Lcy09g014980 (gene) Sponge gourd (P93075) v1

Overview
NameLcy09g014980
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionReverse transcriptase domain-containing protein
LocationChr09: 20068559 .. 20069209 (+)
RNA-Seq ExpressionLcy09g014980
SyntenyLcy09g014980
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTGGAGATGGGAAATGGACAAACAATGTTAAAGAGATGGGGGAAGTAGCTTCAAAGTACTTCAAAAATACGTTCTCTTCTTCCAACCCATCCAAGGAAGCAATAGACGAAATTGTGGGGTGTTTGCCGAACAAAGTCTCTAAAGACCAGGTTAGAGAATTGGAAAGACCGTTCACCAGTGAGGAAATTGAATGGGCAATTAAGAATATGAATCCAAGTAAGGGCTCAGGTCCTGATGGGGCCCATGCCATGTTCTTTCAGAAGTATTGGAATGAGATAAAAGCTGACTTTGTGCCCATTTGTATGGAGATCTTGAATAATGGCAAGGATATGAGGCCTATTAATAACACCTTCATCACTCTTATCCCTAAGTCTAAGAAGCCTAAGAGAATGGAGGAATTCATACCCATTAGTCTTTGTAATGTCATCTACAAAGTGGTGGCTAAGGTTATTGCTAATAGGCTAAAAAAAGTCTTGGATACCATCATATCCCAAACTCAATCTGCCTTTGTCCCGGGCCGCTTGATCACTGATAATGTGGTGGTAGGGTTCGAATGTATCCATGCTATCAACAACAGAAGAACTGGGAAATCAGGCCTGGCAGCTCTTAAACTCGATATGAGTAAAGCTTATGATCGAGTGGAATGA

mRNA sequence

ATGTCTGGAGATGGGAAATGGACAAACAATGTTAAAGAGATGGGGGAAGTAGCTTCAAAGTACTTCAAAAATACGTTCTCTTCTTCCAACCCATCCAAGGAAGCAATAGACGAAATTGTGGGGTGTTTGCCGAACAAAGTCTCTAAAGACCAGGTTAGAGAATTGGAAAGACCGTTCACCAGTGAGGAAATTGAATGGGCAATTAAGAATATGAATCCAAGTAAGGGCTCAGGTCCTGATGGGGCCCATGCCATGTTCTTTCAGAAGTATTGGAATGAGATAAAAGCTGACTTTGTGCCCATTTGTATGGAGATCTTGAATAATGGCAAGGATATGAGGCCTATTAATAACACCTTCATCACTCTTATCCCTAAGTCTAAGAAGCCTAAGAGAATGGAGGAATTCATACCCATTAGTCTTTGTAATGTCATCTACAAAGTGGTGGCTAAGGTTATTGCTAATAGGCTAAAAAAAGTCTTGGATACCATCATATCCCAAACTCAATCTGCCTTTGTCCCGGGCCGCTTGATCACTGATAATGTGGTGGTAGGGTTCGAATGTATCCATGCTATCAACAACAGAAGAACTGGGAAATCAGGCCTGGCAGCTCTTAAACTCGATATGAGTAAAGCTTATGATCGAGTGGAATGA

Coding sequence (CDS)

ATGTCTGGAGATGGGAAATGGACAAACAATGTTAAAGAGATGGGGGAAGTAGCTTCAAAGTACTTCAAAAATACGTTCTCTTCTTCCAACCCATCCAAGGAAGCAATAGACGAAATTGTGGGGTGTTTGCCGAACAAAGTCTCTAAAGACCAGGTTAGAGAATTGGAAAGACCGTTCACCAGTGAGGAAATTGAATGGGCAATTAAGAATATGAATCCAAGTAAGGGCTCAGGTCCTGATGGGGCCCATGCCATGTTCTTTCAGAAGTATTGGAATGAGATAAAAGCTGACTTTGTGCCCATTTGTATGGAGATCTTGAATAATGGCAAGGATATGAGGCCTATTAATAACACCTTCATCACTCTTATCCCTAAGTCTAAGAAGCCTAAGAGAATGGAGGAATTCATACCCATTAGTCTTTGTAATGTCATCTACAAAGTGGTGGCTAAGGTTATTGCTAATAGGCTAAAAAAAGTCTTGGATACCATCATATCCCAAACTCAATCTGCCTTTGTCCCGGGCCGCTTGATCACTGATAATGTGGTGGTAGGGTTCGAATGTATCCATGCTATCAACAACAGAAGAACTGGGAAATCAGGCCTGGCAGCTCTTAAACTCGATATGAGTAAAGCTTATGATCGAGTGGAATGA

Protein sequence

MSGDGKWTNNVKEMGEVASKYFKNTFSSSNPSKEAIDEIVGCLPNKVSKDQVRELERPFTSEEIEWAIKNMNPSKGSGPDGAHAMFFQKYWNEIKADFVPICMEILNNGKDMRPINNTFITLIPKSKKPKRMEEFIPISLCNVIYKVVAKVIANRLKKVLDTIISQTQSAFVPGRLITDNVVVGFECIHAINNRRTGKSGLAALKLDMSKAYDRVE
Homology
BLAST of Lcy09g014980 vs. ExPASy Swiss-Prot
Match: P14381 (Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 5.6e-25
Identity = 76/213 (35.68%), Postives = 115/213 (53.99%), Query Frame = 0

Query: 4   DGKWTNNVKEMGEVASKYFKNTFSSSNPSKEAIDEIVGCLPNKVSKDQVRELERPFTSEE 63
           DG    + + + + A  +++N FS    S +A +E+   LP  VS+ +   LE P T +E
Sbjct: 395 DGTPLEDPEAIRDRARSFYQNLFSPDPISPDACEELWDGLP-VVSERRKERLETPITLDE 454

Query: 64  IEWAIKNMNPSKGSGPDGAHAMFFQKYWNEIKADFVPICMEILNNGKDMRPINNTFITLI 123
           +  A++ M  +K  G DG    FFQ +W+ +  DF  +  E    G+         ++L+
Sbjct: 455 LSQALRLMPHNKSPGLDGLTIEFFQFFWDTLGPDFHRVLTEAFKKGELPLSCRRAVLSLL 514

Query: 124 PKSKKPKRMEEFIPISLCNVIYKVVAKVIANRLKKVLDTIISQTQSAFVPGRLITDNVVV 183
           PK    + ++ + P+SL +  YK+VAK I+ RLK VL  +I   QS  VPGR I DNV +
Sbjct: 515 PKKGDLRLIKNWRPVSLLSTDYKIVAKAISLRLKSVLAEVIHPDQSYTVPGRTIFDNVFL 574

Query: 184 GFECIHAINNRRTGKSGLAALKLDMSKAYDRVE 217
             + +H    RRTG S LA L LD  KA+DRV+
Sbjct: 575 IRDLLHFA--RRTGLS-LAFLSLDQEKAFDRVD 603

BLAST of Lcy09g014980 vs. ExPASy Swiss-Prot
Match: P08548 (LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 5.8e-22
Identity = 68/221 (30.77%), Postives = 116/221 (52.49%), Query Frame = 0

Query: 2   SGDGKWTNNVKEMGEVASKYFKNTFSSSNPSKEAIDE-IVGCLPNKVSKDQVRELERPFT 61
           +G+ + T +  E+ ++ ++Y+K  +S    + + ID+ +  C   ++S+ +V  L RP +
Sbjct: 394 NGNDEITTDPSEIQKILNEYYKKLYSHKYENLKEIDQYLEACHLPRLSQKEVEMLNRPIS 453

Query: 62  SEEIEWAIKNMNPSKGSGPDGAHAMFFQKYWNEIKADFVPICMEILNNGKDMRPINNTF- 121
           S EI   I+N+   K  GPDG  + F+Q +    K + VPI + +  N +    + NTF 
Sbjct: 454 SSEIASTIQNLPKKKSPGPDGFTSEFYQTF----KEELVPILLNLFQNIEKEGILPNTFY 513

Query: 122 ---ITLIPK-SKKPKRMEEFIPISLCNVIYKVVAKVIANRLKKVLDTIISQTQSAFVPGR 181
              ITLIPK  K P R E + PISL N+  K++ K++ NR+++ +  II   Q  F+PG 
Sbjct: 514 EANITLIPKPGKDPTRKENYRPISLMNIDAKILNKILTNRIQQHIKKIIHHDQVGFIPGS 573

Query: 182 LITDNVVVGFECIHAINNRRTGKSGLAALKLDMSKAYDRVE 217
               N+      I  IN  +     +  L +D  KA+D ++
Sbjct: 574 QGWFNIRKSINVIQHINKLKNKDHMI--LSIDAEKAFDNIQ 608

BLAST of Lcy09g014980 vs. ExPASy Swiss-Prot
Match: P11369 (LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE=1 SV=2)

HSP 1 Score: 101.7 bits (252), Expect = 1.1e-20
Identity = 66/218 (30.28%), Postives = 115/218 (52.75%), Query Frame = 0

Query: 5   GKWTNNVKEMGEVASKYFKNTFSSSNPSKEAIDEIVGCLP-NKVSKDQVRELERPFTSEE 64
           G  T + +E+      ++K  +S+   + + +D+ +      K+++DQV  L  P + +E
Sbjct: 405 GDITTDPEEIQNTIRSFYKRLYSTKLENLDEMDKFLDRYQVPKLNQDQVDHLNSPISPKE 464

Query: 65  IEWAIKNMNPSKGSGPDGAHAMFFQKYWNEIKADFVPICMEILNNGKDMRPINNTF---- 124
           IE  I ++   K  GPDG  A F+Q +    K D +PI  ++ +  +    + N+F    
Sbjct: 465 IEAVINSLPTKKSPGPDGFSAEFYQTF----KEDLIPILHKLFHKIEVEGTLPNSFYEAT 524

Query: 125 ITLIPKSKK-PKRMEEFIPISLCNVIYKVVAKVIANRLKKVLDTIISQTQSAFVPGRLIT 184
           ITLIPK +K P ++E F PISL N+  K++ K++ANR+++ +  II   Q  F+PG    
Sbjct: 525 ITLIPKPQKDPTKIENFRPISLMNIDAKILNKILANRIQEHIKAIIHPDQVGFIPGMQGW 584

Query: 185 DNVVVGFECIHAINNRRTGKSGLAALKLDMSKAYDRVE 217
            N+      IH IN  +     +  + LD  KA+D+++
Sbjct: 585 FNIRKSINVIHYINKLKDKNHMI--ISLDAEKAFDKIQ 616

BLAST of Lcy09g014980 vs. ExPASy Swiss-Prot
Match: O00370 (LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.5e-17
Identity = 62/219 (28.31%), Postives = 111/219 (50.68%), Query Frame = 0

Query: 5   GKWTNNVKEMGEVASKYFKNTFSSSNPSKEAIDEIVG--CLPNKVSKDQVRELERPFTSE 64
           G  T +  E+     +Y+K+ +++   + E +D  +    LP ++++++V  L RP T  
Sbjct: 398 GDITTDPTEIQTTIREYYKHLYANKLENLEEMDTFLDTYTLP-RLNQEEVESLNRPITGS 457

Query: 65  EIEWAIKNMNPSKGSGPDGAHAMFFQKYWNEIKADFVPICMEILNNGKDMRPINNTF--- 124
           EI   I ++   K  GPDG  A F+Q+Y    K + VP  +++  + +    + N+F   
Sbjct: 458 EIVAIINSLPTKKSPGPDGFTAEFYQRY----KEELVPFLLKLFQSIEKEGILPNSFYEA 517

Query: 125 -ITLIPK-SKKPKRMEEFIPISLCNVIYKVVAKVIANRLKKVLDTIISQTQSAFVPGRLI 184
            I LIPK  +   + E F PISL N+  K++ K++ANR+++ +  +I   Q  F+PG   
Sbjct: 518 SIILIPKPGRDTTKKENFRPISLMNIDAKILNKILANRIQQHIKKLIHHDQVGFIPGMQG 577

Query: 185 TDNVVVGFECIHAINNRRTGKSGLAALKLDMSKAYDRVE 217
             N+      I  IN  R        + +D  KA+D+++
Sbjct: 578 WFNIRKSINVIQHIN--RAKDKNHVIISIDAEKAFDKIQ 609

BLAST of Lcy09g014980 vs. ExPASy TrEMBL
Match: A0A2N9IBV7 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS49442 PE=4 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 1.0e-53
Identity = 109/215 (50.70%), Postives = 150/215 (69.77%), Query Frame = 0

Query: 2   SGDGKWTNNVKEMGEVASKYFKNTFSSSNPSKEAIDEIVGCLPNKVSKDQVRELERPFTS 61
           + D  W  +  ++ ++A  YF + F +S P    +++ +  + ++V+ +  + L +PFT+
Sbjct: 728 NSDNVWCTDESQIEDIAVSYFDDIFHTSTPVN--LEDTLTAVNSRVTPEVNQRLLQPFTA 787

Query: 62  EEIEWAIKNMNPSKGSGPDGAHAMFFQKYWNEIKADFVPICMEILNNGKDMRPINNTFIT 121
           +E+  A+  M+PSK  GPDG  + FFQKYWN + AD V   + +LN+GK +R IN T I+
Sbjct: 788 DEVRMALFQMHPSKAPGPDGMSSFFFQKYWNIVGADVVAAVLSVLNSGKILRKINLTHIS 847

Query: 122 LIPKSKKPKRMEEFIPISLCNVIYKVVAKVIANRLKKVLDTIISQTQSAFVPGRLITDNV 181
           LIPK K P+RM E+ PISLCNV+YK+++KV+ANRLK VL  IIS +QSAFVPGRLITDNV
Sbjct: 848 LIPKKKNPERMSEYRPISLCNVVYKIISKVLANRLKVVLPCIISDSQSAFVPGRLITDNV 907

Query: 182 VVGFECIHAINNRRTGKSGLAALKLDMSKAYDRVE 217
            V FE IH +  +R GK G  ALKLDMSKAYDRVE
Sbjct: 908 SVAFEFIHKMKAKRKGKKGEMALKLDMSKAYDRVE 940

BLAST of Lcy09g014980 vs. ExPASy TrEMBL
Match: A0A2N9HKS5 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS40714 PE=4 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 1.0e-53
Identity = 109/215 (50.70%), Postives = 150/215 (69.77%), Query Frame = 0

Query: 2   SGDGKWTNNVKEMGEVASKYFKNTFSSSNPSKEAIDEIVGCLPNKVSKDQVRELERPFTS 61
           + D  W  +  ++ ++A  YF + F +S P    +++ +  + ++V+ +  + L +PFT+
Sbjct: 672 NSDNVWCTDESQIEDIAVSYFDDIFHTSTPVN--LEDTLTAVNSRVTPEVNQRLLQPFTA 731

Query: 62  EEIEWAIKNMNPSKGSGPDGAHAMFFQKYWNEIKADFVPICMEILNNGKDMRPINNTFIT 121
           +E+  A+  M+PSK  GPDG  + FFQKYWN + AD V   + +LN+GK +R IN T I+
Sbjct: 732 DEVRMALFQMHPSKAPGPDGMSSFFFQKYWNIVGADVVAAVLSVLNSGKILRKINLTHIS 791

Query: 122 LIPKSKKPKRMEEFIPISLCNVIYKVVAKVIANRLKKVLDTIISQTQSAFVPGRLITDNV 181
           LIPK K P+RM E+ PISLCNV+YK+++KV+ANRLK VL  IIS +QSAFVPGRLITDNV
Sbjct: 792 LIPKKKNPERMSEYRPISLCNVVYKIISKVLANRLKVVLPCIISDSQSAFVPGRLITDNV 851

Query: 182 VVGFECIHAINNRRTGKSGLAALKLDMSKAYDRVE 217
            V FE IH +  +R GK G  ALKLDMSKAYDRVE
Sbjct: 852 SVAFEFIHKMKAKRKGKKGEMALKLDMSKAYDRVE 884

BLAST of Lcy09g014980 vs. ExPASy TrEMBL
Match: A0A2N9GPZ7 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS29430 PE=4 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 2.9e-53
Identity = 108/213 (50.70%), Postives = 148/213 (69.48%), Query Frame = 0

Query: 4   DGKWTNNVKEMGEVASKYFKNTFSSSNPSKEAIDEIVGCLPNKVSKDQVRELERPFTSEE 63
           DG W     ++ E+A  YF+  F+SSNPS E+I  ++  + + V+     +L+  FT +E
Sbjct: 248 DGVWQTEKTKIAEIAVDYFQGIFTSSNPSAESITTVLQGMESVVTNAMNDQLQAEFTKDE 307

Query: 64  IEWAIKNMNPSKGSGPDGAHAMFFQKYWNEIKADFVPICMEILNNGKDMRPINNTFITLI 123
           +  A+K M P+K  GPDG  A+F+Q YW+ +  +     + IL++G  +R IN T I LI
Sbjct: 308 VSLALKQMYPTKAPGPDGMSAIFYQTYWDIVGPEVTQAILSILHSGYMLRKINYTHIALI 367

Query: 124 PKSKKPKRMEEFIPISLCNVIYKVVAKVIANRLKKVLDTIISQTQSAFVPGRLITDNVVV 183
           PK K P+ + +F PISLCNVIYK+V+KV+ANRLKKVL  +IS+ QSAFVPGRLITDNV+V
Sbjct: 368 PKVKNPENITDFRPISLCNVIYKIVSKVLANRLKKVLPFVISEAQSAFVPGRLITDNVLV 427

Query: 184 GFECIHAINNRRTGKSGLAALKLDMSKAYDRVE 217
            FE +H+++ +R GK G  ALKLDMSKAYDRVE
Sbjct: 428 AFEVMHSMSLKRKGKKGQMALKLDMSKAYDRVE 460

BLAST of Lcy09g014980 vs. ExPASy TrEMBL
Match: A0A2N9IPS8 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS55418 PE=4 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 2.9e-53
Identity = 108/213 (50.70%), Postives = 148/213 (69.48%), Query Frame = 0

Query: 4    DGKWTNNVKEMGEVASKYFKNTFSSSNPSKEAIDEIVGCLPNKVSKDQVRELERPFTSEE 63
            DG W     ++ E+A  YF+  F+SSNPS E+I  ++  + + V+     +L+  FT +E
Sbjct: 823  DGVWQTEKTKIAEIAVDYFQGIFTSSNPSAESITTVLQGMESVVTNAMNDQLQAEFTKDE 882

Query: 64   IEWAIKNMNPSKGSGPDGAHAMFFQKYWNEIKADFVPICMEILNNGKDMRPINNTFITLI 123
            +  A+K M P+K  GPDG  A+F+Q YW+ +  +     + IL++G  +R IN T I LI
Sbjct: 883  VSLALKQMYPTKAPGPDGMSAIFYQTYWDIVGPEVTQAILSILHSGYMLRKINYTHIALI 942

Query: 124  PKSKKPKRMEEFIPISLCNVIYKVVAKVIANRLKKVLDTIISQTQSAFVPGRLITDNVVV 183
            PK K P+ + +F PISLCNVIYK+V+KV+ANRLKKVL  +IS+ QSAFVPGRLITDNV+V
Sbjct: 943  PKVKNPENITDFRPISLCNVIYKIVSKVLANRLKKVLPFVISEAQSAFVPGRLITDNVLV 1002

Query: 184  GFECIHAINNRRTGKSGLAALKLDMSKAYDRVE 217
             FE +H+++ +R GK G  ALKLDMSKAYDRVE
Sbjct: 1003 AFEVMHSMSLKRKGKKGQMALKLDMSKAYDRVE 1035

BLAST of Lcy09g014980 vs. ExPASy TrEMBL
Match: A0A2N9GIC4 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS27062 PE=4 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 6.5e-53
Identity = 105/211 (49.76%), Postives = 152/211 (72.04%), Query Frame = 0

Query: 6   KWTNNVKEMGEVASKYFKNTFSSSNPSKEAIDEIVGCLPNKVSKDQVRELERPFTSEEIE 65
           KW +    M  +  KY+ + FS+S+P  + I E+V  +P+ V++D  + L R FT+ E+E
Sbjct: 726 KWHDTNDGMASLLIKYYTSLFSTSHP--DQIAEVVTHVPHVVTEDMNKALIRKFTAPEVE 785

Query: 66  WAIKNMNPSKGSGPDGAHAMFFQKYWNEIKADFVPICMEILNNGKDMRPINNTFITLIPK 125
            A+K M P+K  GPDG   +F+QK+W+ +  D     +  LN+G+ ++ IN+TFI+LIPK
Sbjct: 786 LALKQMAPTKAPGPDGMPPVFYQKFWHVVGGDVTKAVLSCLNSGRILKSINHTFISLIPK 845

Query: 126 SKKPKRMEEFIPISLCNVIYKVVAKVIANRLKKVLDTIISQTQSAFVPGRLITDNVVVGF 185
           +K P+R+ EF PISLCNVIYK+++KV+ANRLK +L  ++S +QSAFVPGRLITDNV+V F
Sbjct: 846 TKNPERVTEFRPISLCNVIYKLISKVLANRLKLILPQVVSDSQSAFVPGRLITDNVLVAF 905

Query: 186 ECIHAINNRRTGKSGLAALKLDMSKAYDRVE 217
           E +H +++ + G+ G  ALKLDMSKAYDRVE
Sbjct: 906 ETLHYMHHNKIGRDGAMALKLDMSKAYDRVE 934

BLAST of Lcy09g014980 vs. NCBI nr
Match: XP_023881891.1 (uncharacterized protein LOC111994244 [Quercus suber])

HSP 1 Score: 223.8 bits (569), Expect = 1.4e-54
Identity = 108/216 (50.00%), Postives = 153/216 (70.83%), Query Frame = 0

Query: 1   MSGDGKWTNNVKEMGEVASKYFKNTFSSSNPSKEAIDEIVGCLPNKVSKDQVRELERPFT 60
           M  +G W ++ + + +VA  YF+  +SSS P++  I E++  +P  V+++    L + FT
Sbjct: 212 MDENGNWQDSTEGIAKVAVSYFQTIYSSSVPTR--ISEVLDAIPTTVTEEMNHSLIQEFT 271

Query: 61  SEEIEWAIKNMNPSKGSGPDGAHAMFFQKYWNEIKADFVPICMEILNNGKDMRPINNTFI 120
            EEIE A+  M+P+K  GPDG  A+FFQKYWN +  D V + +++LN+   M  IN T I
Sbjct: 272 REEIETALNQMHPTKAPGPDGMSAIFFQKYWNIVGNDIVCMVLDVLNSNMSMVEINKTNI 331

Query: 121 TLIPKSKKPKRMEEFIPISLCNVIYKVVAKVIANRLKKVLDTIISQTQSAFVPGRLITDN 180
           TL+PK K P +M +F PISLCNV+YK+++KV+ANRLK +L  IIS+ QSAF+ GRLITDN
Sbjct: 332 TLVPKIKNPTKMSDFRPISLCNVVYKLISKVLANRLKNILPQIISENQSAFLSGRLITDN 391

Query: 181 VVVGFECIHAINNRRTGKSGLAALKLDMSKAYDRVE 217
           V+V FE +H + +++ GK G AA+KLDMSKAYDRVE
Sbjct: 392 VLVAFELMHYLEHKKEGKEGFAAIKLDMSKAYDRVE 425

BLAST of Lcy09g014980 vs. NCBI nr
Match: XP_030923330.1 (uncharacterized protein LOC115950239 [Quercus lobata])

HSP 1 Score: 221.9 bits (564), Expect = 5.5e-54
Identity = 108/215 (50.23%), Postives = 153/215 (71.16%), Query Frame = 0

Query: 2   SGDGKWTNNVKEMGEVASKYFKNTFSSSNPSKEAIDEIVGCLPNKVSKDQVRELERPFTS 61
           +  G+W  N++E+G+VA+ YF N F +   + + ++E +  +  KV++D    L   FT+
Sbjct: 774 NSQGQWVENLEEVGQVAADYFDNLFQAG--AGDQMEECLDAVDTKVTEDMREFLSNQFTA 833

Query: 62  EEIEWAIKNMNPSKGSGPDGAHAMFFQKYWNEIKADFVPICMEILNNGKDMRPINNTFIT 121
           EE++ A+  M P+K  GPDG +A+F+QK+W+ +    V   ++ LNNG  +  IN+T I 
Sbjct: 834 EEVQAALFQMGPTKAPGPDGMNALFYQKFWHIVGDSVVSAVLDFLNNGNMLPEINHTNIV 893

Query: 122 LIPKSKKPKRMEEFIPISLCNVIYKVVAKVIANRLKKVLDTIISQTQSAFVPGRLITDNV 181
           LIPK + P+RM EF PISLCNVIYK+++KV+ANRLK+VL  IIS TQSAFVPGRLITDNV
Sbjct: 894 LIPKVQNPERMSEFRPISLCNVIYKIISKVLANRLKQVLPQIISSTQSAFVPGRLITDNV 953

Query: 182 VVGFECIHAINNRRTGKSGLAALKLDMSKAYDRVE 217
           +V +E +H ++ R+ GK G  ALKLD+SKAYDRVE
Sbjct: 954 LVAYETLHTMHARKKGKKGDVALKLDISKAYDRVE 986

BLAST of Lcy09g014980 vs. NCBI nr
Match: XP_015388020.1 (uncharacterized protein LOC107177951 [Citrus sinensis])

HSP 1 Score: 217.6 bits (553), Expect = 1.0e-52
Identity = 99/213 (46.48%), Postives = 150/213 (70.42%), Query Frame = 0

Query: 4   DGKWTNNVKEMGEVASKYFKNTFSSSNPSKEAIDEIVGCLPNKVSKDQVRELERPFTSEE 63
           + +W+   +++  +  +Y+ N F+S+NPS++ ++  +  +P+KVS +    L++PFT  +
Sbjct: 241 NNRWSEKAEDIERMFCEYYHNLFTSTNPSQQHLELALRNMPHKVSAEMNSHLDQPFTEAD 300

Query: 64  IEWAIKNMNPSKGSGPDGAHAMFFQKYWNEIKADFVPICMEILNNGKDMRPINNTFITLI 123
           I  A+  M+P+K  GPDG    FFQK+W  +    +  C+ ILN G ++ P+N+TFI LI
Sbjct: 301 ILEALSQMHPTKAPGPDGLPTAFFQKHWASVSEGVIATCLHILNEGGNIAPLNHTFICLI 360

Query: 124 PKSKKPKRMEEFIPISLCNVIYKVVAKVIANRLKKVLDTIISQTQSAFVPGRLITDNVVV 183
            K  KP+ + E+ PISLCNVIY+++AK IANRLK +L+++I  TQSAFVP RLITDN++V
Sbjct: 361 LKIAKPRTVMEYRPISLCNVIYRIIAKTIANRLKLILESVILPTQSAFVPNRLITDNIIV 420

Query: 184 GFECIHAINNRRTGKSGLAALKLDMSKAYDRVE 217
           G+EC+H I + +  K+GL ALKLD+SKAYD VE
Sbjct: 421 GYECLHKIRHSKNKKNGLVALKLDISKAYDMVE 453

BLAST of Lcy09g014980 vs. NCBI nr
Match: XP_023908235.1 (uncharacterized protein LOC112019924 [Quercus suber])

HSP 1 Score: 216.1 bits (549), Expect = 3.0e-52
Identity = 104/215 (48.37%), Postives = 148/215 (68.84%), Query Frame = 0

Query: 2   SGDGKWTNNVKEMGEVASKYFKNTFSSSNPSKEAIDEIVGCLPNKVSKDQVRELERPFTS 61
           S  G W   ++E+  VA+ YF N F + N   + ++E +  +P KV+ +    L   F +
Sbjct: 671 SAQGNWVEEMEEIANVATGYFDNLFCAGN--CDQMEECLNAVPRKVTPEMHDTLSSEFNA 730

Query: 62  EEIEWAIKNMNPSKGSGPDGAHAMFFQKYWNEIKADFVPICMEILNNGKDMRPINNTFIT 121
           EE++ A+  M P+K  GPDG +A+F+QK+W+ +    V   ++ LNNG     IN+T+I 
Sbjct: 731 EEVKLALFQMGPTKAPGPDGMNALFYQKFWHVVGDTVVDAVLDFLNNGHMAPDINHTYIV 790

Query: 122 LIPKSKKPKRMEEFIPISLCNVIYKVVAKVIANRLKKVLDTIISQTQSAFVPGRLITDNV 181
           LIPK K P++M +F PISLCNVIYK+++KV+ NRLK+VL  IIS TQSAFVPGRLITDNV
Sbjct: 791 LIPKVKNPEKMSDFRPISLCNVIYKIISKVLVNRLKQVLPNIISPTQSAFVPGRLITDNV 850

Query: 182 VVGFECIHAINNRRTGKSGLAALKLDMSKAYDRVE 217
           ++ +E +H +++R+ GK G  ALKLD+SKAYDRVE
Sbjct: 851 LLAYETLHTMHSRKKGKKGYMALKLDVSKAYDRVE 883

BLAST of Lcy09g014980 vs. NCBI nr
Match: XP_024044510.1 (uncharacterized protein LOC112100177 [Citrus clementina])

HSP 1 Score: 214.5 bits (545), Expect = 8.8e-52
Identity = 103/213 (48.36%), Postives = 147/213 (69.01%), Query Frame = 0

Query: 4   DGKWTNNVKEMGEVASKYFKNTFSSSNPSKEAIDEIVGCLPNKVSKDQVRELERPFTSEE 63
           +G WT + + +  +   YF N F++S+PS   ++  +  +P KVS +   +L++ FT EE
Sbjct: 240 NGVWTEDAEVVERLFGDYFTNIFTTSSPSPTQLNAALEAVPVKVSGEMNNQLDQLFTKEE 299

Query: 64  IEWAIKNMNPSKGSGPDGAHAMFFQKYWNEIKADFVPICMEILNNGKDMRPINNTFITLI 123
           I  A+  M P+K  G DG  A FFQK+W+ +    V  C+ ILN G ++  +N+TFI L+
Sbjct: 300 IAEALAQMCPTKAPGLDGLPAAFFQKHWSSVNEGVVSTCLHILNEGGNLTLLNHTFIALV 359

Query: 124 PKSKKPKRMEEFIPISLCNVIYKVVAKVIANRLKKVLDTIISQTQSAFVPGRLITDNVVV 183
           PK  KP+++ EF PI+LCNVIY++VAK IANRLK VL+ IIS  QSAFVP RLITDN+++
Sbjct: 360 PKVSKPRKVTEFRPINLCNVIYRIVAKTIANRLKIVLNDIISSNQSAFVPNRLITDNIII 419

Query: 184 GFECIHAINNRRTGKSGLAALKLDMSKAYDRVE 217
           G+EC++ I   R  ++GL A+KLD+SKAYDRVE
Sbjct: 420 GYECLNKIRQSRGSRNGLIAMKLDISKAYDRVE 452

BLAST of Lcy09g014980 vs. TAIR 10
Match: AT1G43760.1 (DNAse I-like superfamily protein )

HSP 1 Score: 62.0 bits (149), Expect = 6.8e-10
Identity = 38/141 (26.95%), Postives = 65/141 (46.10%), Query Frame = 0

Query: 10  NVKEMGEVASKYFKNTFSSSNP--SKEAIDEIVGCLPNKVSKDQVRELERPFTSEEIEWA 69
           NV ++ E+   Y+ +   S +   + +++  I    P + +      L    + +EI  A
Sbjct: 480 NVTQVKEMIVAYYTHLLGSDSDILTPDSVQRIKDIHPFRCNDTLASRLSALPSDKEITAA 539

Query: 70  IKNMNPSKGSGPDGAHAMFFQKYWNEIKADFVPICMEILNNGKDMRPINNTFITLIPKSK 129
           +  M  +K  GPD   A FF + W  +K   +    E    G  ++  N T ITLIPK  
Sbjct: 540 VFAMPRNKAPGPDSFTAEFFWESWFVVKDSTIAAVKEFFRTGHLLKRFNATAITLIPKVT 599

Query: 130 KPKRMEEFIPISLCNVIYKVV 149
              ++  F P+S C V+YK++
Sbjct: 600 GVDQLSMFRPVSCCTVVYKII 620

BLAST of Lcy09g014980 vs. TAIR 10
Match: AT4G20520.1 (RNA binding;RNA-directed DNA polymerases )

HSP 1 Score: 58.5 bits (140), Expect = 7.5e-09
Identity = 27/64 (42.19%), Postives = 42/64 (65.62%), Query Frame = 0

Query: 152 IANRLKKVLDTIISQTQSAFVPGRLITDNVVVGFECIHAINNRRTGKSGLAALKLDMSKA 211
           +  RLK ++  +I   Q++F+PGR+ TDN+V   E +H++  R+ G  G   LKLD+ KA
Sbjct: 1   MVERLKPLMTNLIGPAQASFIPGRVSTDNIVFVQEAVHSM-RRKKGVKGWMLLKLDLEKA 60

Query: 212 YDRV 216
           YDR+
Sbjct: 61  YDRI 63

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
P143815.6e-2535.68Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV... [more]
P085485.8e-2230.77LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1[more]
P113691.1e-2030.28LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE... [more]
O003701.5e-1728.31LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A2N9IBV71.0e-5350.70Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... [more]
A0A2N9HKS51.0e-5350.70Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... [more]
A0A2N9GPZ72.9e-5350.70Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... [more]
A0A2N9IPS82.9e-5350.70Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... [more]
A0A2N9GIC46.5e-5349.76Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... [more]
Match NameE-valueIdentityDescription
XP_023881891.11.4e-5450.00uncharacterized protein LOC111994244 [Quercus suber][more]
XP_030923330.15.5e-5450.23uncharacterized protein LOC115950239 [Quercus lobata][more]
XP_015388020.11.0e-5246.48uncharacterized protein LOC107177951 [Citrus sinensis][more]
XP_023908235.13.0e-5248.37uncharacterized protein LOC112019924 [Quercus suber][more]
XP_024044510.18.8e-5248.36uncharacterized protein LOC112100177 [Citrus clementina][more]
Match NameE-valueIdentityDescription
AT1G43760.16.8e-1026.95DNAse I-like superfamily protein [more]
AT4G20520.17.5e-0942.19RNA binding;RNA-directed DNA polymerases [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 212..216
NoneNo IPR availablePANTHERPTHR19446:SF440SUBFAMILY NOT NAMEDcoord: 4..216
NoneNo IPR availablePANTHERPTHR19446REVERSE TRANSCRIPTASEScoord: 4..216
NoneNo IPR availableCDDcd01650RT_nLTR_likecoord: 118..216
e-value: 5.37053E-32
score: 113.925
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 127..216
e-value: 8.6E-15
score: 54.9
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 12..215

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy09g014980.1Lcy09g014980.1mRNA