 2   LKEGVEEFVVIPVKMYDVKRLKDFIMKRENKGRKICPKRKLHLDHDH----HPLS 53
           LKEG EEF+V PVK+ DVKRLKDFIMK EN  ++I  KRKL LDHDH    HPLS
Sbjct: 100 LKEGAEEFLVKPVKLSDVKRLKDFIMKGENGEKRIGLKRKLDLDHDHDHDQHPLS 154

[Close]

BLAST of Lcy09g016190 vs. NCBI nr
Match: XP_008453146.1 (PREDICTED: two-component response regulator ARR5-like [Cucumis melo])

HSP 1 Score: 81.3 bits (199), Expect = 2.8e-12
Identity = 40/52 (76.92%), Postives = 45/52 (86.54%), Query Frame = 0


Query: 2   LKEGVEEFVVIPVKMYDVKRLKDFIMKRENKGRKICPKRKLHLDHDHHPLSP 54
           LKEG EEF+V PVK+ DVKRLKDFIM+ EN G+KI  KRKLHLDHDH+PLSP
Sbjct: 135 LKEGAEEFIVKPVKLSDVKRLKDFIMEGENGGKKIDLKRKLHLDHDHNPLSP 186

[Close]

BLAST of Lcy09g016190 vs. NCBI nr
Match: XP_004138134.1 (two-component response regulator ARR5 [Cucumis sativus])

HSP 1 Score: 79.3 bits (194), Expect = 1.1e-11
Identity = 39/52 (75.00%), Postives = 45/52 (86.54%), Query Frame = 0


Query: 2   LKEGVEEFVVIPVKMYDVKRLKDFIMKRENKGRKICPKRKLHLDHDHHPLSP 54
           LKEG EEF+V PVK+ DVKRLKDFIM+ EN G+KI  KRKLHL+HDH+PLSP
Sbjct: 134 LKEGAEEFIVKPVKLSDVKRLKDFIMEGENGGKKIDLKRKLHLNHDHNPLSP 185

[Close]

BLAST of Lcy09g016190 vs. NCBI nr
Match: KAE8652408.1 (hypothetical protein Csa_014096 [Cucumis sativus])

HSP 1 Score: 79.3 bits (194), Expect = 1.1e-11
Identity = 39/52 (75.00%), Postives = 45/52 (86.54%), Query Frame = 0


Query: 2   LKEGVEEFVVIPVKMYDVKRLKDFIMKRENKGRKICPKRKLHLDHDHHPLSP 54
           LKEG EEF+V PVK+ DVKRLKDFIM+ EN G+KI  KRKLHL+HDH+PLSP
Sbjct: 134 LKEGAEEFIVKPVKLSDVKRLKDFIMEGENGGKKIDLKRKLHLNHDHNPLSP 185

[Close]

BLAST of Lcy09g016190 vs. NCBI nr
Match: KAA0057900.1 (two-component response regulator ARR5-like [Cucumis melo var. makuwa])

HSP 1 Score: 78.6 bits (192), Expect = 1.8e-11
Identity = 39/52 (75.00%), Postives = 44/52 (84.62%), Query Frame = 0


Query: 2   LKEGVEEFVVIPVKMYDVKRLKDFIMKRENKGRKICPKRKLHLDHDHHPLSP 54
           LKEG EEF+V PVK+ DVKRLKDFIM+ EN G+KI  KRKLH DHDH+PLSP
Sbjct: 135 LKEGAEEFIVKPVKLSDVKRLKDFIMEGENGGKKIDLKRKLHPDHDHNPLSP 186

[Close]

BLAST of Lcy09g016190 vs. NCBI nr
Match: TYJ98588.1 (two-component response regulator ARR5-like [Cucumis melo var. makuwa])

HSP 1 Score: 78.6 bits (192), Expect = 1.8e-11
Identity = 39/52 (75.00%), Postives = 44/52 (84.62%), Query Frame = 0


Query: 2   LKEGVEEFVVIPVKMYDVKRLKDFIMKRENKGRKICPKRKLHLDHDHHPLSP 54
           LKEG EEF+V PVK+ DVKRLKDFIM+ EN G+KI  KRKLH DHDH+PLSP
Sbjct: 135 LKEGAEEFIVKPVKLSDVKRLKDFIMEGENGGKKIDLKRKLHPDHDHNPLSP 186

[Close]

BLAST of Lcy09g016190 vs. TAIR 10
Match: AT1G74890.1 (response regulator 15 )

HSP 1 Score: 47.0 bits (110), Expect = 5.5e-06
Identity = 27/53 (50.94%), Postives = 34/53 (64.15%), Query Frame = 0


Query: 4   EGVEEFVVIPVKMYDVKRLKDFIMK----RENKGRKICPKRKLHLDHDHHPLS 53
           EG EEF++ PVK+ DVKRLK+ IM+     E K +K+ PKR L  D D  P S
Sbjct: 123 EGAEEFLLKPVKLADVKRLKELIMRGGEAEEGKTKKLSPKRILQNDIDSSPSS 175

[Close]

BLAST of Lcy09g016190 vs. TAIR 10
Match: AT1G19050.1 (response regulator 7 )

HSP 1 Score: 43.9 bits (102), Expect = 4.7e-05
Identity = 26/49 (53.06%), Postives = 32/49 (65.31%), Query Frame = 0


Query: 2   LKEGVEEFVVIPVKMYDVKRLKDFIMKRENKGRKICP---KRKLHLDHD 48
           LKEG EEF++ PVK+ DVKR+K  IM+ E +  KI     KRKL  D D
Sbjct: 127 LKEGAEEFLLKPVKLADVKRIKQLIMRNEAEECKILSHSNKRKLQEDSD 175

[Close]

BLAST of Lcy09g016190 vs. TAIR 10
Match: AT3G48100.1 (response regulator 5 )

HSP 1 Score: 40.0 bits (92), Expect = 6.8e-04
Identity = 21/42 (50.00%), Postives = 31/42 (73.81%), Query Frame = 0


Query: 2   LKEGVEEFVVIPVKMYDVKRLKDFIMKRENKG-RKICPKRKL 43
           L+EG E+F++ PVK+ DVKRL+D +MK E +  + I  KR+L
Sbjct: 129 LEEGAEDFLLKPVKLADVKRLRDSLMKAEERAFKNIMHKREL 170

The following BLAST results are available for this feature:

BLAST of Lcy09g016190 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7G8V2	7.8e-05	50.94	Two-component response regulator ARR15 OS=Arabidopsis thaliana OX=3702 GN=ARR15 ...	[more]
Q9ZWS7	6.6e-04	53.06	Two-component response regulator ARR7 OS=Arabidopsis thaliana OX=3702 GN=ARR7 PE...	[more]

BLAST of Lcy09g016190 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BWA3	1.4e-12	76.92	two-component response regulator ARR5-like OS=Cucumis melo OX=3656 GN=LOC1034939...	[more]
A0A0A0LNZ6	5.2e-12	75.00	Response regulatory domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_...	[more]
A0A5A7URW7	8.9e-12	75.00	Two-component response regulator ARR5-like OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A5D3BK53	8.9e-12	75.00	Two-component response regulator ARR5-like OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A6J1BYP0	7.1e-09	69.09	two-component response regulator ARR5-like OS=Momordica charantia OX=3673 GN=LOC...	[more]

BLAST of Lcy09g016190 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008453146.1	2.8e-12	76.92	PREDICTED: two-component response regulator ARR5-like [Cucumis melo]	[more]
XP_004138134.1	1.1e-11	75.00	two-component response regulator ARR5 [Cucumis sativus]	[more]
KAE8652408.1	1.1e-11	75.00	hypothetical protein Csa_014096 [Cucumis sativus]	[more]
KAA0057900.1	1.8e-11	75.00	two-component response regulator ARR5-like [Cucumis melo var. makuwa]	[more]
TYJ98588.1	1.8e-11	75.00	two-component response regulator ARR5-like [Cucumis melo var. makuwa]	[more]

BLAST of Lcy09g016190 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G74890.1	5.5e-06	50.94	response regulator 15	[more]
AT1G19050.1	4.7e-05	53.06	response regulator 7	[more]
AT3G48100.1	6.8e-04	50.00	response regulator 5	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy09g016190.1	Lcy09g016190.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000160	phosphorelay signal transduction system
biological_process	GO:0016310	phosphorylation
molecular_function	GO:0016301	kinase activity