Lcy09g013980 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy09g013980
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	cysteine-type peptidases;cysteine-type peptidases
Location	Chr09: 15678813 .. 15679052 (-)
RNA-Seq Expression	Lcy09g013980
Synteny	Lcy09g013980

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCATTCGACCTCGGGGGAAACCATTGGGTTATGGTATGTGCTGATCTCGTAGTGGACAAGTTGACCGTCCTCGATTCATTCATAGCACTGACATCCGATGCGACCTTGAAGAAAGAGTTGAGCACTTTAGCCACAATACTGCTAGTGCTACTACTCAAGTGCGATGTCATGAAGGCAAAACCACATCTCCCAGTTCACGAATGGGAAATACATAAAGATAGGTCAGTGCCTCAATAG

mRNA sequence

ATGCCATTCGACCTCGGGGGAAACCATTGGGTTATGGTATGTGCTGATCTCGTAGTGGACAAGTTGACCGTCCTCGATTCATTCATAGCACTGACATCCGATGCGACCTTGAAGAAAGAGTTGAGCACTTTAGCCACAATACTGCTAGTGCTACTACTCAAGTGCGATGTCATGAAGGCAAAACCACATCTCCCAGTTCACGAATGGGAAATACATAAAGATAGGTCAGTGCCTCAATAG

Coding sequence (CDS)

ATGCCATTCGACCTCGGGGGAAACCATTGGGTTATGGTATGTGCTGATCTCGTAGTGGACAAGTTGACCGTCCTCGATTCATTCATAGCACTGACATCCGATGCGACCTTGAAGAAAGAGTTGAGCACTTTAGCCACAATACTGCTAGTGCTACTACTCAAGTGCGATGTCATGAAGGCAAAACCACATCTCCCAGTTCACGAATGGGAAATACATAAAGATAGGTCAGTGCCTCAATAG

Protein sequence

MPFDLGGNHWVMVCADLVVDKLTVLDSFIALTSDATLKKELSTLATILLVLLLKCDVMKAKPHLPVHEWEIHKDRSVPQ

Homology

[Close]

BLAST of Lcy09g013980 vs. ExPASy TrEMBL
Match: A0A6J1DQZ3 (uncharacterized protein LOC111023442 OS=Momordica charantia OX=3673 GN=LOC111023442 PE=3 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 6.2e-09
Identity = 32/79 (40.51%), Postives = 52/79 (65.82%), Query Frame = 0


Query: 1   MPFDLGGNHWVMVCADLVVDKLTVLDSFIALTSDATLKKELSTLATILLVLLLKCDVMKA 60
           +PF++ GNHWVM+C D V  ++ V DS  A+TS A+L+++L  + T++  LL K  V+  
Sbjct: 23  LPFNVNGNHWVMICIDFVEGEIVVWDSLRAITSYASLEEQLKVMHTVIPSLLHKSQVIAV 82

Query: 61  KPHLPVHEWEIHKDRSVPQ 80
           +P+LP+  W I +  S P+
Sbjct: 83  RPNLPMTPWRIRRVTSTPE 101

[Close]

BLAST of Lcy09g013980 vs. ExPASy TrEMBL
Match: A0A6J1CJT2 (uncharacterized protein LOC111012067 OS=Momordica charantia OX=3673 GN=LOC111012067 PE=3 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.4e-08
Identity = 32/79 (40.51%), Postives = 51/79 (64.56%), Query Frame = 0


Query: 1   MPFDLGGNHWVMVCADLVVDKLTVLDSFIALTSDATLKKELSTLATILLVLLLKCDVMKA 60
           +PF++ GN+WVM+C D V  ++ V DS  A+T DA+L+++L  + T++  LL K  V+  
Sbjct: 23  LPFNVNGNYWVMICIDFVEGEIVVWDSLRAITLDASLEEQLEVMRTVIPSLLHKSQVIAV 82

Query: 61  KPHLPVHEWEIHKDRSVPQ 80
            P+LP+  W I +  S PQ
Sbjct: 83  HPNLPMIPWRIRRVTSAPQ 101

[Close]

BLAST of Lcy09g013980 vs. ExPASy TrEMBL
Match: A0A6J1DPE8 (uncharacterized protein LOC111022296 OS=Momordica charantia OX=3673 GN=LOC111022296 PE=3 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.8e-08
Identity = 30/79 (37.97%), Postives = 51/79 (64.56%), Query Frame = 0


Query: 1   MPFDLGGNHWVMVCADLVVDKLTVLDSFIALTSDATLKKELSTLATILLVLLLKCDVMKA 60
           +PF++  NHWVM+C D V  ++ V DS +A+T DA+L+++L+ +  ++  LL K   +  
Sbjct: 33  LPFNVNDNHWVMICIDFVEGEIVVWDSLMAITPDASLEEQLNVMRAVIPPLLHKSQAITV 92

Query: 61  KPHLPVHEWEIHKDRSVPQ 80
           +P+LP+  W I +  S PQ
Sbjct: 93  RPNLPMTPWRISRVTSTPQ 111

[Close]

BLAST of Lcy09g013980 vs. ExPASy TrEMBL
Match: A0A6J1D3R7 (uncharacterized protein LOC111016993 OS=Momordica charantia OX=3673 GN=LOC111016993 PE=3 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 4.0e-08
Identity = 30/66 (45.45%), Postives = 46/66 (69.70%), Query Frame = 0


Query: 1   MPFDLGGNHWVMVCADLVVDKLTVLDSFIALTSDATLKKELSTLATILLVLLLKCDVMKA 60
           +PF++ G HWVMVC DL   ++ V DS  ++T+D  ++  L  + TI+ V+L KCDVMK 
Sbjct: 227 IPFNIRGKHWVMVCIDLEEGEIVVWDSLNSMTTDHAMEDHLKVMHTIIPVMLFKCDVMKV 286

Query: 61  KPHLPV 67
           +P+LP+
Sbjct: 287 QPNLPI 292

[Close]

BLAST of Lcy09g013980 vs. ExPASy TrEMBL
Match: A0A6J1DLV0 (uncharacterized protein LOC111021646 OS=Momordica charantia OX=3673 GN=LOC111021646 PE=3 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 4.9e-06
Identity = 28/79 (35.44%), Postives = 48/79 (60.76%), Query Frame = 0


Query: 1   MPFDLGGNHWVMVCADLVVDKLTVLDSFIALTSDATLKKELSTLATILLVLLLKCDVMKA 60
           +P+++GG HW+++C D    +L V DSF+ +T    L++EL  + TI+  L+ +  V   
Sbjct: 85  LPYNIGGVHWIVICIDFDEGELIVWDSFMNMTPLPQLEQELKPMITIIPTLICRVGVHLY 144

Query: 61  KPHLPVHEWEIHKDRSVPQ 80
           KP++P+  W I +  S PQ
Sbjct: 145 KPNIPLTPWRIRRVSSAPQ 163

[Close]

BLAST of Lcy09g013980 vs. NCBI nr
Match: XP_022156568.1 (uncharacterized protein LOC111023442 [Momordica charantia])

HSP 1 Score: 69.7 bits (169), Expect = 1.3e-08
Identity = 32/79 (40.51%), Postives = 52/79 (65.82%), Query Frame = 0


Query: 1   MPFDLGGNHWVMVCADLVVDKLTVLDSFIALTSDATLKKELSTLATILLVLLLKCDVMKA 60
           +PF++ GNHWVM+C D V  ++ V DS  A+TS A+L+++L  + T++  LL K  V+  
Sbjct: 23  LPFNVNGNHWVMICIDFVEGEIVVWDSLRAITSYASLEEQLKVMHTVIPSLLHKSQVIAV 82

Query: 61  KPHLPVHEWEIHKDRSVPQ 80
           +P+LP+  W I +  S P+
Sbjct: 83  RPNLPMTPWRIRRVTSTPE 101

[Close]

BLAST of Lcy09g013980 vs. NCBI nr
Match: XP_022141784.1 (uncharacterized protein LOC111012067 [Momordica charantia])

HSP 1 Score: 68.6 bits (166), Expect = 2.8e-08
Identity = 32/79 (40.51%), Postives = 51/79 (64.56%), Query Frame = 0


Query: 1   MPFDLGGNHWVMVCADLVVDKLTVLDSFIALTSDATLKKELSTLATILLVLLLKCDVMKA 60
           +PF++ GN+WVM+C D V  ++ V DS  A+T DA+L+++L  + T++  LL K  V+  
Sbjct: 23  LPFNVNGNYWVMICIDFVEGEIVVWDSLRAITLDASLEEQLEVMRTVIPSLLHKSQVIAV 82

Query: 61  KPHLPVHEWEIHKDRSVPQ 80
            P+LP+  W I +  S PQ
Sbjct: 83  HPNLPMIPWRIRRVTSAPQ 101

[Close]

BLAST of Lcy09g013980 vs. NCBI nr
Match: XP_022155154.1 (uncharacterized protein LOC111022296 [Momordica charantia])

HSP 1 Score: 68.2 bits (165), Expect = 3.7e-08
Identity = 30/79 (37.97%), Postives = 51/79 (64.56%), Query Frame = 0


Query: 1   MPFDLGGNHWVMVCADLVVDKLTVLDSFIALTSDATLKKELSTLATILLVLLLKCDVMKA 60
           +PF++  NHWVM+C D V  ++ V DS +A+T DA+L+++L+ +  ++  LL K   +  
Sbjct: 33  LPFNVNDNHWVMICIDFVEGEIVVWDSLMAITPDASLEEQLNVMRAVIPPLLHKSQAITV 92

Query: 61  KPHLPVHEWEIHKDRSVPQ 80
           +P+LP+  W I +  S PQ
Sbjct: 93  RPNLPMTPWRISRVTSTPQ 111

[Close]

BLAST of Lcy09g013980 vs. NCBI nr
Match: XP_022148308.1 (uncharacterized protein LOC111016993 [Momordica charantia])

HSP 1 Score: 67.0 bits (162), Expect = 8.3e-08
Identity = 30/66 (45.45%), Postives = 46/66 (69.70%), Query Frame = 0


Query: 1   MPFDLGGNHWVMVCADLVVDKLTVLDSFIALTSDATLKKELSTLATILLVLLLKCDVMKA 60
           +PF++ G HWVMVC DL   ++ V DS  ++T+D  ++  L  + TI+ V+L KCDVMK 
Sbjct: 227 IPFNIRGKHWVMVCIDLEEGEIVVWDSLNSMTTDHAMEDHLKVMHTIIPVMLFKCDVMKV 286

Query: 61  KPHLPV 67
           +P+LP+
Sbjct: 287 QPNLPI 292

[Close]

BLAST of Lcy09g013980 vs. NCBI nr
Match: XP_022154364.1 (uncharacterized protein LOC111021646 [Momordica charantia])

HSP 1 Score: 60.1 bits (144), Expect = 1.0e-05
Identity = 28/79 (35.44%), Postives = 48/79 (60.76%), Query Frame = 0


Query: 1   MPFDLGGNHWVMVCADLVVDKLTVLDSFIALTSDATLKKELSTLATILLVLLLKCDVMKA 60
           +P+++GG HW+++C D    +L V DSF+ +T    L++EL  + TI+  L+ +  V   
Sbjct: 85  LPYNIGGVHWIVICIDFDEGELIVWDSFMNMTPLPQLEQELKPMITIIPTLICRVGVHLY 144

Query: 61  KPHLPVHEWEIHKDRSVPQ 80
           KP++P+  W I +  S PQ
Sbjct: 145 KPNIPLTPWRIRRVSSAPQ 163

[Close]

BLAST of Lcy09g013980 vs. TAIR 10
Match: AT2G07240.1 (cysteine-type peptidases;cysteine-type peptidases )

HSP 1 Score: 47.8 bits (112), Expect = 4.8e-06
Identity = 24/48 (50.00%), Postives = 29/48 (60.42%), Query Frame = 0


Query: 1   MPFDLGGNHWVMVCADLVVDKLTVLDSFIALTSDATLKKELSTLATIL 49
           MPF+    HWV +C DL   K+T+LDS I L  DA L  EL  LA +L
Sbjct: 746 MPFNFDKKHWVSLCVDLKAHKITILDSNIQLRRDAALYAELQPLAAML 793

The following BLAST results are available for this feature:

BLAST of Lcy09g013980 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy09g013980 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DQZ3	6.2e-09	40.51	uncharacterized protein LOC111023442 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A6J1CJT2	1.4e-08	40.51	uncharacterized protein LOC111012067 OS=Momordica charantia OX=3673 GN=LOC111012...	[more]
A0A6J1DPE8	1.8e-08	37.97	uncharacterized protein LOC111022296 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A6J1D3R7	4.0e-08	45.45	uncharacterized protein LOC111016993 OS=Momordica charantia OX=3673 GN=LOC111016...	[more]
A0A6J1DLV0	4.9e-06	35.44	uncharacterized protein LOC111021646 OS=Momordica charantia OX=3673 GN=LOC111021...	[more]

BLAST of Lcy09g013980 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022156568.1	1.3e-08	40.51	uncharacterized protein LOC111023442 [Momordica charantia]	[more]
XP_022141784.1	2.8e-08	40.51	uncharacterized protein LOC111012067 [Momordica charantia]	[more]
XP_022155154.1	3.7e-08	37.97	uncharacterized protein LOC111022296 [Momordica charantia]	[more]
XP_022148308.1	8.3e-08	45.45	uncharacterized protein LOC111016993 [Momordica charantia]	[more]
XP_022154364.1	1.0e-05	35.44	uncharacterized protein LOC111021646 [Momordica charantia]	[more]

BLAST of Lcy09g013980 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G07240.1	4.8e-06	50.00	cysteine-type peptidases;cysteine-type peptidases	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003653	Ulp1 protease family, C-terminal catalytic domain	PFAM	PF02902	Peptidase_C48	coord: 1..79 e-value: 1.5E-5 score: 25.0

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy09g013980.1	Lcy09g013980.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
molecular_function	GO:0008234	cysteine-type peptidase activity