Lcy09g014820 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy09g014820
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Retrotransposon protein
Location	Chr09: 19186721 .. 19187983 (+)
RNA-Seq Expression	Lcy09g014820
Synteny	Lcy09g014820

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGGTCTAGACATAGAAGCTGAAGACTTGATCGCCATCCTTACTGTGATCTGTGCCACACAGTACCAATTCGTGGTTTCTTTGATCGGGATATTACATTGTGACAATAGAATTGATAATCAGTCTCCTCCTCACGTACGACATCAAATTAGACAACTAAACTTCTTCAGACTAATACATGAGGATGACTTAGCGTGTCGAGAGAACACTCGCATGGATAGGAGAACATTCACTGTCCTATGCTCCCTGTTACGAACGACAGGCAGATTGGAATCAACTAATTATGTCGACGTGGAGGAAATGGTTGCAATGTTTCTACATATCATTGCCCACGACATGAAGAATAGAGTCATACGACGACAGTTCGTGCGGTCGGGTGAGACCGTATCTAGGCACTTTAACGCTGTCCTGGATGCGATCCTCCGATTGCACTCGGTACTGCTAAAATCTCCTGAGCCAGTGACTAGCACAAGCACGGACGGGAGGTGGCGGTGGTTTGAGGTAAGGAATTATTATTACATTGTCTTCTCACAGAGGACATGGTTCCACTACCTGACCACTAAAACCACACTCCACGTCTGTTGACAGAATTGTCTAGGTGCATTGGACGGTACACATATCAAAGTTAACGTAAGTGCGGCTGATCGACCCCGGTACAGGACTAGGAAAGGCGAAGTCGCCACGAACGTACTCGCTGTTTGCTCCCAAAATGGTGAGTTCATTTTCGTCTTCCCAGGATGGGAAGGATCAGCTTCAGACTCTAGGGTTCTTCGAGATGCAGTTTCTCGGCCAACTGGATTGAAAGTTCCACGTGGATACTACTACTTATGTGATGCCGGATATCCTAATGCAGAGGGATTCCTGGCTCCATATCGAAGCACACGCTACCATCTCACAGAATGGCGTGGAGGGAATCCACCGACGAACTCGAAGGAGCTGTTCAACATGAGACATTCATCAGCTCGTAATATCATCGAAAGAGCGTTCGGTCTGTTGAAGGGTCGATGGGCAATCTTGCGGGGAAAGTCGTTTTATCCAGTAGATGTGCAGATGAAAATGATAACTGCCTGTGCTTATCTCCACAACCTCATCGCCAGAGAAATAGGCCCCGATCCGAACTTAGAACCCGCTAACACCGGCGAGCTGGATTCCAACGGGATGACGAACGAGAACATAACGTTCGTGGAGAGCACTAGTGCATGGAGTGCATGGCGAGATGACTTAGCCCAGCGGATGTACGCTGACTGGAATAACGTATGA

mRNA sequence

ATGGATGGTCTAGACATAGAAGCTGAAGACTTGATCGCCATCCTTACTGTGATCTGTGCCACACAGTACCAATTCGTGGTTTCTTTGATCGGGATATTACATTGTGACAATAGAATTGATAATCAGTCTCCTCCTCACGTACGACATCAAATTAGACAACTAAACTTCTTCAGACTAATACATGAGGATGACTTAGCGTGTCGAGAGAACACTCGCATGGATAGGAGAACATTCACTGTCCTATGCTCCCTGTTACGAACGACAGGCAGATTGGAATCAACTAATTATGTCGACGTGGAGGAAATGGTTGCAATGTTTCTACATATCATTGCCCACGACATGAAGAATAGAGTCATACGACGACAGTTCGTGCGGTCGGGTGAGACCGTATCTAGGCACTTTAACGCTGTCCTGGATGCGATCCTCCGATTGCACTCGGTACTGCTAAAATCTCCTGAGCCAGTGACTAGCACAAGCACGGACGGGAGGTGGCGGTGGTTTGAGAATTGTCTAGGTGCATTGGACGGTACACATATCAAAGTTAACGTAAGTGCGGCTGATCGACCCCGGTACAGGACTAGGAAAGGCGAAGTCGCCACGAACGTACTCGCTGTTTGCTCCCAAAATGGTGAGTTCATTTTCGTCTTCCCAGGATGGGAAGGATCAGCTTCAGACTCTAGGGTTCTTCGAGATGCAGTTTCTCGGCCAACTGGATTGAAAGTTCCACGTGGATACTACTACTTATGTGATGCCGGATATCCTAATGCAGAGGGATTCCTGGCTCCATATCGAAGCACACGCTACCATCTCACAGAATGGCGTGGAGGGAATCCACCGACGAACTCGAAGGAGCTGTTCAACATGAGACATTCATCAGCTCGTAATATCATCGAAAGAGCGTTCGGTCTGTTGAAGGGTCGATGGGCAATCTTGCGGGGAAAGTCGTTTTATCCAGTAGATGTGCAGATGAAAATGATAACTGCCTGTGCTTATCTCCACAACCTCATCGCCAGAGAAATAGGCCCCGATCCGAACTTAGAACCCGCTAACACCGGCGAGCTGGATTCCAACGGGATGACGAACGAGAACATAACGTTCGTGGAGAGCACTAGTGCATGGAGTGCATGGCGAGATGACTTAGCCCAGCGGATGTACGCTGACTGGAATAACGTATGA

Coding sequence (CDS)

ATGGATGGTCTAGACATAGAAGCTGAAGACTTGATCGCCATCCTTACTGTGATCTGTGCCACACAGTACCAATTCGTGGTTTCTTTGATCGGGATATTACATTGTGACAATAGAATTGATAATCAGTCTCCTCCTCACGTACGACATCAAATTAGACAACTAAACTTCTTCAGACTAATACATGAGGATGACTTAGCGTGTCGAGAGAACACTCGCATGGATAGGAGAACATTCACTGTCCTATGCTCCCTGTTACGAACGACAGGCAGATTGGAATCAACTAATTATGTCGACGTGGAGGAAATGGTTGCAATGTTTCTACATATCATTGCCCACGACATGAAGAATAGAGTCATACGACGACAGTTCGTGCGGTCGGGTGAGACCGTATCTAGGCACTTTAACGCTGTCCTGGATGCGATCCTCCGATTGCACTCGGTACTGCTAAAATCTCCTGAGCCAGTGACTAGCACAAGCACGGACGGGAGGTGGCGGTGGTTTGAGAATTGTCTAGGTGCATTGGACGGTACACATATCAAAGTTAACGTAAGTGCGGCTGATCGACCCCGGTACAGGACTAGGAAAGGCGAAGTCGCCACGAACGTACTCGCTGTTTGCTCCCAAAATGGTGAGTTCATTTTCGTCTTCCCAGGATGGGAAGGATCAGCTTCAGACTCTAGGGTTCTTCGAGATGCAGTTTCTCGGCCAACTGGATTGAAAGTTCCACGTGGATACTACTACTTATGTGATGCCGGATATCCTAATGCAGAGGGATTCCTGGCTCCATATCGAAGCACACGCTACCATCTCACAGAATGGCGTGGAGGGAATCCACCGACGAACTCGAAGGAGCTGTTCAACATGAGACATTCATCAGCTCGTAATATCATCGAAAGAGCGTTCGGTCTGTTGAAGGGTCGATGGGCAATCTTGCGGGGAAAGTCGTTTTATCCAGTAGATGTGCAGATGAAAATGATAACTGCCTGTGCTTATCTCCACAACCTCATCGCCAGAGAAATAGGCCCCGATCCGAACTTAGAACCCGCTAACACCGGCGAGCTGGATTCCAACGGGATGACGAACGAGAACATAACGTTCGTGGAGAGCACTAGTGCATGGAGTGCATGGCGAGATGACTTAGCCCAGCGGATGTACGCTGACTGGAATAACGTATGA

Protein sequence

MDGLDIEAEDLIAILTVICATQYQFVVSLIGILHCDNRIDNQSPPHVRHQIRQLNFFRLIHEDDLACRENTRMDRRTFTVLCSLLRTTGRLESTNYVDVEEMVAMFLHIIAHDMKNRVIRRQFVRSGETVSRHFNAVLDAILRLHSVLLKSPEPVTSTSTDGRWRWFENCLGALDGTHIKVNVSAADRPRYRTRKGEVATNVLAVCSQNGEFIFVFPGWEGSASDSRVLRDAVSRPTGLKVPRGYYYLCDAGYPNAEGFLAPYRSTRYHLTEWRGGNPPTNSKELFNMRHSSARNIIERAFGLLKGRWAILRGKSFYPVDVQMKMITACAYLHNLIAREIGPDPNLEPANTGELDSNGMTNENITFVESTSAWSAWRDDLAQRMYADWNNV

Homology

[Close]

BLAST of Lcy09g014820 vs. ExPASy TrEMBL
Match: A0A5A7UST8 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold288G00660 PE=3 SV=1)

HSP 1 Score: 497.7 bits (1280), Expect = 4.5e-137
Identity = 231/348 (66.38%), Postives = 279/348 (80.17%), Query Frame = 0


Query: 43  SPPHVRHQIRQLNFFRLIHEDDLACRENTRMDRRTFTVLCSLLRTTGRLESTNYVDVEEM 102
           +PP  RH+IR+L +FR+IHE DL CR++TRMDRRTF +LC LLR    L ST  VDVEEM
Sbjct: 10  TPPDTRHRIRELAYFRMIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSSTEIVDVEEM 69

Query: 103 VAMFLHIIAHDMKNRVIRRQFVRSGETVSRHFNAVLDAILRLHSVLLKSPEPVTSTSTDG 162
           VAMFLH++AHD+KNRVI+R+FVRSGETVSRHFN VL A+LRL+  L+K P PVTS   D 
Sbjct: 70  VAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPVPVTSNCNDQ 129

Query: 163 RWRWFENCLGALDGTHIKVNVSAADRPRYRTRKGEVATNVLAVCSQNGEFIFVFPGWEGS 222
           RW+ FENCLGALDGT+IKVNV A DRP +RTRKGE+ATNVL VC   G+F++V  GWEGS
Sbjct: 130 RWKCFENCLGALDGTYIKVNVPAGDRPTFRTRKGEIATNVLGVCDTKGDFVYVLAGWEGS 189

Query: 223 ASDSRVLRDAVSRPTGLKVPRGYYYLCDAGYPNAEGFLAPYRSTRYHLTEWRG-GNPPTN 282
           A+DSR+LRDA+SR  GL+VP+GYYYLCDAGYPNAEGFLAPYR  RYHL EWRG  N PTN
Sbjct: 190 AADSRILRDAISRENGLQVPKGYYYLCDAGYPNAEGFLAPYRGQRYHLQEWRGAANAPTN 249

Query: 283 SKELFNMRHSSARNIIERAFGLLKGRWAILRGKSFYPVDVQMKMITACAYLHNLIAREIG 342
           +KE FNM+HSSARN+IERAFG+LKGRWAILRGKS+YP+ VQ + I ACA LHNLI RE+ 
Sbjct: 250 AKEYFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPLQVQCRTILACALLHNLINREMT 309

Query: 343 PDPNLEPANTGELD-SNGMTNENITFVESTSAWSAWRDDLAQRMYADW 389
              ++E  + G+   +    +E+I ++E+T+ WS WRDDLA  M+ DW
Sbjct: 310 YCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAASMFTDW 357

[Close]

BLAST of Lcy09g014820 vs. ExPASy TrEMBL
Match: A0A5D3DWU0 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G001160 PE=3 SV=1)

HSP 1 Score: 496.1 bits (1276), Expect = 1.3e-136
Identity = 231/348 (66.38%), Postives = 278/348 (79.89%), Query Frame = 0


Query: 43  SPPHVRHQIRQLNFFRLIHEDDLACRENTRMDRRTFTVLCSLLRTTGRLESTNYVDVEEM 102
           +PP  RH+IR+L +FR+IHE DL CR++TRMDRRTF +LC LLR    L ST  VDVEEM
Sbjct: 10  TPPDTRHRIRELAYFRMIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSSTEIVDVEEM 69

Query: 103 VAMFLHIIAHDMKNRVIRRQFVRSGETVSRHFNAVLDAILRLHSVLLKSPEPVTSTSTDG 162
           VAMFLH+IAHDMKN VI+R+FVRSGETVSRHFN VL A+LRL+  L+K P PVTS   D 
Sbjct: 70  VAMFLHVIAHDMKNHVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPVPVTSNCNDQ 129

Query: 163 RWRWFENCLGALDGTHIKVNVSAADRPRYRTRKGEVATNVLAVCSQNGEFIFVFPGWEGS 222
           RW+ FENCLGALDGT+IKVNV A DRP +RTRKGE+ATNVL VC   G+F++V  GWEGS
Sbjct: 130 RWKCFENCLGALDGTYIKVNVPAGDRPTFRTRKGEIATNVLGVCDTKGDFVYVLAGWEGS 189

Query: 223 ASDSRVLRDAVSRPTGLKVPRGYYYLCDAGYPNAEGFLAPYRSTRYHLTEWRG-GNPPTN 282
           A+DSR+LRDA+SR  GL+VP+GYYYLCDAGYPNAEGFLAPYR  RYHL EWRG  N PTN
Sbjct: 190 AADSRILRDAISRENGLQVPKGYYYLCDAGYPNAEGFLAPYRGQRYHLQEWRGAANAPTN 249

Query: 283 SKELFNMRHSSARNIIERAFGLLKGRWAILRGKSFYPVDVQMKMITACAYLHNLIAREIG 342
           +KE FNM+HSSARN+IERAFG+LKGRWAILRGKS+YP+ VQ + I ACA LHNLI RE+ 
Sbjct: 250 AKEYFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPLQVQCRTILACALLHNLINREMT 309

Query: 343 PDPNLEPANTGELD-SNGMTNENITFVESTSAWSAWRDDLAQRMYADW 389
              ++E  + G+   +    +E+I ++E+T+ WS WRD+LA  M+ DW
Sbjct: 310 YCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDNLAASMFTDW 357

[Close]

BLAST of Lcy09g014820 vs. ExPASy TrEMBL
Match: A0A5D3D7X8 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G001080 PE=3 SV=1)

HSP 1 Score: 495.7 bits (1275), Expect = 1.7e-136
Identity = 230/348 (66.09%), Postives = 279/348 (80.17%), Query Frame = 0


Query: 43  SPPHVRHQIRQLNFFRLIHEDDLACRENTRMDRRTFTVLCSLLRTTGRLESTNYVDVEEM 102
           +PP  RH+IR+L +FR+IHE DL CR++TRMDRRTF +LC LLR    L ST  VDVEEM
Sbjct: 10  TPPDTRHRIRELAYFRMIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSSTEIVDVEEM 69

Query: 103 VAMFLHIIAHDMKNRVIRRQFVRSGETVSRHFNAVLDAILRLHSVLLKSPEPVTSTSTDG 162
           VAMFLH++AHD+KNRVI+R+FVRSGETVSRHFN VL A+LRL+  L+K P PVTS   D 
Sbjct: 70  VAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPVPVTSNCNDQ 129

Query: 163 RWRWFENCLGALDGTHIKVNVSAADRPRYRTRKGEVATNVLAVCSQNGEFIFVFPGWEGS 222
           RW+ FENCLGALDGT+IKVNV A DRP +RTRKGE+ATNVL VC   G+F++V  GWEGS
Sbjct: 130 RWKCFENCLGALDGTYIKVNVPAGDRPTFRTRKGEIATNVLGVCDTKGDFVYVLAGWEGS 189

Query: 223 ASDSRVLRDAVSRPTGLKVPRGYYYLCDAGYPNAEGFLAPYRSTRYHLTEWRG-GNPPTN 282
           A+DSR+LRDA+SR  GL+VP+GYYYLCDAGYPNAEGFLAPYR  RYHL EWRG  N PTN
Sbjct: 190 AADSRILRDAISRENGLQVPKGYYYLCDAGYPNAEGFLAPYRGQRYHLQEWRGAANAPTN 249

Query: 283 SKELFNMRHSSARNIIERAFGLLKGRWAILRGKSFYPVDVQMKMITACAYLHNLIAREIG 342
           +KE FNM+HSSARN+IERAFG+LKGRWAILRGKS+YP+ VQ + I ACA LHNLI RE+ 
Sbjct: 250 AKEYFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPLQVQCRTILACALLHNLINREMT 309

Query: 343 PDPNLEPANTGELD-SNGMTNENITFVESTSAWSAWRDDLAQRMYADW 389
              ++E  + G+   +    +E+I ++E+T+ WS WRD+LA  M+ DW
Sbjct: 310 YCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDNLAASMFTDW 357

[Close]

BLAST of Lcy09g014820 vs. ExPASy TrEMBL
Match: A0A5A7VH63 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G001170 PE=3 SV=1)

HSP 1 Score: 495.0 bits (1273), Expect = 2.9e-136
Identity = 230/355 (64.79%), Postives = 281/355 (79.15%), Query Frame = 0


Query: 36  DNRIDNQSPPHVRHQIRQLNFFRLIHEDDLACRENTRMDRRTFTVLCSLLRTTGRLESTN 95
           +N+  + +PP  RH+IR+L +FR+IHE DL CR++TRMDRRTF +LC LLR    L ST 
Sbjct: 3   NNKRLSHTPPDTRHRIRELAYFRMIHEPDLVCRQSTRMDRRTFAILCHLLRNVAGLSSTE 62

Query: 96  YVDVEEMVAMFLHIIAHDMKNRVIRRQFVRSGETVSRHFNAVLDAILRLHSVLLKSPEPV 155
            VDVEEMVAMFLH++AHD+KNRVI+R+FVRSGETVSRHFN VL A+LRL+  L+K P PV
Sbjct: 63  IVDVEEMVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPVPV 122

Query: 156 TSTSTDGRWRWFENCLGALDGTHIKVNVSAADRPRYRTRKGEVATNVLAVCSQNGEFIFV 215
           TS   D RW+ FENCLGALDGT+IKVNV A DRP +RTRKGE+ATNVL VC   G+F++V
Sbjct: 123 TSNCNDQRWKCFENCLGALDGTYIKVNVPAGDRPTFRTRKGEIATNVLGVCDTKGDFVYV 182

Query: 216 FPGWEGSASDSRVLRDAVSRPTGLKVPRGYYYLCDAGYPNAEGFLAPYRSTRYHLTEWRG 275
             GWEGSA+DSR+LRDA+SR  GL+VP+GYYYLCDAGYPNAEGFLAPYR  RYHL EWRG
Sbjct: 183 LAGWEGSAADSRILRDAISRENGLQVPKGYYYLCDAGYPNAEGFLAPYRGQRYHLQEWRG 242

Query: 276 -GNPPTNSKELFNMRHSSARNIIERAFGLLKGRWAILRGKSFYPVDVQMKMITACAYLHN 335
             N PTN+KE FNM+HSSARN+ ERAFG+LKGRWAILRGKS+YP+ VQ + I ACA LHN
Sbjct: 243 AANAPTNAKEYFNMKHSSARNVTERAFGVLKGRWAILRGKSYYPLQVQCRTILACALLHN 302

Query: 336 LIAREIGPDPNLEPANTGELD-SNGMTNENITFVESTSAWSAWRDDLAQRMYADW 389
           LI RE+    ++E  + G+   +    +E+I ++E+T+ WS WRDDL   M+ DW
Sbjct: 303 LINREMTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLVASMFTDW 357

[Close]

BLAST of Lcy09g014820 vs. ExPASy TrEMBL
Match: A0A5A7TXW1 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G00370 PE=3 SV=1)

HSP 1 Score: 494.6 bits (1272), Expect = 3.8e-136
Identity = 239/386 (61.92%), Postives = 299/386 (77.46%), Query Frame = 0


Query: 6   IEAEDLIAILTVICATQYQFVVSLIGILHCDNRIDNQSPPHVRHQIRQLNFFRLIHEDDL 65
           ++  +L +I+    A+Q Q ++ ++ +L  D +     P   RH+IRQL +FR+IH  DL
Sbjct: 1   MDEHELASIVNAFIASQRQLLL-MLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDL 60

Query: 66  ACRENTRMDRRTFTVLCSLLRTTGRLESTNYVDVEEMVAMFLHIIAHDMKNRVIRRQFVR 125
            CR++TRMDRR F +LC LLRT   L ST  VDVEEMVAMFLHI+AHD+KNRVI+R+F+R
Sbjct: 61  VCRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMR 120

Query: 126 SGETVSRHFNAVLDAILRLHSVLLKSPEPVTSTSTDGRWRWFENCLGALDGTHIKVNVSA 185
           SGET+SRHFN VL A++RLH  LLK P+PV +  TD RWRWFENCLGALDGT+IKVNV A
Sbjct: 121 SGETISRHFNMVLLAVIRLHDELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPA 180

Query: 186 ADRPRYRTRKGEVATNVLAVCSQNGEFIFVFPGWEGSASDSRVLRDAVSRPTGLKVPRGY 245
           +DR RYRTRKGEVATNVL VC   G+F++V  GWEGSA+DSR+LRDA+SRP  LKVP+GY
Sbjct: 181 SDRARYRTRKGEVATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDALSRPNRLKVPKGY 240

Query: 246 YYLCDAGYPNAEGFLAPYRSTRYHLTEWRG-GNPPTNSKELFNMRHSSARNIIERAFGLL 305
           YYL DAGYPNAEGFLAPYR  RYHL EWRG  N P+ SKE FNM+HSSARN+IERAFG+L
Sbjct: 241 YYLVDAGYPNAEGFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVL 300

Query: 306 KGRWAILRGKSFYPVDVQMKMITACAYLHNLIAREIGPDPNLEPANTGELDSNGMTN--E 365
           KGRWAILRGKS+YPV+VQ + I AC  LHNLI RE+  + ++E  N  E+DS   T   +
Sbjct: 301 KGRWAILRGKSYYPVEVQCRTILACCLLHNLINREM-TNFDIED-NIDEVDSTHATTAAD 360

Query: 366 NITFVESTSAWSAWRDDLAQRMYADW 389
           +I ++E+++ WS WRD+LA+ M+ +W
Sbjct: 361 DIHYIETSNEWSQWRDNLAEEMFTEW 383

[Close]

BLAST of Lcy09g014820 vs. NCBI nr
Match: KAA0056561.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 497.7 bits (1280), Expect = 9.4e-137
Identity = 231/348 (66.38%), Postives = 279/348 (80.17%), Query Frame = 0


Query: 43  SPPHVRHQIRQLNFFRLIHEDDLACRENTRMDRRTFTVLCSLLRTTGRLESTNYVDVEEM 102
           +PP  RH+IR+L +FR+IHE DL CR++TRMDRRTF +LC LLR    L ST  VDVEEM
Sbjct: 10  TPPDTRHRIRELAYFRMIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSSTEIVDVEEM 69

Query: 103 VAMFLHIIAHDMKNRVIRRQFVRSGETVSRHFNAVLDAILRLHSVLLKSPEPVTSTSTDG 162
           VAMFLH++AHD+KNRVI+R+FVRSGETVSRHFN VL A+LRL+  L+K P PVTS   D 
Sbjct: 70  VAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPVPVTSNCNDQ 129

Query: 163 RWRWFENCLGALDGTHIKVNVSAADRPRYRTRKGEVATNVLAVCSQNGEFIFVFPGWEGS 222
           RW+ FENCLGALDGT+IKVNV A DRP +RTRKGE+ATNVL VC   G+F++V  GWEGS
Sbjct: 130 RWKCFENCLGALDGTYIKVNVPAGDRPTFRTRKGEIATNVLGVCDTKGDFVYVLAGWEGS 189

Query: 223 ASDSRVLRDAVSRPTGLKVPRGYYYLCDAGYPNAEGFLAPYRSTRYHLTEWRG-GNPPTN 282
           A+DSR+LRDA+SR  GL+VP+GYYYLCDAGYPNAEGFLAPYR  RYHL EWRG  N PTN
Sbjct: 190 AADSRILRDAISRENGLQVPKGYYYLCDAGYPNAEGFLAPYRGQRYHLQEWRGAANAPTN 249

Query: 283 SKELFNMRHSSARNIIERAFGLLKGRWAILRGKSFYPVDVQMKMITACAYLHNLIAREIG 342
           +KE FNM+HSSARN+IERAFG+LKGRWAILRGKS+YP+ VQ + I ACA LHNLI RE+ 
Sbjct: 250 AKEYFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPLQVQCRTILACALLHNLINREMT 309

Query: 343 PDPNLEPANTGELD-SNGMTNENITFVESTSAWSAWRDDLAQRMYADW 389
              ++E  + G+   +    +E+I ++E+T+ WS WRDDLA  M+ DW
Sbjct: 310 YCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAASMFTDW 357

[Close]

BLAST of Lcy09g014820 vs. NCBI nr
Match: TYK28297.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 496.1 bits (1276), Expect = 2.7e-136
Identity = 231/348 (66.38%), Postives = 278/348 (79.89%), Query Frame = 0


Query: 43  SPPHVRHQIRQLNFFRLIHEDDLACRENTRMDRRTFTVLCSLLRTTGRLESTNYVDVEEM 102
           +PP  RH+IR+L +FR+IHE DL CR++TRMDRRTF +LC LLR    L ST  VDVEEM
Sbjct: 10  TPPDTRHRIRELAYFRMIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSSTEIVDVEEM 69

Query: 103 VAMFLHIIAHDMKNRVIRRQFVRSGETVSRHFNAVLDAILRLHSVLLKSPEPVTSTSTDG 162
           VAMFLH+IAHDMKN VI+R+FVRSGETVSRHFN VL A+LRL+  L+K P PVTS   D 
Sbjct: 70  VAMFLHVIAHDMKNHVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPVPVTSNCNDQ 129

Query: 163 RWRWFENCLGALDGTHIKVNVSAADRPRYRTRKGEVATNVLAVCSQNGEFIFVFPGWEGS 222
           RW+ FENCLGALDGT+IKVNV A DRP +RTRKGE+ATNVL VC   G+F++V  GWEGS
Sbjct: 130 RWKCFENCLGALDGTYIKVNVPAGDRPTFRTRKGEIATNVLGVCDTKGDFVYVLAGWEGS 189

Query: 223 ASDSRVLRDAVSRPTGLKVPRGYYYLCDAGYPNAEGFLAPYRSTRYHLTEWRG-GNPPTN 282
           A+DSR+LRDA+SR  GL+VP+GYYYLCDAGYPNAEGFLAPYR  RYHL EWRG  N PTN
Sbjct: 190 AADSRILRDAISRENGLQVPKGYYYLCDAGYPNAEGFLAPYRGQRYHLQEWRGAANAPTN 249

Query: 283 SKELFNMRHSSARNIIERAFGLLKGRWAILRGKSFYPVDVQMKMITACAYLHNLIAREIG 342
           +KE FNM+HSSARN+IERAFG+LKGRWAILRGKS+YP+ VQ + I ACA LHNLI RE+ 
Sbjct: 250 AKEYFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPLQVQCRTILACALLHNLINREMT 309

Query: 343 PDPNLEPANTGELD-SNGMTNENITFVESTSAWSAWRDDLAQRMYADW 389
              ++E  + G+   +    +E+I ++E+T+ WS WRD+LA  M+ DW
Sbjct: 310 YCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDNLAASMFTDW 357

[Close]

BLAST of Lcy09g014820 vs. NCBI nr
Match: KAA0031556.1 (retrotransposon protein [Cucumis melo var. makuwa] >KAA0033743.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0036353.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0038064.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0038976.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 495.7 bits (1275), Expect = 3.6e-136
Identity = 230/348 (66.09%), Postives = 279/348 (80.17%), Query Frame = 0


Query: 43  SPPHVRHQIRQLNFFRLIHEDDLACRENTRMDRRTFTVLCSLLRTTGRLESTNYVDVEEM 102
           +PP  RH+IR+L +FR+IHE DL CR++TRMDRRTF +LC LLR    L ST  VDVEEM
Sbjct: 10  TPPDTRHRIRELAYFRMIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSSTEIVDVEEM 69

Query: 103 VAMFLHIIAHDMKNRVIRRQFVRSGETVSRHFNAVLDAILRLHSVLLKSPEPVTSTSTDG 162
           VAMFLH++AHD+KNRVI+R+FVRSGETVSRHFN VL A+LRL+  L+K P PVTS   D 
Sbjct: 70  VAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPVPVTSNCNDQ 129

Query: 163 RWRWFENCLGALDGTHIKVNVSAADRPRYRTRKGEVATNVLAVCSQNGEFIFVFPGWEGS 222
           RW+ FENCLGALDGT+IKVNV A DRP +RTRKGE+ATNVL VC   G+F++V  GWEGS
Sbjct: 130 RWKCFENCLGALDGTYIKVNVPAGDRPTFRTRKGEIATNVLGVCDTKGDFVYVLAGWEGS 189

Query: 223 ASDSRVLRDAVSRPTGLKVPRGYYYLCDAGYPNAEGFLAPYRSTRYHLTEWRG-GNPPTN 282
           A+DSR+LRDA+SR  GL+VP+GYYYLCDAGYPNAEGFLAPYR  RYHL EWRG  N PTN
Sbjct: 190 AADSRILRDAISRENGLQVPKGYYYLCDAGYPNAEGFLAPYRGQRYHLQEWRGAANAPTN 249

Query: 283 SKELFNMRHSSARNIIERAFGLLKGRWAILRGKSFYPVDVQMKMITACAYLHNLIAREIG 342
           +KE FNM+HSSARN+IERAFG+LKGRWAILRGKS+YP+ VQ + I ACA LHNLI RE+ 
Sbjct: 250 AKEYFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPLQVQCRTILACALLHNLINREMT 309

Query: 343 PDPNLEPANTGELD-SNGMTNENITFVESTSAWSAWRDDLAQRMYADW 389
              ++E  + G+   +    +E+I ++E+T+ WS WRD+LA  M+ DW
Sbjct: 310 YCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDNLAASMFTDW 357

[Close]

BLAST of Lcy09g014820 vs. NCBI nr
Match: KAA0064809.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 495.0 bits (1273), Expect = 6.1e-136
Identity = 230/355 (64.79%), Postives = 281/355 (79.15%), Query Frame = 0


Query: 36  DNRIDNQSPPHVRHQIRQLNFFRLIHEDDLACRENTRMDRRTFTVLCSLLRTTGRLESTN 95
           +N+  + +PP  RH+IR+L +FR+IHE DL CR++TRMDRRTF +LC LLR    L ST 
Sbjct: 3   NNKRLSHTPPDTRHRIRELAYFRMIHEPDLVCRQSTRMDRRTFAILCHLLRNVAGLSSTE 62

Query: 96  YVDVEEMVAMFLHIIAHDMKNRVIRRQFVRSGETVSRHFNAVLDAILRLHSVLLKSPEPV 155
            VDVEEMVAMFLH++AHD+KNRVI+R+FVRSGETVSRHFN VL A+LRL+  L+K P PV
Sbjct: 63  IVDVEEMVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPVPV 122

Query: 156 TSTSTDGRWRWFENCLGALDGTHIKVNVSAADRPRYRTRKGEVATNVLAVCSQNGEFIFV 215
           TS   D RW+ FENCLGALDGT+IKVNV A DRP +RTRKGE+ATNVL VC   G+F++V
Sbjct: 123 TSNCNDQRWKCFENCLGALDGTYIKVNVPAGDRPTFRTRKGEIATNVLGVCDTKGDFVYV 182

Query: 216 FPGWEGSASDSRVLRDAVSRPTGLKVPRGYYYLCDAGYPNAEGFLAPYRSTRYHLTEWRG 275
             GWEGSA+DSR+LRDA+SR  GL+VP+GYYYLCDAGYPNAEGFLAPYR  RYHL EWRG
Sbjct: 183 LAGWEGSAADSRILRDAISRENGLQVPKGYYYLCDAGYPNAEGFLAPYRGQRYHLQEWRG 242

Query: 276 -GNPPTNSKELFNMRHSSARNIIERAFGLLKGRWAILRGKSFYPVDVQMKMITACAYLHN 335
             N PTN+KE FNM+HSSARN+ ERAFG+LKGRWAILRGKS+YP+ VQ + I ACA LHN
Sbjct: 243 AANAPTNAKEYFNMKHSSARNVTERAFGVLKGRWAILRGKSYYPLQVQCRTILACALLHN 302

Query: 336 LIAREIGPDPNLEPANTGELD-SNGMTNENITFVESTSAWSAWRDDLAQRMYADW 389
           LI RE+    ++E  + G+   +    +E+I ++E+T+ WS WRDDL   M+ DW
Sbjct: 303 LINREMTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLVASMFTDW 357

[Close]

BLAST of Lcy09g014820 vs. NCBI nr
Match: KAA0035620.1 (retrotransposon protein [Cucumis melo var. makuwa] >KAA0038121.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0041646.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0047363.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0048378.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 494.6 bits (1272), Expect = 7.9e-136
Identity = 239/386 (61.92%), Postives = 299/386 (77.46%), Query Frame = 0


Query: 6   IEAEDLIAILTVICATQYQFVVSLIGILHCDNRIDNQSPPHVRHQIRQLNFFRLIHEDDL 65
           ++  +L +I+    A+Q Q ++ ++ +L  D +     P   RH+IRQL +FR+IH  DL
Sbjct: 1   MDEHELASIVNAFIASQRQLLL-MLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDL 60

Query: 66  ACRENTRMDRRTFTVLCSLLRTTGRLESTNYVDVEEMVAMFLHIIAHDMKNRVIRRQFVR 125
            CR++TRMDRR F +LC LLRT   L ST  VDVEEMVAMFLHI+AHD+KNRVI+R+F+R
Sbjct: 61  VCRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMR 120

Query: 126 SGETVSRHFNAVLDAILRLHSVLLKSPEPVTSTSTDGRWRWFENCLGALDGTHIKVNVSA 185
           SGET+SRHFN VL A++RLH  LLK P+PV +  TD RWRWFENCLGALDGT+IKVNV A
Sbjct: 121 SGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPA 180

Query: 186 ADRPRYRTRKGEVATNVLAVCSQNGEFIFVFPGWEGSASDSRVLRDAVSRPTGLKVPRGY 245
           +DR RYRTRKGEVATNVL VC   G+F++V  GWEGSA+DSR+LRDA+SRP  LKVP+GY
Sbjct: 181 SDRARYRTRKGEVATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDALSRPNRLKVPKGY 240

Query: 246 YYLCDAGYPNAEGFLAPYRSTRYHLTEWRG-GNPPTNSKELFNMRHSSARNIIERAFGLL 305
           YYL DAGYPNAEGFLAPYR  RYHL EWRG  N P+ SKE FNM+HSSARN+IERAFG+L
Sbjct: 241 YYLVDAGYPNAEGFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVL 300

Query: 306 KGRWAILRGKSFYPVDVQMKMITACAYLHNLIAREIGPDPNLEPANTGELDSNGMTN--E 365
           KGRWAILRGKS+YPV+VQ + I AC  LHNLI RE+  + ++E  N  E+DS   T   +
Sbjct: 301 KGRWAILRGKSYYPVEVQCRTILACCLLHNLINREM-TNFDIED-NIDEVDSTHATTAAD 360

Query: 366 NITFVESTSAWSAWRDDLAQRMYADW 389
           +I ++E+++ WS WRD+LA+ M+ +W
Sbjct: 361 DIHYIETSNEWSQWRDNLAEEMFTEW 383

[Close]

BLAST of Lcy09g014820 vs. TAIR 10
Match: AT5G41980.1 (CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 206.8 bits (525), Expect = 3.1e-53
Identity = 107/283 (37.81%), Postives = 157/283 (55.48%), Query Frame = 0


Query: 57  FRLIHEDDLACRENTRMDRRTFTVLCSLLRTTGRLESTNYVDVEEMVAMFLHIIAHDMKN 116
           +++++  +  C EN RMD+  F  LC LL+T G L  TN + +E  +A+FL II H+++ 
Sbjct: 32  YQILNGPNEQCFENFRMDKPVFYKLCDLLQTRGLLRHTNRIKIEAQLAIFLFIIGHNLRT 91

Query: 117 RVIRRQFVRSGETVSRHFNAVLDAILRLHSVLLKSPEPVTSTSTDGRWRWFENCLGALDG 176
           R ++  F  SGET+SRHFN VL+A++ +     +      +   D    +F++C+G +D 
Sbjct: 92  RAVQELFCYSGETISRHFNNVLNAVIAISKDFFQPNSNSDTLENDD--PYFKDCVGVVDS 151

Query: 177 THIKVNVSAADRPRYRTRKGEVATNVLAVCSQNGEFIFVFPGWEGSASDSRVLRDAVSRP 236
            HI V V   ++  +R   G +  NVLA  S +  F +V  GWEGSASD +VL  A++R 
Sbjct: 152 FHIPVMVGVDEQGPFRNGNGLLTQNVLAASSFDLRFNYVLAGWEGSASDQQVLNAALTRR 211

Query: 237 TGLKVPRGYYYLCDAGYPNAEGFLAPYRSTRYHLTEWRGGNPPTNSKELFNMRHSSARNI 296
             L+VP+G YY+ D  YPN  GF+APY             N    +KE+FN RH      
Sbjct: 212 NKLQVPQGKYYIVDNKYPNLPGFIAPYHGV--------STNSREEAKEMFNERHKLLHRA 271

Query: 297 IERAFGLLKGRWAILRGKSFYPVDVQMKMITACAYLHNLIARE 340
           I R FG LK R+ IL     YP+  Q+K++ A   LHN +  E
Sbjct: 272 IHRTFGALKERFPILLSAPPYPLQTQVKLVIAACALHNYVRLE 304

[Close]

BLAST of Lcy09g014820 vs. TAIR 10
Match: AT1G43722.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G28730.1); Has 924 Blast hits to 912 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 222; Fungi - 31; Plants - 661; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 168.3 bits (425), Expect = 1.2e-41
Identity = 97/284 (34.15%), Postives = 147/284 (51.76%), Query Frame = 0


Query: 37  NRIDNQSPPHVRHQIRQLNFFRLIHEDDLACRENTRMDRRTFTVLCSLLRTTGRLESTNY 96
           +R   ++P  +   +   N +R + +D  AC +  RM    FT LC++L+T   L+ T  
Sbjct: 36  DRYFQRAPVQIDRGLGWRNIWRRLQQDAAACLQLLRMSLPCFTTLCNMLQTNYDLQPTLN 95

Query: 97  VDVEEMVAMFLHIIAHDMKNRVIRRQFVRSGETVSRHFNAVLDAILRLHSVLLKSPE--- 156
           + +EE VAMFL I  H+   R +  +F R+ ETV R F  VL A   L    +++P    
Sbjct: 96  ISIEESVAMFLRICGHNEVYRDVGLRFGRNQETVQRKFREVLTATELLACDYIRTPTRQE 155

Query: 157 ----PVTSTSTDGRWRWFENCLGALDGTHIKVNVSAADRPRYRTRKGEVATNVLAVCSQN 216
               P         W +F   +GA+DGTH+ V V    +  Y  R    + N++A+C   
Sbjct: 156 LYRIPERLQVDQRYWPYFSGFVGAMDGTHVCVKVKPDLQGMYWNRHDNASLNIMAICDLK 215

Query: 217 GEFIFVFPGWEGSASDSRVLRDAVSRPTGLKVPRG-YYYLCDAGYPNAEGFLAPYRST-- 276
             F +++ G  GS  D+ VL+ A    +   +P    YYL D+GYPN +G LAPYRS+  
Sbjct: 216 MLFTYIWNGAPGSCYDTAVLQIAQQSDSEFPLPPSEKYYLVDSGYPNKQGLLAPYRSSRN 275

Query: 277 ---RYHLTEWRGGNPPTNSKELFNMRHSSARNIIERAFGLLKGR 308
              RYH++++  G  P N  ELFN  H+S R++IER F + K +
Sbjct: 276 RVVRYHMSQFYYGPRPRNKHELFNQCHTSLRSVIERTFRIWKNK 319

[Close]

BLAST of Lcy09g014820 vs. TAIR 10
Match: AT5G35695.1 (CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41980.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 123.6 bits (309), Expect = 3.4e-28
Identity = 74/195 (37.95%), Postives = 100/195 (51.28%), Query Frame = 0


Query: 212 FIFVFPGWEGSASDSRVLRDAVSRPTGLKVPRGYYYLCDAGYPNAEGFLAPYRSTRYHLT 271
           FI+V  GWEGSA DSRVL DA+ +          +YL D G+ N   FLAP+R  RYHL 
Sbjct: 25  FIYVLSGWEGSAHDSRVLSDALRK----------FYLVDCGFANRLNFLAPFRGVRYHLQ 84

Query: 272 EWRG-GNPPTNSKELFNMRHSSARNIIERAFGLLKGRWAILRGKSFYPVDVQMKMITACA 331
           E+ G    P    ELFN+RH S RN+IER FG+ K R+AI +    +    Q  ++  CA
Sbjct: 85  EFAGQRRDPETPHELFNLRHVSLRNVIERIFGIFKSRFAIFKSAPPFSYKKQAGLVLTCA 144

Query: 332 YLHNLIAREIGPD----PNLEPANTGEL---DSNGMTNENITFVESTSA-------WSAW 391
            LHN + +E   D    P+ E  N G++   + N M    I   E   A        + W
Sbjct: 145 ALHNFLRKECRSDEADFPD-EVGNEGDVVNNEGNAMNTNEIDNEEPLEAQKQDRENTNMW 204

[Close]

BLAST of Lcy09g014820 vs. TAIR 10
Match: AT5G28730.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 496 Blast hits to 496 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 23; Plants - 470; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 93.6 bits (231), Expect = 3.8e-19
Identity = 66/206 (32.04%), Postives = 98/206 (47.57%), Query Frame = 0


Query: 60  IHEDDLACRENTRMDRRTFTVLCSLLRTTGRLESTNYVDVEEMVAMFLHIIAHDMKNRVI 119
           I+ ++++C+   RM    FT LC +L     L+S+  + ++E VA+FL I A +   R I
Sbjct: 17  IYSNEVSCQTLIRMSSEAFTQLCEILHGKYGLQSSTNISLDESVAIFLIICASNDTQRDI 76

Query: 120 RRQFVRSGETVSRHFNAVLDAILRLHSVLLKSPEPVTSTSTDGRWRWFENCLGALDGTHI 179
             +F  + ET+ R F+ VL A+ RL    ++  +     +   R +         D T  
Sbjct: 77  ALRFGHAQETIWRKFHDVLKAMERLAVEYIRPRKVEELRAISNRLQ---------DDTRY 136

Query: 180 KVNVSAADRPRYRTRKGEVATNVLAVCSQNGEFIFVFPGWEGSASDSRVLRDAVSRPTGL 239
                    P      G  + NVLA+C  +  F + F G  GS  D+RVL  A+S     
Sbjct: 137 --------WPFLMDLLGIASFNVLAICDLDMLFTYCFVGMAGSTHDARVLSAAISDDPLF 196

Query: 240 KV-PRGYYYLCDAGYPNAEGFLAPYR 265
            V P   YYL D+GY N  G+LAPYR
Sbjct: 197 HVPPDSKYYLVDSGYANKRGYLAPYR 205

[Close]

BLAST of Lcy09g014820 vs. TAIR 10
Match: AT5G28950.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41980.1); Has 448 Blast hits to 446 proteins in 74 species: Archae - 0; Bacteria - 0; Metazoa - 31; Fungi - 21; Plants - 396; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 85.5 bits (210), Expect = 1.0e-16
Identity = 38/78 (48.72%), Postives = 56/78 (71.79%), Query Frame = 0


Query: 166 WFENCLGALDGTHIKVNVSAADRPRYRTRKGEVATNVLAVCSQNGEFIFVFPGWEGSASD 225
           +F++C+GA+D THI   VS    P +R RKG+++ N+LA C+ + EF++V  GWEGSA D
Sbjct: 21  YFKDCVGAIDDTHIFAMVSQKKMPSFRNRKGDISQNMLAACNFDVEFMYVLSGWEGSAHD 80

Query: 226 SRVLRDAVSRPTG-LKVP 243
           S+VL DA++R +  L VP
Sbjct: 81  SKVLNDALTRNSNRLPVP 98

The following BLAST results are available for this feature:

BLAST of Lcy09g014820 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy09g014820 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UST8	4.5e-137	66.38	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3DWU0	1.3e-136	66.38	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3D7X8	1.7e-136	66.09	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7VH63	2.9e-136	64.79	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7TXW1	3.8e-136	61.92	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Lcy09g014820 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0056561.1	9.4e-137	66.38	retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYK28297.1	2.7e-136	66.38	retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0031556.1	3.6e-136	66.09	retrotransposon protein [Cucumis melo var. makuwa] >KAA0033743.1 retrotransposon...	[more]
KAA0064809.1	6.1e-136	64.79	retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0035620.1	7.9e-136	61.92	retrotransposon protein [Cucumis melo var. makuwa] >KAA0038121.1 retrotransposon...	[more]

BLAST of Lcy09g014820 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G41980.1	3.1e-53	37.81	CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (Int...	[more]
AT1G43722.1	1.2e-41	34.15	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G35695.1	3.4e-28	37.95	CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (Int...	[more]
AT5G28730.1	3.8e-19	32.04	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G28950.1	1.0e-16	48.72	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027806	Harbinger transposase-derived nuclease domain	PFAM	PF13359	DDE_Tnp_4	coord: 174..334 e-value: 1.2E-30 score: 106.3
None	No IPR available	PANTHER	PTHR22930	UNCHARACTERIZED	coord: 7..386
None	No IPR available	PANTHER	PTHR22930:SF201	NUCLEASE HARBI1-LIKE PROTEIN	coord: 7..386

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy09g014820.1	Lcy09g014820.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding