Lcy09g012460 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy09g012460
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	BHLH domain-containing protein
Location	Chr09: 13700494 .. 13704415 (+)
RNA-Seq Expression	Lcy09g012460
Synteny	Lcy09g012460

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCACTTGCAAATTCAGCAGTACAAGAAGTCGATGGCATGGAGAAAGCTGGTGGATATATGAAGACTTTAGCCATTGGAAGCCATGAGAATCCAAATGTAAACTTTGTGTTTCGAAACACGACTAATTACCAACTCGATCAGCAGCATCAGCAACAGCAAATGTCTCAGTCTTTGATCAACTTCAAGTGTGGGATTGAAAATCTTTTCCACAAGAACAATAATGAGTCTTTGCTGAGCTTTGAGCCACAAGGGGTTTGTCAAGACACTTACAATTGGGATCAGCAGCGTCTGATGGAAGATCCCAATTGCTTTCAAACAGCTACCAACAATTACAGCCCTGCAAAAGAGAACAAAAATGGAGATGGGTCTGTGTATGAGTGGCTTTATTCTGAACCTACTGCGGTTTCTGATGGCATTCAAGAGGCTGAACCTGCTCAGGAGATTGGAAATTATAAGCGACCCCATATGGTATTCAATCGTCTCGTTCAATTATAAGTTTGGTCTCTTGGATCTGTCTATTCAATTCGTTCTCTTCTAAATAATTTCTTTCGGTAGGTTATGAATTTTTAAATTTTTTTGTTGGTAAACAATTTAACCGTCAACGACTTATTTGACACAAAATAGAAAATTTAGAGATCTGTTGAAAACTTTTTAAAATGTAAAAATTAAAAAGGGAAATTACAATGGGTAGCAAAAAATATTAGGATATTTGCAAATCTAGCTATGATTTTTTAGGTTTGCAAACATAGCAAAATTTTAAAAATCTGATTTCCGTTTTTTTTATTATTCCAGTTTTACCCTTGTTGGTATATCAACAGGTATATTAGTAGTATATCTGATATACTTTATATTTACTGATATACGAAATATAATGTATATCAGTGAACTAATATACCAAATTTGATATACTTGAATGAATACAATGATATACCTAATATATACTTGATAGGATAAGCATAACATTTGATATACTTGATTAAATGTTGATATATCAATGATATACTTAATATGTTACTTTCTTTACTTATATTTGTTATGATTTCTTTTCTCTTTATTGAATTATGTTGTGTTATTTACATCTTTTAAAATGAAATGTCCTGTTATGAATGTTGATATACCATTGATATACCTCATTCGTTTTTTGTTTTTTTTAACTTACCTCATTTTTTTATACTAAAATAATTAATAACATTGATATACCTGATTAGGAGTAGCTAAATACATCAATGATAGACTTGTTATTAAGAAAAAAACCACTGATATATATTTTTAATTTTTGGTGTATTATGAAGGTCATGGAATGCAAAATTTGTTATAAGTATATCAATAAGATGCAATTTTAAGTATATCATTAGTGTATTAGTAGTCACTAAAAATGTAATTTAAAGTATATCATTAGTGTATCGGTAGTATATTATTAAGATGATGTATAATATATTGATGACATATTTGCCAAACATGAGCATAACTCAACTAGCATATATACACATTCAACCAAGACGTTAGAGGTTTAAATCCCCTACCACACATATTGTGTCCAAATAAAACTAATATTTCTAATTCTTTATTGATGAAGTATATCAAAGATATCTAAAAAAAGCTCATGTGTATACTTCATAAATGAAGTATATTATATTCATAAAATATACATCTGATATACTTTATATTTAGTATATCAGTTGATTGATATACCCAATATCTAGTATATCAGAACACTAAATAAATGAATGATGTACCTGATATACAGTATATCAATAACACCATTGATATACTTTTTAAAATTCCAGCGTGTTTTAGGGGTTTTTTTGACTTTTCAACTTTAATGCTTAGGCGGGCCCACGTTTTTTTGCTATATTTGCAACATTAAAAAACTGATGACATGGTTTCAAATTCCATATTATTTTTTGCTATTCTTGCAACTGCCCCAATTAAAAAGACATAATTTTCAAAGATCAAGATCCATTAAAAATTTTATACAAACACTGAGAATGACACAATTCTCAACATTTTAGACCTCATTTAATAACCAATTGAATTTTGTTTTTGAAAATTGTGCTTGTTCTTTTTCACTATTTCTTTACCATGGTTTTCATCATTCTTAAAAAACATTTGAAATTCTTAGCTAAATTCCAAAAAAAAAAAAAAAAAAAAAACCAAAAATACAATTTTTTAGTTTTCAAAACTCACATTAGATTTAGATAACATTTGTAATAAGGAAATAACAAACAAAGAAACCCATCGATGAAAGTAGTGTTTAAAAGTTTAGGCCCCGTTTGATAATCATTTGGTTTTTTAAAAAAAAAAAATTGCTTGTTTTCTTCCAATTTCTTTACCATGGTTTTCATCTTCGTTAAACACACATTTGAATTCTTAACCAAATTCTAAGAAAAAAACAAATTTTTAAAAACTACTCTTTTTTTTTTAGTTTTTAAAATCTGACTTTGTTTTTGAAACATGGAAAATGGAAGATGACAAAACAAATAAATTTATGGGCTGTAGTAGTATCTATAGGTTTAATTTTCAAAAATCAAAACCCAAAAATCGAATGGTTATCAAACCTGCTTGATTTAATTAAAAAAAAAAAAGAAAAAAAAAAGTTATCAATCCAGTTTTTGTTTTCTAAATTGGTGTCAACTAACAAAAGAAATGTTTGATTGATCGACAGGGAGAGAGCAGTGGGGGTGTTTGTAAGAAGCAATGCACAGCTACAGCTAAGAAACAGAAACCCAAATCATCAACAGCCAAGGATCCACAGAGCATTGCAGCCAAGGTTTTTTCTTTGTCTTTAAATGTTTTTGTTTTGACAACATTGGCTTGCAATTTAAGCAACAACAAGTGTAATTTTTAAGGTTCTGAAAGAATGTCTGTTTTGTTTTTGTTTCTTAGAATCGACGAGAGAGGATTAGCGAGCGGCTGAAGATACTGCAAGAATTGGTTCCCAATGGCTCCAAGGTGCTTACTGTTATCTAATATTAAAAAAAAAATGTTGATATATTGAAGGTAGAGTTTTAATTTCCATTAAAAGATTGACATTATTCTAAGCTAAATGTTTATACTATATTATTATAATATGCATAAGAACTCCAAAAAGATTAGGAAAATAAATATCATGTTGTAAAATAAGAAAAGCTTTGACTTTTTTCTTTTCCAGCTAATGAAAATTTGACCCTATTTTACTTCTAATTTGCAGGTTGATTTGGTAACCATGTTGGAGAAAGCAATTAGTTATGTCAAATTTCTTCAACTACAAGTGAAGGTACACATTTCCATTTCACTCTCTTTCCACATCTAGGGTTTCATCAGCAAAATTTTACATTTTAATTTTTTAGGTATAATCTTCAATAATGAAAATATAAGGAAACAAATTAAGGAATATCTTTTAAAATTTTACACTTGTTTGATAATCATTTGGTTTTTTATTTTTTATTTTTGAAAATTATGTTTGTTTTCTCCCAGTTTTCCTTTTCATCTTTGTTAAGGACACATTTGAATTTCTAGCCAAATTCCAAAAACAAAAACAAATTTTTGAAATAGTTTTCAAAAATTGGCTTGATTTTTTAAAACGTGGAAAGGAGATATTAGAAAAACAAAGAAACTTGTAGGTAAAAGTAGTGTTTATAAGTTTAATTTTCAAAAATAAAAAACCAAATGGTTATCAAACAGAGTTTTTAACTTTTTTTATATAGTTTTATTTAACGTATGACGACGAACTAGCTAGGGAACAATTGTTCCGTCCTTTCTTCTTTGCTCTGCCTTGATCTTTCTAGTTAAAAATTTTGAACTTCAGATCCTAGCGACCGATGAATTTTGGCCGGTTCAAGGAGGGAAAGCGCCTGATATTTCCCAAGTTAAGGAAGCCATTGATGCCATTCTTTCATCTCAAAGAGAAAGAAGCTCAAGCTCAAACAGTGAAAAGTGA

mRNA sequence

ATGGCACTTGCAAATTCAGCAGTACAAGAAGTCGATGGCATGGAGAAAGCTGGTGGATATATGAAGACTTTAGCCATTGGAAGCCATGAGAATCCAAATGTAAACTTTGTGTTTCGAAACACGACTAATTACCAACTCGATCAGCAGCATCAGCAACAGCAAATGTCTCAGTCTTTGATCAACTTCAAGTGTGGGATTGAAAATCTTTTCCACAAGAACAATAATGAGTCTTTGCTGAGCTTTGAGCCACAAGGGGTTTGTCAAGACACTTACAATTGGGATCAGCAGCGTCTGATGGAAGATCCCAATTGCTTTCAAACAGCTACCAACAATTACAGCCCTGCAAAAGAGAACAAAAATGGAGATGGGTCTGTGTATGAGTGGCTTTATTCTGAACCTACTGCGGTTTCTGATGGCATTCAAGAGGCTGAACCTGCTCAGGAGATTGGAAATTATAAGCGACCCCATATGGGAGAGAGCAGTGGGGGTGTTTGTAAGAAGCAATGCACAGCTACAGCTAAGAAACAGAAACCCAAATCATCAACAGCCAAGGATCCACAGAGCATTGCAGCCAAGAATCGACGAGAGAGGATTAGCGAGCGGCTGAAGATACTGCAAGAATTGGTTCCCAATGGCTCCAAGGTTGATTTGGTAACCATGTTGGAGAAAGCAATTAGTTATGTCAAATTTCTTCAACTACAAGTGAAGATCCTAGCGACCGATGAATTTTGGCCGGTTCAAGGAGGGAAAGCGCCTGATATTTCCCAAGTTAAGGAAGCCATTGATGCCATTCTTTCATCTCAAAGAGAAAGAAGCTCAAGCTCAAACAGTGAAAAGTGA

Coding sequence (CDS)

ATGGCACTTGCAAATTCAGCAGTACAAGAAGTCGATGGCATGGAGAAAGCTGGTGGATATATGAAGACTTTAGCCATTGGAAGCCATGAGAATCCAAATGTAAACTTTGTGTTTCGAAACACGACTAATTACCAACTCGATCAGCAGCATCAGCAACAGCAAATGTCTCAGTCTTTGATCAACTTCAAGTGTGGGATTGAAAATCTTTTCCACAAGAACAATAATGAGTCTTTGCTGAGCTTTGAGCCACAAGGGGTTTGTCAAGACACTTACAATTGGGATCAGCAGCGTCTGATGGAAGATCCCAATTGCTTTCAAACAGCTACCAACAATTACAGCCCTGCAAAAGAGAACAAAAATGGAGATGGGTCTGTGTATGAGTGGCTTTATTCTGAACCTACTGCGGTTTCTGATGGCATTCAAGAGGCTGAACCTGCTCAGGAGATTGGAAATTATAAGCGACCCCATATGGGAGAGAGCAGTGGGGGTGTTTGTAAGAAGCAATGCACAGCTACAGCTAAGAAACAGAAACCCAAATCATCAACAGCCAAGGATCCACAGAGCATTGCAGCCAAGAATCGACGAGAGAGGATTAGCGAGCGGCTGAAGATACTGCAAGAATTGGTTCCCAATGGCTCCAAGGTTGATTTGGTAACCATGTTGGAGAAAGCAATTAGTTATGTCAAATTTCTTCAACTACAAGTGAAGATCCTAGCGACCGATGAATTTTGGCCGGTTCAAGGAGGGAAAGCGCCTGATATTTCCCAAGTTAAGGAAGCCATTGATGCCATTCTTTCATCTCAAAGAGAAAGAAGCTCAAGCTCAAACAGTGAAAAGTGA

Protein sequence

MALANSAVQEVDGMEKAGGYMKTLAIGSHENPNVNFVFRNTTNYQLDQQHQQQQMSQSLINFKCGIENLFHKNNNESLLSFEPQGVCQDTYNWDQQRLMEDPNCFQTATNNYSPAKENKNGDGSVYEWLYSEPTAVSDGIQEAEPAQEIGNYKRPHMGESSGGVCKKQCTATAKKQKPKSSTAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKILATDEFWPVQGGKAPDISQVKEAIDAILSSQRERSSSSNSEK

Homology

[Close]

BLAST of Lcy09g012460 vs. ExPASy Swiss-Prot
Match: Q9FJ00 (Putative transcription factor bHLH086 OS=Arabidopsis thaliana OX=3702 GN=RSL1 PE=1 SV=2)

HSP 1 Score: 182.6 bits (462), Expect = 6.2e-45
Identity = 129/287 (44.95%), Postives = 170/287 (59.23%), Query Frame = 0


Query: 13  GMEKAGGYMKTLAIGSHENPNVNFVFRNTTNYQLDQQHQQQQMSQSLINFKCGIENLFHK 72
           G+++      +  I S    N  FVF  +     D          SL++F     + F  
Sbjct: 30  GLDEGASASSSSTINSDHQNNQGFVFYPSGETIEDH--------NSLMDFNA--SSFFTF 89

Query: 73  NNNESLLSFEPQGVC------QDTYNWD----------QQRLMEDPNCFQT------ATN 132
           +N+ SL+S    G          +Y++D            R+++ PN F+T       +N
Sbjct: 90  DNHRSLISPVTNGGAFPVVDGNMSYSYDGWSHHQVDSISPRVIKTPNSFETTSSFGLTSN 149

Query: 133 NYS-PAKENKNGDGSVYEWLYSEPTAVSDGIQEAEPAQEIGNYKRPHMGESSGGVCKKQC 192
           + S PA  + NGD     WLYS  T V+ G +    + ++   KRP  GE++  + KK  
Sbjct: 150 SMSKPATNHGNGD-----WLYSGSTIVNIGSRHESTSPKLAGNKRPFTGENT-QLSKKPS 209

Query: 193 TATAKKQKPKSSTA-KDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYV 252
           + T  K KPK++T+ KDPQS+AAKNRRERISERLK+LQELVPNG+KVDLVTMLEKAI YV
Sbjct: 210 SGTNGKIKPKATTSPKDPQSLAAKNRRERISERLKVLQELVPNGTKVDLVTMLEKAIGYV 269

Query: 253 KFLQLQVKILATDEFWPVQGGKAPDISQVKEAIDAILSSQRERSSSS 276
           KFLQ+QVK+LA DEFWP QGGKAPDISQVKEAIDAILSS +  S+S+
Sbjct: 270 KFLQVQVKVLAADEFWPAQGGKAPDISQVKEAIDAILSSSQRDSNST 300

[Close]

BLAST of Lcy09g012460 vs. ExPASy Swiss-Prot
Match: Q9C707 (Transcription factor RHD6 OS=Arabidopsis thaliana OX=3702 GN=RHD6 PE=1 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 6.9e-44
Identity = 102/150 (68.00%), Postives = 120/150 (80.00%), Query Frame = 0


Query: 127 EWLYSEPTAVSDGIQEAEPAQEIGNYKRPHMGESSGGVCKKQCTATAKKQKPKSSTA-KD 186
           +WLYS+ T V+ G +    + +    KR H GES+    KK  +    K KPK +T+ KD
Sbjct: 146 DWLYSDSTVVTTGSRNESLSPKSAGNKRSHTGEST-QPSKKLSSGVTGKTKPKPTTSPKD 205

Query: 187 PQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKILATDEFWP 246
           PQS+AAKNRRERISERLKILQELVPNG+KVDLVTMLEKAISYVKFLQ+QVK+LATDEFWP
Sbjct: 206 PQSLAAKNRRERISERLKILQELVPNGTKVDLVTMLEKAISYVKFLQVQVKVLATDEFWP 265

Query: 247 VQGGKAPDISQVKEAIDAIL-SSQRERSSS 275
            QGGKAPDISQVK+AIDAIL SSQR+R+S+
Sbjct: 266 AQGGKAPDISQVKDAIDAILSSSQRDRNSN 294

[Close]

BLAST of Lcy09g012460 vs. ExPASy Swiss-Prot
Match: Q8LEG1 (Transcription factor RSL3 OS=Arabidopsis thaliana OX=3702 GN=RSL4 PE=1 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 7.2e-17
Identity = 45/79 (56.96%), Postives = 60/79 (75.95%), Query Frame = 0


Query: 166 KKQCTATAKKQKPKSSTAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAI 225
           K   T+   K +    TA DPQS+ A+ RRE+I+ERLK LQ LVPNG+KVD+ TMLE+A+
Sbjct: 157 KASVTSVKGKTRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKVDISTMLEEAV 216

Query: 226 SYVKFLQLQVKILATDEFW 245
            YVKFLQLQ+K+L++D+ W
Sbjct: 217 HYVKFLQLQIKLLSSDDLW 235

[Close]

BLAST of Lcy09g012460 vs. ExPASy Swiss-Prot
Match: Q7XHI9 (Transcription factor bHLH84 OS=Arabidopsis thaliana OX=3702 GN=BHLH84 PE=1 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 9.4e-17
Identity = 43/70 (61.43%), Postives = 57/70 (81.43%), Query Frame = 0


Query: 175 KQKPKSSTAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQ 234
           K +     A DPQS+ A+ RRERI+ERL+ILQ LVPNG+KVD+ TMLE+A+ YVKFLQLQ
Sbjct: 236 KTRASRGAATDPQSLYARKRRERINERLRILQHLVPNGTKVDISTMLEEAVQYVKFLQLQ 295

Query: 235 VKILATDEFW 245
           +K+L++D+ W
Sbjct: 296 IKLLSSDDLW 305

[Close]

BLAST of Lcy09g012460 vs. ExPASy Swiss-Prot
Match: Q84WK0 (Transcription factor RSL2 OS=Arabidopsis thaliana OX=3702 GN=RSL2 PE=2 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 1.2e-16
Identity = 43/70 (61.43%), Postives = 57/70 (81.43%), Query Frame = 0


Query: 175 KQKPKSSTAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQ 234
           K +     A DPQS+ A+ RRERI+ERL+ILQ LVPNG+KVD+ TMLE+A+ YVKFLQLQ
Sbjct: 265 KTRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQ 324

Query: 235 VKILATDEFW 245
           +K+L++D+ W
Sbjct: 325 IKLLSSDDLW 334

[Close]

BLAST of Lcy09g012460 vs. ExPASy TrEMBL
Match: A0A6J1JPE9 (putative transcription factor bHLH086 OS=Cucurbita maxima OX=3661 GN=LOC111487700 PE=4 SV=1)

HSP 1 Score: 458.8 bits (1179), Expect = 1.7e-125
Identity = 243/282 (86.17%), Postives = 255/282 (90.43%), Query Frame = 0


Query: 1   MALANSAVQEVDGMEKAGGYMKTLAIGSHENPNVNFVFRNTTNYQLD-QQHQQQQMSQSL 60
           MALANS+V E DGM+KAGGY+K+L I +H+ PN  F+FRNTTNYQLD  Q QQQQ+ QSL
Sbjct: 1   MALANSSVHEADGMDKAGGYIKSLPIATHDTPNATFLFRNTTNYQLDHHQQQQQQLPQSL 60

Query: 61  INFKCGIENLFHKNNNESLLSFEPQGVCQDTYNW-DQQRLMEDPNCFQTATNNYSPAKEN 120
           INFKCGI+N+FHK NNESLLSFEPQGVCQDTYNW D QRLMEDPNCFQTATN YS  KEN
Sbjct: 61  INFKCGIDNIFHK-NNESLLSFEPQGVCQDTYNWDDHQRLMEDPNCFQTATNGYSSPKEN 120

Query: 121 KNGDGSVYEWLYSEPTAVSDGIQEAEPAQEIGNYKRPHMGESSGGVCKKQCT-ATAKKQK 180
           KNGDGSVY+WLYSE T VSDGIQEAE A EI N KRPHMGESSG V KKQCT A AKKQK
Sbjct: 121 KNGDGSVYDWLYSEATGVSDGIQEAEGAHEIANQKRPHMGESSGSVSKKQCTAAAAKKQK 180

Query: 181 PKSSTAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKI 240
           PKSSTAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKI
Sbjct: 181 PKSSTAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKI 240

Query: 241 LATDEFWPVQGGKAPDISQVKEAIDAILSSQRERSSSSNSEK 280
           LATDEFWPVQGGKAPDISQVKEAIDAILSSQRERSSSSNS+K
Sbjct: 241 LATDEFWPVQGGKAPDISQVKEAIDAILSSQRERSSSSNSQK 281

[Close]

BLAST of Lcy09g012460 vs. ExPASy TrEMBL
Match: A0A6J1HFA4 (putative transcription factor bHLH086 OS=Cucurbita moschata OX=3662 GN=LOC111463706 PE=4 SV=1)

HSP 1 Score: 450.7 bits (1158), Expect = 4.5e-123
Identity = 238/285 (83.51%), Postives = 254/285 (89.12%), Query Frame = 0


Query: 1   MALANSAVQEVDGMEKAGGYMKTLAIGSHENPNVNFVFRNTTNYQLD----QQHQQQQMS 60
           MALANS+V E DGM+KAGGY+K++ I +H+ PN  F+FRNTTNYQLD    QQ QQQQ+ 
Sbjct: 1   MALANSSVHEADGMDKAGGYIKSIPIATHDTPNATFLFRNTTNYQLDHHQQQQQQQQQLP 60

Query: 61  QSLINFKCGIENLFHKNNNESLLSFEPQGVCQDTYNW-DQQRLMEDPNCFQTATNNYSPA 120
            SLINFKCGI+++FHK NNESLLSFEPQGVCQDTYNW D QRLMEDPNCFQTATN YS  
Sbjct: 61  HSLINFKCGIDSIFHK-NNESLLSFEPQGVCQDTYNWDDHQRLMEDPNCFQTATNGYSSP 120

Query: 121 KENKNGDGSVYEWLYSEPTAVSDGIQEAEPAQEIGNYKRPHMGESSGGVCKKQCT-ATAK 180
           KENKNGDGSVY+WLYSE + VSD IQEAE A E+ N KRPHMGESSG V KKQCT A AK
Sbjct: 121 KENKNGDGSVYDWLYSEASGVSDAIQEAEGAHEVANQKRPHMGESSGSVSKKQCTAAAAK 180

Query: 181 KQKPKSSTAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQ 240
           KQKPKSSTAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQ
Sbjct: 181 KQKPKSSTAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQ 240

Query: 241 VKILATDEFWPVQGGKAPDISQVKEAIDAILSSQRERSSSSNSEK 280
           VKILATDEFWPVQGGKAPDISQVKEAIDAILSSQRERSSSSNS+K
Sbjct: 241 VKILATDEFWPVQGGKAPDISQVKEAIDAILSSQRERSSSSNSQK 284

[Close]

BLAST of Lcy09g012460 vs. ExPASy TrEMBL
Match: A0A0A0KN55 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G420280 PE=4 SV=1)

HSP 1 Score: 391.3 bits (1004), Expect = 3.3e-105
Identity = 233/296 (78.72%), Postives = 245/296 (82.77%), Query Frame = 0


Query: 1   MALANSAVQEVDGMEK-AGGYMKTLAIG---SHENPNVNFVFRNTTNYQLDQQHQQQQMS 60
           MALANSA+QEVDGMEK  GGY+K+LAIG    H+NPN +FVFR+TTNYQL QQ Q     
Sbjct: 1   MALANSAIQEVDGMEKNGGGYLKSLAIGKGHDHQNPNGDFVFRDTTNYQLGQQQQ----- 60

Query: 61  QSLINFKCGIENLFHKNNNESLLSFEPQGVCQ--DTYNW-DQQRLMEDPNCFQTAT--NN 120
           QSLINF        HK NNESLLSFE QG+CQ   TYNW DQQR+MEDPNCFQTAT  NN
Sbjct: 61  QSLINFG-------HKMNNESLLSFEAQGICQLDLTYNWDDQQRVMEDPNCFQTATNHNN 120

Query: 121 YSPAKE----NKNGD-GSVYEWLYSEPTA-VSDGIQEAEPAQEI-GNYKRPH-MGESSGG 180
           YSP+K+    NKNGD GSVYEWLYSE T   SD IQEAE  QEI  N+KR H  GESSG 
Sbjct: 121 YSPSKDHHHHNKNGDNGSVYEWLYSESTTDFSDSIQEAEGTQEIVPNHKRSHTTGESSGS 180

Query: 181 VCKKQCTATAKKQKPKSSTAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEK 240
           VCKKQCTA  KKQKPKS+TAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEK
Sbjct: 181 VCKKQCTAAPKKQKPKSATAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEK 240

Query: 241 AISYVKFLQLQVKILATDEFWPVQGGKAPDISQVKEAIDAILSSQRERSSSSNSEK 280
           AISYVKFLQLQVKILATDEFWPVQGGKAPDISQVKEAID ILSSQRERSSSSNSEK
Sbjct: 241 AISYVKFLQLQVKILATDEFWPVQGGKAPDISQVKEAIDVILSSQRERSSSSNSEK 284

[Close]

BLAST of Lcy09g012460 vs. ExPASy TrEMBL
Match: A0A1S3CCR8 (putative transcription factor bHLH086 OS=Cucumis melo OX=3656 GN=LOC103499318 PE=4 SV=1)

HSP 1 Score: 375.6 bits (963), Expect = 1.9e-100
Identity = 224/294 (76.19%), Postives = 241/294 (81.97%), Query Frame = 0


Query: 1   MALANSAVQEVDGMEK-AGGYMKTLAIGS--HENPNVNFVFRNTTNYQLDQQHQQQQMSQ 60
           M+LANSA+QEVDGMEK  GGY+K+LAIG    +NPN +FVFR+ TNYQL  Q Q     Q
Sbjct: 1   MSLANSAIQEVDGMEKNGGGYLKSLAIGKGHDQNPNGDFVFRDATNYQLGLQQQ-----Q 60

Query: 61  SLINFKCGIENLFHKNNNESLLSFEPQGVCQ--DTYNW-DQQRLMEDPNCFQTAT--NNY 120
           SLINF        HK NNESLLSFE QG+CQ   TYNW DQ+R+MEDPNCFQTAT  NNY
Sbjct: 61  SLINFG-------HKMNNESLLSFEAQGICQLDLTYNWDDQERVMEDPNCFQTATSHNNY 120

Query: 121 SPAKE---NKNGD-GSVYEWLYSEPTA-VSDGIQEAEPAQEI-GNYKRPH-MGESSGGVC 180
           SP+K+   NKNG+ GSVYEWLY E T   SD IQ+AE  QEI  N+KR H  GESSG VC
Sbjct: 121 SPSKDHHHNKNGNSGSVYEWLYCESTTDFSDSIQDAEGTQEIVPNHKRSHSTGESSGSVC 180

Query: 181 KKQCTATAKKQKPKSSTAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAI 240
           KKQCTA  KKQKPKS+TAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAI
Sbjct: 181 KKQCTAAPKKQKPKSATAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAI 240

Query: 241 SYVKFLQLQVKILATDEFWPVQGGKAPDISQVKEAIDAILSSQRERSSSSNSEK 280
           SYVKFLQLQVKILATDEFWPVQGGKAPDISQVKEAID ILSSQRERSSSSN+EK
Sbjct: 241 SYVKFLQLQVKILATDEFWPVQGGKAPDISQVKEAIDVILSSQRERSSSSNTEK 282

[Close]

BLAST of Lcy09g012460 vs. ExPASy TrEMBL
Match: A0A5A7V5W7 (Putative transcription factor bHLH086 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold154G00940 PE=4 SV=1)

HSP 1 Score: 372.5 bits (955), Expect = 1.6e-99
Identity = 223/294 (75.85%), Postives = 240/294 (81.63%), Query Frame = 0


Query: 1   MALANSAVQEVDGMEK-AGGYMKTLAIGS--HENPNVNFVFRNTTNYQLDQQHQQQQMSQ 60
           M+LANSA+QEVDGMEK  GGY+K+LAIG    +NPN +FVFR+ TNYQL  Q Q     Q
Sbjct: 1   MSLANSAIQEVDGMEKNGGGYLKSLAIGKGHDQNPNGDFVFRDATNYQLGLQQQ-----Q 60

Query: 61  SLINFKCGIENLFHKNNNESLLSFEPQGVCQ--DTYNW-DQQRLMEDPNCFQTAT--NNY 120
           SLINF         K NNESLLSFE QG+CQ   TYNW DQ+R+MEDPNCFQTAT  NNY
Sbjct: 61  SLINFG-------RKMNNESLLSFEAQGICQLDLTYNWDDQERVMEDPNCFQTATSHNNY 120

Query: 121 SPAKE---NKNGD-GSVYEWLYSEPTA-VSDGIQEAEPAQEI-GNYKRPH-MGESSGGVC 180
           SP+K+   NKNG+ GSVYEWLY E T   SD IQ+AE  QEI  N+KR H  GESSG VC
Sbjct: 121 SPSKDHHHNKNGNSGSVYEWLYCESTTDFSDSIQDAEGTQEIVPNHKRSHSTGESSGSVC 180

Query: 181 KKQCTATAKKQKPKSSTAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAI 240
           KKQCTA  KKQKPKS+TAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAI
Sbjct: 181 KKQCTAAPKKQKPKSATAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAI 240

Query: 241 SYVKFLQLQVKILATDEFWPVQGGKAPDISQVKEAIDAILSSQRERSSSSNSEK 280
           SYVKFLQLQVKILATDEFWPVQGGKAPDISQVKEAID ILSSQRERSSSSN+EK
Sbjct: 241 SYVKFLQLQVKILATDEFWPVQGGKAPDISQVKEAIDVILSSQRERSSSSNTEK 282

[Close]

BLAST of Lcy09g012460 vs. NCBI nr
Match: XP_022990966.1 (putative transcription factor bHLH086 [Cucurbita maxima])

HSP 1 Score: 458.8 bits (1179), Expect = 3.4e-125
Identity = 243/282 (86.17%), Postives = 255/282 (90.43%), Query Frame = 0


Query: 1   MALANSAVQEVDGMEKAGGYMKTLAIGSHENPNVNFVFRNTTNYQLD-QQHQQQQMSQSL 60
           MALANS+V E DGM+KAGGY+K+L I +H+ PN  F+FRNTTNYQLD  Q QQQQ+ QSL
Sbjct: 1   MALANSSVHEADGMDKAGGYIKSLPIATHDTPNATFLFRNTTNYQLDHHQQQQQQLPQSL 60

Query: 61  INFKCGIENLFHKNNNESLLSFEPQGVCQDTYNW-DQQRLMEDPNCFQTATNNYSPAKEN 120
           INFKCGI+N+FHK NNESLLSFEPQGVCQDTYNW D QRLMEDPNCFQTATN YS  KEN
Sbjct: 61  INFKCGIDNIFHK-NNESLLSFEPQGVCQDTYNWDDHQRLMEDPNCFQTATNGYSSPKEN 120

Query: 121 KNGDGSVYEWLYSEPTAVSDGIQEAEPAQEIGNYKRPHMGESSGGVCKKQCT-ATAKKQK 180
           KNGDGSVY+WLYSE T VSDGIQEAE A EI N KRPHMGESSG V KKQCT A AKKQK
Sbjct: 121 KNGDGSVYDWLYSEATGVSDGIQEAEGAHEIANQKRPHMGESSGSVSKKQCTAAAAKKQK 180

Query: 181 PKSSTAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKI 240
           PKSSTAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKI
Sbjct: 181 PKSSTAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKI 240

Query: 241 LATDEFWPVQGGKAPDISQVKEAIDAILSSQRERSSSSNSEK 280
           LATDEFWPVQGGKAPDISQVKEAIDAILSSQRERSSSSNS+K
Sbjct: 241 LATDEFWPVQGGKAPDISQVKEAIDAILSSQRERSSSSNSQK 281

[Close]

BLAST of Lcy09g012460 vs. NCBI nr
Match: KAG6602034.1 (putative transcription factor basic helix-loop-helix 86, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 451.8 bits (1161), Expect = 4.2e-123
Identity = 238/282 (84.40%), Postives = 254/282 (90.07%), Query Frame = 0


Query: 1   MALANSAVQEVDGMEKAGGYMKTLAIGSHENPNVNFVFRNTTNYQLD-QQHQQQQMSQSL 60
           MALANS+V E DGM+KAGGY+K++ I +H+ PN  F+FRNTTNYQLD  Q QQQQ+ QSL
Sbjct: 1   MALANSSVHEADGMDKAGGYIKSIPIATHDTPNATFLFRNTTNYQLDHHQQQQQQLPQSL 60

Query: 61  INFKCGIENLFHKNNNESLLSFEPQGVCQDTYNW-DQQRLMEDPNCFQTATNNYSPAKEN 120
           INFKCGI+++FHK NNESLLSFEPQGVCQDTYNW D QRLMEDPNCFQTATN YS  KEN
Sbjct: 61  INFKCGIDSIFHK-NNESLLSFEPQGVCQDTYNWDDHQRLMEDPNCFQTATNGYSSPKEN 120

Query: 121 KNGDGSVYEWLYSEPTAVSDGIQEAEPAQEIGNYKRPHMGESSGGVCKKQCT-ATAKKQK 180
           KNGDGSVY+WLYSE + VSD IQEAE A E+ N KRPHMGESSG V KKQCT A AKKQK
Sbjct: 121 KNGDGSVYDWLYSEASGVSDAIQEAEGAHEVANQKRPHMGESSGSVSKKQCTAAAAKKQK 180

Query: 181 PKSSTAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKI 240
           PKSSTAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKI
Sbjct: 181 PKSSTAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKI 240

Query: 241 LATDEFWPVQGGKAPDISQVKEAIDAILSSQRERSSSSNSEK 280
           LATDEFWPVQGGKAPDISQVKEAIDAILSSQRERSSSSNS+K
Sbjct: 241 LATDEFWPVQGGKAPDISQVKEAIDAILSSQRERSSSSNSQK 281

[Close]

BLAST of Lcy09g012460 vs. NCBI nr
Match: XP_023528222.1 (putative transcription factor bHLH086 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 450.7 bits (1158), Expect = 9.4e-123
Identity = 237/281 (84.34%), Postives = 251/281 (89.32%), Query Frame = 0


Query: 1   MALANSAVQEVDGMEKAGGYMKTLAIGSHENPNVNFVFRNTTNYQLDQQHQQQQMSQSLI 60
           MALANS+V E DGM+KAGGY+K++ I +H+ PN  F+FRNTTNYQLD   QQQQ+ QSLI
Sbjct: 1   MALANSSVHEADGMDKAGGYIKSIPIATHDTPNATFLFRNTTNYQLDHHQQQQQLPQSLI 60

Query: 61  NFKCGIENLFHKNNNESLLSFEPQGVCQDTYNW-DQQRLMEDPNCFQTATNNYSPAKENK 120
           NFKCGI+N+FHK NNESLLSFEPQGV QDTYNW D QRLMEDPNCFQTATN YS  KENK
Sbjct: 61  NFKCGIDNIFHK-NNESLLSFEPQGVGQDTYNWDDHQRLMEDPNCFQTATNGYSSPKENK 120

Query: 121 NGDGSVYEWLYSEPTAVSDGIQEAEPAQEIGNYKRPHMGESSGGVCKKQC-TATAKKQKP 180
           NGDGSVY+WLYSE + VSD IQEAE A EI N KRPHMGESSG V KKQC T  AKKQKP
Sbjct: 121 NGDGSVYDWLYSEASGVSDAIQEAEGAHEIANQKRPHMGESSGSVSKKQCTTVAAKKQKP 180

Query: 181 KSSTAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKIL 240
           KSSTAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKIL
Sbjct: 181 KSSTAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKIL 240

Query: 241 ATDEFWPVQGGKAPDISQVKEAIDAILSSQRERSSSSNSEK 280
           ATDEFWPVQGGKAPDISQVKEAIDAILSSQRERSSSSNS+K
Sbjct: 241 ATDEFWPVQGGKAPDISQVKEAIDAILSSQRERSSSSNSQK 280

[Close]

BLAST of Lcy09g012460 vs. NCBI nr
Match: XP_022963447.1 (putative transcription factor bHLH086 [Cucurbita moschata])

HSP 1 Score: 450.7 bits (1158), Expect = 9.4e-123
Identity = 238/285 (83.51%), Postives = 254/285 (89.12%), Query Frame = 0


Query: 1   MALANSAVQEVDGMEKAGGYMKTLAIGSHENPNVNFVFRNTTNYQLD----QQHQQQQMS 60
           MALANS+V E DGM+KAGGY+K++ I +H+ PN  F+FRNTTNYQLD    QQ QQQQ+ 
Sbjct: 1   MALANSSVHEADGMDKAGGYIKSIPIATHDTPNATFLFRNTTNYQLDHHQQQQQQQQQLP 60

Query: 61  QSLINFKCGIENLFHKNNNESLLSFEPQGVCQDTYNW-DQQRLMEDPNCFQTATNNYSPA 120
            SLINFKCGI+++FHK NNESLLSFEPQGVCQDTYNW D QRLMEDPNCFQTATN YS  
Sbjct: 61  HSLINFKCGIDSIFHK-NNESLLSFEPQGVCQDTYNWDDHQRLMEDPNCFQTATNGYSSP 120

Query: 121 KENKNGDGSVYEWLYSEPTAVSDGIQEAEPAQEIGNYKRPHMGESSGGVCKKQCT-ATAK 180
           KENKNGDGSVY+WLYSE + VSD IQEAE A E+ N KRPHMGESSG V KKQCT A AK
Sbjct: 121 KENKNGDGSVYDWLYSEASGVSDAIQEAEGAHEVANQKRPHMGESSGSVSKKQCTAAAAK 180

Query: 181 KQKPKSSTAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQ 240
           KQKPKSSTAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQ
Sbjct: 181 KQKPKSSTAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQ 240

Query: 241 VKILATDEFWPVQGGKAPDISQVKEAIDAILSSQRERSSSSNSEK 280
           VKILATDEFWPVQGGKAPDISQVKEAIDAILSSQRERSSSSNS+K
Sbjct: 241 VKILATDEFWPVQGGKAPDISQVKEAIDAILSSQRERSSSSNSQK 284

[Close]

BLAST of Lcy09g012460 vs. NCBI nr
Match: XP_038907041.1 (putative transcription factor bHLH086 [Benincasa hispida])

HSP 1 Score: 427.9 bits (1099), Expect = 6.5e-116
Identity = 242/292 (82.88%), Postives = 252/292 (86.30%), Query Frame = 0


Query: 1   MALANSAVQEVDGMEKAGGYMKTLAIG-SHENPNVNFVFRNTTNYQLDQQHQQQQMSQSL 60
           MAL NSAVQEVDGMEK GGY+KTLA G  HENP+ NFVFRNTTNYQLD Q QQQQ  QSL
Sbjct: 1   MALTNSAVQEVDGMEKNGGYLKTLATGKGHENPDGNFVFRNTTNYQLDHQQQQQQQQQSL 60

Query: 61  INFKCGIEN--LFHKNNNESLLSFEPQGVCQ--DTYNW-DQQRLMEDPNCFQTAT--NNY 120
           INFKCGIEN  L HK N+ESLLSFE QG+CQ   TYNW DQQR+MEDPNCFQTAT  NNY
Sbjct: 61  INFKCGIENTILGHKMNSESLLSFEAQGICQLDHTYNWDDQQRVMEDPNCFQTATNHNNY 120

Query: 121 SPAKE--NKNGD-GSVYEWLYSEPTA-VSDGIQEAEPAQE-IGNYKRPHMGESSGGVCKK 180
           SP+K+  NKNGD GSVYEWLYSEPT   SD IQEAE  Q+ I N+KR H GESSG VCKK
Sbjct: 121 SPSKDHHNKNGDNGSVYEWLYSEPTTDFSDAIQEAEATQDIILNHKRSHTGESSGSVCKK 180

Query: 181 QCTATAKKQKPKSSTAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISY 240
           QCTA AKKQK KS T KDPQSIAAKNRRERISERLKILQ+LVPNGSKVDLVTMLEKAISY
Sbjct: 181 QCTAAAKKQKTKSPTTKDPQSIAAKNRRERISERLKILQDLVPNGSKVDLVTMLEKAISY 240

Query: 241 VKFLQLQVKILATDEFWPVQGGKAPDISQVKEAIDAILSSQRERSSSSNSEK 280
           VKFLQLQVKILATDEFWPVQGGKAPDISQVKEAID ILSSQRERSSSSNSEK
Sbjct: 241 VKFLQLQVKILATDEFWPVQGGKAPDISQVKEAIDVILSSQRERSSSSNSEK 292

[Close]

BLAST of Lcy09g012460 vs. TAIR 10
Match: AT5G37800.1 (RHD SIX-LIKE 1 )

HSP 1 Score: 182.6 bits (462), Expect = 4.4e-46
Identity = 129/287 (44.95%), Postives = 170/287 (59.23%), Query Frame = 0


Query: 13  GMEKAGGYMKTLAIGSHENPNVNFVFRNTTNYQLDQQHQQQQMSQSLINFKCGIENLFHK 72
           G+++      +  I S    N  FVF  +     D          SL++F     + F  
Sbjct: 30  GLDEGASASSSSTINSDHQNNQGFVFYPSGETIEDH--------NSLMDFNA--SSFFTF 89

Query: 73  NNNESLLSFEPQGVC------QDTYNWD----------QQRLMEDPNCFQT------ATN 132
           +N+ SL+S    G          +Y++D            R+++ PN F+T       +N
Sbjct: 90  DNHRSLISPVTNGGAFPVVDGNMSYSYDGWSHHQVDSISPRVIKTPNSFETTSSFGLTSN 149

Query: 133 NYS-PAKENKNGDGSVYEWLYSEPTAVSDGIQEAEPAQEIGNYKRPHMGESSGGVCKKQC 192
           + S PA  + NGD     WLYS  T V+ G +    + ++   KRP  GE++  + KK  
Sbjct: 150 SMSKPATNHGNGD-----WLYSGSTIVNIGSRHESTSPKLAGNKRPFTGENT-QLSKKPS 209

Query: 193 TATAKKQKPKSSTA-KDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYV 252
           + T  K KPK++T+ KDPQS+AAKNRRERISERLK+LQELVPNG+KVDLVTMLEKAI YV
Sbjct: 210 SGTNGKIKPKATTSPKDPQSLAAKNRRERISERLKVLQELVPNGTKVDLVTMLEKAIGYV 269

Query: 253 KFLQLQVKILATDEFWPVQGGKAPDISQVKEAIDAILSSQRERSSSS 276
           KFLQ+QVK+LA DEFWP QGGKAPDISQVKEAIDAILSS +  S+S+
Sbjct: 270 KFLQVQVKVLAADEFWPAQGGKAPDISQVKEAIDAILSSSQRDSNST 300

[Close]

BLAST of Lcy09g012460 vs. TAIR 10
Match: AT1G66470.1 (ROOT HAIR DEFECTIVE6 )

HSP 1 Score: 179.1 bits (453), Expect = 4.9e-45
Identity = 102/150 (68.00%), Postives = 120/150 (80.00%), Query Frame = 0


Query: 127 EWLYSEPTAVSDGIQEAEPAQEIGNYKRPHMGESSGGVCKKQCTATAKKQKPKSSTA-KD 186
           +WLYS+ T V+ G +    + +    KR H GES+    KK  +    K KPK +T+ KD
Sbjct: 146 DWLYSDSTVVTTGSRNESLSPKSAGNKRSHTGEST-QPSKKLSSGVTGKTKPKPTTSPKD 205

Query: 187 PQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKILATDEFWP 246
           PQS+AAKNRRERISERLKILQELVPNG+KVDLVTMLEKAISYVKFLQ+QVK+LATDEFWP
Sbjct: 206 PQSLAAKNRRERISERLKILQELVPNGTKVDLVTMLEKAISYVKFLQVQVKVLATDEFWP 265

Query: 247 VQGGKAPDISQVKEAIDAIL-SSQRERSSS 275
            QGGKAPDISQVK+AIDAIL SSQR+R+S+
Sbjct: 266 AQGGKAPDISQVKDAIDAILSSSQRDRNSN 294

[Close]

BLAST of Lcy09g012460 vs. TAIR 10
Match: AT1G27740.1 (root hair defective 6-like 4 )

HSP 1 Score: 89.4 bits (220), Expect = 5.1e-18
Identity = 45/79 (56.96%), Postives = 60/79 (75.95%), Query Frame = 0


Query: 166 KKQCTATAKKQKPKSSTAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAI 225
           K   T+   K +    TA DPQS+ A+ RRE+I+ERLK LQ LVPNG+KVD+ TMLE+A+
Sbjct: 157 KASVTSVKGKTRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKVDISTMLEEAV 216

Query: 226 SYVKFLQLQVKILATDEFW 245
            YVKFLQLQ+K+L++D+ W
Sbjct: 217 HYVKFLQLQIKLLSSDDLW 235

[Close]

BLAST of Lcy09g012460 vs. TAIR 10
Match: AT2G14760.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 89.0 bits (219), Expect = 6.7e-18
Identity = 43/70 (61.43%), Postives = 57/70 (81.43%), Query Frame = 0


Query: 175 KQKPKSSTAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQ 234
           K +     A DPQS+ A+ RRERI+ERL+ILQ LVPNG+KVD+ TMLE+A+ YVKFLQLQ
Sbjct: 236 KTRASRGAATDPQSLYARKRRERINERLRILQHLVPNGTKVDISTMLEEAVQYVKFLQLQ 295

Query: 235 VKILATDEFW 245
           +K+L++D+ W
Sbjct: 296 IKLLSSDDLW 305

[Close]

BLAST of Lcy09g012460 vs. TAIR 10
Match: AT4G33880.1 (ROOT HAIR DEFECTIVE 6-LIKE 2 )

HSP 1 Score: 88.6 bits (218), Expect = 8.7e-18
Identity = 43/70 (61.43%), Postives = 57/70 (81.43%), Query Frame = 0


Query: 175 KQKPKSSTAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQ 234
           K +     A DPQS+ A+ RRERI+ERL+ILQ LVPNG+KVD+ TMLE+A+ YVKFLQLQ
Sbjct: 265 KTRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQ 324

Query: 235 VKILATDEFW 245
           +K+L++D+ W
Sbjct: 325 IKLLSSDDLW 334

The following BLAST results are available for this feature:

BLAST of Lcy09g012460 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FJ00	6.2e-45	44.95	Putative transcription factor bHLH086 OS=Arabidopsis thaliana OX=3702 GN=RSL1 PE...	[more]
Q9C707	6.9e-44	68.00	Transcription factor RHD6 OS=Arabidopsis thaliana OX=3702 GN=RHD6 PE=1 SV=1	[more]
Q8LEG1	7.2e-17	56.96	Transcription factor RSL3 OS=Arabidopsis thaliana OX=3702 GN=RSL4 PE=1 SV=1	[more]
Q7XHI9	9.4e-17	61.43	Transcription factor bHLH84 OS=Arabidopsis thaliana OX=3702 GN=BHLH84 PE=1 SV=1	[more]
Q84WK0	1.2e-16	61.43	Transcription factor RSL2 OS=Arabidopsis thaliana OX=3702 GN=RSL2 PE=2 SV=1	[more]

BLAST of Lcy09g012460 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JPE9	1.7e-125	86.17	putative transcription factor bHLH086 OS=Cucurbita maxima OX=3661 GN=LOC11148770...	[more]
A0A6J1HFA4	4.5e-123	83.51	putative transcription factor bHLH086 OS=Cucurbita moschata OX=3662 GN=LOC111463...	[more]
A0A0A0KN55	3.3e-105	78.72	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G420280 PE=4 S...	[more]
A0A1S3CCR8	1.9e-100	76.19	putative transcription factor bHLH086 OS=Cucumis melo OX=3656 GN=LOC103499318 PE...	[more]
A0A5A7V5W7	1.6e-99	75.85	Putative transcription factor bHLH086 OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]

BLAST of Lcy09g012460 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022990966.1	3.4e-125	86.17	putative transcription factor bHLH086 [Cucurbita maxima]	[more]
KAG6602034.1	4.2e-123	84.40	putative transcription factor basic helix-loop-helix 86, partial [Cucurbita argy...	[more]
XP_023528222.1	9.4e-123	84.34	putative transcription factor bHLH086 [Cucurbita pepo subsp. pepo]	[more]
XP_022963447.1	9.4e-123	83.51	putative transcription factor bHLH086 [Cucurbita moschata]	[more]
XP_038907041.1	6.5e-116	82.88	putative transcription factor bHLH086 [Benincasa hispida]	[more]

BLAST of Lcy09g012460 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G37800.1	4.4e-46	44.95	RHD SIX-LIKE 1	[more]
AT1G66470.1	4.9e-45	68.00	ROOT HAIR DEFECTIVE6	[more]
AT1G27740.1	5.1e-18	56.96	root hair defective 6-like 4	[more]
AT2G14760.1	6.7e-18	61.43	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G33880.1	8.7e-18	61.43	ROOT HAIR DEFECTIVE 6-LIKE 2	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 188..237 e-value: 1.0E-11 score: 54.9
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 190..232 e-value: 8.5E-8 score: 32.1
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 182..231 score: 15.294162
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 175..239 e-value: 2.5E-11 score: 45.3
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 180..241
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 174..188
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 156..195
None	No IPR available	PANTHER	PTHR16223:SF9	TRANSCRIPTION FACTOR BHLH83-RELATED	coord: 27..268
None	No IPR available	PANTHER	PTHR16223	TRANSCRIPTION FACTOR BHLH83-RELATED	coord: 27..268
None	No IPR available	CDD	cd11454	bHLH_AtIND_like	coord: 183..245 e-value: 6.76276E-37 score: 123.656

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy09g012460.1	Lcy09g012460.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding