Lcy09g014350 (gene) Sponge gourd (P93075) v1

Overview
NameLcy09g014350
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionUnknown protein
LocationChr09: 16652041 .. 16652193 (-)
RNA-Seq ExpressionLcy09g014350
SyntenyLcy09g014350
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTAAGAACATTAGTAAAGATTCGGCGTTGGACCTCAGCAAGCTCCTTGGGATCAAGTTAGTGGACTCTTTGGGTTACTACCTTGGTATGCCCACTCAAATGGGGCGCAAAAAACACCAGGTGTTTTGGAAGGTGAAAGAGAGTATTTAG

mRNA sequence

ATGAGTAAGAACATTAGTAAAGATTCGGCGTTGGACCTCAGCAAGCTCCTTGGGATCAAGTTAGTGGACTCTTTGGGTTACTACCTTGGTATGCCCACTCAAATGGGGCGCAAAAAACACCAGGTGTTTTGGAAGGTGAAAGAGAGTATTTAG

Coding sequence (CDS)

ATGAGTAAGAACATTAGTAAAGATTCGGCGTTGGACCTCAGCAAGCTCCTTGGGATCAAGTTAGTGGACTCTTTGGGTTACTACCTTGGTATGCCCACTCAAATGGGGCGCAAAAAACACCAGGTGTTTTGGAAGGTGAAAGAGAGTATTTAG

Protein sequence

MSKNISKDSALDLSKLLGIKLVDSLGYYLGMPTQMGRKKHQVFWKVKESI
Homology
[Close]
BLAST of Lcy09g014350 vs. ExPASy TrEMBL
Match: A0A803NUR0 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 4.9e-04
Identity = 21/48 (43.75%), Postives = 37/48 (77.08%), Query Frame = 0 

Query: 3   KNISKDSALDLSKLLGIKLVDSLGYYLGMPTQMGRKKHQVFWKVKESI 51
           KN+ ++  L L+++LG+K+VD+ G+YLG+P+ +GRKK +VF  +K  +
Sbjct: 685 KNVPRERRLVLARILGVKMVDNQGFYLGLPSFVGRKKKEVFEYIKNRV 732

The following BLAST results are available for this feature:
BLAST of Lcy09g014350 vs.
Match NameE-valueIdentityDescription
BLAST of Lcy09g014350 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A803NUR04.9e-0443.75Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
BLAST of Lcy09g014350 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
BLAST of Lcy09g014350 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy09g014350.1Lcy09g014350.1mRNA