Lcy09g015910 (gene) Sponge gourd (P93075) v1

Overview
NameLcy09g015910
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionRNA-directed DNA polymerase (reverse transcriptase)-related family protein
LocationChr09: 24765867 .. 24767534 (+)
RNA-Seq ExpressionLcy09g015910
SyntenyLcy09g015910
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGCAAGAGGGTGGGCAATGGCAAATCTATTAATTTTTTTCTAGATCCATGGATACCGAAGGAAACTACTTTCAAACTGTTACCAATTGGTGAGGAGACAATCCCATGGGAGGCAAAAGTTTCAGATTTTATTACGCCGTCTTATGGATGGAATATGGATGAAAAACAACGCGTGACCCATGCAGGTGATGCAAAGATAGGGTATAAAGTTGCACTTCGTTTCGCTTCTAAACAGGTATCCTCAAGTGAGAATGCTGGCAGGATGTGGTGGAACACACTTTGGAAAGCTAAAATTCCATCCAAGATTAAGATTTTCATATGGAAAACATATAATGAATGTTTGCCGGTAAATTGGTGTTTGATGAGAAGGGGAATGGATGTATCGCCAATATGTGGAATGTGTTTGTCCAAAGTTGAAACTGTGGATCATGCTCTTAGTGGCTGTGCGCGAGCTAAGTTAATCTGTGGTCATATCTTTACAAGATATGATAAGGGTATCCGACAGGCGAACAACTTTGCCGATCGATTAGCTTATTTGGCAACTCATTTATCAGATGAGGTTTTTGAACGGGCTTACATAGCCTTTTGGGCTATATGGAATGACCGGAATAGTCACTCTAGAGGTTTGAAGATAATGGACTGGGACCAACGCTGTCAATGGATATGTGGGTATTGGGAGGAAACACGTCTGCCACGACATTCTTTAGTCAAGGAGATAGCGTTTCAAGATGTTGTTCGAAACTCCCATGAGCAGGTTTACAAGTTGTTCACTGATGCGGCGGTTAACCCACACAACACTGGTGCAGGGTATGGTATGGTGATTTTGGGTCCTCATGGCACACTAATAGCGGCAATGGAGATGTTTGACTCAACGTGTTTTACTCCGTTAGCAACTGAGGTTCAAGCAATTCTACATGGAATTCGACTAGTACAACGTCTGCAATACACGACGGTAAAAATTGTTTCAGATTCTCTGATTGCGATACAAATGATATCAGGTGAATTGCCAATTTCATCTGAGGTCTATCACTGGATTGTCCGAATCCAAGAGCTAAGTGCCCATTTTTCCAATTCATCGTTCTCTCATATTCCTAGAGAAGGGAATAGAATGGCAGATTCATTAGCAAAGCATGCTTTGGCTAATAGTAGGTCTTTGTTGTGGTTGTCAGATTTCCCACCTTGACTTTTATCCATGGGAATGACAACTTCAGACAAATGTATTTTGGATTGTAATTGTTTATGTTAATGATAAATGTTTCTTTCCTAAAAAAAAAAAAAAAAAAAATTATCAAATGTTCCCTAAAGGATATTTTTAAAGTATTATTCACATAACTTCCTAAATGCTAAAAAAATCATTAAAATAAAGCAAATGAAATGATAACAAATAAACTAAACTTTATAAAAAAAACAAACATGGAAAAAATAATTTCATAAAAAAAAAAAACTATTGGAGAAATAATTAAAAGAAAAATGTTTTAAAACATACTTATAATGTGTGAAATGAACCAACCTGGAAGGCATGTGGACACCCATATAGACTATATAACTCTAGGGATTTATTTCCTTTAGGCTTCTCCTTGTGCGCAACTGCCTTGCTCTTCAACGCATTCTTCAGGTTCTTAATAGTCTTCTTAAATATCATTGTGCTCTAATCATAGTTGCATAA

mRNA sequence

ATGCGCAAGAGGGTGGGCAATGGCAAATCTATTAATTTTTTTCTAGATCCATGGATACCGAAGGAAACTACTTTCAAACTGTTACCAATTGGTGAGGAGACAATCCCATGGGAGGCAAAAGTTTCAGATTTTATTACGCCGTCTTATGGATGGAATATGGATGAAAAACAACGCGTGACCCATGCAGGTGATGCAAAGATAGGGTATAAAGTTGCACTTCGTTTCGCTTCTAAACAGGTATCCTCAAGTGAGAATGCTGGCAGGATGTGGTGGAACACACTTTGGAAAGCTAAAATTCCATCCAAGATTAAGATTTTCATATGGAAAACATATAATGAATGTTTGCCGGTAAATTGGTGTTTGATGAGAAGGGGAATGGATGTATCGCCAATATGTGGAATGTGTTTGTCCAAAGTTGAAACTGTGGATCATGCTCTTAGTGGCTGTGCGCGAGCTAAGTTAATCTGTGGTCATATCTTTACAAGATATGATAAGGGTATCCGACAGGCGAACAACTTTGCCGATCGATTAGCTTATTTGGCAACTCATTTATCAGATGAGGTTTTTGAACGGGCTTACATAGCCTTTTGGGCTATATGGAATGACCGGAATAGTCACTCTAGAGGTTTGAAGATAATGGACTGGGACCAACGCTGTCAATGGATATGTGGGTATTGGGAGGAAACACGTCTGCCACGACATTCTTTAGTCAAGGAGATAGCGTTTCAAGATGTTGTTCGAAACTCCCATGAGCAGGTTCTTAATAGTCTTCTTAAATATCATTGTGCTCTAATCATAGTTGCATAA

Coding sequence (CDS)

ATGCGCAAGAGGGTGGGCAATGGCAAATCTATTAATTTTTTTCTAGATCCATGGATACCGAAGGAAACTACTTTCAAACTGTTACCAATTGGTGAGGAGACAATCCCATGGGAGGCAAAAGTTTCAGATTTTATTACGCCGTCTTATGGATGGAATATGGATGAAAAACAACGCGTGACCCATGCAGGTGATGCAAAGATAGGGTATAAAGTTGCACTTCGTTTCGCTTCTAAACAGGTATCCTCAAGTGAGAATGCTGGCAGGATGTGGTGGAACACACTTTGGAAAGCTAAAATTCCATCCAAGATTAAGATTTTCATATGGAAAACATATAATGAATGTTTGCCGGTAAATTGGTGTTTGATGAGAAGGGGAATGGATGTATCGCCAATATGTGGAATGTGTTTGTCCAAAGTTGAAACTGTGGATCATGCTCTTAGTGGCTGTGCGCGAGCTAAGTTAATCTGTGGTCATATCTTTACAAGATATGATAAGGGTATCCGACAGGCGAACAACTTTGCCGATCGATTAGCTTATTTGGCAACTCATTTATCAGATGAGGTTTTTGAACGGGCTTACATAGCCTTTTGGGCTATATGGAATGACCGGAATAGTCACTCTAGAGGTTTGAAGATAATGGACTGGGACCAACGCTGTCAATGGATATGTGGGTATTGGGAGGAAACACGTCTGCCACGACATTCTTTAGTCAAGGAGATAGCGTTTCAAGATGTTGTTCGAAACTCCCATGAGCAGGTTCTTAATAGTCTTCTTAAATATCATTGTGCTCTAATCATAGTTGCATAA

Protein sequence

MRKRVGNGKSINFFLDPWIPKETTFKLLPIGEETIPWEAKVSDFITPSYGWNMDEKQRVTHAGDAKIGYKVALRFASKQVSSSENAGRMWWNTLWKAKIPSKIKIFIWKTYNECLPVNWCLMRRGMDVSPICGMCLSKVETVDHALSGCARAKLICGHIFTRYDKGIRQANNFADRLAYLATHLSDEVFERAYIAFWAIWNDRNSHSRGLKIMDWDQRCQWICGYWEETRLPRHSLVKEIAFQDVVRNSHEQVLNSLLKYHCALIIVA
Homology
BLAST of Lcy09g015910 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 1.4e-04
Identity = 19/60 (31.67%), Postives = 33/60 (55.00%), Query Frame = 0

Query: 90  WWNTLWKAKIPSKIKIFIWKTYNECLPVNWCLMRRGMDVSPICGMCLSKVETVDHALSGC 149
           ++N LWK ++P ++K F+W   N+ +       RR +  S +C +C   VE++ H L  C
Sbjct: 287 FFNCLWKVRVPERVKTFLWLVGNQAVMTEEERHRRHLSASNVCQVCKGGVESMLHVLRDC 346

BLAST of Lcy09g015910 vs. ExPASy TrEMBL
Match: A0A803NZC3 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 5.9e-27
Identity = 76/243 (31.28%), Postives = 111/243 (45.68%), Query Frame = 0

Query: 1    MRKRVGNGKSINFFLDPWIPKETTFKLLPIGEETIPWEAKVSDFITPSYGWNMDEKQRVT 60
            +R +VG+G+SI    DPW+P  T F+  P+    I    KVS  ITP   WN+D      
Sbjct: 896  LRWKVGDGQSITCRYDPWLPGVTNFQ--PLVVTDIDLHLKVSSLITPERIWNIDLLNSYF 955

Query: 61   HAGD-----AKIGYKVALRFASKQVSSSENAGRMWWNTLWKAKIPSKIKIFIWKTYNECL 120
               D      K GY +A     +Q S S    + WW   WK  +PSK++IF+W+  ++ L
Sbjct: 956  IPSDIERILIKSGYFLATNLEEQQPSISGMQSQQWWKKFWKLNLPSKVRIFLWRAIHDYL 1015

Query: 121  PVNWCLMRRGMDVSPICGMCLSKVETVDHALSGCARAKLICGHIFTRYDKGIRQANNFAD 180
            P    L  R +  SP C +C S+ ET+ HAL  C R K I           +       +
Sbjct: 1016 PATAILFHRHIAESPCCLLCKSESETIMHALFYCHRPKHIWKDSSFPLGSILASGMTLKE 1075

Query: 181  RLAYLATHLSDEVFERAYIAFWAIWNDRNSHSRGLKIMDWDQRCQWICGYWEETRLPRHS 239
             L +++T  SD   E+     W IWN+ N+   G KI   +    +   + EE +  + S
Sbjct: 1076 CLLHISTIWSDTKIEQFITILWHIWNEMNNGKHGNKIKPHEMVLYFALSFLEEFQAAQQS 1135

BLAST of Lcy09g015910 vs. ExPASy TrEMBL
Match: A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 7.7e-27
Identity = 79/287 (27.53%), Postives = 129/287 (44.95%), Query Frame = 0

Query: 1    MRKRVGNGKSINFFLDPWIPKETTFKLLPIGEETIPWEAKVSDFITPSYGWNMDEKQRVT 60
            +R RVGNG +I  F DPW+P+ TTFK L      +  +  V+ FIT    W++     ++
Sbjct: 1015 LRLRVGNGSTIKAFSDPWLPRPTTFKPLRFNNGAL--DTTVASFITADGNWDVTS---IS 1074

Query: 61   HA--------------------------------GDAKIGYKVALRFASKQVSSSENAGR 120
            H+                                   + GYK+ +       S+S N   
Sbjct: 1075 HSFCNEDRDLILSMPISSYNLQDSWLWHYDKRGNYSVRSGYKLYMHLKCNATSASTNYRG 1134

Query: 121  MWWNTLWKAKIPSKIKIFIWKTYNECLPVNWCLMRRGMDVSPICGMCLSKVETVDHALSG 180
              WN++WK  +P+KIKIFIW++ +E +P    L+ RG+   P C +C  + E++ HA   
Sbjct: 1135 TQWNSIWKLTVPTKIKIFIWRSAHEHIPTAQNLLLRGIGELPACTICGDRRESIIHAFFH 1194

Query: 181  CARAKLICGHIFTRYDKGIRQAN-NFADRLAYLATHLSDEVFERAYIAFWAIWNDRNSHS 240
            C RA+ I   +F        + N +F +  + L   L  +    A I  W IWNDRNS  
Sbjct: 1195 CKRARQIWRTLFPFLTCLSAEDNISFLELWSSLTEQLEPKDLNLAAITGWGIWNDRNSLI 1254

Query: 241  RGLKIMDWDQRCQWICGYWEETRLPRHSLVKEIAFQDVVRNSHEQVL 255
             G ++   + +C+W+  +     L  HS  +   +    +++H  V+
Sbjct: 1255 HGKQVSPVEFKCEWLTPF-----LDSHSQAQMSNYSPRTQSNHRPVV 1291

BLAST of Lcy09g015910 vs. ExPASy TrEMBL
Match: A0A803Q2K8 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 5.0e-26
Identity = 75/238 (31.51%), Postives = 116/238 (48.74%), Query Frame = 0

Query: 1    MRKRVGNGKSINFFLDPWIPKETTFKLLPIGEETIPWEAKVSDFITPSYGWNM------- 60
            +R RVG+G SIN   D W+P  TTFK  P   +       V+D IT    W++       
Sbjct: 1293 LRWRVGSGLSINCATDAWLPGTTTFK--PYFFKGADPNLLVADLITEQRQWDLISLRANF 1352

Query: 61   ------------------DEKQRVTHA----GDAKIGYKVALRFASKQVSSSENAGRMWW 120
                              D+    +H+     + K GY++A+ +A +  ++S ++   WW
Sbjct: 1353 SQPDVDRILSIPLSLFPHDDAMIWSHSFTGIYNVKSGYQLAVSYAEQDDTASSHSMENWW 1412

Query: 121  NTLWKAKIPSKIKIFIWKTYNECLPVNWCLMRRGMDVSPICGMCLSKVETVDHALSGCAR 180
            +T WK K+P K++IF+WK ++  LPV   L RR +  SP C +C S  E+++HAL  C R
Sbjct: 1413 STFWKMKLPPKVRIFVWKVFHSTLPVAAELFRRHIATSPHCSICNSAEESINHALFDCPR 1472

Query: 181  AKLICGHIFTRYDKGIRQANNFADRLAYLATHLSDEVFERAYIAFWAIWNDRNSHSRG 210
            AK +        D    + +  AD L +L+T LS   FE   +  W  W++RN+   G
Sbjct: 1473 AKAVWELSSLHIDFHTLRQSASADILLHLSTALSTSEFELFLVLCWCNWHERNAIYHG 1528

BLAST of Lcy09g015910 vs. ExPASy TrEMBL
Match: A0A803Q6Z2 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 1.6e-24
Identity = 76/259 (29.34%), Postives = 112/259 (43.24%), Query Frame = 0

Query: 1    MRKRVGNGKSINFFLDPWIPKETTFKLLPIGEETIPWEAKVSDFITPSYGWNMDEKQRVT 60
            +R R+G+G  +N    PWIP  + FK  P+   +   + KV+DFIT S  W++ + Q+  
Sbjct: 1659 LRWRIGSGADVNCVSQPWIPGPSNFK--PLLFLSPDRDVKVADFITHSRQWDVPKLQQFF 1718

Query: 61   HAGD-----------------------------AKIGYKVALRFASKQVSSSENAGRMWW 120
               D                              K GYK+A      Q +SS      WW
Sbjct: 1719 TPPDVDRILSIPLSLFPCEDVLLWHYSSAGFYTVKSGYKLASDVPDSQPNSSHTT-ETWW 1778

Query: 121  NTLWKAKIPSKIKIFIWKTYNECLPVNWCLMRRGMDVSPICGMCLSKVETVDHALSGCAR 180
               W  K+PSKI+IF W+ Y+E LP    L  R +  SP C +C   +ET++HA   C R
Sbjct: 1779 QYFWGLKLPSKIRIFAWRAYHEALPTAAILQYRHISSSPQCPLCQVHLETINHAFFWCNR 1838

Query: 181  AKLICGHIFTRYDKGIRQANNFADRLAYLATHLSDEVFERAYIAFWAIWNDRNSHSRGLK 231
            AK +  +     +  +    +F+D L Y+++ L  E  E      W IW  RN+ +    
Sbjct: 1839 AKQVWKNWDESINWSLSMTCSFSDFLVYVSSQLQAEKVELFLTTLWCIWTARNAETHSKS 1898

BLAST of Lcy09g015910 vs. ExPASy TrEMBL
Match: A0A803QAN3 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 1.0e-23
Identity = 72/234 (30.77%), Postives = 104/234 (44.44%), Query Frame = 0

Query: 1    MRKRVGNGKSINFFLDPWIPKETTFKLLP-IGEETIPWEAKVSDFITPSYGWNMD----- 60
            MR ++G G +I    DPWIP  T FK +   G  T+P    VS FIT    WN+D     
Sbjct: 781  MRYKIGKGVNIATGTDPWIPSYTNFKPVSYTGPPTLP----VSTFITDQMEWNIDMLNEF 840

Query: 61   -------------------EKQRVTHAG-----DAKIGYKVALRFASKQVSSSENAGRMW 120
                               + + + H       + K G+ +A     + +SS+ +  R W
Sbjct: 841  FQPIDVDKILSIPLSFFGGQDRLIWHHSSSGIYNVKSGFHLATSLEEQHISSTSDPHRDW 900

Query: 121  WNTLWKAKIPSKIKIFIWKTYNECLPVNWCLMRRGMDVSPICGMCLSKVETVDHALSGCA 180
            W   W   +P K++IF WK ++  LPV   L ++ +  S  C +C S  E++ HAL GC 
Sbjct: 901  WRYFWNLNLPPKVRIFAWKVFHNILPVAAALFKKKIIDSAACSLCTSNWESIGHALFGCK 960

Query: 181  RAKLICGHIFTRYDKGIRQANNFADRLAYLATHLSDEVFERAYIAFWAIWNDRN 205
             AK I        D    Q+    D L YL++  + E FE      W IW+DRN
Sbjct: 961  HAKGIWTDSKFSLDYHKAQSMFNGDYLLYLSSMYNQEDFELLICIMWGIWSDRN 1010

BLAST of Lcy09g015910 vs. NCBI nr
Match: XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia])

HSP 1 Score: 131.0 bits (328), Expect = 1.6e-26
Identity = 79/287 (27.53%), Postives = 129/287 (44.95%), Query Frame = 0

Query: 1    MRKRVGNGKSINFFLDPWIPKETTFKLLPIGEETIPWEAKVSDFITPSYGWNMDEKQRVT 60
            +R RVGNG +I  F DPW+P+ TTFK L      +  +  V+ FIT    W++     ++
Sbjct: 1015 LRLRVGNGSTIKAFSDPWLPRPTTFKPLRFNNGAL--DTTVASFITADGNWDVTS---IS 1074

Query: 61   HA--------------------------------GDAKIGYKVALRFASKQVSSSENAGR 120
            H+                                   + GYK+ +       S+S N   
Sbjct: 1075 HSFCNEDRDLILSMPISSYNLQDSWLWHYDKRGNYSVRSGYKLYMHLKCNATSASTNYRG 1134

Query: 121  MWWNTLWKAKIPSKIKIFIWKTYNECLPVNWCLMRRGMDVSPICGMCLSKVETVDHALSG 180
              WN++WK  +P+KIKIFIW++ +E +P    L+ RG+   P C +C  + E++ HA   
Sbjct: 1135 TQWNSIWKLTVPTKIKIFIWRSAHEHIPTAQNLLLRGIGELPACTICGDRRESIIHAFFH 1194

Query: 181  CARAKLICGHIFTRYDKGIRQAN-NFADRLAYLATHLSDEVFERAYIAFWAIWNDRNSHS 240
            C RA+ I   +F        + N +F +  + L   L  +    A I  W IWNDRNS  
Sbjct: 1195 CKRARQIWRTLFPFLTCLSAEDNISFLELWSSLTEQLEPKDLNLAAITGWGIWNDRNSLI 1254

Query: 241  RGLKIMDWDQRCQWICGYWEETRLPRHSLVKEIAFQDVVRNSHEQVL 255
             G ++   + +C+W+  +     L  HS  +   +    +++H  V+
Sbjct: 1255 HGKQVSPVEFKCEWLTPF-----LDSHSQAQMSNYSPRTQSNHRPVV 1291

BLAST of Lcy09g015910 vs. NCBI nr
Match: XP_030508852.1 (uncharacterized protein LOC115723496 [Cannabis sativa])

HSP 1 Score: 125.6 bits (314), Expect = 6.6e-25
Identity = 78/238 (32.77%), Postives = 110/238 (46.22%), Query Frame = 0

Query: 1    MRKRVGNGKSINFFLDPWIPKETTFKLLPIGEETIPWEAKVSDFITPSYGWNM------- 60
            +R RVG+G+ IN   D W+P  TTFK  P   +       V+D IT    W+M       
Sbjct: 935  LRWRVGSGERINCKTDSWLPGHTTFK--PYFFKGPDPNLLVADLITEHRTWDMISLETNF 994

Query: 61   ------------------DE----KQRVTHAGDAKIGYKVALRFASKQVSSSENAGRMWW 120
                              D+     Q  T   + K GY  A+  A +  S+  N+   WW
Sbjct: 995  NQADINRVLSIPLSPYPHDDVLIWNQSFTGVYNVKSGYHFAVSLAEQDDSTCSNSIEHWW 1054

Query: 121  NTLWKAKIPSKIKIFIWKTYNECLPVNWCLMRRGMDVSPICGMCLSKVETVDHALSGCAR 180
            +  WK K+P K++IF+WK ++  LPV   L RR +  SP C +C S  ETV HAL  C R
Sbjct: 1055 SNFWKLKLPPKVRIFVWKVFHTSLPVAAELYRRHIAFSPYCTICNSCEETVHHALFSCPR 1114

Query: 181  AKLICGHIFTRYDKGIRQANNFADRLAYLATHLSDEVFERAYIAFWAIWNDRNSHSRG 210
            AK +        D    + ++ AD L  L+T LS    E   +  W+IW++RN+   G
Sbjct: 1115 AKAVWELSNFSIDFQTIERSSTADTLLLLSTSLSSSELELFLVLCWSIWHERNAIYHG 1170

BLAST of Lcy09g015910 vs. NCBI nr
Match: XP_030502765.1 (uncharacterized protein LOC115717936 [Cannabis sativa])

HSP 1 Score: 123.6 bits (309), Expect = 2.5e-24
Identity = 72/238 (30.25%), Postives = 111/238 (46.64%), Query Frame = 0

Query: 1    MRKRVGNGKSINFFLDPWIPKETTFKLLPIGEETIPWEAKVSDFITPSYGWNMDEKQ--- 60
            +R RVG+G +IN   D W+P  TTFK  P   +       V+D I+    W++   Q   
Sbjct: 824  LRWRVGSGLTINCATDAWMPGNTTFK--PYFFKGADPNLMVADLISEQRQWDLISLQANF 883

Query: 61   --------------------------RVTHAGDAKIGYKVALRFASKQVSSSENAGRMWW 120
                                        T   + K GY++A+  A +  ++S ++   WW
Sbjct: 884  SQADVDRILSIPLSLFPHDDVLIWSHSFTGIYNVKSGYQLAVSLAEQDDTASSSSMEHWW 943

Query: 121  NTLWKAKIPSKIKIFIWKTYNECLPVNWCLMRRGMDVSPICGMCLSKVETVDHALSGCAR 180
            +T WK KIP K++IF+WK ++  LPV   L RR +  SP C +C S  E++ HAL  C R
Sbjct: 944  STFWKVKIPPKVRIFVWKVFHSTLPVAAELYRRHIATSPYCTICNSAEESITHALFSCPR 1003

Query: 181  AKLICGHIFTRYDKGIRQANNFADRLAYLATHLSDEVFERAYIAFWAIWNDRNSHSRG 210
            AK +        D    +    AD L +L+T L+   +E+  +  W  W++RN+   G
Sbjct: 1004 AKTVWDLSPLNIDFNTLRQTASADILLHLSTVLTTSEYEQFLVICWCNWHERNAIYHG 1059

BLAST of Lcy09g015910 vs. NCBI nr
Match: XP_030509050.1 (uncharacterized protein LOC115723712 [Cannabis sativa])

HSP 1 Score: 123.2 bits (308), Expect = 3.3e-24
Identity = 76/259 (29.34%), Postives = 112/259 (43.24%), Query Frame = 0

Query: 1    MRKRVGNGKSINFFLDPWIPKETTFKLLPIGEETIPWEAKVSDFITPSYGWNMDEKQRVT 60
            +R R+G+G  +N    PWIP  + FK  P+   +   + KV+DFIT S  W++ + Q+  
Sbjct: 935  LRWRIGSGADVNCVSQPWIPGPSNFK--PLLFLSPDRDVKVADFITHSRQWDVPKLQQFF 994

Query: 61   HAGD-----------------------------AKIGYKVALRFASKQVSSSENAGRMWW 120
               D                              K GYK+A      Q +SS      WW
Sbjct: 995  TPPDVDRILSIPLSLFPCEDVLLWHYSSAGFYTVKSGYKLASDVPDSQPNSSHTT-ETWW 1054

Query: 121  NTLWKAKIPSKIKIFIWKTYNECLPVNWCLMRRGMDVSPICGMCLSKVETVDHALSGCAR 180
               W  K+PSKI+IF W+ Y+E LP    L  R +  SP C +C   +ET++HA   C R
Sbjct: 1055 QYFWGLKLPSKIRIFAWRAYHEALPTAAILQYRHISSSPQCPLCQVHLETINHAFFWCNR 1114

Query: 181  AKLICGHIFTRYDKGIRQANNFADRLAYLATHLSDEVFERAYIAFWAIWNDRNSHSRGLK 231
            AK +  +     +  +    +F+D L Y+++ L  E  E      W IW  RN+ +    
Sbjct: 1115 AKQVWKNWDESINWSLSMTCSFSDFLVYVSSQLQAEKVELFLTTLWCIWTARNAETHSKS 1174

BLAST of Lcy09g015910 vs. NCBI nr
Match: XP_030509046.1 (uncharacterized protein LOC115723707 [Cannabis sativa])

HSP 1 Score: 120.2 bits (300), Expect = 2.8e-23
Identity = 81/291 (27.84%), Postives = 118/291 (40.55%), Query Frame = 0

Query: 1   MRKRVGNGKSINFFLDPWIPKETTFKLLPIGEETIPWEAKVSDFITPSYGWNMDEKQR-- 60
           +R ++GNG  +   L+PWIP    FK  PI     P    VS +I  +  WN+ +  +  
Sbjct: 635 LRYKIGNGFHVRSGLNPWIPGHDEFK--PISYTRDP-STPVSTYILDTMEWNLPQLHQDF 694

Query: 61  ----------------------VTHAGD-----AKIGYKVALRFASKQVSSSENAGRMWW 120
                                 + H  +      K G+ +A   + K   SS +  + WW
Sbjct: 695 AQIDIDRILTIPLSFYQSSDRLIWHHNNNGFYSVKSGFHLATSLSEKDQESSSDDYKTWW 754

Query: 121 NTLWKAKIPSKIKIFIWKTYNECLPVNWCLMRRGMDVSPICGMCLSKVETVDHALSGCAR 180
              WK  +P K+KIF WK     LPV   L +R +  S +C  C S  E++ HAL  C  
Sbjct: 755 KFFWKLHLPPKVKIFTWKVIQNALPVTTALHKRKVIDSALCTRCKSAWESIGHALFSCKF 814

Query: 181 AKLICGHIFTRYDKGIRQANNFADRLAYLATHLSDEVFERAYIAFWAIWNDRNSHSRGLK 240
           AK I  +   + D          D L +LA+ +  E FE      W+IWNDRN    G K
Sbjct: 815 AKSIWKNTKFQIDTHHAMGMFNGDYLIHLASTMDKENFEALICVMWSIWNDRNKFLHGGK 874

Query: 241 IMDWDQRCQWICGYWEETRLPR----------HSLVKEIAFQDVVRNSHEQ 253
             D      +   Y E+ R  +          H  +  IA     R++H+Q
Sbjct: 875 QRDSFTLASYALNYIEQYRSAKRISCTKLQQPHQQINHIA-TPTSRSTHQQ 921

BLAST of Lcy09g015910 vs. TAIR 10
Match: AT3G26855.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 54.7 bits (130), Expect = 1.3e-07
Identity = 25/64 (39.06%), Postives = 32/64 (50.00%), Query Frame = 0

Query: 90  WWNTLWKAKIPSKIKIFIWKTYNECLPVNWCLMRRGMDVSPICGMCLSKVETVDHALSGC 149
           W   +W  KI  KIK+ IWK  N  LPV   L+ R + + P C  C    ET+ H L  C
Sbjct: 5   WIGDIWSLKISPKIKLLIWKALNNALPVGAQLLSRNISIEPFCTRC-RDFETITHILFNC 64

Query: 150 ARAK 154
             A+
Sbjct: 65  PFAQ 67

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
P0C2F61.4e-0431.67Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1... [more]
Match NameE-valueIdentityDescription
A0A803NZC35.9e-2731.28Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A6J1DX307.7e-2727.53uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
A0A803Q2K85.0e-2631.51Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A803Q6Z21.6e-2429.34Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A803QAN31.0e-2330.77Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
XP_022158377.11.6e-2627.53uncharacterized protein LOC111024874 [Momordica charantia][more]
XP_030508852.16.6e-2532.77uncharacterized protein LOC115723496 [Cannabis sativa][more]
XP_030502765.12.5e-2430.25uncharacterized protein LOC115717936 [Cannabis sativa][more]
XP_030509050.13.3e-2429.34uncharacterized protein LOC115723712 [Cannabis sativa][more]
XP_030509046.12.8e-2327.84uncharacterized protein LOC115723707 [Cannabis sativa][more]
Match NameE-valueIdentityDescription
AT3G26855.11.3e-0739.06RNA-directed DNA polymerase (reverse transcriptase)-related family protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026960Reverse transcriptase zinc-binding domainPFAMPF13966zf-RVTcoord: 82..153
e-value: 3.1E-16
score: 59.9
NoneNo IPR availablePANTHERPTHR46736FAMILY NOT NAMEDcoord: 81..204
NoneNo IPR availablePANTHERPTHR46736:SF6SUBFAMILY NOT NAMEDcoord: 81..204

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy09g015910.1Lcy09g015910.1mRNA