Lcy09g016090 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy09g016090
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Unknown protein
Location	Chr09: 25576912 .. 25577716 (-)
RNA-Seq Expression	Lcy09g016090
Synteny	Lcy09g016090

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GGGGCTACTGCGCCTCCGTCTCTTCCTCCTCAGGAAGGACGGGGAGGCCCCCGTTCAACCATTGGTCTTCCTATCGCAAGGCATCTTGTACTTCTCTTGGTGGGAACAGGATGTTCCTCGACCCCTGTTCTTATTTAATCGATCTCCGACTTGAGTTGGTGTCGTGTTGTAGGGCGTCGAGTCCATTCTTGGTCGTCGCCCGCAAGTCTAGCAATGTTTGATTTGCAGCCAGAATGTAGCCCTGAACGTTGTCTGAAAGCCCCTTTACCGCTGCTCCATATTGGCTACGTGATCATGGTAATCTCGAATAATGTCCGTGATGTCGGGCTCCAATGATGTGACAACCTCCCAATCTGGACTCAAAAGTTCACATCGTGCCAGAGTTCGTAGATTGGAGGAGCAGATCATGCACCTCAAGGAACGGGTTGGCGTTGAGCAAGGCTCGTTCCGAAGTGAACTTTTGAGTCCAGATTGGGAGGACTTAGAGCATTGGAGCCCGACATCACGGACATTATTCGAGATCACCATGATCGGGTAGCCAATATGCTGTAAAGGGGCTTTCAGACAACGTTCAAGGCTACATTTTGGCCGCAAATCAAACATTGCTAGACTTGCAGGCGACGACCAAGAATGGACTCGATGCCCTACAACACGATCTTCACCAACTAAGGTCGGAGATCGACGAGATAAGGATAGGGTTCGAGGAACATCCTATGTTCCCACCAAGAGAAGTACGGGACGCCTTGTGTTAGGCGGACAAATGGTTGAACGGGAGTCGGAAGAGGCGGAGGCGCAGCAACCCTGA

mRNA sequence

GGGGCTACTGCGCCTCCGTCTCTTCCTCCTCAGGAAGGACGGGGAGGCCCCCGTTCAACCATTGGTCTTCCTATCGCAAGGCATCTTGTACTTCTCTTGGTGGGAACAGGATGTTCCTCGACCCCTGTTCTTATTTAATCGATCTCCGACTTGAGTTGGTGTCGTGTTGTAGGGCGTCGAGTCCATTCTTGGTCGTCGCCCGCAAGTCTAGCAATGTTTGATTTGCAGCCAGAATGTAGCCCTGAACGTTGTCTGAAAGCCCCTTTACCGCTGCTCCATATTGGCTACGTGATCATGGTAATCTCGAATAATGTCCGTGATGTCGGGCTCCAATGATGTGACAACCTCCCAATCTGGACTCAAAAGTTCACATCGTGCCAGAGTTCGTAGATTGGAGGAGCAGATCATGCACCTCAAGGAACGGGTTGGCGTTGAGCAAGGCTCGTTCCGAAGGGCTTTCAGACAACGTTCAAGGCTACATTTTGGCCGCAAATCAAACATTGCTAGACTTGCAGGCGACGACCAAGAATGGACTCGATGCCCTACAACACGATCTTCACCAACTAAGGTCGGAGATCGACGAGATAAGGATAGGGTTCGAGGAACATCCTATGTTCCCACCAAGAGAAGTACGGGACGCCTTGTGTTAGGCGGACAAATGGTTGAACGGGAGTCGGAAGAGGCGGAGGCGCAGCAACCCTGA

Coding sequence (CDS)

ATGTCCGTGATGTCGGGCTCCAATGATGTGACAACCTCCCAATCTGGACTCAAAAGTTCACATCGTGCCAGAGTTCGTAGATTGGAGGAGCAGATCATGCACCTCAAGGAACGGGTTGGCGTTGAGCAAGGCTCGTTCCGAAGGGCTTTCAGACAACGTTCAAGGCTACATTTTGGCCGCAAATCAAACATTGCTAGACTTGCAGGCGACGACCAAGAATGGACTCGATGCCCTACAACACGATCTTCACCAACTAAGGTCGGAGATCGACGAGATAAGGATAGGGTTCGAGGAACATCCTATGTTCCCACCAAGAGAAGTACGGGACGCCTTGTGTTAGGCGGACAAATGGTTGAACGGGAGTCGGAAGAGGCGGAGGCGCAGCAACCCTGA

Protein sequence

MSVMSGSNDVTTSQSGLKSSHRARVRRLEEQIMHLKERVGVEQGSFRRAFRQRSRLHFGRKSNIARLAGDDQEWTRCPTTRSSPTKVGDRRDKDRVRGTSYVPTKRSTGRLVLGGQMVERESEEAEAQQP

Homology

The following BLAST results are available for this feature:

BLAST of Lcy09g016090 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy09g016090 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy09g016090 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy09g016090 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 18..38
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..19
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 74..130
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 85..100

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy09g016090.1	Lcy09g016090.1	mRNA