Lcy09g014050 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy09g014050
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	zinc finger CCCH domain-containing protein 1
Location	Chr09: 15733908 .. 15736859 (-)
RNA-Seq Expression	Lcy09g014050
Synteny	Lcy09g014050

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGTGGAAAAGAAAACGAAACAGTTCTCCATGCATTATGGGCCTGTAAGAAGGTAAAAAAGCACTGGGCACGGTGGAGCCCAGTGCAATCTCTCCTAAACACCTATTTTGATGATACTCTTGATCTTTTCTGTAGGTATCAGGAAGATTCTAATTCTGATGAACTGGCAACTTTCGTGGCAATCATATGGTCCATATGGAACTATAGAAATAAAGTTGTTTCCCAGGGCAACCGAATCTTCTTCCATCAGAAATATGACCCTATTGATTGGGCATCAGCTTACATTTCAGAATTTGTGGAGACTCAAGCTAAGCAACATGGAGAACGAGAGCGACCGAGAGAGGCCGGTGATCACCACCAAGATTTGTGGACTCCGCCACCCCACAACCACCTCAAGTTGAACGTGGATGCAGCTTTAACAAATGGAGAAATGGGATCGGGCATGATCATCAGAAACGCAAAGGGTGAATCGATGGCGATTGCAGAACATTACAGAAGAACAAGCTATTCAGTGGATTGGGCAGAAGCTCATGCACTTGTAGAGGGTGTTCGTTTAGCAATGGATTCAGGATTATCTCCAGTTTGGGCAGAAATGGATTCAAAAATTGTGTGGAATCTACTTCACGACCGTGACCATCATCACAATGAGATTGCTCCCCTAATTCACCTGCTCAAGAGACTAGCCATTGAAAAGCACATTAGGGGGTTTCTCTTGACTCCAAGGGACAGAAACAAAGCTGCACACCAGTTAGCTACCCACGCTCGCACAATGAAACACTCTGAAGTTTGGTTAGAAGATTGTCCTCCTTGGGCTCTCAGCATTATAGCTCAAGATATGCCTCATAGGGACGTTCCAACCCTTTCCTTTATTTCTTTGTAATTGTTTTTTTGGTTGTTTAATCTGTTTCTTCTCAAAAAAAAAAAATCTTTTTTTATGTTTAAGTCGGCGCCTTTCCTTTATCTCTCACTCCGCCGGCGACGCTAGGCCCTTCGACCACCTCTCTTCCGAAGCGACGAAACAGATCCCAGCGACGACGTTCTTTCCTTTGGCAGCGAACTCGGACTCGCAACGGGCACCGAGCAGCCGAGCAGATACGGCGGCGGTGGCGTTGATAGACCCTTGAACGACCATCAGTGAACGGGGAGACTCACGGCGGCGCGACCTCTCGATTTGCGACGGTGAGCCTAGATCTGACGCCACTATTCCTAGTCACAACCCAGCCAATGGTACAAAGCCCTCGTTGCCCATTGTGATCATTGGAGAGCTTGAGAGATAAGTTAATTCAACTTGTTCTTTCTTGTTTTCCATTGTAGCATCTATTCTGAATCCGGCTGGTCTTACTCGTATACAATGACAGATACAGGTGAAAATCAGCAGCCTGAACAAGGTATTAGCGATTATTGTTCCATCCAATTTTGTTTTATGTGTATATATAAATTTCCCCGTTTTCATCATGACTTCTTTTTTTATATTTACAATTTTTCTGATAGTAGTCGTTCTCTATACGTTTTTAACCCTTTGATCTTCAGTCTGTAGCTTCTTCAGAAAACCCACGAAGAATAAAAACATCAGAAAACGGACGGTTGATGAAGATGAAGAGGAGGACTCTAAAACTGAGACTTCGTTCCTGGCTAATCAGAAAAAAACTCCCAAGACTAAGAGCAAGATTTATTTCTCTTCTGGACCCTCAAAAAGTTCCTTGTCTAATGAGTCAAATGCGGAGCCTGAAAAACCAATTTTCCAATTTGAGTCTTCAAAAGAAATTCAAGTTCACCATGACAGCAGAGCAACTGCAACTCTGGAAACAGAGACTGAGTTCTCAAGAGATGCACGAGCTATCCGTGAGAGAGTTTTGAAGCAAGCTGAGGAGGCTTTGAAGGGAAAAGGCAAGAGTTCTGGGGGTGAGAAGTTGTATAAAGGGGTCAATGCTTATGTGGATTACAAGGCTGGCTTTAGAAGGGAACACACAATTTCAAGTGAAAAAGCTGGTGGAGCACATGGGCCGCTTAGAGCTTCTGCTCATATAAGAGCTTCAGCAAGATTTGATTATCAGCCTGATATTTGCAAGGATTACAAGGAGACTGGTTACTGTGGTTATGGAGATGCATGCAAGTTTATGCATGACCGAGGGGATTACAAATCTGGGTGGCAGTTGGAAAAGGAATGGGAGGAAGTAGAGAAAGCAAGGAAGAGAAAATTAGCTATGGGTTCTGATGATGGGGATGAGGATGCTGCAGAACAGAGTGATGAAGATGATGAAGATGCCCTTCCCTTCGCTTGTTTTATTTGCCGTGAGCCATTTGTGGACCCTGTTGTGACCAAGTGCAAACATTACTTCTGTGAACACTGTGCGCTAAAGGTAATCGCTCTTTATTGGTCTTAATTATGTTTTAATTTCCTTAGCATTGTATATCTGGTGATCATGAAGTCCTTTCTTCTCTGGGAGGTTGAATTTGCTTCAGAATTCAAGTCTACCGATTATTATCTTTTCTGTATAGAATTTTCCTATTATATATTGCAATTTAAAGGTTTCCTCACAATGCAATTTGAATTTAGTTGAGGAACGTAAATAGAGAACGTTGTGAGGTGGCTGAAGCATTAGGATAATTTTCCTGCAAGTGTGGCAATTGTTTCACTGATGTTGATTTAATGTCTTTGCATGTCTAGAGTTATGACTGCAGAAGCTCTGTATATATTCTTAATTTGTTTCTCTAGAGCACACCTTTAGATAATCATTACATCCTACTTCATGACACATTTCGTTCTTTTCTTTTTTCCTGGTATTTCATGTTCCATATCTTGTCTCGGGAATGAATCTAAAATCTTTTTTTTTATATCAATTTGCAGCACCATGCAAAGAATAAGAAATGCTTCGTTTGCAACCAACCTACGCTTGGAATCTTTAACACGGCTCATGAGATACGGAAAAAGATGGCACAAAGTAAATAA

mRNA sequence

ATGTGTGGAAAAGAAAACGAAACAGTTCTCCATGCATTATGGGCCTGTAAGAAGGTAAAAAAGCACTGGGCACGGTGGAGCCCAGTGCAATCTCTCCTAAACACCTATTTTGATGATACTCTTGATCTTTTCTGTAGGTATCAGGAAGATTCTAATTCTGATGAACTGGCAACTTTCGTGGCAATCATATGGTCCATATGGAACTATAGAAATAAAGTTGTTTCCCAGGGCAACCGAATCTTCTTCCATCAGAAATATGACCCTATTGATTGGGCATCAGCTTACATTTCAGAATTTGTGGAGACTCAAGCTAAGCAACATGGAGAACGAGAGCGACCGAGAGAGGCCGGTGATCACCACCAAGATTTGTGGACTCCGCCACCCCACAACCACCTCAAGTTGAACGTGGATGCAGCTTTAACAAATGGAGAAATGGGATCGGGCATGATCATCAGAAACGCAAAGGGTGAATCGATGGCGATTGCAGAACATTACAGAAGAACAAGCTATTCAGTGGATTGGGCAGAAGCTCATGCACTTGTAGAGGGTGTTCGTTTAGCAATGGATTCAGGATTATCTCCAGTTTGGGCAGAAATGGATTCAAAAATTGTGTGGAATCTACTTCACGACCGTGACCATCATCACAATGAGATTGCTCCCCTAATTCACCTGCTCAAGAGACTAGCCATTGAAAAGCACATTAGGGGGTTTCTCTTGACTCCAAGGGACAGAAACAAAGCTGCACACCAGTTAGCTACCCACGCTCGCACAATGAAACACTCTGAAGTTTGCATCTATTCTGAATCCGGCTGGTCTTACTCGTATACAATGACAGATACAGGTGAAAATCAGCAGCCTGAACAAGTCTGTAGCTTCTTCAGAAAACCCACGAAGAATAAAAACATCAGAAAACGGACGGTTGATGAAGATGAAGAGGAGGACTCTAAAACTGAGACTTCGTTCCTGGCTAATCAGAAAAAAACTCCCAAGACTAAGAGCAAGATTTATTTCTCTTCTGGACCCTCAAAAAGTTCCTTGTCTAATGAGTCAAATGCGGAGCCTGAAAAACCAATTTTCCAATTTGAGTCTTCAAAAGAAATTCAAGTTCACCATGACAGCAGAGCAACTGCAACTCTGGAAACAGAGACTGAGTTCTCAAGAGATGCACGAGCTATCCGTGAGAGAGTTTTGAAGCAAGCTGAGGAGGCTTTGAAGGGAAAAGGCAAGAGTTCTGGGGGTGAGAAGTTGTATAAAGGGGTCAATGCTTATGTGGATTACAAGGCTGGCTTTAGAAGGGAACACACAATTTCAAGTGAAAAAGCTGGTGGAGCACATGGGCCGCTTAGAGCTTCTGCTCATATAAGAGCTTCAGCAAGATTTGATTATCAGCCTGATATTTGCAAGGATTACAAGGAGACTGGTTACTGTGGTTATGGAGATGCATGCAAGTTTATGCATGACCGAGGGGATTACAAATCTGGGTGGCAGTTGGAAAAGGAATGGGAGGAAGTAGAGAAAGCAAGGAAGAGAAAATTAGCTATGGGTTCTGATGATGGGGATGAGGATGCTGCAGAACAGAGTGATGAAGATGATGAAGATGCCCTTCCCTTCGCTTGTTTTATTTGCCGTGAGCCATTTGTGGACCCTGTTGTGACCAAGTGCAAACATTACTTCTGTGAACACTGTGCGCTAAAGCACCATGCAAAGAATAAGAAATGCTTCGTTTGCAACCAACCTACGCTTGGAATCTTTAACACGGCTCATGAGATACGGAAAAAGATGGCACAAAGTAAATAA

Coding sequence (CDS)

ATGTGTGGAAAAGAAAACGAAACAGTTCTCCATGCATTATGGGCCTGTAAGAAGGTAAAAAAGCACTGGGCACGGTGGAGCCCAGTGCAATCTCTCCTAAACACCTATTTTGATGATACTCTTGATCTTTTCTGTAGGTATCAGGAAGATTCTAATTCTGATGAACTGGCAACTTTCGTGGCAATCATATGGTCCATATGGAACTATAGAAATAAAGTTGTTTCCCAGGGCAACCGAATCTTCTTCCATCAGAAATATGACCCTATTGATTGGGCATCAGCTTACATTTCAGAATTTGTGGAGACTCAAGCTAAGCAACATGGAGAACGAGAGCGACCGAGAGAGGCCGGTGATCACCACCAAGATTTGTGGACTCCGCCACCCCACAACCACCTCAAGTTGAACGTGGATGCAGCTTTAACAAATGGAGAAATGGGATCGGGCATGATCATCAGAAACGCAAAGGGTGAATCGATGGCGATTGCAGAACATTACAGAAGAACAAGCTATTCAGTGGATTGGGCAGAAGCTCATGCACTTGTAGAGGGTGTTCGTTTAGCAATGGATTCAGGATTATCTCCAGTTTGGGCAGAAATGGATTCAAAAATTGTGTGGAATCTACTTCACGACCGTGACCATCATCACAATGAGATTGCTCCCCTAATTCACCTGCTCAAGAGACTAGCCATTGAAAAGCACATTAGGGGGTTTCTCTTGACTCCAAGGGACAGAAACAAAGCTGCACACCAGTTAGCTACCCACGCTCGCACAATGAAACACTCTGAAGTTTGCATCTATTCTGAATCCGGCTGGTCTTACTCGTATACAATGACAGATACAGGTGAAAATCAGCAGCCTGAACAAGTCTGTAGCTTCTTCAGAAAACCCACGAAGAATAAAAACATCAGAAAACGGACGGTTGATGAAGATGAAGAGGAGGACTCTAAAACTGAGACTTCGTTCCTGGCTAATCAGAAAAAAACTCCCAAGACTAAGAGCAAGATTTATTTCTCTTCTGGACCCTCAAAAAGTTCCTTGTCTAATGAGTCAAATGCGGAGCCTGAAAAACCAATTTTCCAATTTGAGTCTTCAAAAGAAATTCAAGTTCACCATGACAGCAGAGCAACTGCAACTCTGGAAACAGAGACTGAGTTCTCAAGAGATGCACGAGCTATCCGTGAGAGAGTTTTGAAGCAAGCTGAGGAGGCTTTGAAGGGAAAAGGCAAGAGTTCTGGGGGTGAGAAGTTGTATAAAGGGGTCAATGCTTATGTGGATTACAAGGCTGGCTTTAGAAGGGAACACACAATTTCAAGTGAAAAAGCTGGTGGAGCACATGGGCCGCTTAGAGCTTCTGCTCATATAAGAGCTTCAGCAAGATTTGATTATCAGCCTGATATTTGCAAGGATTACAAGGAGACTGGTTACTGTGGTTATGGAGATGCATGCAAGTTTATGCATGACCGAGGGGATTACAAATCTGGGTGGCAGTTGGAAAAGGAATGGGAGGAAGTAGAGAAAGCAAGGAAGAGAAAATTAGCTATGGGTTCTGATGATGGGGATGAGGATGCTGCAGAACAGAGTGATGAAGATGATGAAGATGCCCTTCCCTTCGCTTGTTTTATTTGCCGTGAGCCATTTGTGGACCCTGTTGTGACCAAGTGCAAACATTACTTCTGTGAACACTGTGCGCTAAAGCACCATGCAAAGAATAAGAAATGCTTCGTTTGCAACCAACCTACGCTTGGAATCTTTAACACGGCTCATGAGATACGGAAAAAGATGGCACAAAGTAAATAA

Protein sequence

MCGKENETVLHALWACKKVKKHWARWSPVQSLLNTYFDDTLDLFCRYQEDSNSDELATFVAIIWSIWNYRNKVVSQGNRIFFHQKYDPIDWASAYISEFVETQAKQHGERERPREAGDHHQDLWTPPPHNHLKLNVDAALTNGEMGSGMIIRNAKGESMAIAEHYRRTSYSVDWAEAHALVEGVRLAMDSGLSPVWAEMDSKIVWNLLHDRDHHHNEIAPLIHLLKRLAIEKHIRGFLLTPRDRNKAAHQLATHARTMKHSEVCIYSESGWSYSYTMTDTGENQQPEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKTETSFLANQKKTPKTKSKIYFSSGPSKSSLSNESNAEPEKPIFQFESSKEIQVHHDSRATATLETETEFSRDARAIRERVLKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRASARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMGSDDGDEDAAEQSDEDDEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVCNQPTLGIFNTAHEIRKKMAQSK

Homology

[Close]

BLAST of Lcy09g014050 vs. ExPASy Swiss-Prot
Match: Q8GX84 (Zinc finger CCCH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=At1g01350 PE=2 SV=2)

HSP 1 Score: 475.7 bits (1223), Expect = 7.7e-133
Identity = 234/318 (73.58%), Postives = 275/318 (86.48%), Query Frame = 0


Query: 282 ENQQPEQVCSFFRKPTKNKNIRKRTVDEDEEE-DSKTETSFLANQKKTPKTKSKIYFSSG 341
           +  Q +QVC+FF+KPTK+KNIRKRT+D DEE+ DSK+E+S L N KK  K  SK+YFSSG
Sbjct: 22  QETQSQQVCTFFKKPTKSKNIRKRTIDADEEDGDSKSESSILQNLKKVAKPDSKLYFSSG 81

Query: 342 PSKSSLSNESNAEPEKPIFQFESSKEIQVHHDSRATATLETETEFSRDARAIRERVLKQA 401
           PSKSS +  ++  PE+ +F ++SSKEIQV +DS ATATLETET+F++DARAIRERVLK+A
Sbjct: 82  PSKSSTT--TSGAPERSVFHYDSSKEIQVQNDSGATATLETETDFNQDARAIRERVLKKA 141

Query: 402 EEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRASARF 461
           +EALKG  K +  EKLYKG++ Y D+KAGFRRE TISSEKAGG+HGPLRASAHIR SARF
Sbjct: 142 DEALKGNKKKASDEKLYKGIHGYTDHKAGFRREQTISSEKAGGSHGPLRASAHIRVSARF 201

Query: 462 DYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMGSDDGD 521
           DYQPDICKDYKETGYCGYGD+CKF+HDRGDYK GWQ+EKEWEE EK RKR  AMG +D D
Sbjct: 202 DYQPDICKDYKETGYCGYGDSCKFLHDRGDYKPGWQIEKEWEEAEKVRKRNKAMGVEDED 261

Query: 522 EDAAEQSDEDDEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVCNQPT 581
           ++A + SDE DE+ALPFACFICREPFVDPVVTKCKHYFCEHCALKHH KNKKCFVCNQPT
Sbjct: 262 DEADKDSDE-DENALPFACFICREPFVDPVVTKCKHYFCEHCALKHHTKNKKCFVCNQPT 321

Query: 582 LGIFNTAHEIRKKMAQSK 599
           +GIFN AHEI+K+MA+ +
Sbjct: 322 MGIFNAAHEIKKRMAEER 336

[Close]

BLAST of Lcy09g014050 vs. ExPASy Swiss-Prot
Match: Q9FNG6 (Zinc finger CCCH domain-containing protein 51 OS=Arabidopsis thaliana OX=3702 GN=At5g06420 PE=2 SV=1)

HSP 1 Score: 473.8 bits (1218), Expect = 2.9e-132
Identity = 231/321 (71.96%), Postives = 272/321 (84.74%), Query Frame = 0


Query: 279 DTGENQQPEQVCSFFRKPTKNKNIRKRTVDEDEEE-DSKTETSFLANQKKTPKTKSKIYF 338
           D   NQ+ +QVC+FF+KPTK+KNIRKRT+D DEE+ DSK+E+S L N KK  K  S +YF
Sbjct: 57  DNSNNQESQQVCTFFKKPTKSKNIRKRTIDADEEDGDSKSESSILQNLKKVAKPDSNLYF 116

Query: 339 SSGPSKSSLSNESNAEPEKPIFQFESSKEIQVHHDSRATATLETETEFSRDARAIRERVL 398
           SSGP     S  ++  PE+P+F ++SSKEIQV +DS ATATLETET+F++DARAIRERVL
Sbjct: 117 SSGP-----STRTSGAPERPVFHYDSSKEIQVQNDSGATATLETETDFNQDARAIRERVL 176

Query: 399 KQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRAS 458
           K+A+ ALKG  K +  EKLYKG++ Y D+KAGFRRE TISSEKAGG+HGPLRASAHIR S
Sbjct: 177 KKADHALKGNKKKASDEKLYKGIHGYTDHKAGFRREQTISSEKAGGSHGPLRASAHIRVS 236

Query: 459 ARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMGSD 518
           ARFDYQPDICKDYKETGYCGYGD+CKF+HDRGDYK GWQ+EKEWEE EK RKR  AMG +
Sbjct: 237 ARFDYQPDICKDYKETGYCGYGDSCKFLHDRGDYKPGWQIEKEWEEAEKVRKRNKAMGVE 296

Query: 519 DGDEDAAEQSDEDDEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVCN 578
           D D++A + SDE DE+ALPFACFICREPF+DPVVTKCKHYFCEHCALKHH KNKKCFVCN
Sbjct: 297 DDDDEADKDSDE-DENALPFACFICREPFLDPVVTKCKHYFCEHCALKHHTKNKKCFVCN 356

Query: 579 QPTLGIFNTAHEIRKKMAQSK 599
           QPT+GIFN AHEI+K+MA+ +
Sbjct: 357 QPTMGIFNAAHEIKKRMAEER 371

[Close]

BLAST of Lcy09g014050 vs. ExPASy Swiss-Prot
Match: Q6K4V3 (Zinc finger CCCH domain-containing protein 15 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0301000 PE=2 SV=1)

HSP 1 Score: 429.5 bits (1103), Expect = 6.3e-119
Identity = 222/321 (69.16%), Postives = 253/321 (78.82%), Query Frame = 0


Query: 289 VCSFFRKPTKNKNIRKRTV-----DEDEEEDSKTETSFLANQKKTPKTKSKIYFSSGPSK 348
           VCSF RKP   KNIRKR       D+D+E+ S    +  A  KK P + SK++FSS    
Sbjct: 18  VCSFVRKPP--KNIRKRPTAPAGSDDDDEDGSGAIAA--ARAKKAPSSTSKLFFSSA--- 77

Query: 349 SSLSNESNAEPEKPIFQFESSKEIQVHHDSRATATLETETEFSRDARAIRERVLKQAEEA 408
                + ++EP +  FQ+ESS+ IQ   DSRATATLETETEF RDARAIRER LKQAEE+
Sbjct: 78  -----DGSSEPRR--FQYESSRTIQASTDSRATATLETETEFDRDARAIRERQLKQAEES 137

Query: 409 LK------GKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRAS 468
           LK           SG  ++YKG++ Y DYKAGFRREHT+SSEKAGG+HGPLRASAHIR S
Sbjct: 138 LKKNPSAPASSSGSGSGEVYKGIHGYTDYKAGFRREHTVSSEKAGGSHGPLRASAHIRLS 197

Query: 469 ARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMGSD 528
           ARFDYQPDICKDYKETGYCGYGD+CKFMHDRGDYKSGWQ+EKEWEE EKARKR++AMG D
Sbjct: 198 ARFDYQPDICKDYKETGYCGYGDSCKFMHDRGDYKSGWQIEKEWEEAEKARKRRIAMGGD 257

Query: 529 DGDEDAAEQSDEDDEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVCN 588
             D +A E+ D+DDE+ALPFAC+ICREPFVDPVVTKCKHYFCEHCALKHH+KNKKCFVCN
Sbjct: 258 GSDYEAGEEDDDDDEEALPFACYICREPFVDPVVTKCKHYFCEHCALKHHSKNKKCFVCN 317

Query: 589 QPTLGIFNTAHEIRKKMAQSK 599
           +PTLGIFN A EIRKKMAQ K
Sbjct: 318 KPTLGIFNAAQEIRKKMAQDK 324

[Close]

BLAST of Lcy09g014050 vs. ExPASy Swiss-Prot
Match: Q67ER4 (E3 ubiquitin-protein ligase RNF113A OS=Bos taurus OX=9913 GN=RNF113A PE=2 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 5.3e-49
Identity = 129/331 (38.97%), Postives = 189/331 (57.10%), Query Frame = 0


Query: 287 EQVCSF-FRKPTKN--KNIRKRTVDEDEEEDSKTETSFLANQKKTPKTKSKIY------- 346
           +QVC+F F+KP +      RKR +   E  DS + +S   N    P+ K  ++       
Sbjct: 12  DQVCTFLFKKPGRKVAAGRRKRPICNQESGDS-SSSSDEGNTVVRPEKKRAVHNPMIQKT 71

Query: 347 FSSGPSKSSLSNESNAEPEK-------PIFQFESSKEIQVHHDSRATATLETETEFSRDA 406
             SG  K +  + S+ E E+        +++   S +     D  ATA  E +TE  RDA
Sbjct: 72  RGSGKQKVAYGDLSSEEEEENKSESLGVVYKSTRSAKPVGPEDMGATAVYELDTEKERDA 131

Query: 407 RAIRERVLKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGG--AHGP 466
           +AI ER  K  EE L+G+      +K+Y+G+N   +Y+   + + T     + G    GP
Sbjct: 132 QAIFERSQKIQEE-LRGQ----EDDKIYRGIN---NYQKFMKPKDTSMGNASSGMVRKGP 191

Query: 467 LRASAHIRASARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKA 526
           +RA  H+RA+ R+DYQPDICKDYKETG+CG+GD+CKF+HDR DYK GWQ+E+E +E    
Sbjct: 192 IRAPEHLRATVRWDYQPDICKDYKETGFCGFGDSCKFLHDRSDYKHGWQIERELDE---- 251

Query: 527 RKRKLAMGSDDGDEDAAEQSDEDDEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHH 586
              +  +  D+  E  +      DE+ +PF CFICR+ F +PVVTKC+HYFCE CAL+H 
Sbjct: 252 --GRYGVYEDENYEVGS------DEEEIPFKCFICRQTFQNPVVTKCRHYFCESCALQHF 311

Query: 587 AKNKKCFVCNQPTLGIFNTAHEIRKKMAQSK 599
               +C+VC+Q T G+FN A E+  K+ + +
Sbjct: 312 RTTPRCYVCDQQTNGVFNPAKELIAKLEKHR 321

[Close]

BLAST of Lcy09g014050 vs. ExPASy Swiss-Prot
Match: O15541 (E3 ubiquitin-protein ligase RNF113A OS=Homo sapiens OX=9606 GN=RNF113A PE=1 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 1.2e-48
Identity = 130/330 (39.39%), Postives = 182/330 (55.15%), Query Frame = 0


Query: 287 EQVCSF-FRKPTKN--KNIRKRTVDEDEEEDS-----------KTETSFLANQKKTPKTK 346
           +QVC+F F+KP +      RKR   + E  +S           + E   + +     KT+
Sbjct: 12  DQVCTFLFKKPGRKGAAGRRKRPACDPEPGESGSSSDEGCTVVRPEKKRVTHNPMIQKTR 71

Query: 347 SKIYFSSGPSKSSLSNESNAEPEKPIFQFESSKEIQV--HHDSRATATLETETEFSRDAR 406
                 +     S   E   EPE     ++S++  +     D  ATA  E +TE  RDA+
Sbjct: 72  DSGKQKAAYGDLSSEEEEENEPESLGVVYKSTRSAKPVGPEDMGATAVYELDTEKERDAQ 131

Query: 407 AIRERVLKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGG--AHGPL 466
           AI ER  K  EE L+GK      +K+Y+G+N Y  Y    + + T     + G    GP+
Sbjct: 132 AIFERSQKIQEE-LRGK----EDDKIYRGINNYQKY---MKPKDTSMGNASSGMVRKGPI 191

Query: 467 RASAHIRASARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKAR 526
           RA  H+RA+ R+DYQPDICKDYKETG+CG+GD+CKF+HDR DYK GWQ+E+E +E     
Sbjct: 192 RAPEHLRATVRWDYQPDICKDYKETGFCGFGDSCKFLHDRSDYKHGWQIERELDE----- 251

Query: 527 KRKLAMGSDDGDEDAAEQSDEDDEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHA 586
                 G     ED   +   DDE+ +PF CFICR+ F +PVVTKC+HYFCE CAL+H  
Sbjct: 252 ------GRYGVYEDENYEVGSDDEE-IPFKCFICRQSFQNPVVTKCRHYFCESCALQHFR 311

Query: 587 KNKKCFVCNQPTLGIFNTAHEIRKKMAQSK 599
              +C+VC+Q T G+FN A E+  K+ + +
Sbjct: 312 TTPRCYVCDQQTNGVFNPAKELIAKLEKHR 321

[Close]

BLAST of Lcy09g014050 vs. ExPASy TrEMBL
Match: A0A6J1H4B5 (zinc finger CCCH domain-containing protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111459918 PE=4 SV=1)

HSP 1 Score: 611.7 bits (1576), Expect = 3.3e-171
Identity = 303/322 (94.10%), Postives = 312/322 (96.89%), Query Frame = 0


Query: 277 MTDTGENQQPEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKTETSFLANQKKTPKTKSKIY 336
           MTDTGENQQPEQVCSFF+KPTKNKNIRKRTVDEDEEE   TETS L NQKK PKT SK+Y
Sbjct: 1   MTDTGENQQPEQVCSFFKKPTKNKNIRKRTVDEDEEESKSTETSVLQNQKKAPKTDSKLY 60

Query: 337 FSSGPSKSSLSNESNAEPEKPIFQFESSKEIQVHHDSRATATLETETEFSRDARAIRERV 396
           FSSGPSKS+L+NESN E +KPIFQFESSKEIQVHHDSRATATLETET+FSRDARAIRERV
Sbjct: 61  FSSGPSKSNLTNESNVESDKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120

Query: 397 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 456
           LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA
Sbjct: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180

Query: 457 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMGS 516
           SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAM S
Sbjct: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS 240

Query: 517 DDGDEDAAEQSDEDDEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC 576
           DDGDEDAAEQSDED+EDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC
Sbjct: 241 DDGDEDAAEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC 300

Query: 577 NQPTLGIFNTAHEIRKKMAQSK 599
           NQPTLGIFNTAHEI+KKMA+SK
Sbjct: 301 NQPTLGIFNTAHEIKKKMAESK 322

[Close]

BLAST of Lcy09g014050 vs. ExPASy TrEMBL
Match: A0A0A0KFS0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G382870 PE=4 SV=1)

HSP 1 Score: 610.9 bits (1574), Expect = 5.6e-171
Identity = 303/322 (94.10%), Postives = 311/322 (96.58%), Query Frame = 0


Query: 277 MTDTGENQQPEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKTETSFLANQKKTPKTKSKIY 336
           MTDTG+ Q  EQVCSFFRKPTKNKNIRKRTVDEDEEEDSK ETSFL NQKK PKT+SK+Y
Sbjct: 1   MTDTGDTQPSEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKAETSFLLNQKKAPKTESKLY 60

Query: 337 FSSGPSKSSLSNESNAEPEKPIFQFESSKEIQVHHDSRATATLETETEFSRDARAIRERV 396
           FSSGPSK+S SNESN EP KPIFQFESSKEIQVHHDSRATATLETET+FSRDARAIRERV
Sbjct: 61  FSSGPSKNSSSNESNVEPNKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120

Query: 397 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 456
           LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA
Sbjct: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180

Query: 457 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMGS 516
           SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAM S
Sbjct: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS 240

Query: 517 DDGDEDAAEQSDEDDEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC 576
           DDGDED +EQSDED+EDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC
Sbjct: 241 DDGDEDTSEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC 300

Query: 577 NQPTLGIFNTAHEIRKKMAQSK 599
           NQPTLGIFNTAHEIRK+MAQSK
Sbjct: 301 NQPTLGIFNTAHEIRKRMAQSK 322

[Close]

BLAST of Lcy09g014050 vs. ExPASy TrEMBL
Match: A0A1S3CS03 (zinc finger CCCH domain-containing protein 1 OS=Cucumis melo OX=3656 GN=LOC103504086 PE=4 SV=1)

HSP 1 Score: 609.4 bits (1570), Expect = 1.6e-170
Identity = 303/322 (94.10%), Postives = 311/322 (96.58%), Query Frame = 0


Query: 277 MTDTGENQQPEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKTETSFLANQKKTPKTKSKIY 336
           MTDTG+ Q  EQVCSFFRKPTKNKNIRKRTVDEDEEEDSK ETSFL NQKK PKT+SK+Y
Sbjct: 1   MTDTGDTQPSEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKAETSFLLNQKKAPKTESKLY 60

Query: 337 FSSGPSKSSLSNESNAEPEKPIFQFESSKEIQVHHDSRATATLETETEFSRDARAIRERV 396
           FSSGPSK+SLSNESN EP KPIFQFESSKEIQVHHDSRATATLETET+FSRDARAIRERV
Sbjct: 61  FSSGPSKNSLSNESNVEPNKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120

Query: 397 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 456
           LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA
Sbjct: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180

Query: 457 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMGS 516
           SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAM S
Sbjct: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS 240

Query: 517 DDGDEDAAEQSDEDDEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC 576
           DDGDED++EQSDED+E ALPFACFICREPFVDPVVTKC HYFCEHCALKHHAKNKKCFVC
Sbjct: 241 DDGDEDSSEQSDEDEEGALPFACFICREPFVDPVVTKCGHYFCEHCALKHHAKNKKCFVC 300

Query: 577 NQPTLGIFNTAHEIRKKMAQSK 599
           NQPTLGIFNTAHEIRKKMAQSK
Sbjct: 301 NQPTLGIFNTAHEIRKKMAQSK 322

[Close]

BLAST of Lcy09g014050 vs. ExPASy TrEMBL
Match: A0A6J1BYC6 (zinc finger CCCH domain-containing protein 1 OS=Momordica charantia OX=3673 GN=LOC111006576 PE=4 SV=1)

HSP 1 Score: 606.3 bits (1562), Expect = 1.4e-169
Identity = 303/323 (93.81%), Postives = 313/323 (96.90%), Query Frame = 0


Query: 277 MTDTGENQQPEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKTETSFLANQKKTPKTKSKIY 336
           MTDTGENQQPEQVCSFF+KPTKNKNIRKRT+DEDEEEDSKTETS L NQKK  KT+SK+Y
Sbjct: 1   MTDTGENQQPEQVCSFFKKPTKNKNIRKRTIDEDEEEDSKTETSLLLNQKKALKTESKLY 60

Query: 337 FSSGPSKSSLSNESNAEPEKPIFQFESSKEIQVHHDSRATATLETETEFSRDARAIRERV 396
           FSSGPSKSSLSNESN E +KPIFQFESSKEIQVHHDS+ATATLETETEFSRDARAIRERV
Sbjct: 61  FSSGPSKSSLSNESNVESDKPIFQFESSKEIQVHHDSKATATLETETEFSRDARAIRERV 120

Query: 397 LKQAEEALKGKGKSSGGE-KLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIR 456
           LKQA+EALKGKGKSSG E KLYKGVNAYVDYKAGFRRE TISSEKAGGAHGPLRASAHIR
Sbjct: 121 LKQADEALKGKGKSSGDEKKLYKGVNAYVDYKAGFRREQTISSEKAGGAHGPLRASAHIR 180

Query: 457 ASARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMG 516
           ASARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMG
Sbjct: 181 ASARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMG 240

Query: 517 SDDGDEDAAEQSDEDDEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFV 576
           SD+GDED AEQSDED+EDALPFACFICREPFVDPV+TKCKHYFCEHCALKHHAKNKKCFV
Sbjct: 241 SDEGDEDTAEQSDEDEEDALPFACFICREPFVDPVMTKCKHYFCEHCALKHHAKNKKCFV 300

Query: 577 CNQPTLGIFNTAHEIRKKMAQSK 599
           CNQPTLGIFNTAHEIRKKMAQSK
Sbjct: 301 CNQPTLGIFNTAHEIRKKMAQSK 323

[Close]

BLAST of Lcy09g014050 vs. ExPASy TrEMBL
Match: A0A6J1I9H7 (zinc finger CCCH domain-containing protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111470453 PE=4 SV=1)

HSP 1 Score: 605.9 bits (1561), Expect = 1.8e-169
Identity = 300/322 (93.17%), Postives = 310/322 (96.27%), Query Frame = 0


Query: 277 MTDTGENQQPEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKTETSFLANQKKTPKTKSKIY 336
           MTDTGENQQPEQVCSFF+KPTKNKNIRKRTVDEDEE+   TETS L NQKK PKT SK+Y
Sbjct: 1   MTDTGENQQPEQVCSFFKKPTKNKNIRKRTVDEDEEDSKSTETSVLQNQKKAPKTDSKLY 60

Query: 337 FSSGPSKSSLSNESNAEPEKPIFQFESSKEIQVHHDSRATATLETETEFSRDARAIRERV 396
           FSSGPSKS+L+NESN E +KPIFQFESSKEIQVHHDSRATATLETET+FSRDARAIRERV
Sbjct: 61  FSSGPSKSNLTNESNVESDKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120

Query: 397 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 456
           LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA
Sbjct: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180

Query: 457 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMGS 516
           SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAM S
Sbjct: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMRS 240

Query: 517 DDGDEDAAEQSDEDDEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC 576
           DDGDED AEQSDED+EDALPFACFICREPFVDPVVTKCKHYFCEHCALK HAKNKKCFVC
Sbjct: 241 DDGDEDVAEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKRHAKNKKCFVC 300

Query: 577 NQPTLGIFNTAHEIRKKMAQSK 599
           NQPTLGIFNTAHEI+KKMA+SK
Sbjct: 301 NQPTLGIFNTAHEIKKKMAESK 322

[Close]

BLAST of Lcy09g014050 vs. NCBI nr
Match: XP_022958735.1 (zinc finger CCCH domain-containing protein 1 [Cucurbita moschata])

HSP 1 Score: 611.7 bits (1576), Expect = 6.8e-171
Identity = 303/322 (94.10%), Postives = 312/322 (96.89%), Query Frame = 0


Query: 277 MTDTGENQQPEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKTETSFLANQKKTPKTKSKIY 336
           MTDTGENQQPEQVCSFF+KPTKNKNIRKRTVDEDEEE   TETS L NQKK PKT SK+Y
Sbjct: 1   MTDTGENQQPEQVCSFFKKPTKNKNIRKRTVDEDEEESKSTETSVLQNQKKAPKTDSKLY 60

Query: 337 FSSGPSKSSLSNESNAEPEKPIFQFESSKEIQVHHDSRATATLETETEFSRDARAIRERV 396
           FSSGPSKS+L+NESN E +KPIFQFESSKEIQVHHDSRATATLETET+FSRDARAIRERV
Sbjct: 61  FSSGPSKSNLTNESNVESDKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120

Query: 397 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 456
           LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA
Sbjct: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180

Query: 457 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMGS 516
           SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAM S
Sbjct: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS 240

Query: 517 DDGDEDAAEQSDEDDEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC 576
           DDGDEDAAEQSDED+EDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC
Sbjct: 241 DDGDEDAAEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC 300

Query: 577 NQPTLGIFNTAHEIRKKMAQSK 599
           NQPTLGIFNTAHEI+KKMA+SK
Sbjct: 301 NQPTLGIFNTAHEIKKKMAESK 322

[Close]

BLAST of Lcy09g014050 vs. NCBI nr
Match: XP_004149426.1 (zinc finger CCCH domain-containing protein 1 [Cucumis sativus] >KGN47699.1 hypothetical protein Csa_018272 [Cucumis sativus])

HSP 1 Score: 610.9 bits (1574), Expect = 1.2e-170
Identity = 303/322 (94.10%), Postives = 311/322 (96.58%), Query Frame = 0


Query: 277 MTDTGENQQPEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKTETSFLANQKKTPKTKSKIY 336
           MTDTG+ Q  EQVCSFFRKPTKNKNIRKRTVDEDEEEDSK ETSFL NQKK PKT+SK+Y
Sbjct: 1   MTDTGDTQPSEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKAETSFLLNQKKAPKTESKLY 60

Query: 337 FSSGPSKSSLSNESNAEPEKPIFQFESSKEIQVHHDSRATATLETETEFSRDARAIRERV 396
           FSSGPSK+S SNESN EP KPIFQFESSKEIQVHHDSRATATLETET+FSRDARAIRERV
Sbjct: 61  FSSGPSKNSSSNESNVEPNKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120

Query: 397 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 456
           LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA
Sbjct: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180

Query: 457 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMGS 516
           SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAM S
Sbjct: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS 240

Query: 517 DDGDEDAAEQSDEDDEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC 576
           DDGDED +EQSDED+EDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC
Sbjct: 241 DDGDEDTSEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC 300

Query: 577 NQPTLGIFNTAHEIRKKMAQSK 599
           NQPTLGIFNTAHEIRK+MAQSK
Sbjct: 301 NQPTLGIFNTAHEIRKRMAQSK 322

[Close]

BLAST of Lcy09g014050 vs. NCBI nr
Match: XP_008466746.1 (PREDICTED: zinc finger CCCH domain-containing protein 1 [Cucumis melo] >XP_008466747.1 PREDICTED: zinc finger CCCH domain-containing protein 1 [Cucumis melo])

HSP 1 Score: 609.4 bits (1570), Expect = 3.4e-170
Identity = 303/322 (94.10%), Postives = 311/322 (96.58%), Query Frame = 0


Query: 277 MTDTGENQQPEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKTETSFLANQKKTPKTKSKIY 336
           MTDTG+ Q  EQVCSFFRKPTKNKNIRKRTVDEDEEEDSK ETSFL NQKK PKT+SK+Y
Sbjct: 1   MTDTGDTQPSEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKAETSFLLNQKKAPKTESKLY 60

Query: 337 FSSGPSKSSLSNESNAEPEKPIFQFESSKEIQVHHDSRATATLETETEFSRDARAIRERV 396
           FSSGPSK+SLSNESN EP KPIFQFESSKEIQVHHDSRATATLETET+FSRDARAIRERV
Sbjct: 61  FSSGPSKNSLSNESNVEPNKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120

Query: 397 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 456
           LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA
Sbjct: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180

Query: 457 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMGS 516
           SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAM S
Sbjct: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS 240

Query: 517 DDGDEDAAEQSDEDDEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC 576
           DDGDED++EQSDED+E ALPFACFICREPFVDPVVTKC HYFCEHCALKHHAKNKKCFVC
Sbjct: 241 DDGDEDSSEQSDEDEEGALPFACFICREPFVDPVVTKCGHYFCEHCALKHHAKNKKCFVC 300

Query: 577 NQPTLGIFNTAHEIRKKMAQSK 599
           NQPTLGIFNTAHEIRKKMAQSK
Sbjct: 301 NQPTLGIFNTAHEIRKKMAQSK 322

[Close]

BLAST of Lcy09g014050 vs. NCBI nr
Match: XP_023548600.1 (zinc finger CCCH domain-containing protein 1 [Cucurbita pepo subsp. pepo] >XP_023548608.1 zinc finger CCCH domain-containing protein 1 [Cucurbita pepo subsp. pepo] >XP_023548618.1 zinc finger CCCH domain-containing protein 1 [Cucurbita pepo subsp. pepo] >KAG7032517.1 Zinc finger CCCH domain-containing protein 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 609.0 bits (1569), Expect = 4.4e-170
Identity = 301/322 (93.48%), Postives = 312/322 (96.89%), Query Frame = 0


Query: 277 MTDTGENQQPEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKTETSFLANQKKTPKTKSKIY 336
           MTDTGENQQPEQVCSFF+KPTKNKNIRKRTVDEDEE+   +ETS L NQKK PKT SK+Y
Sbjct: 1   MTDTGENQQPEQVCSFFKKPTKNKNIRKRTVDEDEEDSKSSETSVLQNQKKAPKTDSKLY 60

Query: 337 FSSGPSKSSLSNESNAEPEKPIFQFESSKEIQVHHDSRATATLETETEFSRDARAIRERV 396
           FSSGPSKS+L+NESN E +KPIFQFESSKEIQVHHDSRATATLETET+FSRDARAIRERV
Sbjct: 61  FSSGPSKSNLTNESNVESDKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120

Query: 397 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 456
           LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA
Sbjct: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180

Query: 457 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMGS 516
           SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAM S
Sbjct: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS 240

Query: 517 DDGDEDAAEQSDEDDEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC 576
           DDGDEDAAEQSDED+EDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC
Sbjct: 241 DDGDEDAAEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC 300

Query: 577 NQPTLGIFNTAHEIRKKMAQSK 599
           NQPTLGIFNTAHEI+KKMA+SK
Sbjct: 301 NQPTLGIFNTAHEIKKKMAESK 322

[Close]

BLAST of Lcy09g014050 vs. NCBI nr
Match: KAG6601808.1 (Zinc finger CCCH domain-containing protein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 607.4 bits (1565), Expect = 1.3e-169
Identity = 300/321 (93.46%), Postives = 311/321 (96.88%), Query Frame = 0


Query: 277 MTDTGENQQPEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKTETSFLANQKKTPKTKSKIY 336
           MTDTGENQQPEQVCSFF+KPTKNKNIRKRTVDEDEE+   +ETS L NQKK PKT SK+Y
Sbjct: 1   MTDTGENQQPEQVCSFFKKPTKNKNIRKRTVDEDEEDSKSSETSVLQNQKKAPKTDSKLY 60

Query: 337 FSSGPSKSSLSNESNAEPEKPIFQFESSKEIQVHHDSRATATLETETEFSRDARAIRERV 396
           FSSGPSKS+L+NESN E +KPIFQFESSKEIQVHHDSRATATLETET+FSRDARAIRERV
Sbjct: 61  FSSGPSKSNLTNESNVESDKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120

Query: 397 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 456
           LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA
Sbjct: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180

Query: 457 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMGS 516
           SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAM S
Sbjct: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS 240

Query: 517 DDGDEDAAEQSDEDDEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC 576
           DDGDEDAAEQSDED+EDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC
Sbjct: 241 DDGDEDAAEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC 300

Query: 577 NQPTLGIFNTAHEIRKKMAQS 598
           NQPTLGIFNTAHEI+KKMA+S
Sbjct: 301 NQPTLGIFNTAHEIKKKMAES 321

[Close]

BLAST of Lcy09g014050 vs. TAIR 10
Match: AT1G01350.1 (Zinc finger (CCCH-type/C3HC4-type RING finger) family protein )

HSP 1 Score: 475.7 bits (1223), Expect = 5.4e-134
Identity = 234/318 (73.58%), Postives = 275/318 (86.48%), Query Frame = 0


Query: 282 ENQQPEQVCSFFRKPTKNKNIRKRTVDEDEEE-DSKTETSFLANQKKTPKTKSKIYFSSG 341
           +  Q +QVC+FF+KPTK+KNIRKRT+D DEE+ DSK+E+S L N KK  K  SK+YFSSG
Sbjct: 22  QETQSQQVCTFFKKPTKSKNIRKRTIDADEEDGDSKSESSILQNLKKVAKPDSKLYFSSG 81

Query: 342 PSKSSLSNESNAEPEKPIFQFESSKEIQVHHDSRATATLETETEFSRDARAIRERVLKQA 401
           PSKSS +  ++  PE+ +F ++SSKEIQV +DS ATATLETET+F++DARAIRERVLK+A
Sbjct: 82  PSKSSTT--TSGAPERSVFHYDSSKEIQVQNDSGATATLETETDFNQDARAIRERVLKKA 141

Query: 402 EEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRASARF 461
           +EALKG  K +  EKLYKG++ Y D+KAGFRRE TISSEKAGG+HGPLRASAHIR SARF
Sbjct: 142 DEALKGNKKKASDEKLYKGIHGYTDHKAGFRREQTISSEKAGGSHGPLRASAHIRVSARF 201

Query: 462 DYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMGSDDGD 521
           DYQPDICKDYKETGYCGYGD+CKF+HDRGDYK GWQ+EKEWEE EK RKR  AMG +D D
Sbjct: 202 DYQPDICKDYKETGYCGYGDSCKFLHDRGDYKPGWQIEKEWEEAEKVRKRNKAMGVEDED 261

Query: 522 EDAAEQSDEDDEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVCNQPT 581
           ++A + SDE DE+ALPFACFICREPFVDPVVTKCKHYFCEHCALKHH KNKKCFVCNQPT
Sbjct: 262 DEADKDSDE-DENALPFACFICREPFVDPVVTKCKHYFCEHCALKHHTKNKKCFVCNQPT 321

Query: 582 LGIFNTAHEIRKKMAQSK 599
           +GIFN AHEI+K+MA+ +
Sbjct: 322 MGIFNAAHEIKKRMAEER 336

[Close]

BLAST of Lcy09g014050 vs. TAIR 10
Match: AT5G06420.1 (Zinc finger (CCCH-type/C3HC4-type RING finger) family protein )

HSP 1 Score: 473.8 bits (1218), Expect = 2.1e-133
Identity = 231/321 (71.96%), Postives = 272/321 (84.74%), Query Frame = 0


Query: 279 DTGENQQPEQVCSFFRKPTKNKNIRKRTVDEDEEE-DSKTETSFLANQKKTPKTKSKIYF 338
           D   NQ+ +QVC+FF+KPTK+KNIRKRT+D DEE+ DSK+E+S L N KK  K  S +YF
Sbjct: 57  DNSNNQESQQVCTFFKKPTKSKNIRKRTIDADEEDGDSKSESSILQNLKKVAKPDSNLYF 116

Query: 339 SSGPSKSSLSNESNAEPEKPIFQFESSKEIQVHHDSRATATLETETEFSRDARAIRERVL 398
           SSGP     S  ++  PE+P+F ++SSKEIQV +DS ATATLETET+F++DARAIRERVL
Sbjct: 117 SSGP-----STRTSGAPERPVFHYDSSKEIQVQNDSGATATLETETDFNQDARAIRERVL 176

Query: 399 KQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRAS 458
           K+A+ ALKG  K +  EKLYKG++ Y D+KAGFRRE TISSEKAGG+HGPLRASAHIR S
Sbjct: 177 KKADHALKGNKKKASDEKLYKGIHGYTDHKAGFRREQTISSEKAGGSHGPLRASAHIRVS 236

Query: 459 ARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMGSD 518
           ARFDYQPDICKDYKETGYCGYGD+CKF+HDRGDYK GWQ+EKEWEE EK RKR  AMG +
Sbjct: 237 ARFDYQPDICKDYKETGYCGYGDSCKFLHDRGDYKPGWQIEKEWEEAEKVRKRNKAMGVE 296

Query: 519 DGDEDAAEQSDEDDEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVCN 578
           D D++A + SDE DE+ALPFACFICREPF+DPVVTKCKHYFCEHCALKHH KNKKCFVCN
Sbjct: 297 DDDDEADKDSDE-DENALPFACFICREPFLDPVVTKCKHYFCEHCALKHHTKNKKCFVCN 356

Query: 579 QPTLGIFNTAHEIRKKMAQSK 599
           QPT+GIFN AHEI+K+MA+ +
Sbjct: 357 QPTMGIFNAAHEIKKRMAEER 371

[Close]

BLAST of Lcy09g014050 vs. TAIR 10
Match: AT5G06420.2 (Zinc finger (CCCH-type/C3HC4-type RING finger) family protein )

HSP 1 Score: 473.8 bits (1218), Expect = 2.1e-133
Identity = 231/321 (71.96%), Postives = 272/321 (84.74%), Query Frame = 0


Query: 279 DTGENQQPEQVCSFFRKPTKNKNIRKRTVDEDEEE-DSKTETSFLANQKKTPKTKSKIYF 338
           D   NQ+ +QVC+FF+KPTK+KNIRKRT+D DEE+ DSK+E+S L N KK  K  S +YF
Sbjct: 57  DNSNNQESQQVCTFFKKPTKSKNIRKRTIDADEEDGDSKSESSILQNLKKVAKPDSNLYF 116

Query: 339 SSGPSKSSLSNESNAEPEKPIFQFESSKEIQVHHDSRATATLETETEFSRDARAIRERVL 398
           SSGP     S  ++  PE+P+F ++SSKEIQV +DS ATATLETET+F++DARAIRERVL
Sbjct: 117 SSGP-----STRTSGAPERPVFHYDSSKEIQVQNDSGATATLETETDFNQDARAIRERVL 176

Query: 399 KQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRAS 458
           K+A+ ALKG  K +  EKLYKG++ Y D+KAGFRRE TISSEKAGG+HGPLRASAHIR S
Sbjct: 177 KKADHALKGNKKKASDEKLYKGIHGYTDHKAGFRREQTISSEKAGGSHGPLRASAHIRVS 236

Query: 459 ARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMGSD 518
           ARFDYQPDICKDYKETGYCGYGD+CKF+HDRGDYK GWQ+EKEWEE EK RKR  AMG +
Sbjct: 237 ARFDYQPDICKDYKETGYCGYGDSCKFLHDRGDYKPGWQIEKEWEEAEKVRKRNKAMGVE 296

Query: 519 DGDEDAAEQSDEDDEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVCN 578
           D D++A + SDE DE+ALPFACFICREPF+DPVVTKCKHYFCEHCALKHH KNKKCFVCN
Sbjct: 297 DDDDEADKDSDE-DENALPFACFICREPFLDPVVTKCKHYFCEHCALKHHTKNKKCFVCN 356

Query: 579 QPTLGIFNTAHEIRKKMAQSK 599
           QPT+GIFN AHEI+K+MA+ +
Sbjct: 357 QPTMGIFNAAHEIKKRMAEER 371

[Close]

BLAST of Lcy09g014050 vs. TAIR 10
Match: AT4G01023.1 (RING/U-box superfamily protein )

HSP 1 Score: 108.6 bits (270), Expect = 1.7e-23
Identity = 52/114 (45.61%), Postives = 74/114 (64.91%), Query Frame = 0


Query: 485 MHDRGDYKSGWQLEKEWEEVEKARKRKLAMGSDDGDEDAAEQSDEDDEDALPFACFICRE 544
           + D        +LEK  ++++K   RKL        E     + E+D+DALP AC IC+ 
Sbjct: 40  VEDEDSNNESSRLEKLEKKIKKETARKL--------ETDFVLTGEEDDDALPLACSICQN 99

Query: 545 PFVDPVVTKCKHYFCEHCALKHHAKNKKCFVCNQPTLGIFNTAHEIRKKMAQSK 599
           PF+DPVVT C HYFC+ CALKHH +N  CFVCN+PTLG+F+TA EI++++ + +
Sbjct: 100 PFLDPVVTNCNHYFCDKCALKHHTENDTCFVCNEPTLGLFDTAVEIKERIEEER 145

The following BLAST results are available for this feature:

BLAST of Lcy09g014050 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GX84	7.7e-133	73.58	Zinc finger CCCH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q9FNG6	2.9e-132	71.96	Zinc finger CCCH domain-containing protein 51 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q6K4V3	6.3e-119	69.16	Zinc finger CCCH domain-containing protein 15 OS=Oryza sativa subsp. japonica OX...	[more]
Q67ER4	5.3e-49	38.97	E3 ubiquitin-protein ligase RNF113A OS=Bos taurus OX=9913 GN=RNF113A PE=2 SV=1	[more]
O15541	1.2e-48	39.39	E3 ubiquitin-protein ligase RNF113A OS=Homo sapiens OX=9606 GN=RNF113A PE=1 SV=1	[more]

BLAST of Lcy09g014050 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H4B5	3.3e-171	94.10	zinc finger CCCH domain-containing protein 1 OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A0A0KFS0	5.6e-171	94.10	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G382870 PE=4 SV=1	[more]
A0A1S3CS03	1.6e-170	94.10	zinc finger CCCH domain-containing protein 1 OS=Cucumis melo OX=3656 GN=LOC10350...	[more]
A0A6J1BYC6	1.4e-169	93.81	zinc finger CCCH domain-containing protein 1 OS=Momordica charantia OX=3673 GN=L...	[more]
A0A6J1I9H7	1.8e-169	93.17	zinc finger CCCH domain-containing protein 1 OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]

BLAST of Lcy09g014050 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022958735.1	6.8e-171	94.10	zinc finger CCCH domain-containing protein 1 [Cucurbita moschata]	[more]
XP_004149426.1	1.2e-170	94.10	zinc finger CCCH domain-containing protein 1 [Cucumis sativus] >KGN47699.1 hypot...	[more]
XP_008466746.1	3.4e-170	94.10	PREDICTED: zinc finger CCCH domain-containing protein 1 [Cucumis melo] >XP_00846...	[more]
XP_023548600.1	4.4e-170	93.48	zinc finger CCCH domain-containing protein 1 [Cucurbita pepo subsp. pepo] >XP_02...	[more]
KAG6601808.1	1.3e-169	93.46	Zinc finger CCCH domain-containing protein 1, partial [Cucurbita argyrosperma su...	[more]

BLAST of Lcy09g014050 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G01350.1	5.4e-134	73.58	Zinc finger (CCCH-type/C3HC4-type RING finger) family protein	[more]
AT5G06420.1	2.1e-133	71.96	Zinc finger (CCCH-type/C3HC4-type RING finger) family protein	[more]
AT5G06420.2	2.1e-133	71.96	Zinc finger (CCCH-type/C3HC4-type RING finger) family protein	[more]
AT4G01023.1	1.7e-23	45.61	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000571	Zinc finger, CCCH-type	SMART	SM00356	c3hfinal6	coord: 461..488 e-value: 1.8E-7 score: 40.8
IPR000571	Zinc finger, CCCH-type	PFAM	PF00642	zf-CCCH	coord: 462..487 e-value: 1.3E-9 score: 37.7
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 461..489 score: 14.577143
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 539..576 e-value: 8.2E-5 score: 32.0
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 539..577 score: 10.571388
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 133..267 e-value: 2.0E-10 score: 42.6
None	No IPR available	PFAM	PF13920	zf-C3HC4_3	coord: 538..580 e-value: 1.3E-8 score: 34.6
None	No IPR available	GENE3D	4.10.1000.10		coord: 459..493 e-value: 4.0E-6 score: 28.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 303..382
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 106..126
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 510..529
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 365..382
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 321..354
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 106..129
None	No IPR available	PANTHER	PTHR12930:SF9	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 1-LIKE	coord: 277..598
None	No IPR available	CDD	cd16539	RING-HC_RNF113A_B	coord: 537..577 e-value: 2.46865E-26 score: 99.2271
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 538..582
IPR002156	Ribonuclease H domain	PFAM	PF13456	RVT_3	coord: 136..255 e-value: 1.4E-17 score: 63.6
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 537..596 e-value: 2.1E-15 score: 58.1
IPR039971	Pre-mRNA-splicing factor CWC24-like	PANTHER	PTHR12930	ZINC FINGER PROTEIN 183	coord: 277..598
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 554..563
IPR044730	Ribonuclease H-like domain, plant type	CDD	cd06222	RNase_H_like	coord: 134..252 e-value: 3.70763E-18 score: 78.51
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 460..492
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 131..259

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy09g014050.1	Lcy09g014050.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034247	snoRNA splicing
cellular_component	GO:0000932	P-body
cellular_component	GO:0005684	U2-type spliceosomal complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity
molecular_function	GO:0003676	nucleic acid binding