Lcy09g014660 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy09g014660
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	L10-interacting MYB domain-containing protein-like
Location	Chr09: 18290903 .. 18291267 (+)
RNA-Seq Expression	Lcy09g014660
Synteny	Lcy09g014660

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAGGAAATGGTTGGGATCCATTATTGGGCACTATCACCCTAGAAGGAGAGCAATGGAATGATCTTTTTAAGGTATAAATTAATAGCAAGTGTTTTCGACTTCAATGTCTAATCATATATTGAACTATGGTTGATTTTATGTATTATTGTGAAATTCCTTATAGGTCAATAGGAGAGCTAAGAGGTTTAAAAAAAGTGGTTGCACGCATTATGCAAAGCTTATGAGAATTTTTGGAGACACTACAGCTACAGGTGCTAGTGCTTGTCCATCAACAAAGCTTCCTTTAGATTCTGAAGAAGAAAATGATGTTGGAAGCAATACAAATTTTACTGGTGAAGAAAATGGTCTTGAAAAAAAGTAG

mRNA sequence

ATGTCAGGAAATGGTTGGGATCCATTATTGGGCACTATCACCCTAGAAGGAGAGCAATGGAATGATCTTTTTAAGGTCAATAGGAGAGCTAAGAGGTTTAAAAAAAGTGGTTGCACGCATTATGCAAAGCTTATGAGAATTTTTGGAGACACTACAGCTACAGGTGCTAGTGCTTGTCCATCAACAAAGCTTCCTTTAGATTCTGAAGAAGAAAATGATGTTGGAAGCAATACAAATTTTACTGGTGAAGAAAATGGTCTTGAAAAAAAGTAG

Coding sequence (CDS)

ATGTCAGGAAATGGTTGGGATCCATTATTGGGCACTATCACCCTAGAAGGAGAGCAATGGAATGATCTTTTTAAGGTCAATAGGAGAGCTAAGAGGTTTAAAAAAAGTGGTTGCACGCATTATGCAAAGCTTATGAGAATTTTTGGAGACACTACAGCTACAGGTGCTAGTGCTTGTCCATCAACAAAGCTTCCTTTAGATTCTGAAGAAGAAAATGATGTTGGAAGCAATACAAATTTTACTGGTGAAGAAAATGGTCTTGAAAAAAAGTAG

Protein sequence

MSGNGWDPLLGTITLEGEQWNDLFKVNRRAKRFKKSGCTHYAKLMRIFGDTTATGASACPSTKLPLDSEEENDVGSNTNFTGEENGLEKK

Homology

[Close]

BLAST of Lcy09g014660 vs. ExPASy TrEMBL
Match: A0A5D3BNQ5 (L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold233G00100 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.4e-28
Identity = 66/91 (72.53%), Postives = 75/91 (82.42%), Query Frame = 0


Query: 1  MSGNGWDPLLGTITLEGEQWNDLFKVNRRAKRFKKSGCTHYAKLMRIFGDTTATGASACP 60
          M+GNGWDPLLGTI LE EQWN+LFKVN+RAK+F+KSGC HY KL+RIFGDTTATG +ACP
Sbjct: 1  MTGNGWDPLLGTINLEEEQWNELFKVNKRAKKFRKSGCPHYEKLVRIFGDTTATGVNACP 60

Query: 61 STKLPLDSEE--ENDVGSNTNFTGEENGLEK 90
          ST+L  DSE+  ENDV SNTN   EEN   K
Sbjct: 61 STRLISDSEDENENDVASNTNVGVEENNKGK 91

[Close]

BLAST of Lcy09g014660 vs. ExPASy TrEMBL
Match: A0A5A7UIT7 (L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold190G001920 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.4e-28
Identity = 66/91 (72.53%), Postives = 75/91 (82.42%), Query Frame = 0


Query: 1  MSGNGWDPLLGTITLEGEQWNDLFKVNRRAKRFKKSGCTHYAKLMRIFGDTTATGASACP 60
          M+GNGWDPLLGTI LE EQWN+LFKVN+RAK+F+KSGC HY KL+RIFGDTTATG +ACP
Sbjct: 1  MTGNGWDPLLGTINLEEEQWNELFKVNKRAKKFRKSGCPHYEKLVRIFGDTTATGVNACP 60

Query: 61 STKLPLDSEE--ENDVGSNTNFTGEENGLEK 90
          ST+L  DSE+  ENDV SNTN   EEN   K
Sbjct: 61 STRLISDSEDENENDVASNTNVGVEENNKGK 91

[Close]

BLAST of Lcy09g014660 vs. ExPASy TrEMBL
Match: A0A1S3CTN1 (uncharacterized protein LOC103504323 OS=Cucumis melo OX=3656 GN=LOC103504323 PE=4 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.8e-28
Identity = 65/91 (71.43%), Postives = 75/91 (82.42%), Query Frame = 0


Query: 1   MSGNGWDPLLGTITLEGEQWNDLFKVNRRAKRFKKSGCTHYAKLMRIFGDTTATGASACP 60
           M+GNGWDPLLGT+ LE EQWN+LFKVN+RAK+F+KSGC HY KL+RIFGDTTATG +ACP
Sbjct: 39  MTGNGWDPLLGTVNLEKEQWNELFKVNKRAKKFRKSGCPHYEKLIRIFGDTTATGVNACP 98

Query: 61  STKLPLDSEE--ENDVGSNTNFTGEENGLEK 90
           ST+L  DSE+  ENDV SNTN   EEN   K
Sbjct: 99  STRLISDSEDENENDVASNTNVGVEENNKGK 129

[Close]

BLAST of Lcy09g014660 vs. ExPASy TrEMBL
Match: A0A5D3C535 (L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold157G00490 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.5e-27
Identity = 65/91 (71.43%), Postives = 74/91 (81.32%), Query Frame = 0


Query: 1  MSGNGWDPLLGTITLEGEQWNDLFKVNRRAKRFKKSGCTHYAKLMRIFGDTTATGASACP 60
          M+GN WDPLLGTI LE EQWN+LFKVN+RAK+F+KSGC HY KL+RIFGDTTATG +ACP
Sbjct: 1  MTGNCWDPLLGTINLEEEQWNELFKVNKRAKKFRKSGCPHYEKLVRIFGDTTATGVNACP 60

Query: 61 STKLPLDSEE--ENDVGSNTNFTGEENGLEK 90
          ST+L  DSE+  ENDV SNTN   EEN   K
Sbjct: 61 STRLISDSEDENENDVASNTNVGVEENNKGK 91

[Close]

BLAST of Lcy09g014660 vs. ExPASy TrEMBL
Match: A0A5A7V5Z1 (L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold455G00520 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.5e-27
Identity = 65/91 (71.43%), Postives = 74/91 (81.32%), Query Frame = 0


Query: 1  MSGNGWDPLLGTITLEGEQWNDLFKVNRRAKRFKKSGCTHYAKLMRIFGDTTATGASACP 60
          M+GN WDPLLGTI LE EQWN+LFKVN+RAK+F+KSGC HY KL+RIFGDTTATG +ACP
Sbjct: 1  MTGNCWDPLLGTINLEEEQWNELFKVNKRAKKFRKSGCPHYEKLVRIFGDTTATGVNACP 60

Query: 61 STKLPLDSEE--ENDVGSNTNFTGEENGLEK 90
          ST+L  DSE+  ENDV SNTN   EEN   K
Sbjct: 61 STRLISDSEDENENDVASNTNVGVEENNKGK 91

[Close]

BLAST of Lcy09g014660 vs. NCBI nr
Match: KAA0053615.1 (L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 135.2 bits (339), Expect = 2.8e-28
Identity = 66/91 (72.53%), Postives = 75/91 (82.42%), Query Frame = 0


Query: 1  MSGNGWDPLLGTITLEGEQWNDLFKVNRRAKRFKKSGCTHYAKLMRIFGDTTATGASACP 60
          M+GNGWDPLLGTI LE EQWN+LFKVN+RAK+F+KSGC HY KL+RIFGDTTATG +ACP
Sbjct: 1  MTGNGWDPLLGTINLEEEQWNELFKVNKRAKKFRKSGCPHYEKLVRIFGDTTATGVNACP 60

Query: 61 STKLPLDSEE--ENDVGSNTNFTGEENGLEK 90
          ST+L  DSE+  ENDV SNTN   EEN   K
Sbjct: 61 STRLISDSEDENENDVASNTNVGVEENNKGK 91

[Close]

BLAST of Lcy09g014660 vs. NCBI nr
Match: TYJ96795.1 (L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa] >TYK00864.1 L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa] >TYK19200.1 L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 135.2 bits (339), Expect = 2.8e-28
Identity = 66/91 (72.53%), Postives = 75/91 (82.42%), Query Frame = 0


Query: 1  MSGNGWDPLLGTITLEGEQWNDLFKVNRRAKRFKKSGCTHYAKLMRIFGDTTATGASACP 60
          M+GNGWDPLLGTI LE EQWN+LFKVN+RAK+F+KSGC HY KL+RIFGDTTATG +ACP
Sbjct: 1  MTGNGWDPLLGTINLEEEQWNELFKVNKRAKKFRKSGCPHYEKLVRIFGDTTATGVNACP 60

Query: 61 STKLPLDSEE--ENDVGSNTNFTGEENGLEK 90
          ST+L  DSE+  ENDV SNTN   EEN   K
Sbjct: 61 STRLISDSEDENENDVASNTNVGVEENNKGK 91

[Close]

BLAST of Lcy09g014660 vs. NCBI nr
Match: XP_008466944.1 (PREDICTED: uncharacterized protein LOC103504323 [Cucumis melo])

HSP 1 Score: 134.8 bits (338), Expect = 3.7e-28
Identity = 65/91 (71.43%), Postives = 75/91 (82.42%), Query Frame = 0


Query: 1   MSGNGWDPLLGTITLEGEQWNDLFKVNRRAKRFKKSGCTHYAKLMRIFGDTTATGASACP 60
           M+GNGWDPLLGT+ LE EQWN+LFKVN+RAK+F+KSGC HY KL+RIFGDTTATG +ACP
Sbjct: 39  MTGNGWDPLLGTVNLEKEQWNELFKVNKRAKKFRKSGCPHYEKLIRIFGDTTATGVNACP 98

Query: 61  STKLPLDSEE--ENDVGSNTNFTGEENGLEK 90
           ST+L  DSE+  ENDV SNTN   EEN   K
Sbjct: 99  STRLISDSEDENENDVASNTNVGVEENNKGK 129

[Close]

BLAST of Lcy09g014660 vs. NCBI nr
Match: KAA0061221.1 (L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 131.7 bits (330), Expect = 3.1e-27
Identity = 65/91 (71.43%), Postives = 74/91 (81.32%), Query Frame = 0


Query: 1  MSGNGWDPLLGTITLEGEQWNDLFKVNRRAKRFKKSGCTHYAKLMRIFGDTTATGASACP 60
          M+GN WDPLLGTI LE EQWN+LFKVN+RAK+F+KSGC HY KL+RIFGDTTATG +ACP
Sbjct: 1  MTGNCWDPLLGTINLEEEQWNELFKVNKRAKKFRKSGCPHYEKLVRIFGDTTATGVNACP 60

Query: 61 STKLPLDSEE--ENDVGSNTNFTGEENGLEK 90
          ST+L  DSE+  ENDV SNTN   EEN   K
Sbjct: 61 STRLISDSEDENENDVASNTNVGVEENNKGK 91

[Close]

BLAST of Lcy09g014660 vs. NCBI nr
Match: TYK06268.1 (L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 131.7 bits (330), Expect = 3.1e-27
Identity = 65/91 (71.43%), Postives = 74/91 (81.32%), Query Frame = 0


Query: 1  MSGNGWDPLLGTITLEGEQWNDLFKVNRRAKRFKKSGCTHYAKLMRIFGDTTATGASACP 60
          M+GN WDPLLGTI LE EQWN+LFKVN+RAK+F+KSGC HY KL+RIFGDTTATG +ACP
Sbjct: 1  MTGNCWDPLLGTINLEEEQWNELFKVNKRAKKFRKSGCPHYEKLVRIFGDTTATGVNACP 60

Query: 61 STKLPLDSEE--ENDVGSNTNFTGEENGLEK 90
          ST+L  DSE+  ENDV SNTN   EEN   K
Sbjct: 61 STRLISDSEDENENDVASNTNVGVEENNKGK 91

The following BLAST results are available for this feature:

BLAST of Lcy09g014660 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy09g014660 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BNQ5	1.4e-28	72.53	L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa O...	[more]
A0A5A7UIT7	1.4e-28	72.53	L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa O...	[more]
A0A1S3CTN1	1.8e-28	71.43	uncharacterized protein LOC103504323 OS=Cucumis melo OX=3656 GN=LOC103504323 PE=...	[more]
A0A5D3C535	1.5e-27	71.43	L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa O...	[more]
A0A5A7V5Z1	1.5e-27	71.43	L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa O...	[more]

BLAST of Lcy09g014660 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0053615.1	2.8e-28	72.53	L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa]	[more]
TYJ96795.1	2.8e-28	72.53	L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa] >T...	[more]
XP_008466944.1	3.7e-28	71.43	PREDICTED: uncharacterized protein LOC103504323 [Cucumis melo]	[more]
KAA0061221.1	3.1e-27	71.43	L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa]	[more]
TYK06268.1	3.1e-27	71.43	L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa]	[more]

BLAST of Lcy09g014660 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 61..90
None	No IPR available	PANTHER	PTHR47584	FAMILY NOT NAMED	coord: 2..75
None	No IPR available	PANTHER	PTHR47584:SF11	L10-INTERACTING MYB DOMAIN-CONTAINING PROTEIN-LIKE	coord: 2..75

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy09g014660.1	Lcy09g014660.1	mRNA