Lcy09g013450 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy09g013450
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	rRNA-processing protein UTP23 homolog
Location	Chr09: 15004544 .. 15009439 (+)
RNA-Seq Expression	Lcy09g013450
Synteny	Lcy09g013450

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACTCGGCCAACTTCTAAACCTAACTGCTCCAAGCCTCTTCTTCTTCTTCACGCCGTTTCCTCCTCCGTTTCAGCAGCTCAGTGTCGCTGCCGCTTCTCTTCCGTTCACTGCTGCCGCTGCCGTCGTGTTTCTTCCGCTCGTGCCGCCGCCACCGTCGTGTTTCTTCCGTTCGTGCCGCCGCAGATTTTCTACTCCCTTGTTGTTACTGGTATTCTCACCATCTCTATCAATGCCTTTCTGCTCACTTGATAAACACAAATTAGAACTTGTCTAATGAAAGAACAGAGAGTTTTTTTATTCTTTTTTTTAAAAATAACAATAACCGATTAGTAACAAAACGAAAAAACGGAACAGAAACGGGAGAAATGTTCTCGAGGGCGCAATTGGTACATATAGGATGGAAAGATGGTTTTGAGATACTGCATTATTGGCAGAGAGAAAAGTAATTGGATGGAAATAAAACCAAACCTGATTGTAAGTACTGTATTTGTTTGTGTATTGTCTGTCTTTCCATCAGACAACTCAAACTAGACTAGGACTTAGTTTTATGGAGTTGCTTTGATTGACTAAGCAATCTCCACATATCAATAATGGTAGATTATAATAGATGTTGATGAGTTATTGGATTAAAATTTTTGGTAGGGAGCCAATGAGCCATGTTAGGGTTGAATATAGTTCTTACAATCTTATTAAAAAATCATAGGCTCATATTGCTGAATGCTGACTTATGCCATTCAAACTTCAATAGTACATGAATTTAATAGGCAATGGAAATAGGCATGAAACGATTCTTTGCACTTACTATTTTGATCTTATTTTGCATTCTTTGTTGTCTTTTTTTTTTTTTTTGAAAAGCATTCTTTGTTATCTTAGTTATCTGCTTTATTTGTTGATTTTTGATAGATGAGATTCAAAAAGCAAAAGCGTCACCGGAAAGCTGTTAGATTTTACACTGCCTGTTTTGGATTCAGACAACCATTTAAAGTCTTCTGTGATGGAACTTTTGTCCACCATCTTCTCTCCCATCAGATACTGCCAGCCAATGATGCCATTGCTAAAATTCTTGGTGCCCCGGTCAAGCTTTTCGCTACTAGGTCTGTTCCTTTTATTGAGTCAAATCACATAATGGTTACTCCTATGACTTATTAGTTTTCATTATCTCATCACTTTGCAGATGTGTAATCTCAGAGTTGAAGGCTCTTGGCCAATCTTACTCTGAAGCTTTTGATGCAGCTAATTCGCTATTTACTGCAAGGTGAGCCACAAACATATTTCCATCATTGAATTTGAATGGTTTCTATTCATGATGACTGTTTCTGATTTTGTCATGTACTTGTGGTATTAGCATTTGTTGATATGAGGCACTGTAATTATTTGCTTGTTCAATTCTGTCTTTTCTGAGTTGAAATTACATCAATGTTAGATGCGACCATGAAAGGAGAAAGAGTGCCGAGGCATGCATCATTGATGTGATTGGTGAATCAAATGCTGAGCATTTTTTTGTTGCCACTCAAGATTCTCATCTTAGGAAGAAGCTTCAAGAGGTTAGTGTATTTTATGTATTGGTACCCAAAAATATTAATTTTCTATTACACCTATACTCCTTTCGTTTGCTTAAAATCTGATTATTTCACAATTGCAGCTTATGATCTTTTTTCAACCTTCTAGTTTATTAGTCGTTTCTAATTTCTGCTTTCTTTTCATATGCTAGGTTCGTTCTGCTTTTATAAAATATGCACTTAATTAGAAGTTCTCTTGGAAGTCTAATCATGTATTACTGGATCAGTATTTTTGTTATTGTTGGGCATTATTTTTATTATGTTTAGATTGAATTCTCCATGCCAGCTTGTATGGATGGATTTGTGAAGGATTGAGAAAGTTTCAACTTGCTGCCATGTCTACTTGTAATTCTTTTATGTATATGTTAGCAGATACCTGGGGTCCCACTCATATTTTGTTTGAGAAATGCACTTTTCATGGAGCAACCGTCTGCTGTGGAACGCCAGTTCGTTAAATCTGCAGAAGAAAAAAGACTGCATATGTCTGAGGGGGAACGCAATCTATTAAAGAAAAAAATGAAGTACGAAGTGGAAACAGAGAAAACTAACGAAGATGGAGATCTGGGGGATCAAAATTTAGAGACACAAGTTTTGGAAAAGAAAAAGACAAGAGTTCCAGATAATCTGAAGGATAGACCTCAATTTAAGAGAAAGAGAGCAAAGGTATTTTTCCATGACATTTTCTCTCTTTAGACTTGATTTTGTGCTTCAATTTGCATTATTGATTAATTAACTTCTTTAGTAACTTATGATTTTTATGTTTCGGTCATACTTCGAGCTTTCTATTTTGAAATACCATGGAATGAAGAGTTTGTAGTTCTTATATTAATTTTTAGGGGTGTGTTGACGAGCAAATTTTTGTTTGACTATGATTGTATTTTATGAGGTGTCGTCTGGCTGGTGTCAAATTGTTGAATTGCATGTATATAATAATATAGCTTTAACTAGATTCTTGGGTAAGTGTAATATCTGATTATTTGATATGAAACATATTAAGCCTCCAAATAAGTTTTGATCGATCAAAGTATACATTGTATTGAAAGACAACTCTAATATAATAACATGAACAAAACTTTTTTGAGTCTGGAATTTGAAAAGAAAAGTTTGAATCCTTTGGGGCTTTGCTGTCAGGGCGTTTCTTTCAGTTTGTTGGCTTGAAAGGAACAAAAGACTTTTTGAAGATAAGTTTACTGATCTTCATTCTTTTTGTGGGAATCTTCACCTTATTTTGCCCCTTGGTGGGTTCATAGTTATAAGTTATAACCAATTGCGTTGATAATACAACATTTGGATTTTATTTATTTATTTATTTATTTATTTTTATTATTTATTTTTATTTTTTTTAAATTTGTAATTGGGTCCTTTGGGTAGTATTTCTCTCTTTTCCTGCTCCTAAATTGTATTTCCTCTTATCTTGCCTAGTAAATTTATGTTTCTTATAAAAAAGGAGAAAAAAACTTTTCTTAGTCTTAATTCATTCCAACACTTGTAGGCGATGAGAAAAAAAGTTTAATGATACAAAACCAAGTTTTTTTTTTCATTACGTTAATGAAAACTGATGTTTTTCTTCCTTACATGCACATTTTTCGTTTACTCCTCCCTGTTTGCAATTGCATGCTTGGCCTTGGATTTTATAGAGTCTTGAGTAGAGTTGCCAGATATGAAATTGGACTGGTTTCGTGTAAAATTCCTTTCAGCTATTTTAATTGCAATGTTCAATCTGAATCATCTAAATAGTGGTGTTACTTTGAAAAATGTGCAATGAGGCACTGCTGTTTATAATTCATGGTGCCATTCAGTTGCTGCTTGTAGTTATTATATAATTATATCACTCACAATTTAAAAGGCTAAAAGCGGCTTGAGGCGGTATGAGGCGTAAGCCTCAATTTGAATTAAAAACATTATGCAAATCCTAAATATGTATGAACAGGTAATGTAATGCTAGACAGAATAAAAGTATAAAAAAAAGTCACCCTCTTGAATTGCTCCTTGAACAAAATTCCTACAAGTATATCTTTACTATTAGTACTATTATCACTTATAGGATTGACTTATTCTATAAATTTTTTTTTTCAAAGGTTTTAAAGCCTAAGTTACAACTCAAACCTTTATATTTTTAAAGAATGGGGAAACCTTTATATGAGGTGTAGAGACTTTAAGCCTCAATGCCTTTTTATAAAGGTGTAAGCCTCTTATGCTCCAAAGAAGACGCAAGTCTTGAGGCTAAAAGTCAGAGCTTTACCTCCTCAAGGCGTAAGCTTCCATAGCCTTTTAAAACATTGATCACTCAGACCAATTTTCTTCTTGATTTATGCATGTACTTTCATTTTCTAATCTCTCCACCAAACTCTGCAGGGTCCAAACCCTCTTTCGTGTTTGAAGAAGAAGAAAAAGCCCAATCCAAGCCAACATCCAGTTTCAGCTAAGGTAATTTTACAACTTCTATAATGTTCAGTGCCTTGGAATGCCTAATAGTCTATTCTAGAATAAGGTTGAAAGTTTGGAGACCAAAATGGGAGTTTAGTCTGAAATGTTTTTGAAAATTCATGTCTCAATCCGAGGAAATCTTAGTATAGCCATTATTCATTGTTATTGAGTTTATTAGTAGCTGTTTTTTCTAGTATTGTGTCTCTAAAAAAAAGGAATAAGTGAGGGAGACCAGGGATTCAACTTTTTTGACTTCTCCATGGTTCATCAGAAGTCTGAAATATTTCAATAATTTTCTGAGGTTGGTAATTTTGAAGGTGGCATCTTAGGTTTAGCATGCAAAAAAACTCTTGAAGATAAAGTTCCTTTTCCATCATGATATATAGTCATGAGAATGCAACTTTTGTTATTTTTTTTAATTACATCTTGCACCCAAAACACAGTATAATTATCTTATTATTTCTATGGAGTCTATTTCATTGTTTGTATTAAATACATATTTGTGTTATTGTGGCTGTGATTGAATTGCCCTTATAACGCAGAAGGATGATGATAATGCTACTGAAAAAAGGACTCGAAAACGAAAGCGGTCACGAAAGGCCAAAACGCCAACAGAGACGACGAGCACACAATAGTTGGGTCCTCAACTGATTTGGCTTCGGAAATTTTGCTGCTTTGACATAAATGACATAATTATTTTGTTTTAATTCATGGCAACCTTAGCTAGAGAATTAGTAGTTGGTTTGTTGTAATTAGGTACTTTTGAAATTTTAAGGACATATTAGACACTTTTTAAAGTTTAGGAGCCTATTCGACACAAAATTGAGAGATCAGGGACCTGTTGGATACTTTTGAAAGTTTAGGTACTAAATTTGTAATTTGAACATTTGAATATTCTGTATAAAAACA

mRNA sequence

CACTCGGCCAACTTCTAAACCTAACTGCTCCAAGCCTCTTCTTCTTCTTCACGCCGTTTCCTCCTCCGTTTCAGCAGCTCAGTGTCGCTGCCGCTTCTCTTCCGTTCACTGCTGCCGCTGCCGTCGTGTTTCTTCCGCTCGTGCCGCCGCCACCGTCGTGTTTCTTCCGTTCGTGCCGCCGCAGATTTTCTACTCCCTTGTTGTTACTGATGAGATTCAAAAAGCAAAAGCGTCACCGGAAAGCTGTTAGATTTTACACTGCCTGTTTTGGATTCAGACAACCATTTAAAGTCTTCTGTGATGGAACTTTTGTCCACCATCTTCTCTCCCATCAGATACTGCCAGCCAATGATGCCATTGCTAAAATTCTTGGTGCCCCGGTCAAGCTTTTCGCTACTAGATGTGTAATCTCAGAGTTGAAGGCTCTTGGCCAATCTTACTCTGAAGCTTTTGATGCAGCTAATTCGCTATTTACTGCAAGATGCGACCATGAAAGGAGAAAGAGTGCCGAGGCATGCATCATTGATGTGATTGGTGAATCAAATGCTGAGCATTTTTTTGTTGCCACTCAAGATTCTCATCTTAGGAAGAAGCTTCAAGAGATACCTGGGGTCCCACTCATATTTTGTTTGAGAAATGCACTTTTCATGGAGCAACCGTCTGCTGTGGAACGCCAGTTCGTTAAATCTGCAGAAGAAAAAAGACTGCATATGTCTGAGGGGGAACGCAATCTATTAAAGAAAAAAATGAAGTACGAAGTGGAAACAGAGAAAACTAACGAAGATGGAGATCTGGGGGATCAAAATTTAGAGACACAAGTTTTGGAAAAGAAAAAGACAAGAGTTCCAGATAATCTGAAGGATAGACCTCAATTTAAGAGAAAGAGAGCAAAGGGTCCAAACCCTCTTTCGTGTTTGAAGAAGAAGAAAAAGCCCAATCCAAGCCAACATCCAGTTTCAGCTAAGAAGGATGATGATAATGCTACTGAAAAAAGGACTCGAAAACGAAAGCGGTCACGAAAGGCCAAAACGCCAACAGAGACGACGAGCACACAATAGTTGGGTCCTCAACTGATTTGGCTTCGGAAATTTTGCTGCTTTGACATAAATGACATAATTATTTTGTTTTAATTCATGGCAACCTTAGCTAGAGAATTAGTAGTTGGTTTGTTGTAATTAGGTACTTTTGAAATTTTAAGGACATATTAGACACTTTTTAAAGTTTAGGAGCCTATTCGACACAAAATTGAGAGATCAGGGACCTGTTGGATACTTTTGAAAGTTTAGGTACTAAATTTGTAATTTGAACATTTGAATATTCTGTATAAAAACA

Coding sequence (CDS)

ATGAGATTCAAAAAGCAAAAGCGTCACCGGAAAGCTGTTAGATTTTACACTGCCTGTTTTGGATTCAGACAACCATTTAAAGTCTTCTGTGATGGAACTTTTGTCCACCATCTTCTCTCCCATCAGATACTGCCAGCCAATGATGCCATTGCTAAAATTCTTGGTGCCCCGGTCAAGCTTTTCGCTACTAGATGTGTAATCTCAGAGTTGAAGGCTCTTGGCCAATCTTACTCTGAAGCTTTTGATGCAGCTAATTCGCTATTTACTGCAAGATGCGACCATGAAAGGAGAAAGAGTGCCGAGGCATGCATCATTGATGTGATTGGTGAATCAAATGCTGAGCATTTTTTTGTTGCCACTCAAGATTCTCATCTTAGGAAGAAGCTTCAAGAGATACCTGGGGTCCCACTCATATTTTGTTTGAGAAATGCACTTTTCATGGAGCAACCGTCTGCTGTGGAACGCCAGTTCGTTAAATCTGCAGAAGAAAAAAGACTGCATATGTCTGAGGGGGAACGCAATCTATTAAAGAAAAAAATGAAGTACGAAGTGGAAACAGAGAAAACTAACGAAGATGGAGATCTGGGGGATCAAAATTTAGAGACACAAGTTTTGGAAAAGAAAAAGACAAGAGTTCCAGATAATCTGAAGGATAGACCTCAATTTAAGAGAAAGAGAGCAAAGGGTCCAAACCCTCTTTCGTGTTTGAAGAAGAAGAAAAAGCCCAATCCAAGCCAACATCCAGTTTCAGCTAAGAAGGATGATGATAATGCTACTGAAAAAAGGACTCGAAAACGAAAGCGGTCACGAAAGGCCAAAACGCCAACAGAGACGACGAGCACACAATAG

Protein sequence

MRFKKQKRHRKAVRFYTACFGFRQPFKVFCDGTFVHHLLSHQILPANDAIAKILGAPVKLFATRCVISELKALGQSYSEAFDAANSLFTARCDHERRKSAEACIIDVIGESNAEHFFVATQDSHLRKKLQEIPGVPLIFCLRNALFMEQPSAVERQFVKSAEEKRLHMSEGERNLLKKKMKYEVETEKTNEDGDLGDQNLETQVLEKKKTRVPDNLKDRPQFKRKRAKGPNPLSCLKKKKKPNPSQHPVSAKKDDDNATEKRTRKRKRSRKAKTPTETTSTQ

Homology

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BLAST of Lcy09g013450 vs. ExPASy Swiss-Prot
Match: Q9CX11 (rRNA-processing protein UTP23 homolog OS=Mus musculus OX=10090 GN=Utp23 PE=2 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.1e-25
Identity = 90/275 (32.73%), Postives = 136/275 (49.45%), Query Frame = 0


Query: 1   MRFKKQKRHRKAVRFYTACFGFRQPFKVFCDGTFVHHLLSHQILPANDAIAKILGAPVKL 60
           M+  +QK  +K + F+   FG R+P+++  DGTF    L  +I    D + + L    +L
Sbjct: 1   MKITRQKHAKKHLGFFRNNFGVREPYQILLDGTFCQAALRGRI-QLRDQLPRYLMGETQL 60

Query: 61  FATRCVISELKALGQSYSEAFDAANSLFTARCDHERRK-SAEACIIDVIGESNAEHFFVA 120
             TRCV+ EL+ LG+    A   A       C H +   S   C++ ++ E N  H+FVA
Sbjct: 61  CTTRCVLKELETLGKELYGAKLIAQKCQVRNCPHFKSPVSGSECLLSMVDEGNPHHYFVA 120

Query: 121 TQDSHLRKKLQEIPGVPLIFCLRNALFMEQPSAVERQFVKSAEEKRLHMSEGERNLLKKK 180
           TQD +L  K++  PG+PL+F ++N + +++PS     FVK+ E  +L +S  E+  +K+ 
Sbjct: 121 TQDQNLSVKVKRTPGIPLMFIIQNTIVLDKPSPRTVAFVKAVEAGQL-VSVHEKQSIKQL 180

Query: 181 MKYEVETEKTNEDGDLGDQNLETQVLEKKKTRVPDNLKDRPQFKRKRAKGPNPLSCLKKK 240
            +                        E+   R PD  + R   K+K+  GPNPLSCLKKK
Sbjct: 181 KE------------------------EQGLVRNPDLRRRRR--KKKKVGGPNPLSCLKKK 237

Query: 241 KKPNPSQHPVSAKKDDDNATEKRTRKRKRSRKAKT 275
           KK   ++ P S KK          RKRKR R   T
Sbjct: 241 KKAQDTKSPASEKK----------RKRKRIRNRST 237

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BLAST of Lcy09g013450 vs. ExPASy Swiss-Prot
Match: Q9BRU9 (rRNA-processing protein UTP23 homolog OS=Homo sapiens OX=9606 GN=UTP23 PE=1 SV=2)

HSP 1 Score: 114.8 bits (286), Expect = 1.6e-24
Identity = 89/283 (31.45%), Postives = 136/283 (48.06%), Query Frame = 0


Query: 1   MRFKKQKRHRKAVRFYTACFGFRQPFKVFCDGTFVHHLLSHQILPANDAIAKILGAPVKL 60
           M+  +QK  +K + F+   FG R+P+++  DGTF    L  +I    + + + L    +L
Sbjct: 1   MKITRQKHAKKHLGFFRNNFGVREPYQILLDGTFCQAALRGRI-QLREQLPRYLMGETQL 60

Query: 61  FATRCVISELKALGQSYSEAFDAANSLFTARCDH-ERRKSAEACIIDVIGESNAEHFFVA 120
             TRCV+ EL+ LG+    A   A       C H +   S   C++ ++ E N  H+FVA
Sbjct: 61  CTTRCVLKELETLGKDLYGAKLIAQKCQVRNCPHFKNAVSGSECLLSMVEEGNPHHYFVA 120

Query: 121 TQDSHLRKKLQEIPGVPLIFCLRNALFMEQPSAVERQFVKSAEEKRLHMSEGERNLLKKK 180
           TQD +L  K+++ PGVPL+F ++N + +++PS     FVK+ E  +L +S  E+  +K  
Sbjct: 121 TQDQNLSVKVKKKPGVPLMFIIQNTMVLDKPSPKTIAFVKAVESGQL-VSVHEKESIKHL 180

Query: 181 MKYEVETEKTNEDGDLGDQNLETQVLEKKKTRVPDNLKDRPQFKRKRAKGPNPLSCLKKK 240
                                      K++  +  N +   + KRK+  GPNPLSCLKKK
Sbjct: 181 ---------------------------KEEQGLVKNTEQSRRKKRKKISGPNPLSCLKKK 240

Query: 241 KKPNPSQHPVSAKKDDDNATEKRTRKRKRSRKAKTPTETTSTQ 283
           KK   +Q   S KK          RKRKR R    P   +  Q
Sbjct: 241 KKAPDTQSSASEKK----------RKRKRIRNRSNPKVLSEKQ 244

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BLAST of Lcy09g013450 vs. ExPASy Swiss-Prot
Match: Q08DU1 (rRNA-processing protein UTP23 homolog OS=Bos taurus OX=9913 GN=UTP23 PE=2 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 3.6e-24
Identity = 84/275 (30.55%), Postives = 141/275 (51.27%), Query Frame = 0


Query: 1   MRFKKQKRHRKAVRFYTACFGFRQPFKVFCDGTFVHHLLSHQILPANDAIAKILGAPVKL 60
           M+  +QK  +K + F+   FG R+P+++  DGTF    L  +I    + + + L A  +L
Sbjct: 1   MKITRQKHAKKHLGFFRNNFGVREPYQILLDGTFCQAALRGRI-QLREQLPRYLMAETQL 60

Query: 61  FATRCVISELKALGQSYSEAFDAANSLFTARCDH-ERRKSAEACIIDVIGESNAEHFFVA 120
             TRCV+ EL+ LG+    A   A       C H +   S   C++ ++ + N  H+F+A
Sbjct: 61  CTTRCVLKELETLGKDLYGAKLIAQKCQVRNCPHFKNAVSGSECLLSMVEDGNPHHYFLA 120

Query: 121 TQDSHLRKKLQEIPGVPLIFCLRNALFMEQPSAVERQFVKSAEEKRLHMSEGERNLLKKK 180
           TQD +L  K+++ PG+PL+F ++N + +++PS     FVK+ E  +L +S  E+  +++ 
Sbjct: 121 TQDQNLSMKVKKKPGIPLMFIIQNTIVLDKPSPKTIAFVKAVESGQL-VSVHEKQSIRQ- 180

Query: 181 MKYEVETEKTNEDGDLGDQNLETQVLEKKKTRVPDNLKDRPQFKRKRAKGPNPLSCLKKK 240
                                    L++++  V D  + R + KRK+  GPNPLSCLKKK
Sbjct: 181 -------------------------LKEEQGLVKDP-EQRRRKKRKKVSGPNPLSCLKKK 236

Query: 241 KKPNPSQHPVSAKKDDDNATEKRTRKRKRSRKAKT 275
           KK           +D +++  ++ RKRKR R   T
Sbjct: 241 KK----------TQDTNSSASEKKRKRKRIRNRST 236

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BLAST of Lcy09g013450 vs. ExPASy Swiss-Prot
Match: O74862 (rRNA-processing protein utp23 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=utp23 PE=3 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 7.8e-19
Identity = 81/275 (29.45%), Postives = 125/275 (45.45%), Query Frame = 0


Query: 1   MRFKKQKRHRKAVRFYTACFGFRQPFKVFCDGTFVHHLLSHQILPANDAIAKILGAPVKL 60
           MR K+ K +RK +  Y   FGFR+P++V  D  F+   LS Q +    A+A+ +   +K 
Sbjct: 1   MRQKRAKNYRKLMHTYQLLFGFREPYQVLVDADFLKD-LSQQKIDIQAALARTVQGAIKP 60

Query: 61  FATRCVISELKALGQSYSEAFDAANSLFTARCDH-ERRKSAEACIIDV--IGESNAEHFF 120
             T+C I +L +      +    A S    RC H +   S   CI  V  I   N   + 
Sbjct: 61  MITQCCIRQLYSKSDELKQEIRIAKSFERRRCGHIDEALSPSECIQSVVNINGRNKHRYV 120

Query: 121 VATQDSHLRKKLQEIPGVPLIFCLRNALFMEQPSAVERQFVKSAEEKRLHMSEGERNLLK 180
           VATQD  LR+ L+ +PGVPLI+  R+ + +E  S        + E  ++ MS+ E+ LL 
Sbjct: 121 VATQDPELRQALRSVPGVPLIYMKRSVVILEPASRATLLEKHNKESVQMGMSKEEKLLLS 180

Query: 181 KKMK----YEVETEKTNEDGDLGDQNLETQVLEKKKTRVPDNLKDRPQFKRKRAKGPNPL 240
            K +      ++ + T E  DL                  ++   +   KRK  KGPNPL
Sbjct: 181 GKKRSANELAIDDQDTKESTDLAG---------------TEDSAPKANKKRKGPKGPNPL 240

Query: 241 SCLKKKKKPNPSQHPVSAKKDDDNATEKRTRKRKR 269
           S  K+  K + +  P        +  E++  +RKR
Sbjct: 241 SIKKRSSKNHTTDEPTLPVNIIGDVGERKKHRRKR 259

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BLAST of Lcy09g013450 vs. ExPASy Swiss-Prot
Match: Q12339 (rRNA-processing protein UTP23 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=UTP23 PE=1 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 8.0e-16
Identity = 88/287 (30.66%), Postives = 134/287 (46.69%), Query Frame = 0


Query: 1   MRFKKQKRHRKAVRFYTACFGFRQPFKVFCDGTFVHHLLSHQI-LPANDAIAKILGAPVK 60
           MR K+ K +RK +  Y+  F FR+P++V  D   V    +    LP+   + + L A VK
Sbjct: 1   MRQKRAKSYRKQLLVYSHTFKFREPYQVLVDNQLVLECNNSNFNLPS--GLKRTLQADVK 60

Query: 61  LFATRCVISELKALGQSYSE-AFDAANSLFTARCDHERR--KSAEACIIDVIGES--NAE 120
           +  T+C I   +AL ++ ++ A + A      RC+H  +  KS   CI  V+  S  N  
Sbjct: 61  VMITQCCI---QALYETRNDGAINLAKQFERRRCNHSFKDPKSPAECIESVVNISGANKH 120

Query: 121 HFFVATQDSHLRKKLQEIPGVPLIFCLRNALFMEQPSAVERQFVKSAEEKRLHMSEGERN 180
            + VA+QD  LR+KL+ +PGVPLI   R+ + ME  S    +  K  EE++L+    + N
Sbjct: 121 RYVVASQDIDLRRKLRTVPGVPLIHLTRSVMVMEPLSTASAKASKITEEQKLYKGLNDPN 180

Query: 181 LLKKKMKYEVETEKTNEDGDLGDQNLETQVLEKKKTRVPDNLKDRPQFKRKRAKGPNPLS 240
           +           EK  E GD   +    + + KK+   P              K PNPLS
Sbjct: 181 I-----------EKLQESGDGSGK----ESITKKRKLGP--------------KAPNPLS 240

Query: 241 CLKKKKKPNPSQHPVSAKKDDDNATEKRTRKRKRSRKAKTPTETTST 282
             KKKK  +PS       K+D +  +K+ R+RK       P    +T
Sbjct: 241 VKKKKKVNSPSDE--VKDKEDTSKEKKKRRRRKHKSNTNVPVSNGTT 251

[Close]

BLAST of Lcy09g013450 vs. ExPASy TrEMBL
Match: A0A1S3CNY6 (rRNA-processing protein UTP23 homolog OS=Cucumis melo OX=3656 GN=LOC103503039 PE=4 SV=1)

HSP 1 Score: 405.2 bits (1040), Expect = 2.2e-109
Identity = 215/282 (76.24%), Postives = 246/282 (87.23%), Query Frame = 0


Query: 1   MRFKKQKRHRKAVRFYTACFGFRQPFKVFCDGTFVHHLLSHQILPANDAIAKILGAPVKL 60
           MR KKQKR R+AVRFYT C GFR PFK+FCDGTFV+HLLS+QI+PA++A+AK +G  VKL
Sbjct: 1   MRIKKQKRQRRAVRFYTTCCGFRPPFKIFCDGTFVNHLLSNQIMPADEAVAKTVGDRVKL 60

Query: 61  FATRCVISELKALGQSYSEAFDAANSLFTARCDHERRKSAEACIIDVIGESNAEHFFVAT 120
           F TRCV+ ELKALGQSY+ AF+AA+ LFTARCDHE+RKSAEACI+DVIGESN EHFFVAT
Sbjct: 61  FTTRCVLLELKALGQSYAGAFEAASQLFTARCDHEKRKSAEACILDVIGESNPEHFFVAT 120

Query: 121 QDSHLRKKLQEIPGVPLIFCLRNALFMEQPSAVERQFVKSAEEKRLHMSEGERNLLKKKM 180
           QD++LRK+LQ+IPGVPLIF LRN LFMEQPS V+RQFVKS EEKR+HMSE ER+LLKKKM
Sbjct: 121 QDTNLRKQLQQIPGVPLIFGLRNTLFMEQPSDVQRQFVKSLEEKRMHMSEAERDLLKKKM 180

Query: 181 KYEVETEKTNEDGDLGDQNLETQVLEKKKTRVPDNLKDRPQFKRKRAKGPNPLSCLKKKK 240
           KY VE EKTNED DLGDQNL+ QVL+KKK  +  NLKDRPQFKR +AKGPNPLSCLKKK 
Sbjct: 181 KYVVEAEKTNEDEDLGDQNLDAQVLKKKK-NILSNLKDRPQFKRNKAKGPNPLSCLKKKV 240

Query: 241 KPNPSQHPVS-AKKDDDNATEKRTRKRKRSRKAKTPTETTST 282
           KP+P  HPVS  KKDDD+  +KRTRKRKRSRKAK PTET ++
Sbjct: 241 KPSP--HPVSEKKKDDDDLAQKRTRKRKRSRKAKAPTETVTS 279

[Close]

BLAST of Lcy09g013450 vs. ExPASy TrEMBL
Match: A0A6J1CLD6 (rRNA-processing protein UTP23 homolog OS=Momordica charantia OX=3673 GN=LOC111012016 PE=4 SV=1)

HSP 1 Score: 400.6 bits (1028), Expect = 5.4e-108
Identity = 215/283 (75.97%), Postives = 245/283 (86.57%), Query Frame = 0


Query: 1   MRFKKQKRHRKAVRFYTACFGFRQPFKVFCDGTFVHHLLSHQILPANDAIAKILGAPVKL 60
           MRFK+QKRHR+ VRFY ACFGFRQPFKV CDGTFVHHLLS++I+PA++A+AK +G P+KL
Sbjct: 1   MRFKRQKRHRRVVRFYAACFGFRQPFKVLCDGTFVHHLLSNRIVPADNALAKTIGGPIKL 60

Query: 61  FATRCVISELKALGQSYSEAFDAANSLFTARCDHERRKSAEACIIDVIGESNAEHFFVAT 120
           F TRCV+SELKALGQSYSEAFDAA+ L  ARCDHERRKSAEACI DVIGESNAEHFFVAT
Sbjct: 61  FTTRCVLSELKALGQSYSEAFDAASRLLIARCDHERRKSAEACISDVIGESNAEHFFVAT 120

Query: 121 QDSHLRKKLQEIPGVPLIFCLRNALFMEQPSAVERQFVKSAEEKRLHMSEGERNLLKKKM 180
           QD+ LRKKLQEIPGVPL++ LRNALFMEQPS ++RQFVKS+EE+RLHMSE ER+LLKK+ 
Sbjct: 121 QDTDLRKKLQEIPGVPLVYGLRNALFMEQPSVLQRQFVKSSEEERLHMSELERDLLKKR- 180

Query: 181 KYEVETEKTNEDGDLGDQNLETQVLEKKKTRVPDNLKDRPQFKRKRAKGPNPLSCLKKKK 240
           KY VETE+TNED  LGDQNLETQ ++K+ T   + LKD+ QFKRK+AKGPNPLSC  KKK
Sbjct: 181 KYRVETEETNEDRGLGDQNLETQAMKKRST--SNELKDKIQFKRKKAKGPNPLSC--KKK 240

Query: 241 KPNPSQHPVSA--KKDDDNATEKRTRKRKRSRKAKTPTETTST 282
           K NPSQHPVS   KKD+D+A E RTRKRKRSRKAK P  T  T
Sbjct: 241 KENPSQHPVSEKHKKDNDSAAESRTRKRKRSRKAKMPATTMGT 278

[Close]

BLAST of Lcy09g013450 vs. ExPASy TrEMBL
Match: A0A6J1E579 (rRNA-processing protein UTP23 homolog isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430840 PE=4 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 2.6e-102
Identity = 210/284 (73.94%), Postives = 241/284 (84.86%), Query Frame = 0


Query: 1   MRFKKQKRHRKAVRFYTACFGFRQPFKVFCDGTFVHHLLSHQILPANDAIAKILGAPVKL 60
           MRFKKQKRHRKAVRFYT CFGFR+PFKV CDGTFVHHLLS+QILPA+ A+AK+LG  VK+
Sbjct: 1   MRFKKQKRHRKAVRFYTTCFGFREPFKVLCDGTFVHHLLSNQILPADAALAKVLGGRVKV 60

Query: 61  FATRCVISELKALGQSYSEAFDAANSLFTARCDHERRKSAEACIIDVIGESNAEHFFVAT 120
           F TRCV+ ELKALG SYS+AF+AA++L TARCDHE RK A  CI++VIG+SNAEHFFVAT
Sbjct: 61  FTTRCVLLELKALGPSYSKAFEAASNLSTARCDHEIRKHAVTCIMEVIGKSNAEHFFVAT 120

Query: 121 QDSHLRKKLQEIPGVPLIFCLRNALFMEQPSAVERQFVKSAEEKRLHMSEGERNLLKKKM 180
           QD+ L+K+LQEIPGVPLIF LRNALFMEQP+A+ERQFVKS+EEKR H+SE E NLL+K  
Sbjct: 121 QDTDLKKQLQEIPGVPLIFGLRNALFMEQPTALERQFVKSSEEKRSHISEVELNLLQKVT 180

Query: 181 K-YEVETEKTNEDGDLGDQNLETQVLEKKKTRVP--DNLKDRPQFKRKRAKGPNPLSCLK 240
           K  E ETE TNEDGDL  +N E QVLEKKK +    ++LKDRPQFKRK+ KGPNPLSCLK
Sbjct: 181 KDDEEETEITNEDGDLVGKNSEMQVLEKKKKKRGNLNDLKDRPQFKRKKTKGPNPLSCLK 240

Query: 241 KKKKPNPSQHPVSAKKDDDNATEKRTRKRKRSRKAKTPTETTST 282
           KKKK +P+QHPVS KK DDN T KRTRKRKR+RK KT  ET +T
Sbjct: 241 KKKKVDPNQHPVSEKKADDNTT-KRTRKRKRARKTKTTAETGAT 283

[Close]

BLAST of Lcy09g013450 vs. ExPASy TrEMBL
Match: A0A6J1JT87 (rRNA-processing protein UTP23 homolog isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487635 PE=4 SV=1)

HSP 1 Score: 381.3 bits (978), Expect = 3.4e-102
Identity = 209/281 (74.38%), Postives = 239/281 (85.05%), Query Frame = 0


Query: 1   MRFKKQKRHRKAVRFYTACFGFRQPFKVFCDGTFVHHLLSHQILPANDAIAKILGAPVKL 60
           MRFKKQKRHRKAVRFYT CFGFR+PFKV CDGTFVHHLLS+QILPA+ A+AK+LG  VK+
Sbjct: 1   MRFKKQKRHRKAVRFYTTCFGFREPFKVLCDGTFVHHLLSNQILPADAALAKVLGGRVKV 60

Query: 61  FATRCVISELKALGQSYSEAFDAANSLFTARCDHERRKSAEACIIDVIGESNAEHFFVAT 120
           F TRCV+ ELKALG SYS+AF+AA++L TARCDHE RK A  CI++VIG+SNAEHFFVAT
Sbjct: 61  FTTRCVLLELKALGPSYSKAFEAASNLSTARCDHEIRKHAVTCIMEVIGKSNAEHFFVAT 120

Query: 121 QDSHLRKKLQEIPGVPLIFCLRNALFMEQPSAVERQFVKSAEEKRLHMSEGERNLLKKKM 180
           QD+ L+K+LQEIPGVPLIF LRNALFMEQP+A+ERQFVKS+EEKR H+SE E NLL+K  
Sbjct: 121 QDTDLKKQLQEIPGVPLIFGLRNALFMEQPTALERQFVKSSEEKRSHISEVELNLLQKVT 180

Query: 181 K-YEVETEKTNEDGDLGDQNLETQVLEKKKTRVP--DNLKDRPQFKRKRAKGPNPLSCLK 240
           K  E ETE TNEDGDL  +N E QVLEKKK +    ++LKDRPQFKRK+ KGPNPLSCLK
Sbjct: 181 KDDEEETEITNEDGDLVGKNSEMQVLEKKKKKRGNLNDLKDRPQFKRKKTKGPNPLSCLK 240

Query: 241 KKKKPNPSQHPVSAKKDDDNATEKRTRKRKRSRKAKTPTET 279
           KKKK +P+QHPVS KK DDN T KRTRKRKR+RK KT  ET
Sbjct: 241 KKKKVDPNQHPVSEKKADDNTT-KRTRKRKRARKTKTTAET 280

[Close]

BLAST of Lcy09g013450 vs. ExPASy TrEMBL
Match: A0A6J1E589 (rRNA-processing protein UTP23 homolog isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111430840 PE=4 SV=1)

HSP 1 Score: 377.5 bits (968), Expect = 4.9e-101
Identity = 208/284 (73.24%), Postives = 240/284 (84.51%), Query Frame = 0


Query: 1   MRFKKQKRHRKAVRFYTACFGFRQPFKVFCDGTFVHHLLSHQILPANDAIAKILGAPVKL 60
           MRFKKQKRHRKAVRFYT CFGFR+PFKV CDGTFVHHLLS+QILPA+ A+AK+LG  VK+
Sbjct: 1   MRFKKQKRHRKAVRFYTTCFGFREPFKVLCDGTFVHHLLSNQILPADAALAKVLGGRVKV 60

Query: 61  FATRCVISELKALGQSYSEAFDAANSLFTARCDHERRKSAEACIIDVIGESNAEHFFVAT 120
           F TRCV+ ELKALG SYS+AF+AA++L TARCDHE RK A  CI++VIG+SNAEHFFVAT
Sbjct: 61  FTTRCVLLELKALGPSYSKAFEAASNLSTARCDHEIRKHAVTCIMEVIGKSNAEHFFVAT 120

Query: 121 QDSHLRKKLQEIPGVPLIFCLRNALFMEQPSAVERQFVKSAEEKRLHMSEGERNLLKKKM 180
           QD+ L+K+LQEIPGVPLIF LRNALFMEQP+A+ERQFVKS+EEKR H+SE E NLL+K  
Sbjct: 121 QDTDLKKQLQEIPGVPLIFGLRNALFMEQPTALERQFVKSSEEKRSHISEVELNLLQKVT 180

Query: 181 K-YEVETEKTNEDGDLGDQNLETQVLEKKKTRVP--DNLKDRPQFKRKRAKGPNPLSCLK 240
           K  E ETE TNEDGDL  +N E QVLEKKK +    ++LKDRPQFKRK+ KGPNPLSCLK
Sbjct: 181 KDDEEETEITNEDGDLVGKNSEMQVLEKKKKKRGNLNDLKDRPQFKRKKTKGPNPLSCLK 240

Query: 241 KKKKPNPSQHPVSAKKDDDNATEKRTRKRKRSRKAKTPTETTST 282
           KKKK +P+QHPVS K DD+  T KRTRKRKR+RK KT  ET +T
Sbjct: 241 KKKKVDPNQHPVSEKADDN--TTKRTRKRKRARKTKTTAETGAT 282

[Close]

BLAST of Lcy09g013450 vs. NCBI nr
Match: XP_011655276.1 (rRNA-processing protein UTP23 homolog isoform X2 [Cucumis sativus])

HSP 1 Score: 412.5 bits (1059), Expect = 2.9e-111
Identity = 215/278 (77.34%), Postives = 244/278 (87.77%), Query Frame = 0


Query: 1   MRFKKQKRHRKAVRFYTACFGFRQPFKVFCDGTFVHHLLSHQILPANDAIAKILGAPVKL 60
           MR KKQKR R+AVRFYT C GFR PFK+FCDGTFV+HLLS+QI+PA++A+AK +G  VKL
Sbjct: 1   MRIKKQKRQRRAVRFYTTCCGFRPPFKIFCDGTFVNHLLSNQIMPADEAVAKTVGDRVKL 60

Query: 61  FATRCVISELKALGQSYSEAFDAANSLFTARCDHERRKSAEACIIDVIGESNAEHFFVAT 120
           F TRCV+ ELKALGQSYS AF+AA+ LFTARCDHE+RKSAEACI+DVIGESN EHFFVAT
Sbjct: 61  FTTRCVLLELKALGQSYSGAFEAASQLFTARCDHEKRKSAEACILDVIGESNPEHFFVAT 120

Query: 121 QDSHLRKKLQEIPGVPLIFCLRNALFMEQPSAVERQFVKSAEEKRLHMSEGERNLLKKKM 180
           QD++LRK+LQ+IPGVPLIF LRNALFMEQPS V+RQFVKS EEKR+H+SE ER+LLKKK 
Sbjct: 121 QDTNLRKQLQQIPGVPLIFGLRNALFMEQPSDVQRQFVKSLEEKRMHVSEVERDLLKKKT 180

Query: 181 KYEVETEKTNEDGDLGDQNLETQVLEKKKTRVPDNLKDRPQFKRKRAKGPNPLSCLKKKK 240
           KY VE EKTNED DL DQNL+T VL+KKK  +P NLKDRPQFKR +AKGPNPLSCLKKK 
Sbjct: 181 KYVVEAEKTNEDEDLEDQNLDTLVLKKKKKNIPSNLKDRPQFKRNKAKGPNPLSCLKKKV 240

Query: 241 KPNPSQHPVSAKKDDDNATEKRTRKRKRSRKAKTPTET 279
           KP+P  HPVS KKDDD+  +KRTRKRKRSRKAK PTET
Sbjct: 241 KPSP--HPVSEKKDDDSVAQKRTRKRKRSRKAKAPTET 276

[Close]

BLAST of Lcy09g013450 vs. NCBI nr
Match: XP_004143766.1 (rRNA-processing protein UTP23 homolog isoform X1 [Cucumis sativus] >XP_011655273.1 rRNA-processing protein UTP23 homolog isoform X1 [Cucumis sativus] >XP_011655274.1 rRNA-processing protein UTP23 homolog isoform X1 [Cucumis sativus] >XP_031742195.1 rRNA-processing protein UTP23 homolog isoform X1 [Cucumis sativus] >XP_031742196.1 rRNA-processing protein UTP23 homolog isoform X1 [Cucumis sativus] >XP_031742197.1 rRNA-processing protein UTP23 homolog isoform X1 [Cucumis sativus] >XP_031742198.1 rRNA-processing protein UTP23 homolog isoform X1 [Cucumis sativus] >KAE8648473.1 hypothetical protein Csa_007759 [Cucumis sativus])

HSP 1 Score: 407.9 bits (1047), Expect = 7.0e-110
Identity = 215/279 (77.06%), Postives = 244/279 (87.46%), Query Frame = 0


Query: 1   MRFKKQKRHRKAVRFYTACFGFRQPFKVFCDGTFVHHLLSHQILPANDAIAKILGAPVKL 60
           MR KKQKR R+AVRFYT C GFR PFK+FCDGTFV+HLLS+QI+PA++A+AK +G  VKL
Sbjct: 1   MRIKKQKRQRRAVRFYTTCCGFRPPFKIFCDGTFVNHLLSNQIMPADEAVAKTVGDRVKL 60

Query: 61  FATRCVISELKALGQSYSEAFDAANSLFTARCDHERRKSAEACIIDVIGESNAEHFFVAT 120
           F TRCV+ ELKALGQSYS AF+AA+ LFTARCDHE+RKSAEACI+DVIGESN EHFFVAT
Sbjct: 61  FTTRCVLLELKALGQSYSGAFEAASQLFTARCDHEKRKSAEACILDVIGESNPEHFFVAT 120

Query: 121 QDSHLRKKLQEIPGVPLIFCLRNALFMEQPSAVERQFVKSAEEKRLHMSEGERNLLKKKM 180
           QD++LRK+LQ+IPGVPLIF LRNALFMEQPS V+RQFVKS EEKR+H+SE ER+LLKKK 
Sbjct: 121 QDTNLRKQLQQIPGVPLIFGLRNALFMEQPSDVQRQFVKSLEEKRMHVSEVERDLLKKKT 180

Query: 181 KYEVETEKTNEDGDLGDQNLETQVLEKKKTRVPDNLKDRPQFKRKRAKGPNPLSCLKKKK 240
           KY VE EKTNED DL DQNL+T VL+KKK  +P NLKDRPQFKR +AKGPNPLSCLKKK 
Sbjct: 181 KYVVEAEKTNEDEDLEDQNLDTLVLKKKKKNIPSNLKDRPQFKRNKAKGPNPLSCLKKKV 240

Query: 241 KPNPSQHPVS-AKKDDDNATEKRTRKRKRSRKAKTPTET 279
           KP+P  HPVS  KKDDD+  +KRTRKRKRSRKAK PTET
Sbjct: 241 KPSP--HPVSEKKKDDDSVAQKRTRKRKRSRKAKAPTET 277

[Close]

BLAST of Lcy09g013450 vs. NCBI nr
Match: XP_008465424.1 (PREDICTED: rRNA-processing protein UTP23 homolog [Cucumis melo] >XP_008465433.1 PREDICTED: rRNA-processing protein UTP23 homolog [Cucumis melo] >XP_008465440.1 PREDICTED: rRNA-processing protein UTP23 homolog [Cucumis melo] >XP_008465448.1 PREDICTED: rRNA-processing protein UTP23 homolog [Cucumis melo] >XP_008465455.1 PREDICTED: rRNA-processing protein UTP23 homolog [Cucumis melo] >XP_008465460.1 PREDICTED: rRNA-processing protein UTP23 homolog [Cucumis melo])

HSP 1 Score: 405.2 bits (1040), Expect = 4.6e-109
Identity = 215/282 (76.24%), Postives = 246/282 (87.23%), Query Frame = 0


Query: 1   MRFKKQKRHRKAVRFYTACFGFRQPFKVFCDGTFVHHLLSHQILPANDAIAKILGAPVKL 60
           MR KKQKR R+AVRFYT C GFR PFK+FCDGTFV+HLLS+QI+PA++A+AK +G  VKL
Sbjct: 1   MRIKKQKRQRRAVRFYTTCCGFRPPFKIFCDGTFVNHLLSNQIMPADEAVAKTVGDRVKL 60

Query: 61  FATRCVISELKALGQSYSEAFDAANSLFTARCDHERRKSAEACIIDVIGESNAEHFFVAT 120
           F TRCV+ ELKALGQSY+ AF+AA+ LFTARCDHE+RKSAEACI+DVIGESN EHFFVAT
Sbjct: 61  FTTRCVLLELKALGQSYAGAFEAASQLFTARCDHEKRKSAEACILDVIGESNPEHFFVAT 120

Query: 121 QDSHLRKKLQEIPGVPLIFCLRNALFMEQPSAVERQFVKSAEEKRLHMSEGERNLLKKKM 180
           QD++LRK+LQ+IPGVPLIF LRN LFMEQPS V+RQFVKS EEKR+HMSE ER+LLKKKM
Sbjct: 121 QDTNLRKQLQQIPGVPLIFGLRNTLFMEQPSDVQRQFVKSLEEKRMHMSEAERDLLKKKM 180

Query: 181 KYEVETEKTNEDGDLGDQNLETQVLEKKKTRVPDNLKDRPQFKRKRAKGPNPLSCLKKKK 240
           KY VE EKTNED DLGDQNL+ QVL+KKK  +  NLKDRPQFKR +AKGPNPLSCLKKK 
Sbjct: 181 KYVVEAEKTNEDEDLGDQNLDAQVLKKKK-NILSNLKDRPQFKRNKAKGPNPLSCLKKKV 240

Query: 241 KPNPSQHPVS-AKKDDDNATEKRTRKRKRSRKAKTPTETTST 282
           KP+P  HPVS  KKDDD+  +KRTRKRKRSRKAK PTET ++
Sbjct: 241 KPSP--HPVSEKKKDDDDLAQKRTRKRKRSRKAKAPTETVTS 279

[Close]

BLAST of Lcy09g013450 vs. NCBI nr
Match: XP_022141733.1 (rRNA-processing protein UTP23 homolog [Momordica charantia])

HSP 1 Score: 400.6 bits (1028), Expect = 1.1e-107
Identity = 215/283 (75.97%), Postives = 245/283 (86.57%), Query Frame = 0


Query: 1   MRFKKQKRHRKAVRFYTACFGFRQPFKVFCDGTFVHHLLSHQILPANDAIAKILGAPVKL 60
           MRFK+QKRHR+ VRFY ACFGFRQPFKV CDGTFVHHLLS++I+PA++A+AK +G P+KL
Sbjct: 1   MRFKRQKRHRRVVRFYAACFGFRQPFKVLCDGTFVHHLLSNRIVPADNALAKTIGGPIKL 60

Query: 61  FATRCVISELKALGQSYSEAFDAANSLFTARCDHERRKSAEACIIDVIGESNAEHFFVAT 120
           F TRCV+SELKALGQSYSEAFDAA+ L  ARCDHERRKSAEACI DVIGESNAEHFFVAT
Sbjct: 61  FTTRCVLSELKALGQSYSEAFDAASRLLIARCDHERRKSAEACISDVIGESNAEHFFVAT 120

Query: 121 QDSHLRKKLQEIPGVPLIFCLRNALFMEQPSAVERQFVKSAEEKRLHMSEGERNLLKKKM 180
           QD+ LRKKLQEIPGVPL++ LRNALFMEQPS ++RQFVKS+EE+RLHMSE ER+LLKK+ 
Sbjct: 121 QDTDLRKKLQEIPGVPLVYGLRNALFMEQPSVLQRQFVKSSEEERLHMSELERDLLKKR- 180

Query: 181 KYEVETEKTNEDGDLGDQNLETQVLEKKKTRVPDNLKDRPQFKRKRAKGPNPLSCLKKKK 240
           KY VETE+TNED  LGDQNLETQ ++K+ T   + LKD+ QFKRK+AKGPNPLSC  KKK
Sbjct: 181 KYRVETEETNEDRGLGDQNLETQAMKKRST--SNELKDKIQFKRKKAKGPNPLSC--KKK 240

Query: 241 KPNPSQHPVSA--KKDDDNATEKRTRKRKRSRKAKTPTETTST 282
           K NPSQHPVS   KKD+D+A E RTRKRKRSRKAK P  T  T
Sbjct: 241 KENPSQHPVSEKHKKDNDSAAESRTRKRKRSRKAKMPATTMGT 278

[Close]

BLAST of Lcy09g013450 vs. NCBI nr
Match: KAG7032659.1 (rRNA-processing protein UTP23-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 387.9 bits (995), Expect = 7.5e-104
Identity = 211/281 (75.09%), Postives = 241/281 (85.77%), Query Frame = 0


Query: 1   MRFKKQKRHRKAVRFYTACFGFRQPFKVFCDGTFVHHLLSHQILPANDAIAKILGAPVKL 60
           MRFKKQKRHRKAVRFYT CFGFR+PFKV CDGTFVHHLLS+QILPA+ A+AK+LG  VK+
Sbjct: 1   MRFKKQKRHRKAVRFYTTCFGFREPFKVLCDGTFVHHLLSNQILPADAALAKVLGGRVKV 60

Query: 61  FATRCVISELKALGQSYSEAFDAANSLFTARCDHERRKSAEACIIDVIGESNAEHFFVAT 120
           F TRCV+ ELKALG SYS+AF+AA++L TARCDHE RK A  CI++VIG+SNAEHFFVAT
Sbjct: 61  FTTRCVLLELKALGPSYSKAFEAASNLSTARCDHEIRKHAVTCIMEVIGKSNAEHFFVAT 120

Query: 121 QDSHLRKKLQEIPGVPLIFCLRNALFMEQPSAVERQFVKSAEEKRLHMSEGERNLLKKKM 180
           QD+ L+K+LQEIPGVPLIF LRNALFMEQP+A+ERQFVKS+EEKR H+SE E NLL+K  
Sbjct: 121 QDTDLKKQLQEIPGVPLIFGLRNALFMEQPTALERQFVKSSEEKRSHISEVELNLLRKVT 180

Query: 181 K-YEVETEKTNEDGDLGDQNLETQVLEKKKTRVP--DNLKDRPQFKRKRAKGPNPLSCLK 240
           K  E ETEKTNEDGDL D+N E QVLEKKK +    ++LKDRPQFKRK+ KGPNPLSCLK
Sbjct: 181 KDDEEETEKTNEDGDLVDKNSEMQVLEKKKKKKGNLNDLKDRPQFKRKKTKGPNPLSCLK 240

Query: 241 KKKKPNPSQHPVSAKKDDDNATEKRTRKRKRSRKAKTPTET 279
           KKKK +P+QHPVS KK DDN T KRTRKRKR+RK KT  ET
Sbjct: 241 KKKKVDPNQHPVSEKKADDNTT-KRTRKRKRARKTKTTAET 280

[Close]

BLAST of Lcy09g013450 vs. TAIR 10
Match: AT2G34570.1 (PIN domain-like family protein )

HSP 1 Score: 243.4 bits (620), Expect = 2.1e-64
Identity = 136/286 (47.55%), Postives = 195/286 (68.18%), Query Frame = 0


Query: 1   MRFKKQKRHRKAVRFYTACFGFRQPFKVFCDGTFVHHLLSHQILPANDAIAKILGAPVKL 60
           MR K+QK++R+ VRF+T C+GFRQP+KV CDGTFVHHL++++I PA+ A++++LG PVKL
Sbjct: 1   MRVKRQKKNRRTVRFFTVCYGFRQPYKVLCDGTFVHHLVTNEITPADTAVSELLGGPVKL 60

Query: 61  FATRCVISELKALGQSYSEAFDAANSLFTARCDHERRKSAEACIIDVIGESNAEHFFVAT 120
           F TRCVI+EL+ LG+ ++E+ +AA +L TA C+HE  K+A+ C+ +VIG  N EHFF+ T
Sbjct: 61  FTTRCVIAELEKLGKDFAESLEAAQTLNTATCEHEEAKTADECLSEVIGVQNTEHFFLGT 120

Query: 121 QDSHLRKKLQEIPGVPLIFCLRNALFMEQPSAVERQFVKSAEEKRLHMSEGERNLLKKKM 180
           QD+  R+KLQ+   VPL+F LRN L ++QPS  +RQ  K +E KRL M++ E+ LL K+ 
Sbjct: 121 QDAEFRRKLQQESIVPLVFGLRNILLIDQPSDFQRQSAKDSENKRLTMTDTEKKLLVKRT 180

Query: 181 KYEVETEKTNEDGDLGDQNLETQVLEKKKTRVPDNLKDRPQFKRKRAKGPNPLSCLKKKK 240
              + + +     +    N E  +     T+    +KDRPQFKR RAKGPNPLSC+KKKK
Sbjct: 181 AKIIASNRK----EATIANEEWGMPRVVSTKNGLGVKDRPQFKRNRAKGPNPLSCMKKKK 240

Query: 241 -------KPNPSQHPVSAKKDDDNATEKRTRKRKRSRKAKTPTETT 280
                  K + + +    KK+  + T+KR+  RKRS+K K+  E T
Sbjct: 241 ENPQSKSKADSNSNAQKEKKEGGSDTQKRS--RKRSKKGKSGPERT 280

[Close]

BLAST of Lcy09g013450 vs. TAIR 10
Match: AT2G46230.1 (PIN domain-like family protein )

HSP 1 Score: 55.1 bits (131), Expect = 1.1e-07
Identity = 36/127 (28.35%), Postives = 64/127 (50.39%), Query Frame = 0


Query: 25  PFKVFCDGTFVHHLLSHQILPANDAIAKILGAPVKLFATRCVISELKALGQSYSEAFDAA 84
           P++V  D  F++  + ++I      +   L A      T CV++EL+ LGQ Y  A   A
Sbjct: 62  PYRVLVDTNFINFSIQNKI-DLEKGMRDCLYANCTPCITDCVMAELEKLGQKYRVALRIA 121

Query: 85  NSLFTAR--CDHERRKSAEACIIDVIGESNAEHFFVATQDSHLRKKLQEIPGVPLIFCLR 144
                 R  C H +   A+ C++D + +     F VAT D  L++++++IPGVP+++   
Sbjct: 122 KDPHFERLPCIH-KGTYADDCLVDRVTQHKC--FIVATCDRDLKRRIRKIPGVPIMYVTN 181

Query: 145 NALFMEQ 150
               +E+
Sbjct: 182 RKYSIEK 184

The following BLAST results are available for this feature:

BLAST of Lcy09g013450 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9CX11	1.1e-25	32.73	rRNA-processing protein UTP23 homolog OS=Mus musculus OX=10090 GN=Utp23 PE=2 SV=...	[more]
Q9BRU9	1.6e-24	31.45	rRNA-processing protein UTP23 homolog OS=Homo sapiens OX=9606 GN=UTP23 PE=1 SV=2	[more]
Q08DU1	3.6e-24	30.55	rRNA-processing protein UTP23 homolog OS=Bos taurus OX=9913 GN=UTP23 PE=2 SV=1	[more]
O74862	7.8e-19	29.45	rRNA-processing protein utp23 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
Q12339	8.0e-16	30.66	rRNA-processing protein UTP23 OS=Saccharomyces cerevisiae (strain ATCC 204508 / ...	[more]

BLAST of Lcy09g013450 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CNY6	2.2e-109	76.24	rRNA-processing protein UTP23 homolog OS=Cucumis melo OX=3656 GN=LOC103503039 PE...	[more]
A0A6J1CLD6	5.4e-108	75.97	rRNA-processing protein UTP23 homolog OS=Momordica charantia OX=3673 GN=LOC11101...	[more]
A0A6J1E579	2.6e-102	73.94	rRNA-processing protein UTP23 homolog isoform X1 OS=Cucurbita moschata OX=3662 G...	[more]
A0A6J1JT87	3.4e-102	74.38	rRNA-processing protein UTP23 homolog isoform X1 OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A6J1E589	4.9e-101	73.24	rRNA-processing protein UTP23 homolog isoform X2 OS=Cucurbita moschata OX=3662 G...	[more]

BLAST of Lcy09g013450 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011655276.1	2.9e-111	77.34	rRNA-processing protein UTP23 homolog isoform X2 [Cucumis sativus]	[more]
XP_004143766.1	7.0e-110	77.06	rRNA-processing protein UTP23 homolog isoform X1 [Cucumis sativus] >XP_011655273...	[more]
XP_008465424.1	4.6e-109	76.24	PREDICTED: rRNA-processing protein UTP23 homolog [Cucumis melo] >XP_008465433.1 ...	[more]
XP_022141733.1	1.1e-107	75.97	rRNA-processing protein UTP23 homolog [Momordica charantia]	[more]
KAG7032659.1	7.5e-104	75.09	rRNA-processing protein UTP23-like protein [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of Lcy09g013450 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G34570.1	2.1e-64	47.55	PIN domain-like family protein	[more]
AT2G46230.1	1.1e-07	28.35	PIN domain-like family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006984	rRNA-processing protein Fcf1/Utp23	PFAM	PF04900	Fcf1	coord: 52..149 e-value: 1.8E-26 score: 92.3
None	No IPR available	GENE3D	3.40.50.1010		coord: 1..158 e-value: 8.6E-49 score: 167.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 204..282
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 247..262
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 222..246
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 204..221
None	No IPR available	PANTHER	PTHR12416:SF3	RRNA-PROCESSING PROTEIN UTP23 HOMOLOG	coord: 1..279
None	No IPR available	PANTHER	PTHR12416	UNCHARACTERIZED	coord: 1..279
None	No IPR available	CDD	cd08553	PIN_Fcf1-like	coord: 26..148 e-value: 5.16421E-52 score: 164.291
IPR029060	PIN-like domain superfamily	SUPERFAMILY	88723	PIN domain-like	coord: 25..150

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy09g013450.1	Lcy09g013450.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0032040	small-subunit processome