Lcy09g014870 (gene) Sponge gourd (P93075) v1

Overview
NameLcy09g014870
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Descriptionvinorine synthase-like
LocationChr09: 19378886 .. 19379281 (-)
RNA-Seq ExpressionLcy09g014870
SyntenyLcy09g014870
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTCTCCCTTCTGTCGAAACACTCACCGACAGCAGCTGCTCCAGCCTGGTCAACGAGGTCAGACACCAGATCGTCAAAATCGACGCCGAGTTTCTCAGGCAGTTCTAAGAAGAGAACGCGAAATTGAAGATCATCAAAGCCACGTCAGCCCGATTCGTCAAAGGCGAGATCGTGTCCTGTGCCTTCACCAGCCTCTTCCGGCTCCCTCTTTACGACGCTGACTTCGGCTAGGGATCGCCGGCGCTGCCTTTCAGAAACCTAGTGGTTTTTATGGACGGGAAGTCCGACGACGGCACCGTCGTAGCTCTGGTTCATTTGAAGGAATCACACATGGAGAAGGTCGAAGCCGATCACGAGTTTCTGGAGTTTGCTTCTCCTACTGGTTTCGATTGA

mRNA sequence

ATGACTCTCCCTTCTGTCGAAACACTCACCGACAGCAGCTGCTCCAGCCTGGTCAACGAGGGATCGCCGGCGCTGCCTTTCAGAAACCTAGTGGTTTTTATGGACGGGAAGTCCGACGACGGCACCGTCGTAGCTCTGGTTCATTTGAAGGAATCACACATGGAGAAGGTCGAAGCCGATCACGAGTTTCTGGAGTTTGCTTCTCCTACTGGTTTCGATTGA

Coding sequence (CDS)

ATGACTCTCCCTTCTGTCGAAACACTCACCGACAGCAGCTGCTCCAGCCTGGTCAACGAGGGATCGCCGGCGCTGCCTTTCAGAAACCTAGTGGTTTTTATGGACGGGAAGTCCGACGACGGCACCGTCGTAGCTCTGGTTCATTTGAAGGAATCACACATGGAGAAGGTCGAAGCCGATCACGAGTTTCTGGAGTTTGCTTCTCCTACTGGTTTCGATTGA

Protein sequence

MTLPSVETLTDSSCSSLVNEGSPALPFRNLVVFMDGKSDDGTVVALVHLKESHMEKVEADHEFLEFASPTGFD
Homology
BLAST of Lcy09g014870 vs. ExPASy TrEMBL
Match: A0A5A7UYI2 (Vinorine synthase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G001690 PE=3 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 4.2e-12
Identity = 40/60 (66.67%), Postives = 44/60 (73.33%), Query Frame = 0

Query: 11  DSSCSSLVNEGSPALPFRNLVVFMDGKSDDGTVVALVHLKESHMEKVEADHEFLEFASPT 70
           D    S V   SPALPF+NL V MDGKS DG V  LVHLKESHME++E D EFL+FASPT
Sbjct: 75  DFGWGSPVWAASPALPFKNLFVLMDGKSSDGAVDVLVHLKESHMERLEVDREFLKFASPT 134

BLAST of Lcy09g014870 vs. ExPASy TrEMBL
Match: A0A1S3BB10 (vinorine synthase-like OS=Cucumis melo OX=3656 GN=LOC103487746 PE=3 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 4.2e-12
Identity = 40/60 (66.67%), Postives = 44/60 (73.33%), Query Frame = 0

Query: 11  DSSCSSLVNEGSPALPFRNLVVFMDGKSDDGTVVALVHLKESHMEKVEADHEFLEFASPT 70
           D    S V   SPALPF+NL V MDGKS DG V  LVHLKESHME++E D EFL+FASPT
Sbjct: 374 DFGWGSPVWAASPALPFKNLFVLMDGKSSDGAVDVLVHLKESHMERLEVDREFLKFASPT 433

BLAST of Lcy09g014870 vs. ExPASy TrEMBL
Match: A0A0A0LKB2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G350330 PE=3 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 2.1e-11
Identity = 36/50 (72.00%), Postives = 41/50 (82.00%), Query Frame = 0

Query: 21  GSPALPFRNLVVFMDGKSDDGTVVALVHLKESHMEKVEADHEFLEFASPT 71
           GSPALPF+NL V MDGK  DG V  LVHLKESHME+++ D EFL+FASPT
Sbjct: 85  GSPALPFKNLFVLMDGKFGDGAVDVLVHLKESHMERLKVDREFLKFASPT 134

BLAST of Lcy09g014870 vs. ExPASy TrEMBL
Match: A0A6J1BS06 (vinorine synthase-like OS=Momordica charantia OX=3673 GN=LOC111005025 PE=3 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 8.0e-11
Identity = 50/134 (37.31%), Postives = 57/134 (42.54%), Query Frame = 0

Query: 1   MTLPSVETLTDSSCSSLVNE---------------------------------------- 60
           +TLPS ETLTD +CS LVNE                                        
Sbjct: 301 LTLPSPETLTDDNCSGLVNEVRHQIAKIDAEFLRQFQEENAQLETIKATSARFMKGEIVS 360

Query: 61  ------------------------GSPALPFRNLVVFMDGKSDDGTVVALVHLKESHMEK 71
                                    SPALPF+NLVV MD KS DG + A+VHL E HM K
Sbjct: 361 FALTSLCRFPLYDADFGWGKPAWAASPALPFKNLVVLMDAKSGDGAIDAVVHLNEPHMAK 420

BLAST of Lcy09g014870 vs. ExPASy TrEMBL
Match: A0A6P4AI89 (vinorine synthase-like OS=Ziziphus jujuba OX=326968 GN=LOC107428484 PE=3 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 2.0e-06
Identity = 31/49 (63.27%), Postives = 35/49 (71.43%), Query Frame = 0

Query: 21  GSPALPFRNLVVFMDGKSDDGTVVALVHLKESHMEKVEADHEFLEFASP 70
           GSPAL F+NLVVFMD K  DG + A + LKE HM K+E D EFL F SP
Sbjct: 375 GSPALTFKNLVVFMDTKIGDG-IEAYISLKEEHMAKLEGDQEFLTFVSP 422

BLAST of Lcy09g014870 vs. NCBI nr
Match: XP_038886246.1 (stemmadenine O-acetyltransferase-like [Benincasa hispida])

HSP 1 Score: 80.1 bits (196), Expect = 8.7e-12
Identity = 38/51 (74.51%), Postives = 43/51 (84.31%), Query Frame = 0

Query: 22  SPALPFRNLVVFMDGKSDDGTVVALVHLKESHMEKVEADHEFLEFASPTGF 73
           SPALPF+NLVVFMD KS DG V A+VHLKESHM++ E D EFL+FASPT F
Sbjct: 423 SPALPFKNLVVFMDTKSGDGAVDAIVHLKESHMKRFEVDCEFLKFASPTAF 473

BLAST of Lcy09g014870 vs. NCBI nr
Match: KAA0061033.1 (vinorine synthase-like [Cucumis melo var. makuwa])

HSP 1 Score: 80.1 bits (196), Expect = 8.7e-12
Identity = 40/60 (66.67%), Postives = 44/60 (73.33%), Query Frame = 0

Query: 11  DSSCSSLVNEGSPALPFRNLVVFMDGKSDDGTVVALVHLKESHMEKVEADHEFLEFASPT 70
           D    S V   SPALPF+NL V MDGKS DG V  LVHLKESHME++E D EFL+FASPT
Sbjct: 75  DFGWGSPVWAASPALPFKNLFVLMDGKSSDGAVDVLVHLKESHMERLEVDREFLKFASPT 134

BLAST of Lcy09g014870 vs. NCBI nr
Match: XP_008444409.1 (PREDICTED: vinorine synthase-like [Cucumis melo])

HSP 1 Score: 80.1 bits (196), Expect = 8.7e-12
Identity = 40/60 (66.67%), Postives = 44/60 (73.33%), Query Frame = 0

Query: 11  DSSCSSLVNEGSPALPFRNLVVFMDGKSDDGTVVALVHLKESHMEKVEADHEFLEFASPT 70
           D    S V   SPALPF+NL V MDGKS DG V  LVHLKESHME++E D EFL+FASPT
Sbjct: 374 DFGWGSPVWAASPALPFKNLFVLMDGKSSDGAVDVLVHLKESHMERLEVDREFLKFASPT 433

BLAST of Lcy09g014870 vs. NCBI nr
Match: XP_004143050.2 (stemmadenine O-acetyltransferase [Cucumis sativus] >KAE8652046.1 hypothetical protein Csa_018730 [Cucumis sativus])

HSP 1 Score: 77.8 bits (190), Expect = 4.3e-11
Identity = 36/50 (72.00%), Postives = 41/50 (82.00%), Query Frame = 0

Query: 21  GSPALPFRNLVVFMDGKSDDGTVVALVHLKESHMEKVEADHEFLEFASPT 71
           GSPALPF+NL V MDGK  DG V  LVHLKESHME+++ D EFL+FASPT
Sbjct: 383 GSPALPFKNLFVLMDGKFGDGAVDVLVHLKESHMERLKVDREFLKFASPT 432

BLAST of Lcy09g014870 vs. NCBI nr
Match: XP_022132064.1 (vinorine synthase-like [Momordica charantia])

HSP 1 Score: 75.9 bits (185), Expect = 1.6e-10
Identity = 50/134 (37.31%), Postives = 57/134 (42.54%), Query Frame = 0

Query: 1   MTLPSVETLTDSSCSSLVNE---------------------------------------- 60
           +TLPS ETLTD +CS LVNE                                        
Sbjct: 301 LTLPSPETLTDDNCSGLVNEVRHQIAKIDAEFLRQFQEENAQLETIKATSARFMKGEIVS 360

Query: 61  ------------------------GSPALPFRNLVVFMDGKSDDGTVVALVHLKESHMEK 71
                                    SPALPF+NLVV MD KS DG + A+VHL E HM K
Sbjct: 361 FALTSLCRFPLYDADFGWGKPAWAASPALPFKNLVVLMDAKSGDGAIDAVVHLNEPHMAK 420

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7UYI24.2e-1266.67Vinorine synthase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold5... [more]
A0A1S3BB104.2e-1266.67vinorine synthase-like OS=Cucumis melo OX=3656 GN=LOC103487746 PE=3 SV=1[more]
A0A0A0LKB22.1e-1172.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G350330 PE=3 SV=1[more]
A0A6J1BS068.0e-1137.31vinorine synthase-like OS=Momordica charantia OX=3673 GN=LOC111005025 PE=3 SV=1[more]
A0A6P4AI892.0e-0663.27vinorine synthase-like OS=Ziziphus jujuba OX=326968 GN=LOC107428484 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
XP_038886246.18.7e-1274.51stemmadenine O-acetyltransferase-like [Benincasa hispida][more]
KAA0061033.18.7e-1266.67vinorine synthase-like [Cucumis melo var. makuwa][more]
XP_008444409.18.7e-1266.67PREDICTED: vinorine synthase-like [Cucumis melo][more]
XP_004143050.24.3e-1172.00stemmadenine O-acetyltransferase [Cucumis sativus] >KAE8652046.1 hypothetical pr... [more]
XP_022132064.11.6e-1037.31vinorine synthase-like [Momordica charantia][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023213Chloramphenicol acetyltransferase-like domain superfamilyGENE3D3.30.559.10coord: 4..71
e-value: 6.1E-7
score: 31.0

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy09g014870.1Lcy09g014870.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups