Lcy09g014890 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy09g014890
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	RING-type domain-containing protein
Location	Chr09: 19419464 .. 19424204 (-)
RNA-Seq Expression	Lcy09g014890
Synteny	Lcy09g014890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTAGTTATTTCTCCTTATCCCTTACACAAAAAAATATAGTCTTCATTATTTTCTCTTTCTTATCCGTCTTTTACCTGCTATTATTCAGGTATGATACTTTCACACCAGAGACTGTAAAGAAAATGACCAAATCCAATCTCGTTGATGAGGTAAAGAAAACATTTCCTAATTTGAATGTTTACTTCTTGTTGCCACATATTTACTGATAGAATTGTGATAATCTTGATTAATAGGGGCATATTAGTTTTTCAACTAGTAAGTTTTGTAGAGGGGGTCATAAATGGAGTGAGTTGGAACCAGAGGTGAACAAATATTTTGGTAAGGATTTGTGATCAGAATACGTTAATAAATTGGATGTAAGAACCCTTTTGGTTATTTAAACCCCTAGATCAGTAATCCTAAAACTCCCCAATCAACCTAATTTCAACTTGAGGAAAGGTTAAGTGATAGATATTACCTTTGGACAAGAGATAAAAAAATTTATTCCCTATTTAAGATTTGAAACACTCCACTCCACAAATAATATGGTTAAAGACTATTTGAATGTTCCGAAGCATGAACTCTGAGAACAAGAATGCAAAAGATGACTAGCACTTGCCATATTCTTTGTTTCCTATTAAAGAAAAACACAAATCTGATTTATAATATAACCTACAAGGCTTTATAGGCATCAGCTTCAATATATAACCTAAAACCTACCGATAAAGCTGGTTGAAGAGTGTAGCCTCCAAAGACAATTATTCTGATGCTTAACTTCTAAGGTGATTATAGTTTTGGAATAACTTTCCAAATGACATTATTTTCTAAACTTTTTTTTTTAAAATTAAAATAGCAATATTTAGCAAAAGTCTTTGTTTTTGGATTTTATCCAAAAGGTCTCCTACCAATAGAGATGTTCTTGCATACCCAATTCTCAAAATCTTCCTAACTTCTATCTATATTTTCATCTCCAATAATTCTCCCCTCAAACAAAAGGCTATTGAGTTTCCCTTCAAATAGTCATTCATCTATCCACCTTCTATCAATCAAGAACAAATGCTTTGTGGGGTATTTGGCTGGAGTGAAATAATAGGATTTTTAGAGAGAAAGAGAGATTAGGTGAGGAAGTTTGGGAGGCTGTTAGGTTTAATACTTCCTTGTGGGTGTCGGTCATGAGACCCTTTTGTAATTATGATCTTGGCATGGTGCTTTTGGACTAGAGTCCCTTTTTGTAATATTGTCGGACTCCGTCTTCTTTAGGGCTTGTTTTTTGTATGCCCTTGTATTCTTTCATTAGTTCAATGAAAGTAAAATCAATCAAGAGCTTGTTCTTATTCAGATCAACTTCTCTTCTCTAGTCTATATCACTTATTAGCAGTGTTTTCAAGGCGACCCCAGGCGCTCGCCTATGGCGAGAGGCGAGGTGATCTGAGGTTGTTGCGCCTTGAAGGAAGCAAAAGCGAGCTCCTTCAACCAGGCGGTCGCCTGATGGCGCCTTTGGTCGCCTTTATGCGCCTTTGCCATGGTGAAGGCGAGCGCCTGATAATTATTTAGAATTAGTCAGCTCTTTTTTTTTTTTTTGGGATGTGTTCAAGAATCAAAGATGATTGAAGAATTAAAACGGAAGATGAGGAAGAAGAATCAAAGTTAAAAGAAAAAAAAAAGAAGGGAAAATCGAAGAACCTGTCTTGTTAGCTTCAACCGCTACATATGTCTTCTTCTTTTTTAACATTTTCATGCAGCAACACTAAAAGAAGAATAGTGTGTATTGCAAGCAAGTCAGTAGCACTTACATATGCATGCTTGCTAGTAAAATTGCCATCTGGTAGTAAAATTGCCAGATGACAGTATTACTAATTTTACTTCCTGTTAGTGCTATATTTAAAGTAGTTTTTGTTTATTTCAGTTAGTGTGCTTTATTTATTAAATTTCTGTTCGGGAATGTGATTGTTCAATCTTTTATTTAATTACTATTGTTTTACCATATATTTAAAGGCTTATATCTTTATTTCTTCAATTATTTAAGTTACTCAGAAAATGGTTTTAGCTATACTTTATACCTATTATATGTTTATTTATTATTTTATTAAATGCGCCTCGTTTCACTCAGGCGACGTTTTTTTGTCGCCTCTCGCCTTGAGGTGATTATAAAACTTGTCGCCTTGAAGTGCGCCTTGCGCTTTGAAAACACTGCTTATTAGAGCTCTAACTATGGAACATATTTTGGATAACCAACACCAACCACATTGTTGCACTCTTAACAATTATCTCATGAAATAAAAATTTATTAGATCTCTTCTCAACAATTGTTTTCCTAGAGCACATATTCTATTTGATGGAGCTCTGTTATGGGCCATATTTGCTAAGATAACCAAGACTCACTATTTTAGCCTCTAGGTTCTATCCACAATTTTACAGGACTACATCTCTAAGGCTAACCACTTTTTTGTTCGACACTCAAGACTTCTATATACATGGCTAGGTCTAGGGCTTGACTATGATATCACTCGTTAGGGCATTGAATCTCCCCATATCTTGGCAATAATATGTTATTGTCTACTTTGGGACTGAGCCTTTTACTTTTTGACTCGATGCAAAAGGTAGAATGAAGATGTAGATTTGACTTGTATATCGAGAATGTTCCCCACTACTAATCAATATTATTGTTTTCAGTCTACTGAGAAAAGATCACACTTGGTTTGTGATGCCAGCCTATTTACGACAAAGACGCAATTTTGTTTTTGAAGGTTAGAAATATTACAGTTTGAAGGCAAACCAAGTCACCTGGTAGCAAGGTGCACTCCTTGCAAATTGAAGGATGGTAGATTTGTGGTAGGGTTGCTAGACAGCATCTAAGGCTCTAGATTGGAATGGATAGCTTTAAGATCCTCAACTTAAACTTATTAGAAGATATGGCAGCAAGAGAGAGGTACATATAGGATTTTGTGATGTTGATAATACAGTAGTTTGGATGGTAAGATGCATTTGTTTAGAAGTGATGAGTGGAGGGAAAAAAAATCATTTCGGGGCTGTGTTGCTGTTTTAAGCAAGAAAAGTTACTTGGAACTTGGAAGAGTCGTTTACTTGACCTGACACCTTGGGGTAACATGTGTACCTAGCTAAGTAACGCTATAGAACTCAACTATTATAGATAATCAAAGGTGTTATGTCCTCTCCAGTCTTACTAGGCTTAAAGCAAAAGCCAAATGATACCTCTCATCCACATAAGCTACATTTATATACATGTTTTCTCACATTCTACCAATGCTTTTATCATGGGCCCATCCTTAAATAGATCAGCTCACAATCTCACACATCTGTTTACCTACCCCTTTAACCCTCTTCCCACCATACAAACTAAAAAATGGAGGTCTATTAATTAGGATTTAGGTTTATTTGATTTGCGAGTTGAGTAATGACTGCTTGAAGCTTTTGAGAGGGGGCTCTGTGGTTCAGTGCAGACTGGCTGTCTGCATTTCTCATACTTCCAAAGCATCTTTTTTATTTTGTATTTGATTTTTCTTTTCTGCATTTTTTTCTTTCAAGATATAGGGTTCCTTGCATATTTCTTCCAAGATTTAGTGTTTTTAGGGGCAATACTAATCGTTAGAGAGTAAGTTTGTGAGTAATGGAGATTATAAGTGCAGTGAATCGGGGAAGTTAGAGGTAGGCAATTATTTGTGTGAAGATTTTTCAGAAGAGCGTCCTTTCCAAAGTCTATCAACCTTTCTGTTTTTCTTCCAAGAATTACATACTCATAATTTTCAATTTAAATTCTGGTTCCTATCATTTACTTGGTCTTGGTCAAATGAATTAACTGGAAATTAATCTCTCCTTGTCAAGTGTTTTTCCTATATCAGACTTCTTTATTTTCTTTTCTCATGCAGATATGGAGATTACAAGCTGCATTGAATCAACAGACAGAAGTAACAAAATTGAGCCGGCAGGAGCACGAAAAGCTTCTAAATGTACTTTTTCTGACTTAACAATTACTCTGCTTATTTAGTACTTTGCTACGTTTGATCTACGAGAGAAAGAGAAGCTGTTATTTCATGGATGGAAACCTATAATGTGTTTTGTGAACAGAGCACTATATTTGAGAACCATTTTTTTTTTTTTTTAACTTTCTTTAAATTAAAAGTTTGAAATAAAAAACCAATGTCTTCAGATACAAAATCTGCTAATAATCTCCAGAATGTTTCATATAAAAAGCAGCCTCAAAACCCTTTTTTGGGTCAGAAACCAAAAACGAGAACAATTGAAAATTGAAATTTACTATCCAATGCCGGTTGATTTGATATCTTTTTTGGCTCTAACAGCACAAGGGCAATCTTTAAACCTATACATTTGATTGTTTTCAGTTTCAAATGTAGGTTTAGGTAGTTACTTCGTGTGAAATTAGTCAGGGTGTGCATAAGTTGGTTCATTTACAGTTGTCGAAAGAGAGAGTTCACCTTTTCTTTTCCCCTGATGAATTTATTAGATTGTAATTTCCAAATCTTTCAGGAGAAGATTCTTTGTAGAGTATGCTTTGATGAACCCATTGATATGGTTCTTCTTCCCTGTAGGCATCACATTCTTTGCAGGTAATTTTCACCTTCCCCTTTGTTGATCTTTTGCTGCTTTAACTTGAGACTTTTCTGTCAATTTGACTGTGTTTATGTCAAATGGGATTTCAGCTCTTGTTGTGAGAAATGTAATCGGTGCCCGATCTGTCGGGAATCTATCGAAGAACGACTGCCTGTAAATGATGTTTAG

mRNA sequence

ATGTCTAGTTATTTCTCCTTATCCCTTACACAAAAAAATATAGTCTTCATTATTTTCTCTTTCTTATCCGTCTTTTACCTGCTATTATTCAGGTATGATACTTTCACACCAGAGACTGTAAAGAAAATGACCAAATCCAATCTCGTTGATGAGATATGGAGATTACAAGCTGCATTGAATCAACAGACAGAAGTAACAAAATTGAGCCGGCAGGAGCACGAAAAGCTTCTAAATGAGAAGATTCTTTGTAGAGTATGCTTTGATGAACCCATTGATATGGTTCTTCTTCCCTGTAGGCATCACATTCTTTGCAGCTCTTGTTGTGAGAAATGTAATCGGTGCCCGATCTGTCGGGAATCTATCGAAGAACGACTGCCTGTAAATGATGTTTAG

Coding sequence (CDS)

ATGTCTAGTTATTTCTCCTTATCCCTTACACAAAAAAATATAGTCTTCATTATTTTCTCTTTCTTATCCGTCTTTTACCTGCTATTATTCAGGTATGATACTTTCACACCAGAGACTGTAAAGAAAATGACCAAATCCAATCTCGTTGATGAGATATGGAGATTACAAGCTGCATTGAATCAACAGACAGAAGTAACAAAATTGAGCCGGCAGGAGCACGAAAAGCTTCTAAATGAGAAGATTCTTTGTAGAGTATGCTTTGATGAACCCATTGATATGGTTCTTCTTCCCTGTAGGCATCACATTCTTTGCAGCTCTTGTTGTGAGAAATGTAATCGGTGCCCGATCTGTCGGGAATCTATCGAAGAACGACTGCCTGTAAATGATGTTTAG

Protein sequence

MSSYFSLSLTQKNIVFIIFSFLSVFYLLLFRYDTFTPETVKKMTKSNLVDEIWRLQAALNQQTEVTKLSRQEHEKLLNEKILCRVCFDEPIDMVLLPCRHHILCSSCCEKCNRCPICRESIEERLPVNDV

Homology

[Close]

BLAST of Lcy09g014890 vs. ExPASy Swiss-Prot
Match: Q7M3S9 (RING finger protein B OS=Dictyostelium discoideum OX=44689 GN=rngB PE=2 SV=2)

HSP 1 Score: 62.8 bits (151), Expect = 3.4e-09
Identity = 29/71 (40.85%), Postives = 42/71 (59.15%), Query Frame = 0


Query: 58  ALNQQTEVTKLSRQEHEK-LLNEKILCRVCFDEPIDMVLLPCRHHILCSSCCEKCNRCPI 117
           ++  Q  + +L   E EK  L ++  C +C   P ++VLLPCRH  LCS CC K  +CPI
Sbjct: 871 SIKDQRYLNRLVSLEKEKDQLKDQNSCVICASNPPNIVLLPCRHSSLCSDCCSKLTKCPI 930

Query: 118 CRESIEERLPV 128
           CR  IE ++ +
Sbjct: 931 CRSHIENKISI 941

[Close]

BLAST of Lcy09g014890 vs. ExPASy Swiss-Prot
Match: Q9SJU0 (Kinesin-like protein KIN-7M, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=KIN7M PE=2 SV=2)

HSP 1 Score: 62.4 bits (150), Expect = 4.4e-09
Identity = 24/44 (54.55%), Postives = 30/44 (68.18%), Query Frame = 0


Query: 82   LCRVCFDEPIDMVLLPCRHHILCSSCCEKCNRCPICRESIEERL 126
            +C+VCF+ P   +LLPCRH  LC SC   C+ CPICR  I +RL
Sbjct: 1010 ICKVCFESPTATILLPCRHFCLCKSCSLACSECPICRTKISDRL 1053

[Close]

BLAST of Lcy09g014890 vs. ExPASy Swiss-Prot
Match: Q8W5R5 (Kinesin-like protein KIN-7D, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=KIN7D PE=2 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 9.8e-09
Identity = 29/72 (40.28%), Postives = 40/72 (55.56%), Query Frame = 0


Query: 54   RLQAALNQQTEVTKLSRQEHEKLLNEKILCRVCFDEPIDMVLLPCRHHILCSSCCEKCNR 113
            RL+A + +  E    S+   +       +C+VCF+ P   +LLPCRH  LC SC   C+ 
Sbjct: 982  RLKARMQEMKEKEMKSQANGDA---NSHICKVCFESPTAAILLPCRHFCLCKSCSLACSE 1041

Query: 114  CPICRESIEERL 126
            CPICR  I +RL
Sbjct: 1042 CPICRTKISDRL 1050

[Close]

BLAST of Lcy09g014890 vs. ExPASy Swiss-Prot
Match: Q24307 (Death-associated inhibitor of apoptosis 2 OS=Drosophila melanogaster OX=7227 GN=Diap2 PE=1 SV=3)

HSP 1 Score: 56.6 bits (135), Expect = 2.4e-07
Identity = 28/77 (36.36%), Postives = 40/77 (51.95%), Query Frame = 0


Query: 46  SNLVDEIWRLQAALNQQTEVTKLSRQEHEKLLNEKILCRVCFDEPIDMVLLPCRHHILCS 105
           S + DEI ++  A    T    LS +E  + L +  LC+VC DE + +V LPC H   C+
Sbjct: 418 SKITDEIQKMSVA----TPNGNLSLEEENRQLKDARLCKVCLDEEVGVVFLPCGHLATCN 477

Query: 106 SCCEKCNRCPICRESIE 123
            C      CP+CR  I+
Sbjct: 478 QCAPSVANCPMCRADIK 490

[Close]

BLAST of Lcy09g014890 vs. ExPASy Swiss-Prot
Match: Q8WZ73 (E3 ubiquitin-protein ligase rififylin OS=Homo sapiens OX=9606 GN=RFFL PE=1 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 3.1e-07
Identity = 21/43 (48.84%), Postives = 30/43 (69.77%), Query Frame = 0


Query: 79  EKILCRVCFDEPIDMVLLPCRHHILCSSCCEKCNRCPICRESI 122
           E+ LC++C D PID VLL C H + C+ C ++ N CPICR+ +
Sbjct: 312 EENLCKICMDSPIDCVLLECGHMVTCTKCGKRMNECPICRQYV 354

[Close]

BLAST of Lcy09g014890 vs. ExPASy TrEMBL
Match: A0A6J1IDN8 (uncharacterized protein LOC111472200 OS=Cucurbita maxima OX=3661 GN=LOC111472200 PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 5.0e-48
Identity = 96/99 (96.97%), Postives = 96/99 (96.97%), Query Frame = 0


Query: 32  YDTFTPETVKKMTKSNLVDEIWRLQAALNQQTEVTKLSRQEHEKLLNEKILCRVCFDEPI 91
           YDTFTPETVKK TKSNLVDEIWRLQAALNQQTEVTKLSRQEHEKLL EKILCRVCFDEPI
Sbjct: 369 YDTFTPETVKKRTKSNLVDEIWRLQAALNQQTEVTKLSRQEHEKLLYEKILCRVCFDEPI 428

Query: 92  DMVLLPCRHHILCSSCCEKCNRCPICRESIEERLPVNDV 131
           DMVLLPCRHHILCSSC EKCNRCPICRESIEERLPVNDV
Sbjct: 429 DMVLLPCRHHILCSSCSEKCNRCPICRESIEERLPVNDV 467

[Close]

BLAST of Lcy09g014890 vs. ExPASy TrEMBL
Match: A0A6J1EQP2 (uncharacterized protein LOC111436604 OS=Cucurbita moschata OX=3662 GN=LOC111436604 PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 5.0e-48
Identity = 96/99 (96.97%), Postives = 96/99 (96.97%), Query Frame = 0


Query: 32  YDTFTPETVKKMTKSNLVDEIWRLQAALNQQTEVTKLSRQEHEKLLNEKILCRVCFDEPI 91
           YDTFTPETVKK TKSNLVDEIWRLQAALNQQTEVTKLSRQEHEKLL EKILCRVCFDEPI
Sbjct: 369 YDTFTPETVKKRTKSNLVDEIWRLQAALNQQTEVTKLSRQEHEKLLYEKILCRVCFDEPI 428

Query: 92  DMVLLPCRHHILCSSCCEKCNRCPICRESIEERLPVNDV 131
           DMVLLPCRHHILCSSC EKCNRCPICRESIEERLPVNDV
Sbjct: 429 DMVLLPCRHHILCSSCSEKCNRCPICRESIEERLPVNDV 467

[Close]

BLAST of Lcy09g014890 vs. ExPASy TrEMBL
Match: A0A6J1DSE2 (uncharacterized protein LOC111023869 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111023869 PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 1.4e-47
Identity = 92/99 (92.93%), Postives = 96/99 (96.97%), Query Frame = 0


Query: 32  YDTFTPETVKKMTKSNLVDEIWRLQAALNQQTEVTKLSRQEHEKLLNEKILCRVCFDEPI 91
           YDTFTPE+VKKMTKS LVDEIWRLQAALNQQTEVTK SRQEHEK+LNEKILCR+CFDE I
Sbjct: 287 YDTFTPESVKKMTKSKLVDEIWRLQAALNQQTEVTKFSRQEHEKILNEKILCRICFDEDI 346

Query: 92  DMVLLPCRHHILCSSCCEKCNRCPICRESIEERLPVNDV 131
           DMVLLPCRHHILCS+CCEKCNRCPICRESIEERLPVNDV
Sbjct: 347 DMVLLPCRHHILCSTCCEKCNRCPICRESIEERLPVNDV 385

[Close]

BLAST of Lcy09g014890 vs. ExPASy TrEMBL
Match: A0A6J1DTJ9 (uncharacterized protein LOC111023869 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111023869 PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 1.4e-47
Identity = 92/99 (92.93%), Postives = 96/99 (96.97%), Query Frame = 0


Query: 32  YDTFTPETVKKMTKSNLVDEIWRLQAALNQQTEVTKLSRQEHEKLLNEKILCRVCFDEPI 91
           YDTFTPE+VKKMTKS LVDEIWRLQAALNQQTEVTK SRQEHEK+LNEKILCR+CFDE I
Sbjct: 369 YDTFTPESVKKMTKSKLVDEIWRLQAALNQQTEVTKFSRQEHEKILNEKILCRICFDEDI 428

Query: 92  DMVLLPCRHHILCSSCCEKCNRCPICRESIEERLPVNDV 131
           DMVLLPCRHHILCS+CCEKCNRCPICRESIEERLPVNDV
Sbjct: 429 DMVLLPCRHHILCSTCCEKCNRCPICRESIEERLPVNDV 467

[Close]

BLAST of Lcy09g014890 vs. ExPASy TrEMBL
Match: A0A6J1DWU2 (uncharacterized protein LOC111023869 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111023869 PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 1.4e-47
Identity = 92/99 (92.93%), Postives = 96/99 (96.97%), Query Frame = 0


Query: 32  YDTFTPETVKKMTKSNLVDEIWRLQAALNQQTEVTKLSRQEHEKLLNEKILCRVCFDEPI 91
           YDTFTPE+VKKMTKS LVDEIWRLQAALNQQTEVTK SRQEHEK+LNEKILCR+CFDE I
Sbjct: 369 YDTFTPESVKKMTKSKLVDEIWRLQAALNQQTEVTKFSRQEHEKILNEKILCRICFDEDI 428

Query: 92  DMVLLPCRHHILCSSCCEKCNRCPICRESIEERLPVNDV 131
           DMVLLPCRHHILCS+CCEKCNRCPICRESIEERLPVNDV
Sbjct: 429 DMVLLPCRHHILCSTCCEKCNRCPICRESIEERLPVNDV 467

[Close]

BLAST of Lcy09g014890 vs. NCBI nr
Match: XP_038894365.1 (uncharacterized protein LOC120082978 isoform X2 [Benincasa hispida])

HSP 1 Score: 208.0 bits (528), Expect = 4.9e-50
Identity = 98/99 (98.99%), Postives = 99/99 (100.00%), Query Frame = 0


Query: 32  YDTFTPETVKKMTKSNLVDEIWRLQAALNQQTEVTKLSRQEHEKLLNEKILCRVCFDEPI 91
           YDTFTPE+VKKMTKSNLVDEIWRLQAALNQQTEVTKLSRQEHEKLLNEKILCRVCFDEPI
Sbjct: 358 YDTFTPESVKKMTKSNLVDEIWRLQAALNQQTEVTKLSRQEHEKLLNEKILCRVCFDEPI 417

Query: 92  DMVLLPCRHHILCSSCCEKCNRCPICRESIEERLPVNDV 131
           DMVLLPCRHHILCSSCCEKCNRCPICRESIEERLPVNDV
Sbjct: 418 DMVLLPCRHHILCSSCCEKCNRCPICRESIEERLPVNDV 456

[Close]

BLAST of Lcy09g014890 vs. NCBI nr
Match: XP_038894364.1 (uncharacterized protein LOC120082978 isoform X1 [Benincasa hispida])

HSP 1 Score: 208.0 bits (528), Expect = 4.9e-50
Identity = 98/99 (98.99%), Postives = 99/99 (100.00%), Query Frame = 0


Query: 32  YDTFTPETVKKMTKSNLVDEIWRLQAALNQQTEVTKLSRQEHEKLLNEKILCRVCFDEPI 91
           YDTFTPE+VKKMTKSNLVDEIWRLQAALNQQTEVTKLSRQEHEKLLNEKILCRVCFDEPI
Sbjct: 369 YDTFTPESVKKMTKSNLVDEIWRLQAALNQQTEVTKLSRQEHEKLLNEKILCRVCFDEPI 428

Query: 92  DMVLLPCRHHILCSSCCEKCNRCPICRESIEERLPVNDV 131
           DMVLLPCRHHILCSSCCEKCNRCPICRESIEERLPVNDV
Sbjct: 429 DMVLLPCRHHILCSSCCEKCNRCPICRESIEERLPVNDV 467

[Close]

BLAST of Lcy09g014890 vs. NCBI nr
Match: XP_023515362.1 (uncharacterized protein LOC111779463 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023515363.1 uncharacterized protein LOC111779463 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 200.3 bits (508), Expect = 1.0e-47
Identity = 96/99 (96.97%), Postives = 96/99 (96.97%), Query Frame = 0


Query: 32  YDTFTPETVKKMTKSNLVDEIWRLQAALNQQTEVTKLSRQEHEKLLNEKILCRVCFDEPI 91
           YDTFTPETVKK TKSNLVDEIWRLQAALNQQTEVTKLSRQEHEKLL EKILCRVCFDEPI
Sbjct: 369 YDTFTPETVKKRTKSNLVDEIWRLQAALNQQTEVTKLSRQEHEKLLYEKILCRVCFDEPI 428

Query: 92  DMVLLPCRHHILCSSCCEKCNRCPICRESIEERLPVNDV 131
           DMVLLPCRHHILCSSC EKCNRCPICRESIEERLPVNDV
Sbjct: 429 DMVLLPCRHHILCSSCSEKCNRCPICRESIEERLPVNDV 467

[Close]

BLAST of Lcy09g014890 vs. NCBI nr
Match: XP_022930119.1 (uncharacterized protein LOC111436604 [Cucurbita moschata])

HSP 1 Score: 200.3 bits (508), Expect = 1.0e-47
Identity = 96/99 (96.97%), Postives = 96/99 (96.97%), Query Frame = 0


Query: 32  YDTFTPETVKKMTKSNLVDEIWRLQAALNQQTEVTKLSRQEHEKLLNEKILCRVCFDEPI 91
           YDTFTPETVKK TKSNLVDEIWRLQAALNQQTEVTKLSRQEHEKLL EKILCRVCFDEPI
Sbjct: 369 YDTFTPETVKKRTKSNLVDEIWRLQAALNQQTEVTKLSRQEHEKLLYEKILCRVCFDEPI 428

Query: 92  DMVLLPCRHHILCSSCCEKCNRCPICRESIEERLPVNDV 131
           DMVLLPCRHHILCSSC EKCNRCPICRESIEERLPVNDV
Sbjct: 429 DMVLLPCRHHILCSSCSEKCNRCPICRESIEERLPVNDV 467

[Close]

BLAST of Lcy09g014890 vs. NCBI nr
Match: KAG6601754.1 (Kinesin-like protein KIN-7D, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032478.1 Kinesin-like protein KIN-7D, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 200.3 bits (508), Expect = 1.0e-47
Identity = 96/99 (96.97%), Postives = 96/99 (96.97%), Query Frame = 0


Query: 32  YDTFTPETVKKMTKSNLVDEIWRLQAALNQQTEVTKLSRQEHEKLLNEKILCRVCFDEPI 91
           YDTFTPETVKK TKSNLVDEIWRLQAALNQQTEVTKLSRQEHEKLL EKILCRVCFDEPI
Sbjct: 369 YDTFTPETVKKRTKSNLVDEIWRLQAALNQQTEVTKLSRQEHEKLLYEKILCRVCFDEPI 428

Query: 92  DMVLLPCRHHILCSSCCEKCNRCPICRESIEERLPVNDV 131
           DMVLLPCRHHILCSSC EKCNRCPICRESIEERLPVNDV
Sbjct: 429 DMVLLPCRHHILCSSCSEKCNRCPICRESIEERLPVNDV 467

[Close]

BLAST of Lcy09g014890 vs. TAIR 10
Match: AT1G68820.1 (Transmembrane Fragile-X-F-associated protein )

HSP 1 Score: 162.5 bits (410), Expect = 2.2e-40
Identity = 71/99 (71.72%), Postives = 90/99 (90.91%), Query Frame = 0


Query: 32  YDTFTPETVKKMTKSNLVDEIWRLQAALNQQTEVTKLSRQEHEKLLNEKILCRVCFDEPI 91
           Y+TF+PE VKKM KS+LV+EIWRLQAAL++QT++T  S+QE+E+L NEKILCRVCF++PI
Sbjct: 370 YNTFSPEVVKKMPKSDLVEEIWRLQAALSEQTDITSYSQQEYERLQNEKILCRVCFEDPI 429

Query: 92  DMVLLPCRHHILCSSCCEKCNRCPICRESIEERLPVNDV 131
           ++VLLPCRHH+LCS+CCEKC +CPICR  IEER+PV DV
Sbjct: 430 NVVLLPCRHHVLCSTCCEKCKKCPICRVLIEERMPVYDV 468

[Close]

BLAST of Lcy09g014890 vs. TAIR 10
Match: AT1G73950.1 (Transmembrane Fragile-X-F-associated protein )

HSP 1 Score: 140.6 bits (353), Expect = 9.0e-34
Identity = 64/102 (62.75%), Postives = 80/102 (78.43%), Query Frame = 0


Query: 32  YDTF---TPETVKKMTKSNLVDEIWRLQAALNQQTEVTKLSRQEHEKLLNEKILCRVCFD 91
           Y+TF    PE VKKM K  L +E+WRLQAAL +QTE+TK S+QE+E+L NEK+LCRVCF+
Sbjct: 365 YNTFCGHPPEIVKKMPKKELAEEVWRLQAALGEQTEITKFSQQEYERLQNEKVLCRVCFE 424

Query: 92  EPIDMVLLPCRHHILCSSCCEKCNRCPICRESIEERLPVNDV 131
             I +VLLPCRH +LC +C +KC +CP CR +IEERLPV DV
Sbjct: 425 REISVVLLPCRHRVLCRNCSDKCKKCPFCRITIEERLPVYDV 466

[Close]

BLAST of Lcy09g014890 vs. TAIR 10
Match: AT1G18470.1 (Transmembrane Fragile-X-F-associated protein )

HSP 1 Score: 138.3 bits (347), Expect = 4.5e-33
Identity = 63/102 (61.76%), Postives = 81/102 (79.41%), Query Frame = 0


Query: 32  YDTFT---PETVKKMTKSNLVDEIWRLQAALNQQTEVTKLSRQEHEKLLNEKILCRVCFD 91
           Y+TF+   PE VKKM K +L +E+WRLQAAL +QTE+TK S+QE+E+L NEK+LCRVCF+
Sbjct: 366 YNTFSGHPPEIVKKMPKEDLAEEVWRLQAALGEQTEITKFSQQEYERLQNEKVLCRVCFE 425

Query: 92  EPIDMVLLPCRHHILCSSCCEKCNRCPICRESIEERLPVNDV 131
           + I +VLLPCRH +LC +C +KC  CPICR  IE+RL V DV
Sbjct: 426 KDISLVLLPCRHRVLCRTCADKCTTCPICRIDIEKRLSVYDV 467

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BLAST of Lcy09g014890 vs. TAIR 10
Match: AT2G21380.1 (Kinesin motor family protein )

HSP 1 Score: 62.4 bits (150), Expect = 3.1e-10
Identity = 24/44 (54.55%), Postives = 30/44 (68.18%), Query Frame = 0


Query: 82   LCRVCFDEPIDMVLLPCRHHILCSSCCEKCNRCPICRESIEERL 126
            +C+VCF+ P   +LLPCRH  LC SC   C+ CPICR  I +RL
Sbjct: 1010 ICKVCFESPTATILLPCRHFCLCKSCSLACSECPICRTKISDRL 1053

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BLAST of Lcy09g014890 vs. TAIR 10
Match: AT4G39050.1 (Kinesin motor family protein )

HSP 1 Score: 61.2 bits (147), Expect = 6.9e-10
Identity = 29/72 (40.28%), Postives = 40/72 (55.56%), Query Frame = 0


Query: 54   RLQAALNQQTEVTKLSRQEHEKLLNEKILCRVCFDEPIDMVLLPCRHHILCSSCCEKCNR 113
            RL+A + +  E    S+   +       +C+VCF+ P   +LLPCRH  LC SC   C+ 
Sbjct: 982  RLKARMQEMKEKEMKSQANGDA---NSHICKVCFESPTAAILLPCRHFCLCKSCSLACSE 1041

Query: 114  CPICRESIEERL 126
            CPICR  I +RL
Sbjct: 1042 CPICRTKISDRL 1050

The following BLAST results are available for this feature:

BLAST of Lcy09g014890 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7M3S9	3.4e-09	40.85	RING finger protein B OS=Dictyostelium discoideum OX=44689 GN=rngB PE=2 SV=2	[more]
Q9SJU0	4.4e-09	54.55	Kinesin-like protein KIN-7M, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=KI...	[more]
Q8W5R5	9.8e-09	40.28	Kinesin-like protein KIN-7D, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=KI...	[more]
Q24307	2.4e-07	36.36	Death-associated inhibitor of apoptosis 2 OS=Drosophila melanogaster OX=7227 GN=...	[more]
Q8WZ73	3.1e-07	48.84	E3 ubiquitin-protein ligase rififylin OS=Homo sapiens OX=9606 GN=RFFL PE=1 SV=1	[more]

BLAST of Lcy09g014890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IDN8	5.0e-48	96.97	uncharacterized protein LOC111472200 OS=Cucurbita maxima OX=3661 GN=LOC111472200...	[more]
A0A6J1EQP2	5.0e-48	96.97	uncharacterized protein LOC111436604 OS=Cucurbita moschata OX=3662 GN=LOC1114366...	[more]
A0A6J1DSE2	1.4e-47	92.93	uncharacterized protein LOC111023869 isoform X3 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1DTJ9	1.4e-47	92.93	uncharacterized protein LOC111023869 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1DWU2	1.4e-47	92.93	uncharacterized protein LOC111023869 isoform X1 OS=Momordica charantia OX=3673 G...	[more]

BLAST of Lcy09g014890 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038894365.1	4.9e-50	98.99	uncharacterized protein LOC120082978 isoform X2 [Benincasa hispida]	[more]
XP_038894364.1	4.9e-50	98.99	uncharacterized protein LOC120082978 isoform X1 [Benincasa hispida]	[more]
XP_023515362.1	1.0e-47	96.97	uncharacterized protein LOC111779463 isoform X1 [Cucurbita pepo subsp. pepo] >XP...	[more]
XP_022930119.1	1.0e-47	96.97	uncharacterized protein LOC111436604 [Cucurbita moschata]	[more]
KAG6601754.1	1.0e-47	96.97	Kinesin-like protein KIN-7D, mitochondrial, partial [Cucurbita argyrosperma subs...	[more]

BLAST of Lcy09g014890 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68820.1	2.2e-40	71.72	Transmembrane Fragile-X-F-associated protein	[more]
AT1G73950.1	9.0e-34	62.75	Transmembrane Fragile-X-F-associated protein	[more]
AT1G18470.1	4.5e-33	61.76	Transmembrane Fragile-X-F-associated protein	[more]
AT2G21380.1	3.1e-10	54.55	Kinesin motor family protein	[more]
AT4G39050.1	6.9e-10	40.28	Kinesin motor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF13920	zf-C3HC4_3	coord: 81..123 e-value: 8.6E-12 score: 44.7
None	No IPR available	PANTHER	PTHR46859	TRANSMEMBRANE FRAGILE-X-F-ASSOCIATED PROTEIN	coord: 30..130
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 74..124
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 57..127 e-value: 2.2E-16 score: 61.1
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 83..118 score: 11.102496

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy09g014890.1	Lcy09g014890.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane