Lcy09g015450 (gene) Sponge gourd (P93075) v1

Overview
NameLcy09g015450
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionReverse transcriptase domain-containing protein
LocationChr09: 22344383 .. 22345161 (-)
RNA-Seq ExpressionLcy09g015450
SyntenyLcy09g015450
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTAAACATCCCAAACAAGCTTAAGATCTTTGCTTGGCGGGCCAGCCTGAATATCCTTCCAACCAGGATGAATCTTGTCAACCGTCGAGTCCATAATGATCCCCGATGCCTAAATGTGGGAAAGCAAATGAAACAACGCTTCATACTCTATAGGCCTGCAAGAAGGTAAGAAAGCACTGGGCCCGCTGGAGCCCAGTGCAATCTCTTTTAAATAACCATTTTGATGATTCTTTTGATTTGTTTTGTAGGTTTCAGGAGAAACTAAGCTCTGGTGACATGGCAATCTTTGTGGCAATTTTGTGGTCCATATGGAACAATAGAAATAAAGTTGTTTTTCAGGGCAACTGGAACAATTACCAACAAGAAGATGACCCTTTAGATTGGGCGTCAGATTACATTTTAGAGTTCATGGAGGCTCAAACAAAGCATCATGGAAACAGAGAGCGATCGAGAAAAGCAGCTGATGATTCCCGTCAAGTAGAGTGTGTACTGCAGCCCCAAAACCAATTCAAGTTAAATGTGGGTGCGTCTTTAGCAAATGGGGAGATGGGATTAGGCATGATCATCAGAAACTCTAAGGGTGAAATGATGGCAGCTGCTGAAAATTTCAGGGGAACGAGTTGTACTGTAGAGTGGGCAGAAACACAAGCACTTGTAGAGGGTGTGCATCTAGCTATGGATTCGGGCTTATCACTAGTTTGGGCAGAGATGGATTCTAAAATTGTTTGGAATTTACTTTATGATCGAGAACAATATCTAAATGAAATAGCCTCATAA

mRNA sequence

ATGCTAAACATCCCAAACAAGCTTAAGATCTTTGCTTGGCGGGCCAGCCTGAATATCCTTCCAACCAGGATGAATCTTGTCAACCGTCGAGTCCATAATGATCCCCGATGCCTAAATGTGGGAAAGCAAATGAAACAACGCTTCATACTCTATAGGCCTGCAAGAAGGTTTCAGGAGAAACTAAGCTCTGGTGACATGGCAATCTTTGTGGCAATTTTGTGGTCCATATGGAACAATAGAAATAAAGTTGTTTTTCAGGGCAACTGGAACAATTACCAACAAGAAGATGACCCTTTAGATTGGGCGTCAGATTACATTTTAGAGTTCATGGAGGCTCAAACAAAGCATCATGGAAACAGAGAGCGATCGAGAAAAGCAGCTGATGATTCCCGTCAAGTAGAGTGTGTACTGCAGCCCCAAAACCAATTCAAGTTAAATGTGGGTGCGTCTTTAGCAAATGGGGAGATGGGATTAGGCATGATCATCAGAAACTCTAAGGGTGAAATGATGGCAGCTGCTGAAAATTTCAGGGGAACGAGTTGTACTGTAGAGTGGGCAGAAACACAAGCACTTGTAGAGGGTGTGCATCTAGCTATGGATTCGGGCTTATCACTAGTTTGGGCAGAGATGGATTCTAAAATTGTTTGGAATTTACTTTATGATCGAGAACAATATCTAAATGAAATAGCCTCATAA

Coding sequence (CDS)

ATGCTAAACATCCCAAACAAGCTTAAGATCTTTGCTTGGCGGGCCAGCCTGAATATCCTTCCAACCAGGATGAATCTTGTCAACCGTCGAGTCCATAATGATCCCCGATGCCTAAATGTGGGAAAGCAAATGAAACAACGCTTCATACTCTATAGGCCTGCAAGAAGGTTTCAGGAGAAACTAAGCTCTGGTGACATGGCAATCTTTGTGGCAATTTTGTGGTCCATATGGAACAATAGAAATAAAGTTGTTTTTCAGGGCAACTGGAACAATTACCAACAAGAAGATGACCCTTTAGATTGGGCGTCAGATTACATTTTAGAGTTCATGGAGGCTCAAACAAAGCATCATGGAAACAGAGAGCGATCGAGAAAAGCAGCTGATGATTCCCGTCAAGTAGAGTGTGTACTGCAGCCCCAAAACCAATTCAAGTTAAATGTGGGTGCGTCTTTAGCAAATGGGGAGATGGGATTAGGCATGATCATCAGAAACTCTAAGGGTGAAATGATGGCAGCTGCTGAAAATTTCAGGGGAACGAGTTGTACTGTAGAGTGGGCAGAAACACAAGCACTTGTAGAGGGTGTGCATCTAGCTATGGATTCGGGCTTATCACTAGTTTGGGCAGAGATGGATTCTAAAATTGTTTGGAATTTACTTTATGATCGAGAACAATATCTAAATGAAATAGCCTCATAA

Protein sequence

MLNIPNKLKIFAWRASLNILPTRMNLVNRRVHNDPRCLNVGKQMKQRFILYRPARRFQEKLSSGDMAIFVAILWSIWNNRNKVVFQGNWNNYQQEDDPLDWASDYILEFMEAQTKHHGNRERSRKAADDSRQVECVLQPQNQFKLNVGASLANGEMGLGMIIRNSKGEMMAAAENFRGTSCTVEWAETQALVEGVHLAMDSGLSLVWAEMDSKIVWNLLYDREQYLNEIAS
Homology
BLAST of Lcy09g015450 vs. ExPASy TrEMBL
Match: A0A6J1DAR4 (uncharacterized protein LOC111018954 OS=Momordica charantia OX=3673 GN=LOC111018954 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 8.9e-16
Identity = 67/228 (29.39%), Postives = 106/228 (46.49%), Query Frame = 0

Query: 2    LNIPNKLKIFAWRASLNILPTRMNLVNRRVHNDPRCLNVGKQ------------------ 61
            ++IPNK+K+F WR  L+ LPT  NL  R V     C   G+                   
Sbjct: 842  MHIPNKIKVFLWRLCLDRLPTGCNLSKRGVEITNCCYFCGRNGEDSIHLFWICKFAEALW 901

Query: 62   MKQRFILYRP---ARRFQEKLSSGDMAIFVAILWSIWNNRNKVVFQGNWNN-YQQEDDPL 121
            +  +F    P    R   E LS  D      ++W +WN RN   F  +    ++   + +
Sbjct: 902  INSKFGKLSPFLILRESHESLSKADFEELCVVIWGLWNQRNARAFNDSTKTVFKIGMELV 961

Query: 122  DWASDYILEFMEAQTKHHGNRERSRKAADDSRQVECVLQPQNQ--FKLNVGASL--ANGE 181
            +WA+ Y +EF EA++     R         +   E + QP ++  +K+N  AS   ++  
Sbjct: 962  EWANKYAMEFREAKSNPITGRV--------TNTAEILWQPPDEGIYKINTDASFLASDQH 1021

Query: 182  MGLGMIIRNSKGEMMAAAENFRGTSCTVEWAETQALVEGVHLAMDSGL 204
             GLG+II N +G++MAAA  +     +V+ AE  A VEG+ LA + G+
Sbjct: 1022 AGLGIIIHNDRGQVMAAATKYLENIQSVDMAEAIAAVEGLQLASEIGM 1061

BLAST of Lcy09g015450 vs. ExPASy TrEMBL
Match: A0A2N9H1N4 (RNase H domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS33433 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 5.8e-15
Identity = 72/252 (28.57%), Postives = 111/252 (44.05%), Query Frame = 0

Query: 2    LNIPNKLKIFAWRASLNILPTRMNLVNRRVHNDPRCLNVGKQMKQRFILYRPARRFQ--- 61
            LN+P K + F WRA  N LPTR NL +R + +DPRC    KQ++         ++ Q   
Sbjct: 1258 LNVPPKTRHFLWRACHNSLPTRSNLHHRHILDDPRCTICSKQLESTIHALWQCKKVQSVW 1317

Query: 62   -------------------------EKLSSGDMAIFVAILWSIWNNRNKVVFQGNWNNYQ 121
                                       LS+ ++ +F  I WSIW  RN++  Q + +N  
Sbjct: 1318 KSISWGQQLAESTYTDFIDLLHKCFSLLSTSELQLFSMICWSIWYRRNRLRLQQSVDNDL 1377

Query: 122  QEDDPLDWASDYILEFMEAQTKHHGNRERSRKAADDSRQVECVLQPQNQFKLNVGASL-- 181
            Q    +  A D + EF EAQ +     ++  +    S  V+     Q ++K+N   ++  
Sbjct: 1378 Q---LVQRARDSMSEFQEAQDR----EQQLPQQPSSSATVKWNPPAQGRYKVNYDGAIFS 1437

Query: 182  ANGEMGLGMIIRNSKGEMMAAAENFRGTSCTVEWAETQALVEGVHLAMDSGLSLVWAEMD 224
             +   G+G+IIRN +GE+M +         +VE  E  A    +  A D G + +  E D
Sbjct: 1438 DSNAAGIGVIIRNHQGEVMGSLSQRFPFPHSVEAVEASAARSAIQFARDLGFTKIDLEGD 1497

BLAST of Lcy09g015450 vs. ExPASy TrEMBL
Match: A0A2N9HG19 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS38757 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 9.9e-15
Identity = 77/228 (33.77%), Postives = 111/228 (48.68%), Query Frame = 0

Query: 2    LNIPNKLKIFAWRASLNILPTRMNLVNRRVHNDPRCLNV--GKQMK-QRFILYRPARRFQ 61
            L IP K++ F WRA    LPTR NL +R V +DP C +   G  +K ++++ +       
Sbjct: 1323 LQIPVKIRHFLWRACHESLPTRKNLHHRHVQDDPLCASFPWGHPLKAEQYLDFMELMHCC 1382

Query: 62   EK-LSSGDMAIFVAILWSIWNNRNKVVFQGNWNNYQQE--DDPLDWASDYILEFMEAQTK 121
             K LSS ++ +F  I WSIW  RN +     W N   +  D  L  A   + EF+EAQ  
Sbjct: 1383 IKLLSSSNLQLFAVITWSIWYRRNCL-----WRNQPTDSIDQLLHRAQRILTEFLEAQ-- 1442

Query: 122  HHGNRERSRKAADDSRQVECVLQP--QNQFKLNV-GASLA-NGEMGLGMIIRNSKGEMMA 181
                   +    +    +E   +P    ++K+N  GA  A   E G+G+IIRN KGE MA
Sbjct: 1443 ----ETPNLPTRNTEHPIEVKWKPPQPGRYKINYDGAMFAETNEAGIGVIIRNHKGEAMA 1502

Query: 182  AAENFRGTSCTVEWAETQALVEGVHLAMDSGLSLVWAEMDSKIVWNLL 220
            +  +      +VE  E  A      LA+D G++ V  E DSK + N L
Sbjct: 1503 SMCHSIHYPHSVEAMEAYAARSAAQLAIDLGITEVDIEGDSKTIVNAL 1539

BLAST of Lcy09g015450 vs. ExPASy TrEMBL
Match: A0A5C7H0P0 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_022911 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 1.4e-13
Identity = 76/251 (30.28%), Postives = 109/251 (43.43%), Query Frame = 0

Query: 3   NIPNKLKIFAWRASLNILPTRMNLVNRRV---------HNDPRCLN-------------- 62
           NIPNK KIF W+A    LPT   L  RRV         ++D   +               
Sbjct: 124 NIPNKCKIFFWKAFNGWLPTFATLARRRVDVVDYCQVCNDDSESITHILWSCNSAVEVWR 183

Query: 63  --VGKQMKQRFILYRPARRFQEKLSSGDMAIFVAIL---WSIWNNRNKVVF-QGNWNNYQ 122
             +G  + QR ++            S D  +F  ++   W +W NRN VV     W    
Sbjct: 184 QLLGDDVIQRIVVSDFPSIILSLWRSVDSVVFNLLIIGYWRLWTNRNSVVHGSAGW---- 243

Query: 123 QEDDPLDWASDYILEFMEAQTKHHGNRERSRKAADDSRQVECVLQPQNQFKLNVGAS--L 182
              D + W  ++  EF  A   +H            S Q       + +FK+N  AS  L
Sbjct: 244 AAADMVTWIDNFANEFRLANELNHKEVL--------SHQPSWKTPKRGEFKINCDASFQL 303

Query: 183 ANGEMGLGMIIRNSKGEMMAAAENFRGTSCTVEWAETQALVEGVHLAMDSGLSLVWAEMD 223
            +G+ G+G+IIR+ KG  +AA  +      +VE  E QA +EG+HLA+D G+S V  E D
Sbjct: 304 RSGKAGVGVIIRDYKGSAIAARSSPVLCCSSVEMLEAQACLEGIHLAIDIGVSGVIIESD 362

BLAST of Lcy09g015450 vs. ExPASy TrEMBL
Match: A0A6J1CDQ4 (uncharacterized protein LOC111010533 OS=Momordica charantia OX=3673 GN=LOC111010533 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 7.1e-13
Identity = 60/191 (31.41%), Postives = 95/191 (49.74%), Query Frame = 0

Query: 55  RRFQEKLSSGDMAIFVAILWSIWNNRNKVVFQGNWNNYQQEDDPL-DWASDYILEFMEAQ 114
           R +++ L+  D    V  LWS+WN RN  VF    N  + EDD L  W S YI  F    
Sbjct: 6   RDWRDMLNWKDFEELVVFLWSLWNRRNAFVF----NKRRVEDDDLAGWVSTYIATFKATN 65

Query: 115 TKHHGNRERSRKAADDSRQVECVLQPQNQ----------FKLNVGASLANGEMGLGM--- 174
           T H    +   ++   S Q+    Q QN           FKL   AS ++ +   G+   
Sbjct: 66  TNHATANQDVSQSFQQSSQIH---QAQNHTIWCPAEEGVFKLKTDASFSSIDFNAGLGVI 125

Query: 175 IIRNSKGEMMAAAENFRGTSCTVEWAETQALVEGVHLAMDSGLSLVWAEMDSKIVWNLLY 232
           IIR+ +G+++A+A  +     +V+ AE  A VEG+ +AM++G+S +  E DS  ++NL  
Sbjct: 126 IIRDHRGQVLASATKYLEHVASVDDAEALAAVEGLRVAMETGISPILLETDSLRIYNLFA 185

BLAST of Lcy09g015450 vs. NCBI nr
Match: XP_022150918.1 (uncharacterized protein LOC111018954 [Momordica charantia])

HSP 1 Score: 94.0 bits (232), Expect = 1.8e-15
Identity = 67/228 (29.39%), Postives = 106/228 (46.49%), Query Frame = 0

Query: 2    LNIPNKLKIFAWRASLNILPTRMNLVNRRVHNDPRCLNVGKQ------------------ 61
            ++IPNK+K+F WR  L+ LPT  NL  R V     C   G+                   
Sbjct: 842  MHIPNKIKVFLWRLCLDRLPTGCNLSKRGVEITNCCYFCGRNGEDSIHLFWICKFAEALW 901

Query: 62   MKQRFILYRP---ARRFQEKLSSGDMAIFVAILWSIWNNRNKVVFQGNWNN-YQQEDDPL 121
            +  +F    P    R   E LS  D      ++W +WN RN   F  +    ++   + +
Sbjct: 902  INSKFGKLSPFLILRESHESLSKADFEELCVVIWGLWNQRNARAFNDSTKTVFKIGMELV 961

Query: 122  DWASDYILEFMEAQTKHHGNRERSRKAADDSRQVECVLQPQNQ--FKLNVGASL--ANGE 181
            +WA+ Y +EF EA++     R         +   E + QP ++  +K+N  AS   ++  
Sbjct: 962  EWANKYAMEFREAKSNPITGRV--------TNTAEILWQPPDEGIYKINTDASFLASDQH 1021

Query: 182  MGLGMIIRNSKGEMMAAAENFRGTSCTVEWAETQALVEGVHLAMDSGL 204
             GLG+II N +G++MAAA  +     +V+ AE  A VEG+ LA + G+
Sbjct: 1022 AGLGIIIHNDRGQVMAAATKYLENIQSVDMAEAIAAVEGLQLASEIGM 1061

BLAST of Lcy09g015450 vs. NCBI nr
Match: XP_015382877.1 (uncharacterized protein LOC107175700 [Citrus sinensis])

HSP 1 Score: 92.4 bits (228), Expect = 5.4e-15
Identity = 75/257 (29.18%), Postives = 126/257 (49.03%), Query Frame = 0

Query: 3   NIPNKLKIFAWRASLNILPTRMNLVNRRVHND---PRCLNVGKQMKQRFILYRPARR--- 62
           ++P K+KIF WRA+ N+LPT  NL  RRV  D    RC   G+ +    I    A+R   
Sbjct: 73  DLPEKVKIFIWRAAQNLLPTVGNLWRRRVVKDYFCQRCNCRGEDVFHALIECMAAKRVWK 132

Query: 63  ------------FQEKLS----------SGDMAIFVAILWSIWNNRNKVVFQGNWNNYQQ 122
                       +Q+ LS            ++ + VA+ W+IW +RN++VF+G      +
Sbjct: 133 LTEFYEDVKQLAWQDMLSVLQVLTVKRKKNELELVVAVCWAIWYSRNRLVFEG------K 192

Query: 123 EDDPLDWASDYILEFMEAQTKHHGNRERSRKAADDSRQVECVLQPQNQFKLNVGASL--A 182
           E+DP +  +  I   +E+  +     E++        Q+E    P+  +K+NV A++  +
Sbjct: 193 EEDPKNSVARAI-AMVESYMRIKVPNEQNSSGHSRISQLEWANPPKGCYKVNVDAAINVS 252

Query: 183 NGEMGLGMIIRNSKGEMMAAAENFRGTSCTVEWAETQALVEGVHLAMDSGLSLVWAEMDS 230
           N + GLG++IRNS G+++AAA         V   E +A++ G+  A  + +  +  E DS
Sbjct: 253 NQKAGLGVVIRNSVGKVVAAAVQGAPYRGDVACMEAEAVLFGIQSAQQAAVFPIIIESDS 312

BLAST of Lcy09g015450 vs. NCBI nr
Match: XP_030958792.1 (uncharacterized protein LOC115980708 [Quercus lobata])

HSP 1 Score: 91.3 bits (225), Expect = 1.2e-14
Identity = 69/228 (30.26%), Postives = 104/228 (45.61%), Query Frame = 0

Query: 4   IPNKLKIFAWRASLNILPTRMNLVNRRVHNDPRCLNVGKQMKQRFILYRPARRFQEKLSS 63
           +P+K+KIF+WRA LNILPT+ NL+ RRV  + RC    ++ +              KLS 
Sbjct: 76  VPSKIKIFSWRACLNILPTQDNLIRRRVMENARCCLCHQETETL------VTGLLVKLSK 135

Query: 64  GDMAIFVAILWSIWNNRNKVVFQGNWNNYQQEDDPLDWASDYILEFMEAQTKHHGNRERS 123
            +  +F    W IW+ RN V+  G    +Q        A DY+ E+  AQ   H      
Sbjct: 136 EEWNLFWITCWLIWHQRNTVIHGG---VFQHPSRSAQRAVDYLKEYTAAQDSSHVPIPNL 195

Query: 124 RKAADDSRQVECVLQPQNQFKLNV-GASLANGE-MGLGMIIRNSKGEMMAAAENFRGTSC 183
                   Q      P+  FKLN   A    G+  G G +IRN KG++MAA     G   
Sbjct: 196 GPG-----QQTWQPPPETFFKLNFDSACFDEGDASGYGAVIRNEKGDIMAALAVRGGAVR 255

Query: 184 TVEWAETQALVEGVHLAMDSGLSLVWAEMDSKIVWNLLYDREQYLNEI 230
             E  E  A  + +  A+D G + +  E D+ +V  ++   +  L+++
Sbjct: 256 DSEEVEVMACRKALEFAIDVGFTEIVLEGDNALVMKMITQAQPELSQL 289

BLAST of Lcy09g015450 vs. NCBI nr
Match: XP_024950112.1 (uncharacterized protein LOC112496847 [Citrus sinensis])

HSP 1 Score: 88.6 bits (218), Expect = 7.8e-14
Identity = 73/261 (27.97%), Postives = 120/261 (45.98%), Query Frame = 0

Query: 2    LNIPNKLKIFAWRASLNILPTRMNLVNRRVHNDPRC-------------LNVGKQMKQRF 61
            L +P KLKIF WRAS N+LP+  NL  R+V  +P C             L   K  ++ +
Sbjct: 1080 LELPEKLKIFMWRASNNLLPSAENLWKRKVVEEPTCKRCKLSVETISHALLECKAARKIW 1139

Query: 62   I---------------LYRPARRFQEKLSSGDMAIFVAILWSIWNNRNKVVFQGNWNNYQ 121
            +               ++   +   ++L   D+ + VA+ WS W  RNK +F G      
Sbjct: 1140 LQSPFSAPRLEANSQDIFSTLQNMAKELRKSDLELMVALCWSAWYARNKCIFDG------ 1199

Query: 122  QEDDPL---DWASDYILEFMEAQTKHHGNRERSRKAADDSRQVECVLQPQNQFKLNVGAS 181
            +E +P+     A   +  F   +     +   S K     +Q E +  PQN FK+NV A+
Sbjct: 1200 RELNPIISAAKAESVLTAFQRVRKPQQSHISISIK----EKQQEWLPPPQNVFKVNVDAA 1259

Query: 182  L--ANGEMGLGMIIRNSKGEMMAAAENFRGTSCTVEWAETQALVEGVHLAMDSGLSLVWA 230
                N   G+G +IR+S G+++AA  N      +   AE +A++ G+ LA ++ +S +  
Sbjct: 1260 FNSKNLSAGVGAVIRDSNGKIVAAGVNQNLLKGSASLAEAEAVLWGLQLARNADVSSLII 1319

BLAST of Lcy09g015450 vs. NCBI nr
Match: XP_024046693.1 (uncharacterized protein LOC112101029 [Citrus clementina])

HSP 1 Score: 87.4 bits (215), Expect = 1.7e-13
Identity = 74/257 (28.79%), Postives = 123/257 (47.86%), Query Frame = 0

Query: 3   NIPNKLKIFAWRASLNILPTRMNLVNRRVHNDPRCLNV---GKQMKQRFILYRPARR--- 62
           ++P K+KIF WRA+ N+LPT  NL  RRV  D  C      G+ +    I  R A+R   
Sbjct: 19  DLPEKVKIFIWRAAQNLLPTVGNLWRRRVVKDYFCQICNCRGEDVFHALIECRAAKRVWK 78

Query: 63  ---FQE-------------------KLSSGDMAIFVAILWSIWNNRNKVVFQGNWNNYQQ 122
              F E                   K    ++ + VA+ W+IW +RN++VF+G      +
Sbjct: 79  LTEFYEDVTQLAPQDMLSVLQDLTVKRKKNELELVVAVCWAIWYSRNRLVFEG------K 138

Query: 123 EDDPLDWASDYILEFMEAQTKHHGNRERSRKAADDSRQVECVLQPQNQFKLNVGASL--A 182
           E+ P +  +  I   +E+  +     E++        Q+E    P+  +K+NV A++  +
Sbjct: 139 EEYPKNSVARAI-AMVESYRRIKVPNEQNSPGHSRISQLEWANPPKGCYKVNVDAAINVS 198

Query: 183 NGEMGLGMIIRNSKGEMMAAAENFRGTSCTVEWAETQALVEGVHLAMDSGLSLVWAEMDS 230
           N + GLG++IRNS G+++AAA         V   E +A++ G+  A  + +  +  E DS
Sbjct: 199 NQKAGLGVVIRNSVGKVVAAAVQGAPYRGDVACMEAEAVLFGIQSAQQAAVFPIIIESDS 258

BLAST of Lcy09g015450 vs. TAIR 10
Match: AT5G65005.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 43.9 bits (102), Expect = 2.0e-04
Identity = 39/155 (25.16%), Postives = 65/155 (41.94%), Query Frame = 0

Query: 72  ILWSIWNNRNKVVFQGNWNNYQQE-----DDPLDWASDYILEFMEAQTKHHGNRERSRKA 131
           ++W IW + N +VF      +Q       +D  +W     L+      + +GNR      
Sbjct: 47  LMWRIWKSGNDLVFNHTRTKFQTTVEMALNDTKEW-----LDNTMTNEQQNGNRN----- 106

Query: 132 ADDSRQVECVLQPQNQFKLNVGAS--LANGEMGLGMIIRNSKGEMMAAAENFRGTSCTVE 191
           AD SR  +     +++ K N  AS    N   GLG I+RNS+G ++           T E
Sbjct: 107 ADPSRNTKWSPPGRDKLKCNYDASHHERNTVSGLGWILRNSQGTVIECGMGKFQGRMTTE 166

Query: 192 WAETQALVEGVHLAMDSGLSLVWAEMDSKIVWNLL 220
            AE   L+  +  +   G   V  E D++ +  ++
Sbjct: 167 EAECSTLIWAIQASYGFGHKKVIFEGDNQTITRMI 191

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DAR48.9e-1629.39uncharacterized protein LOC111018954 OS=Momordica charantia OX=3673 GN=LOC111018... [more]
A0A2N9H1N45.8e-1528.57RNase H domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS33433 ... [more]
A0A2N9HG199.9e-1533.77Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS38757 PE=4 SV=1[more]
A0A5C7H0P01.4e-1330.28Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_022911 PE=4 SV=1[more]
A0A6J1CDQ47.1e-1331.41uncharacterized protein LOC111010533 OS=Momordica charantia OX=3673 GN=LOC111010... [more]
Match NameE-valueIdentityDescription
XP_022150918.11.8e-1529.39uncharacterized protein LOC111018954 [Momordica charantia][more]
XP_015382877.15.4e-1529.18uncharacterized protein LOC107175700 [Citrus sinensis][more]
XP_030958792.11.2e-1430.26uncharacterized protein LOC115980708 [Quercus lobata][more]
XP_024950112.17.8e-1427.97uncharacterized protein LOC112496847 [Citrus sinensis][more]
XP_024046693.11.7e-1328.79uncharacterized protein LOC112101029 [Citrus clementina][more]
Match NameE-valueIdentityDescription
AT5G65005.12.0e-0425.16Polynucleotidyl transferase, ribonuclease H-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002156Ribonuclease H domainPFAMPF13456RVT_3coord: 154..225
e-value: 6.2E-13
score: 48.6
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 146..228
e-value: 1.5E-6
score: 30.3
NoneNo IPR availablePANTHERPTHR46736FAMILY NOT NAMEDcoord: 2..220
NoneNo IPR availablePANTHERPTHR46736:SF6SUBFAMILY NOT NAMEDcoord: 2..220
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 149..222

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy09g015450.1Lcy09g015450.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004523 RNA-DNA hybrid ribonuclease activity